RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CMBL (Homo sapiens)

Ensembl gene IDs: ENSG00000164237

Ensembl transcript IDs: ENST00000296658.4, ENST00000503834.1, ENST00000506224.1, ENST00000506821.1, ENST00000510532.5, ENST00000511963.5, ENST00000514202.1

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCCAGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTaGGGCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCT +
Preference number: 1 (lower is better)
Translates to: SPAHLRGFLGGRMNV*GLLGAALSRQGLWP
Trigger: AGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 90 bp ACGGCAAAAGCCCAGCACATCTCAGGGGTTTCCTGGGAGGCCGGATaGATGTGTGAGGCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: TAKAQHISGVSWEAG*MCEASWEQPSAGKG
Trigger: GCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCTGGGCTTTTGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CCA 90 bp AGGCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTaGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGCTCAGG +
Preference number: 1 (lower is better)
Translates to: RPPGSSPQQARALAC*GPQLSVHSRPALLR
Trigger: CCTGAGCAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 90 bp AACCGCCTCCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTaGTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCC +
Preference number: 1 (lower is better)
Translates to: NRLLGPPSHGQLDTT*LTCPTDPHTHMDHA
Trigger: GGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGGAGGCGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CCA 90 bp ATCAGGCCGTCTGTGAGGTCAAAGAAGGATCCCATGAAAGGCACATaGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: IRPSVRSKKDPMKGT*ETPTTTSPGSPSGQ
Trigger: CTGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGACCTCACAGACGGCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 90 bp CGGCTCTCCCCTTTACGCCACCACCAGAAACACAGGAGATATTTCTaGGGTAGCCTCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGA +
Preference number: 1 (lower is better)
Translates to: RLSPLRHHQKHRRYF*GSLRPWDPKMPVLG
Trigger: TCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGAGGCTACCTCAGAAATATCTCCTGTGTTTCTGGTGGTGGCGTAAAGGGGAGAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 90 bp GCCTCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTaGTTAGGAGACAACAGCTGGGTGACAACTCTAGCCCACCGTTCT +
Preference number: 1 (lower is better)
Translates to: ASGPGTQKCQCLEIH*LGDNSWVTTLAHRS
Trigger: AGAACGGTGGGCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 90 bp AAGTCACTTGCCCAAAGTCACATGTACGCACCCCGTAGGTGCAGGTaGAGAGTTTCTCACCGGCTCTCCCCTTTACGCCACCACCAGAAA +
Preference number: 1 (lower is better)
Translates to: KSLAQSHMYAPRRCR*RVSHRLSPLRHHQK
Trigger: TTTCTGGTGGTGGCGTAAAGGGGAGAGCCGGTGAGAAACTCTGCACCTGCACCTACGGGGTGCGTACATGTGACTTTGGGCAAGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 90 bp CAGAACACCATGACATTTGACCAAAGGACTCAGCAGAGGGAAGGCTaGCCAGGCCCCAAGCTCACCATGAAGGATACAGCCACACCCTTG +
Preference number: 1 (lower is better)
Translates to: QNTMTFDQRTQQREG*PGPKLTMKDTATPL
Trigger: CAAGGGTGTGGCTGTATCCTTCATGGTGAGCTTGGGGCCTGGGCAGCCTTCCCTCTGCTGAGTCCTTTGGTCAAATGTCATGGTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CCA 90 bp AAGGCTTTGGCTCATAGCTCCCTCTCTCTCTCGTTCTCCACCTTCTaGTTGAGCCCATGTGTCCTGAATGGCTCCCCCTTTTTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: KALAHSSLSLSFSTF*LSPCVLNGSPFLLA
Trigger: GGCCAGCAAAAAGGGGGAGCCATTCAGGACACATGGGCTCAACCAGAAGGTGGAGAACGAGAGAGAGAGGGAGCTATGAGCCAAAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 90 bp ACCCTTGGTTCATTCTCGCACGAATTTCAGACCTCCCACCTATGTTaGAGACTCTGGCTACTGGCCACATGCTCACCGACACCGTTCCAC +
Preference number: 1 (lower is better)
Translates to: TLGSFSHEFQTSHLC*RLWLLATCSPTPFH
Trigger: GTGGAACGGTGTCGGTGAGCATGTGGCCAGTAGCCAGAGTCTTCAACATAGGTGGGAGGTCTGAAATTCGTGCGAGAATGAACCAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 90 bp TTATACAACTTCTCACTGTTCCCCAAGGTGGTCGATCCAGACATCTaGCTTACAAAACCGCCTCCTGGGACCACCTTCCCATGGACAGCT +
Preference number: 1 (lower is better)
Translates to: LYNFSLFPKVVDPDI*LTKPPPGTTFPWTA
Trigger: AGCTGTCCATGGGAAGGTGGTCCCAGGAGGCGGTTTTGTAAGGCAGATGTCTGGATCGACCACCTTGGGGAACAGTGAGAAGTTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 90 bp GATATTTCTGAGGTAGCCTCAGGCCCTGGGACCCAAAAATGCCAGTaGTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACT +
Preference number: 1 (lower is better)
Translates to: DISEVASGPGTQKCQ*LEIHCLGDNSWVTT
Trigger: AGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGAGGCTACCTCAGAAATATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 90 bp TATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCTATaGTGTGTTCAAAGACCAGAAAAGGCCACACTTGACCTGTCAGCT +
Preference number: 1 (lower is better)
Translates to: YSSCSSWLCSICHFL*CVQRPEKATLDLSA
Trigger: AGCTGACAGGTCAAGTGTGGCCTTTTCTGGTCTTTGAACACATCATAGAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 90 bp GAATGTGTGAGGCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTaGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCC +
Preference number: 2 (lower is better)
Translates to: ECVRPPGSSPQQARA*ACWGPQLSVHSRPA
Trigger: GGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGCCTCACACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGACTCCTGACCTCAGGTaGTCCACCCACTTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: STSQGFPGRPDECVRPPGTPDLR*STHFGL
Trigger: GAGGCCAAAGTGGGTGGATCACCTGAGGTCAGGAGT...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR GCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGTGGCCCTGTGAAGCGTaGTGCCCTCTGTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: STSQGFPGRPDECVRPPGWPCEA*CPLFSG
Trigger: TCCAGAGAACAGAGGGCAGCACGCTTCACAGGGCCA...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCCACCTGGCCACAGGTTaGACACTCAGGAATCAGGCC +
Preference number: 2 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIHLATG*TLRNQA
Trigger: GGCCTGATTCCTGAGTGTCCAACCTGTGGCCAGGTG...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCTTTTTGCTGGCCCTGTaGAGCGTGCTGCCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIFLLAL*SVLPSV
Trigger: AACAGAGGGCAGCACGCTTCACAGGGCCAGCAAAAA...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR GCA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACCCCCGTAGGTGCAGGTaGAGAGTTTCTCACCGGCTC +
Preference number: 2 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYPRRCR*RVSHRL
Trigger: GAGCCGGTGAGAAACTCTGCACCTGCACCTACGGGG...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACTCGTTCTCCACCTTCTaGTTGAGCCCATGTGTCCTG +
Preference number: 2 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHSFSTF*LSPCVL
Trigger: CAGGACACATGGGCTCAACCAGAAGGTGGAGAACGA...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 90 bp GGCTGCCCAGGCCCCAAGCTCACCATGAAGGATACAGCCACACCCTaGGTTCATTCTCGCACGAATTTCAGACCTCCCACCTATGTTGAA +
Preference number: 2 (lower is better)
Translates to: GCPGPKLTMKDTATP*VHSRTNFRPPTYVE
Trigger: TTCAACATAGGTGGGAGGTCTGAAATTCGTGCGAGAATGAACCAAGGGTGTGGCTGTATCCTTCATGGTGAGCTTGGGGCCTGGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR GCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACTGCTTGGAAATCCACTaGTTAGGAGACAACAGCTGG +
Preference number: 2 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHCLEIH*LGDNSW
Trigger: CCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCA...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 90 bp CACCCTTGGTTCATTCTCGCACGAATTTCAGACCTCCCACCTATGTaGAAGACTCTGGCTACTGGCCACATGCTCACCGACACCGTTCCA +
Preference number: 2 (lower is better)
Translates to: HPWFILARISDLPPM*KTLATGHMLTDTVP
Trigger: TGGAACGGTGTCGGTGAGCATGTGGCCAGTAGCCAGAGTCTTCAACATAGGTGGGAGGTCTGAAATTCGTGCGAGAATGAACCAAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACCCTCCTGGGTTCTATTaGTTCTTGTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYPPGFY*FLCLSL
Trigger: GAGGCTGAGGCACAAGAATCAATAGAACCCAGGAGG...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCATCCTCCTCAGACTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPSSSDS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGTCTGAGGAGGA...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACGATAAGTGTCTAAGCTaGGCAGTTAGTCTACCCGTT +
Preference number: 2 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHDKCLS*AVSLPV
Trigger: AACGGGTAGACTAACTGCCCAGCTTAGACACTTATC...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 90 bp ATTTCTGAGGTAGCCTCAGGCCCTGGGACCCAAAAATGCCAGTGCTaGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTA +
Preference number: 2 (lower is better)
Translates to: ISEVASGPGTQKCQC*EIHCLGDNSWVTTL
Trigger: TAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGAGGCTACCTCAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACTTTCCAAGCAAATTTTaGGATGAAAGCTATTCTAGG +
Preference number: 2 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHFPSKF*DESYSR
Trigger: CCTAGAATAGCTTTCATCCCAAAATTTGCTTGGAAA...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCGCCTCCAGGTTCAAGTaGTTCTCCTCCTCAGACTCC +
Preference number: 2 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFASRFK*FSSSDS
Trigger: GGAGTCTGAGGAGGAGAATCACTTGAACCTGGAGGC...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR GCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCTTGTCCAGGCTGGAGTaGAGTAGCGCAACCTCGACT +
Preference number: 2 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFLSRLE*SSATST
Trigger: AGTCGAGGTTGCGCTACTGCACTCCAGCCTGGACAA...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR GCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATCCCTGTGAAGCGTGCTaGCCTCTGTTCTCTGGATCT +
Preference number: 2 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYPCEAC*PLFSGS
Trigger: AGATCCAGAGAACAGAGGGCAGCACGCTTCACAGGG...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATAGAAAAGGCCACACTTaGCCTGTCAGCTGGTCCTTG +
Preference number: 2 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYRKGHT*PVSWSL
Trigger: CAAGGACCAGCTGACAGGTCAAGTGTGGCCTTTTCT...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR TCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATTGGACACAGGTCAGATaGGAGCCACAAGGTCATGTG +
Preference number: 2 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYWTQVR*EPQGHV
Trigger: CACATGACCTTGTGGCTCTCATCTGACCTGTGTCCA...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 90 bp CAGATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTaGAATTTTATGTTTCCTGAGCATCTATTTGAATGTAAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: QMQKLRLRKLKFGNS*NFMFPEHLFECKLD
Trigger: GTCCAACTTACATTCAAATAGATGCTCAGGAAACATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATATGAGGCACTACACCTaGTCAGACCTTGTTTTTAAA +
Preference number: 2 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYMRHYT*SDLVFK
Trigger: TTTAAAAACAAGGTCTGACCAGGTGTAGTGCCTCAT...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp CATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTaGGGCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGG +
Preference number: 3 (lower is better)
Translates to: HLRGFLGGRMNV*GLLGAALSRQG
Trigger: CCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp GCCCAGCACATCTCAGGGGTTTCCTGGGAGGCCGGATaGATGTGTGAGGCCTCCTGGGAGCAGCCCTCAGCA +
Preference number: 3 (lower is better)
Translates to: AQHISGVSWEAG*MCEASWEQPSA
Trigger: TGCTGAGGGCTGCTCCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACAACACCTGGCCACAGGTaGGACACTCAGGAATCAGGC +
Preference number: 3 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTTPGHR*DTQESG
Trigger: GCCTGATTCCTGAGTGTCCAACCTGTGGCCAGGTGT...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACATTCTCCACCTTCTGGTaGAGCCCATGTGTCCTGAAT +
Preference number: 3 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTFSTFW*SPCVLN
Trigger: ATTCAGGACACATGGGCTCAACCAGAAGGTGGAGAA...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGCTGGATACCACCTGCTaGACTTGTCCCACTGACCCC +
Preference number: 3 (lower is better)
Translates to: STSQGFPGRPDECVRPPGLDTTC*TCPTDP
Trigger: GGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAG...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp GACCACCTTCCCATGGACAGCTGGATACCACCTGCTTaGCTTGTCCCACTGACCCCCACACCCACATGGACC +
Preference number: 3 (lower is better)
Translates to: DHLPMDSWIPPA*LVPLTPTPTWT
Trigger: GGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp GCCCAAAGTCACATGTACGCACCCCGTAGGTGCAGGTaGAGAGTTTCTCACCGGCTCTCCCCTTTACGCCAC +
Preference number: 3 (lower is better)
Translates to: AQSHMYAPRRCR*RVSHRLSPLRH
Trigger: GTGGCGTAAAGGGGAGAGCCGGTGAGAAACTCTGCACCTGCACCTACGGGGTGCGTACATGTGACTTTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp CTGGGACCACCTTCCCATGGACAGCTGGATACCACCTaGTTGACTTGTCCCACTGACCCCCACACCCACATG +
Preference number: 3 (lower is better)
Translates to: LGPPSHGQLDTT*LTCPTDPHTHM
Trigger: CATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp AGCAGAGGGAAGGCTGCCCAGGCCCCAAGCTCACCATaGAGGATACAGCCACACCCTTGGTTCATTCTCGCA +
Preference number: 3 (lower is better)
Translates to: SRGKAAQAPSSP*RIQPHPWFILA
Trigger: TGCGAGAATGAACCAAGGGTGTGGCTGTATCCTTCATGGTGAGCTTGGGGCCTGGGCAGCCTTCCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp TGGACAGCTGGATACCACCTGCTTGACTTGTCCCACTaGCCCCCACACCCACATGGACCATGCCGATATCCT +
Preference number: 3 (lower is better)
Translates to: WTAGYHLLDLSH*PPHPHGPCRYP
Trigger: AGGATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CCA 72 bp TGCCTTACAAAACCGCCTCCTGGGACCACCTTCCCATaGACAGCTGGATACCACCTGCTTGACTTGTCCCAC +
Preference number: 3 (lower is better)
Translates to: CLTKPPPGTTFP*TAGYHLLDLSH
Trigger: GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGGAGGCGGTTTTGTAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGCAGAAAAGGCCACACTaGACCTGTCAGCTGGTCCTT +
Preference number: 3 (lower is better)
Translates to: RALACWGPQLSVHSRPALQKRPH*TCQLVL
Trigger: AAGGACCAGCTGACAGGTCAAGTGTGGCCTTTTCTG...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp TGTGTCCTGAATGGCTCCCCCTTTTTGCTGGCCCTGTaGAGCGTGCTGCCCTCTGTTCTCTGGATCTGTAAG +
Preference number: 3 (lower is better)
Translates to: CVLNGSPFLLAL*SVLPSVLWICK
Trigger: CTTACAGATCCAGAGAACAGAGGGCAGCACGCTTCACAGGGCCAGCAAAAAGGGGGAGCCATTCAGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp GAGGTAGCCTCAGGCCCTGGGACCCAAAAATGCCAGTaGTTGGAAATCCACTGCTTAGGAGACAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: EVASGPGTQKCQ*LEIHCLGDNSW
Trigger: CCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGAGGCTACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp TTCTCACTGTTCCCCAAGGTGGTCGATCCAGACATCTaGCTTACAAAACCGCCTCCTGGGACCACCTTCCCA +
Preference number: 3 (lower is better)
Translates to: FSLFPKVVDPDI*LTKPPPGTTFP
Trigger: TGGGAAGGTGGTCCCAGGAGGCGGTTTTGTAAGGCAGATGTCTGGATCGACCACCTTGGGGAACAGTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CCA 72 bp TCTGTGAGGTCAAAGAAGGATCCCATGAAAGGCACATaGGAAACACCCACGACCACATCCCCAGGATCCCCG +
Preference number: 3 (lower is better)
Translates to: SVRSKKDPMKGT*ETPTTTSPGSP
Trigger: CGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGACCTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACAACACCTGGTCAGACCTaGTTTTTAAATTATGATTCG +
Preference number: 3 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTTPGQT*FLNYDS
Trigger: CGAATCATAATTTAAAAACAAGGTCTGACCAGGTGT...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp CCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTaGTTAGGAGACAACAGCTGGGTGACAACTCTAGCC +
Preference number: 3 (lower is better)
Translates to: PGTQKCQCLEIH*LGDNSWVTTLA
Trigger: GGCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp ATGGCTCCCCCTTTTTGCTGGCCCTGTGAAGCGTGCTaGCCTCTGTTCTCTGGATCTGTAAGCAATAAACTG +
Preference number: 3 (lower is better)
Translates to: MAPPFCWPCEAC*PLFSGSVSNKL
Trigger: CAGTTTATTGCTTACAGATCCAGAGAACAGAGGGCAGCACGCTTCACAGGGCCAGCAAAAAGGGGGAGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCACCTCCTGGGTTCTATaGATTCTTGTGCCTCAGCCT +
Preference number: 3 (lower is better)
Translates to: RESGCLSRNKLDTGQMRATSWVL*ILVPQP
Trigger: AGGCTGAGGCACAAGAATCAATAGAACCCAGGAGGT...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCAGTAGTGGCACAATCTaGGCTCACTGCAGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSSSGTI*AHCSLH
Trigger: GTGGAGACTGCAGTGAGCCAAGATTGTGCCACTACT...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGCAAAAATGCCAGTGCTaGGAAATCCACTGCTTAGGA +
Preference number: 3 (lower is better)
Translates to: RALACWGPQLSVHSRPALQKCQC*EIHCLG
Trigger: TCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTG...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp TCATTCTCGCACGAATTTCAGACCTCCCACCTATGTTaGAGACTCTGGCTACTGGCCACATGCTCACCGACA +
Preference number: 3 (lower is better)
Translates to: SFSHEFQTSHLC*RLWLLATCSPT
Trigger: TGTCGGTGAGCATGTGGCCAGTAGCCAGAGTCTTCAACATAGGTGGGAGGTCTGAAATTCGTGCGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGATGTTCTTCATGGCTTaGCAGCATTTGTCACTTTCT +
Preference number: 3 (lower is better)
Translates to: RALACWGPQLSVHSRPALMFFMA*QHLSLS
Trigger: AGAAAGTGACAAATGCTGCAAAGCCATGAAGAACAT...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGTTCCTGAGCATCTATTaGAATGTAAGTTGGACTTTC +
Preference number: 3 (lower is better)
Translates to: RALACWGPQLSVHSRPALFLSIY*NVSWTF
Trigger: GAAAGTCCAACTTACATTCAAATAGATGCTCAGGAA...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR GCA 72 bp AGGCTAGAGTACAGTAGTGGCACAATCTTGGCTCACTaGAGTCTCCACCTCCTGGGTTCTATTGATTCTTGT +
Preference number: 3 (lower is better)
Translates to: RLEYSSGTILAH*SLHLLGSIDSC
Trigger: ACAAGAATCAATAGAACCCAGGAGGTGGAGACTGCAGTGAGCCAAGATTGTGCCACTACTGTACTCTAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR TCA 72 bp TGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCTATaGTGTGTTCAAAGACCAGAAAAGGCCACACTTGAC +
Preference number: 3 (lower is better)
Translates to: CSSWLCSICHFL*CVQRPEKATLD
Trigger: GTCAAGTGTGGCCTTTTCTGGTCTTTGAACACATCATAGAAAGTGACAAATGCTGCAAAGCCATGAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR-3UTR CAA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATCAATGGAATCCTGTTTaGATCTCAATACTTCCCATA +
Preference number: 3 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYQWNPV*ISILPI
Trigger: TATGGGAAGTATTGAGATCAAAACAGGATTCCATTG...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGGCTTGTCCCGCGGCCTaGGACTGCGCTGCACCGCGC +
Preference number: 4 (lower is better)
Translates to: RALACWGPQLSVHSRPALACPAA*DCAAPR
Trigger: GCGCGGTGCAGCGCAGTCTCAGGCCGCGGGACAAGC...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACACTTGACTTGTCCCACTaGCCCCCACACCCACATGGA +
Preference number: 4 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTLDLSH*PPHPHG
Trigger: TCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAG...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACAGCCCCAAGCTCACCATaGAGGATACAGCCACACCCT +
Preference number: 4 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTAPSSP*RIQPHP
Trigger: AGGGTGTGGCTGTATCCTTCATGGTGAGCTTGGGGC...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGAGGACGCGGGGATCCTaGGGGACCAGTGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: STSQGFPGRPDECVRPPGRTRGS*GTSGSS
Trigger: ACTGGAGCCACTGGTCCCGCAGGATCCCCGCGTCCT...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACGGCCGGATGAATGTGTaGGGCCTCCTGGGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHGRMNV*GLLGAA
Trigger: GGCTGCTCCCAGGAGGCCTCACACATTCATCCGGCC...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACAAGGGCTTTGGCCTGTTaGGGTCCACAACTAAGTGTC +
Preference number: 4 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTRALAC*GPQLSV
Trigger: GACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 72 bp AGGCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTaGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: RPPGSSPQQARA*ACWGPQLSVHS
Trigger: ACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACCCCCGTAGGTGCAGGTaGAGAGTTTCTCACCGGCTC +
Preference number: 4 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHPRRCR*RVSHRL
Trigger: GAGCCGGTGAGAAACTCTGCACCTGCACCTACGGGG...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCACACCTGGCCACAGGTTaGACACTCAGGAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: ERHMGNTHDHIPRIPVRAHLATG*TLRNQA
Trigger: GGCCTGATTCCTGAGTGTCCAACCTGTGGCCAGGTG...TGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 72 bp GGACCACCTTCCCATGGACAGCTGGATACCACCTGCTaGACTTGTCCCACTGACCCCCACACCCACATGGAC +
Preference number: 4 (lower is better)
Translates to: GPPSHGQLDTTC*TCPTDPHTHMD
Trigger: GTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCATTTTTGCTGGCCCTGTaGAGCGTGCTGCCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ERHMGNTHDHIPRIPVRAFLLAL*SVLPSV
Trigger: AACAGAGGGCAGCACGCTTCACAGGGCCAGCAAAAA...TGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACCCAGTCGTAGCCTCCTaGGAGAGCCAAGCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYPVVAS*ESQARR
Trigger: CCTCCGGGCTTGGCTCTCCCAGGAGGCTACGACTGG...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCACTCTCAGTCACAGCGTaGGTCCCCGGGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPLSVTA*VPGAHA
Trigger: GGCATGAGCCCCGGGGACTCACGCTGTGACTGAGAG...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGTGGCCCTGTGAAGCGTaGTGCCCTCTGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RALACWGPQLSVHSRPALWPCEA*CPLFSG
Trigger: TCCAGAGAACAGAGGGCAGCACGCTTCACAGGGCCA...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACAGATAAGTGTCTAAGCTaGGCAGTTAGTCTACCCGTT +
Preference number: 4 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTDKCLS*AVSLPV
Trigger: AACGGGTAGACTAACTGCCCAGCTTAGACACTTATC...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCATCGTTCTCCACCTTCTaGTTGAGCCCATGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ERHMGNTHDHIPRIPVRASFSTF*LSPCVL
Trigger: CAGGACACATGGGCTCAACCAGAAGGTGGAGAACGA...TGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGTTGTCCAGGCTGGAGTaGAGTAGCGCAACCTCGACT +
Preference number: 4 (lower is better)
Translates to: RALACWGPQLSVHSRPALLSRLE*SSATST
Trigger: AGTCGAGGTTGCGCTACTGCACTCCAGCCTGGACAA...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCTACGCACCCCGTAGGTaGAGGTGCAGAGTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIYAPRR*RCRVSH
Trigger: GTGAGAAACTCTGCACCTGCACCTACGGGGTGCGTA...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCAATGTGTGAGGCCTCCTaGGAGCAGCCCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPMCEAS*EQPSAG
Trigger: GCCTGCTGAGGGCTGCTCCCAGGAGGCCTCACACAT...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCTTGATGTGCTCGACTTaGACTTCACGGCCTAGCCCT +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADILMCST*TSRPSP
Trigger: AGGGCTAGGCCGTGAAGTTCAAGTCGAGCACATCAA...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCTGGATACCACCTGCTTaGCTTGTCCCACTGACCCCC +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRAWIPPA*LVPLTP
Trigger: GGGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCA...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCAGACAGATGCAAAAACTaGGGCTCAGGAAGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: ERHMGNTHDHIPRIPVRADRCKN*GSGSSS
Trigger: ACTTGAGCTTCCTGAGCCTCAGTTTTTGCATCTGTC...TGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACACTATATATCTGGTATTaGGCAACTGCCAGCCAAATA +
Preference number: 4 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTLYIWY*ATASQI
Trigger: TATTTGGCTGGCAGTTGCCCAATACCAGATATATAG...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 72 bp GGCCCCAAGCTCACCATGAAGGATACAGCCACACCCTaGGTTCATTCTCGCACGAATTTCAGACCTCCCACC +
Preference number: 4 (lower is better)
Translates to: GPKLTMKDTATP*VHSRTNFRPPT
Trigger: GGTGGGAGGTCTGAAATTCGTGCGAGAATGAACCAAGGGTGTGGCTGTATCCTTCATGGTGAGCTTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCCGGACACCCCTGCCCTaGATTCTGAGTATTTCATCA +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIRTPLP*ILSISS
Trigger: TGATGAAATACTCAGAATTCAGGGCAGGGGTGTCCG...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp TCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTGCTTAGGAGACGGGCTTGTCTGCAGGTaGGCAATCTTCTCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: SGPGTQKCQCLEIHCLGDGLVCR*AIFSLP
Trigger: CGGAAGAGAGAAGATTGCTCACCTGCAGACAAGCCC...GTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCTCCTCCTCAGACTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRASSSDS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGTCTGAGGAGGA...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACCACAGGAGATATTTCTaGGGTAGCCTCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYHRRYF*GSLRPW
Trigger: CCAGGGCCTGAGGCTACCTCAGAAATATCTCCTGTG...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACCTCCCCATACCCATTTaGCAGATGCAAAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHLPIPI*QMQKLR
Trigger: CCTCAGTTTTTGCATCTGTCAAATGGGTATGGGGAG...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCCCCTGTGAAGCGTGCTaGCCTCTGTTCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRAPCEAC*PLFSGS
Trigger: AGATCCAGAGAACAGAGGGCAGCACGCTTCACAGGG...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCGTCGATCCAGACATCTaGCTTACAAAACCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIVDPDI*LTKPPP
Trigger: AGGAGGCGGTTTTGTAAGGCAGATGTCTGGATCGAC...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCATGTCAGCTATATATCTaGTATTGGGCAACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERHMGNTHDHIPRIPVRACQLYI*YWATAS
Trigger: GCTGGCAGTTGCCCAATACCAGATATATAGCTGACA...TGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCGGTAGCCTCAGGCCCTaGGACCCAAAAATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSGSLRP*DPKMPV
Trigger: CACTGGCATTTTTGGGTCCCAGGGCCTGAGGCTACC...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGATACAGCCACACCCTTaGTTCATTCTCGCACGAATT +
Preference number: 4 (lower is better)
Translates to: STSQGFPGRPDECVRPPGIQPHP*FILARI
Trigger: AATTCGTGCGAGAATGAACCAAGGGTGTGGCTGTAT...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 72 bp CATAGCTCCCTCTCTCTCTCGTTCTCCACCTTCTGGTaGAGCCCATGTGTCCTGAATGGCTCCCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: HSSLSLSFSTFW*SPCVLNGSPFL
Trigger: CAAAAAGGGGGAGCCATTCAGGACACATGGGCTCAACCAGAAGGTGGAGAACGAGAGAGAGAGGGAGCTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGTATTTCATCATCAAATaGTGGACAGCAGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: STSQGFPGRPDECVRPPGYFIIK*WTAVPP
Trigger: GGGTGGAACTGCTGTCCATCATTTGATGATGAAATA...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCTGGACACAGGTCAGATaGGAGCCACAAGGTCATGTG +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRAWTQVR*EPQGHV
Trigger: CACATGACCTTGTGGCTCTCATCTGACCTGTGTCCA...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACAGCTTCGTTAGCCATTaGAGAGATTTAAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHSFVSH*RDLSRA
Trigger: AGCCCGACTTAAATCTCTGCAATGGCTAACGAAGCT...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCAATCACAGCTTTGCCTaGATCAACGGGGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADINHSFA*INGGFG
Trigger: ACCAAATCCCCCGTTGATGCAGGCAAAGCTGTGATT...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCACAGTAGACCAGCCCTaGTCAGGCTTGGATTCTCTC +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRATVDQP*SGLDSL
Trigger: GAGAGAATCCAAGCCTGAGCAGGGCTGGTCTACTGT...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGCAATTAAATTCCTTCTaGCCTCGTCAATGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: STSQGFPGRPDECVRPPGQLNSF*PRQCRA
Trigger: AGCCCTACATTGACGAGGCCAGAAGGAATTTAATTG...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCACCCCCACACCCACATaGACCATGCCGATATCCTAC +
Preference number: 4 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSTPTPT*TMPISY
Trigger: GTAGGATATCGGCATGGTCCATGTGGGTGTGGGGGT...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCCCTCCTGGGTTCTATTaGTTCTTGTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSPPGFY*FLCLSL
Trigger: GAGGCTGAGGCACAAGAATCAATAGAACCCAGGAGG...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCAAGAAAAGGCCACACTTaGCCTGTCAGCTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPRKGHT*PVSWSL
Trigger: CAAGGACCAGCTGACAGGTCAAGTGTGGCCTTTTCT...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGGGGAAGAGAAATCTaGAAAGTCGGGGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPGGREI*KVGEGK
Trigger: CTTCCCTTCCCCGACTTTGCAGATTTCTCTTCCCCC...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCGGGTCCCAAGGCTCTTaGCCTACAAAGAAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSGSQGS*PTKKSG
Trigger: TCCAGACTTCTTTGTAGGGCAAGAGCCTTGGGACCC...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCCCTGGGACCCAAAAATaGCAGTGCTTGGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRAPGTQK*QCLEIH
Trigger: GTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGG...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCAGATAAACAAGCTTCCTaGGAGAGGGACACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPDKQAS*ERDTWP
Trigger: TGGCCAGGTGTCCCTCTCGCAGGAAGCTTGTTTATC...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp TCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTGCTTAGGAGACTGGGTTCTGATGAGTTaGCTCCTCTACCCCATCCTA +
Preference number: 4 (lower is better)
Translates to: SGPGTQKCQCLEIHCLGDWVLMS*LLYPIL
Trigger: TAGGATGGGGTAGAGGAGGCAACTCATCAGAACCCA...GTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACCCCTACAAAGAAGTCTaGAACAATGGTTGTGTATCC +
Preference number: 4 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHPYKEV*NNGCVS
Trigger: GGATACACAACCATTGTTCCAGACTTCTTTGTAGGG...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGGCTTCTGTCATTTCTTaGGTTCTGATGAGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: RALACWGPQLSVHSRPALASVIS*VLMSCL
Trigger: GAGGCAACTCATCAGAACCCAAGAAATGACAGAAGC...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGTGTGTATCCATTTCCTaGGATCATGTCAGCTATATA +
Preference number: 4 (lower is better)
Translates to: STSQGFPGRPDECVRPPGCVSIS*DHVSYI
Trigger: TATATAGCTGACATGATCTCAGGAAATGGATACACA...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCCCAATTTTCTGGGCATaGCACTGTTGTTTCAGATAC +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIPIFWA*HCCFRY
Trigger: GTATCTGAAACAACAGTGTCATGCCCAGAAAATTGG...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATGGCCTGAGACTGCGCTaGACCGCGCGGAGGCCGAAC +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYGLRLR*TARRPN
Trigger: GTTCGGCCTCCGCGCGGTGCAGCGCAGTCTCAGGCC...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCACCCAAAAATGCCAGTaGTTGGAAATCCACTGCTTA +
Preference number: 4 (lower is better)
Translates to: TCLTCPTDPHTHMDHADITQKCQ*LEIHCL
Trigger: TAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGT...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp AAAACTACAACATCAAGTCACTTGCCCAAAGTCACATGTACGCACCCCGTAGGTCCTCCAGGGGAAACCTaGATAGATGACACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTTTSSHLPKVTCTHPVGPPGET*IDDTLG
Trigger: GCCCAGGGTGTCATCTATGCAGGTTTCCCCTGGAGG...ACCTACGGGGTGCGTACATGTGACTTTGGGCAAGTGACTTGATGTTGTAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATGACGCGAGAGGGACGTaGACGCGGCGACCGAGGACG +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYDARGT*TRRPRT
Trigger: CGTCCTCGGTCGCCGCGTCCACGTCCCTCTCGCGTC...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 72 bp TTCATTCTCGCACGAATTTCAGACCTCCCACCTATGTaGAAGACTCTGGCTACTGGCCACATGCTCACCGAC +
Preference number: 4 (lower is better)
Translates to: FILARISDLPPM*KTLATGHMLTD
Trigger: GTCGGTGAGCATGTGGCCAGTAGCCAGAGTCTTCAACATAGGTGGGAGGTCTGAAATTCGTGCGAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCCACCCTGGGCCCCAGTaGAGGCTTTGGCTCATAGCT +
Preference number: 4 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFHPGPQ*RLWLIA
Trigger: AGCTATGAGCCAAAGCCTTCACTGGGGCCCAGGGTG...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCTGGTTCAGAACACCATaGCATTTGACCAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSWFRTP*HLTKGL
Trigger: GAGTCCTTTGGTCAAATGTCATGGTGTTCTGAACCA...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCACTCCTGACCTCAGGTaGTCCACCCACTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFTPDLR*STHFGL
Trigger: GAGGCCAAAGTGGGTGGATCACCTGAGGTCAGGAGT...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCACTTGCCCTTGATTCTTaGTACATGTACTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPLALDS*YMYLFS
Trigger: GCTGAACAAGTACATGTAGCAAGAATCAAGGGCAAG...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCAGAAGTCTGGAACAATaGTTGTGTATCCATTTCCTG +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRARSLEQ*LCIHFL
Trigger: CAGGAAATGGATACACAACCATTGTTCCAGACTTCT...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACATGAGGCACTACACCTaGTCAGACCTTGTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYMRHYT*SDLVFK
Trigger: TTTAAAAACAAGGTCTGACCAGGTGTAGTGCCTCAT...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACAGATACGTCCTTGAGTaGAATCACAACATCATTTTC +
Preference number: 4 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYRYVLE*NHNIIF
Trigger: GAAAATGATGTTGTGATTCCACTCAAGGACGTATCT...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCTTTCCAAGCAAATTTTaGGATGAAAGCTATTCTAGG +
Preference number: 4 (lower is better)
Translates to: RESGCLSRNKLDTGQMRAFPSKF*DESYSR
Trigger: CCTAGAATAGCTTTCATCCCAAAATTTGCTTGGAAA...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
3UTR CAA 72 bp ATAAACTGCTTCTGTCATTTCTTGGGTTCTGATGAGTaGCCTCCTCTACCCCATCCTAACTTCTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: INCFCHFLGSDE*PPLPHPNFFPG
Trigger: ACCGGGAAAGAAGTTAGGATGGGGTAGAGGAGGCAACTCATCAGAACCCAAGAAATGACAGAAGCAGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATGCCTCCAGGTTCAAGTaGTTCTCCTCCTCAGACTCC +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYASRFK*FSSSDS
Trigger: GGAGTCTGAGGAGGAGAATCACTTGAACCTGGAGGC...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCCCATACTCAAGTCTGTaGCCAATGTCACACGGACAA +
Preference number: 4 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFPYSSL*PMSHGQ
Trigger: TTGTCCGTGTGACATTGGCCACAGACTTGAGTATGG...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATCGATGCACGAACCCATaGGTCTGCCCAGAAAATGTT +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYRCTNP*VCPENV
Trigger: AACATTTTCTGGGCAGACTCATGGGTTCGTGCATCG...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCAGGAAGGCTTGCCCTTaGTTCTTGCTACATGTACTT +
Preference number: 4 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFRKACP*FLLHVL
Trigger: AAGTACATGTAGCAAGAATCAAGGGCAAGCCTTCCT...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATAGCCCTGCTCAGGCTTaGATTCTCTCAACATTAGGC +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYSPAQA*ILSTLG
Trigger: GCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCT...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR GCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATAGCAGAATCCCACGATaGCAATTTTCTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYSRIPR*QFSGHD
Trigger: GTCATGCCCAGAAAATTGGCATCGTGGGATTCTGCT...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATTGTCTTCAGAATCCTTaGCAATGCCATAGACGGACA +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYCLQNP*QCHRRT
Trigger: TGTCCGTCTATGGCATTGTCAAGGATTCTGAAGACA...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CCA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCTCTCTATCGATCTTCTaGGCATTTCTTGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFSLSIF*AFLVFS
Trigger: GCTGAAAACAAGAAATGCCCAGAAGATCGATAGAGA...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR TCA 90 bp GATGCAAAAACTGAGGCTCAGGAAGCTCAAGTTTGGGAATTCTTTGAATTTTATTGTTCTTTCAACTTCTaGGTCAGCAAAGATACGTCC +
Preference number: 4 (lower is better)
Translates to: DAKTEAQEAQVWEFFEFYCSFNF*VSKDTS
Trigger: GGACGTATCTTTGCTGACTCAGAAGTTGAAAGAACA...ATAAAATTCAAAGAATTCCCAAACTTGAGCTTCCTGAGCCTCAGTTTTTGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS CCA 90 bp AGACTGCGCTGCACCGCGCGGAGGCCGAACCCAGAGGAGGCGGCGTaGCGCCGGGCGGGGACGCGAGAGGGACGTGGACGCGGCGACCGA +
Preference number: 5 (lower is better)
Translates to: RLRCTARRPNPEEAA*RRAGTREGRGRGDR
Trigger: TCGGTCGCCGCGTCCACGTCCCTCTCGCGTCCCCGCCCGGCGCCACGCCGCCTCCTCTGGGTTCGGCCTCCGCGCGGTGCAGCGCAGTCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000514202.1
CDS GCA 90 bp GACGCGAGAGGGACGTGGACGCGGCGACCGAGGACGCGGGGATCCTaGGGGACCAGTGGCTCCAGTCGTAGCCTCCTGGGAGAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: DARGTWTRRPRTRGS*GTSGSSRSLLGEPS
Trigger: GCTTGGCTCTCCCAGGAGGCTACGACTGGAGCCACTGGTCCCGCAGGATCCCCGCGTCCTCGGTCGCCGCGTCCACGTCCCTCTCGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000514202.1
CDS-3UTR CAA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGAGATTTAAGTCGGGCTaGTCCCGCGGCCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: STSQGFPGRPDECVRPPGRFKSG*SRGLRL
Trigger: CAGTCTCAGGCCGCGGGACAAGCCCGACTTAAATCT...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp GCCTCCTGGGAGCAGCCCTCAGCAGGCAAGGGCTTTGGCCTGTTGGGGTCCACAGATACAGCCACACCCTaGGTTCATTCTCGCACGAAT +
Preference number: 5 (lower is better)
Translates to: ASWEQPSAGKGFGLLGSTDTATP*VHSRTN
Trigger: ATTCGTGCGAGAATGAACCAAGGGTGTGGCTGTATC...TGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTGAGGGCTGCTCCCAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS GCA 90 bp TTGCAGAGATTTAAGTCGGGCCGTGCACGCGGCAAAGACCTTCTTTaGCATAGTCAGAACACACGCGGGAGTTCAGAGGAGCGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: LQRFKSGRARGKDLL*HSQNTRGSSEERGP
Trigger: CGGGCCCCGCTCCTCTGAACTCCCGCGTGTGTTCTGACTATGGCAAAGAAGGTCTTTGCCGCGTGCACGGCCCGACTTAAATCTCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511963.5
CDS-3UTR CAA 90 bp CCTGGGACCACCTTCCCATGGACAGCTGGATACCACCTGCTTGACTTGTCCCACCTGGATACCACCTGCTaGACTTGTCCCACTGACCCC +
Preference number: 5 (lower is better)
Translates to: PGTTFPWTAGYHLLDLSHLDTTC*TCPTDP
Trigger: GGGGTCAGTGGGACAAGTCAAGCAGGTGGTATCCAG...GTGGGACAAGTCAAGCAGGTGGTATCCAGCTGTCCATGGGAAGGTGGTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS CCA 90 bp GCTCACAAGGAATTTCTGTGTGAGCGCTTTGGGAGGGAGGCCATCTaGGGAGATGTGTGGCCTTCCATGGTTGTGGGATCCTGGCTTACG +
Preference number: 5 (lower is better)
Translates to: AHKEFLCERFGREAI*GDVWPSMVVGSWLT
Trigger: CGTAAGCCAGGATCCCACAACCATGGAAGGCCACACATCTCCCCAGATGGCCTCCCTCCCAAAGCGCTCACACAGAAATTCCTTGTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS-3UTR CAA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGTTGGGTTCTGATGAGTaGCCTCCTCTACCCCATCCT +
Preference number: 5 (lower is better)
Translates to: RALACWGPQLSVHSRPALLGSDE*PPLPHP
Trigger: AGGATGGGGTAGAGGAGGCAACTCATCAGAACCCAA...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCCAGCAGGCAAGGGCTTaGGCCTGTTGGGGTCCACAA +
Preference number: 5 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSQQARA*ACWGPQ
Trigger: TTGTGGACCCCAACAGGCCAAAGCCCTTGCCTGCTG...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCATGACAATCACAGCTTaGCCTGCATCAACGGGGGAT +
Preference number: 5 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIMTITA*PASTGD
Trigger: ATCCCCCGTTGATGCAGGCAAAGCTGTGATTGTCAT...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCGGGGTCCCAAGGCTCTaGCCCTACAAAGAAGTCTGG +
Preference number: 5 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSGVPRL*PYKEVW
Trigger: CCAGACTTCTTTGTAGGGCAAGAGCCTTGGGACCCC...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp GAAAGGCACATGGGAAACACCCACGACCACATCCCCAGGATCCCCGTCAGGGCACTGGGCATGACACTGTaGTTTCAGATACTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: ERHMGNTHDHIPRIPVRALGMTL*FQILQD
Trigger: ATCTTGAAGTATCTGAAACAACAGTGTCATGCCCAG...TGCCCTGACGGGGATCCTGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp TCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTGCTTAGGAGACACCTCCTGGGTTCTATaGATTCTTGTGCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: SGPGTQKCQCLEIHCLGDTSWVL*ILVPQP
Trigger: AGGCTGAGGCACAAGAATCAATAGAACCCAGGAGGT...GTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCAAGTAGTGGCACAATCTaGGCTCACTGCAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPSSGTI*AHCSLH
Trigger: GTGGAGACTGCAGTGAGCCAAGATTGTGCCACTACT...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCACAGAAAAGGCCACACTaGACCTGTCAGCTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPQKRPH*TCQLVL
Trigger: AAGGACCAGCTGACAGGTCAAGTGTGGCCTTTTCTG...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp ACCTGCTTGACTTGTCCCACTGACCCCCACACCCACATGGACCATGCCGATATCCAAAAATGCCAGTGCTaGGAAATCCACTGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: TCLTCPTDPHTHMDHADIQKCQC*EIHCLG
Trigger: TCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTG...GATATCGGCATGGTCCATGTGGGTGTGGGGGTCAGTGGGACAAGTCAAGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp AGGGCTTTGGCCTGTTGGGGTCCACAACTAAGTGTCCACAGTAGACCAGCCCTGTCTCCCCATACCCATTaGACAGATGCAAAAACTGAG +
Preference number: 5 (lower is better)
Translates to: RALACWGPQLSVHSRPALSPHTH*TDAKTE
Trigger: CTCAGTTTTTGCATCTGTCAAATGGGTATGGGGAGA...CAGGGCTGGTCTACTGTGGACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp CCAGTGCTTGGAAATCCACTGCTTAGGAGACAACAGCTGGGTGACAACTCTAGCAAGGGCTTTGGCCTGTaGGGGTCCACAACTAAGTGT +
Preference number: 5 (lower is better)
Translates to: PVLGNPLLRRQQLGDNSSKGFGL*GSTTKC
Trigger: ACACTTAGTTGTGGACCCCAACAGGCCAAAGCCCTT...GCTAGAGTTGTCACCCAGCTGTTGTCTCCTAAGCAGTGGATTTCCAAGCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS TCA 90 bp GTTCCCAAGCTGAACTTTCCCTCTGGCATAGTGACTTTCGGGTCCTaGGCGTCTATTTTCTTTCACAACCAGCTGCAGGGGTCCTTGAGT +
Preference number: 5 (lower is better)
Translates to: VPKLNFPSGIVTFGS*ASIFFHNQLQGSLS
Trigger: ACTCAAGGACCCCTGCAGCTGGTTGTGAAAGAAAATAGACGCTCAGGACCCGAAAGTCACTATGCCAGAGGGAAAGTTCAGCTTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS GCA 90 bp CACTCAGGGAAGATAGACCAGTCGCCAGAGGGGTCCCAAGGCTCTTaGCCTACAAAGAAGTCTGGAACAATGGTTGTGTATCCATTTCCT +
Preference number: 5 (lower is better)
Translates to: HSGKIDQSPEGSQGS*PTKKSGTMVVYPFP
Trigger: AGGAAATGGATACACAACCATTGTTCCAGACTTCTTTGTAGGGCAAGAGCCTTGGGACCCCTCTGGCGACTGGTCTATCTTCCCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS-3UTR CAA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACTCTTCTGGGCATTTCTaGTTTTCAGCCACTCAGGGA +
Preference number: 5 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYSSGHF*FSATQG
Trigger: TCCCTGAGTGGCTGAAAACAAGAAATGCCCAGAAGA...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp AGCACATCTCAGGGGTTTCCTGGGAGGCCGGATGAATGTGTGAGGCCTCCTGGGCAATGGAATCCTGTTTaGATCTCAATACTTCCCATA +
Preference number: 5 (lower is better)
Translates to: STSQGFPGRPDECVRPPGQWNPV*ISILPI
Trigger: TATGGGAAGTATTGAGATCAAAACAGGATTCCATTG...CCCAGGAGGCCTCACACATTCATCCGGCCTCCCAGGAAACCCCTGAGATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp TCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTGCTTAGGAGACGCTATATATCTGGTATaGGGCAACTGCCAGCCAAAT +
Preference number: 5 (lower is better)
Translates to: SGPGTQKCQCLEIHCLGDAIYLV*GNCQPN
Trigger: ATTTGGCTGGCAGTTGCCCAATACCAGATATATAGC...GTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS TCA 90 bp GCACAAGGCAGATTTACCATAGACGGACACCCCTGCCCTGAATTCTaGGTATTTCATCATCAAATGATGGACAGCAGTTCCACCCCAGCA +
Preference number: 5 (lower is better)
Translates to: AQGRFTIDGHPCPEF*VFHHQMMDSSSTPA
Trigger: TGCTGGGGTGGAACTGCTGTCCATCATTTGATGATGAAATACTCAGAATTCAGGGCAGGGGTGTCCGTCTATGGTAAATCTGCCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506821.1
ENST00000511963.5
CDS GCA 90 bp TGTGACATTGCAGCTGTCTGTTTGGGAAGGAAAGGAAGGCAGTATTaGGCAGTTCCCAAGCTGAACTTTCCCTCTGGCATAGTGACTTTC +
Preference number: 5 (lower is better)
Translates to: CDIAAVCLGRKGRQY*AVPKLNFPSGIVTF
Trigger: GAAAGTCACTATGCCAGAGGGAAAGTTCAGCTTGGGAACTGCGCAATACTGCCTTCCTTTCCTTCCCAAACAGACAGCTGCAATGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS-3UTR CAA 90 bp TCAGGCCCTGGGACCCAAAAATGCCAGTGCTTGGAAATCCACTGCTTAGGAGACAGTCTGGAACAATGGTaGTGTATCCATTTCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SGPGTQKCQCLEIHCLGDSLEQW*CIHFLR
Trigger: TCTCAGGAAATGGATACACAACCATTGTTCCAGACT...GTCTCCTAAGCAGTGGATTTCCAAGCACTGGCATTTTTGGGTCCCAGGGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS TCA 90 bp AGAATCCTTGACAATGCCATAGACGGACACCCCTGCCCTGAATTCTaGGTATTTCATCATCAAATGATGGACAGCAGTTCCACCCCAGCA +
Preference number: 5 (lower is better)
Translates to: RILDNAIDGHPCPEF*VFHHQMMDSSSTPA
Trigger: TGCTGGGGTGGAACTGCTGTCCATCATTTGATGATGAAATACTCAGAATTCAGGGCAGGGGTGTCCGTCTATGGCATTGTCAAGGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS CCA 90 bp GTCTCACTGCAGGAAGAGAGTTACAAGGAGTATTTAACGGCATGGTaGAAAGGCTCCTCCGTGCTAAATGGCCAAAACGAACGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: VSLQEESYKEYLTAW*KGSSVLNGQNERKF
Trigger: AAACTTGCGTTCGTTTTGGCCATTTAGCACGGAGGAGCCTTTCCACCATGCCGTTAAATACTCCTTGTAACTCTCTTCCTGCAGTGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS CCA 90 bp AATGTCTCACTGCAGGAAGAGAGTTACAAGGAGTATTTAACGGCATaGTGGAAAGGCTCCTCCGTGCTAAATGGCCAAAACGAACGCAAG +
Preference number: 5 (lower is better)
Translates to: NVSLQEESYKEYLTA*WKGSSVLNGQNERK
Trigger: CTTGCGTTCGTTTTGGCCATTTAGCACGGAGGAGCCTTTCCACCATGCCGTTAAATACTCCTTGTAACTCTCTTCCTGCAGTGAGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS-3UTR CAA 90 bp CAGCCCTGCTCAGGCTTGGATTCTCTCAACATTAGGCAAAGGGTCTCCCCATACATGTTCTTCATGGCTTaGCAGCATTTGTCACTTTCT +
Preference number: 5 (lower is better)
Translates to: QPCSGLDSLNIRQRVSPYMFFMA*QHLSLS
Trigger: AGAAAGTGACAAATGCTGCAAAGCCATGAAGAACAT...GTATGGGGAGACCCTTTGCCTAATGTTGAGAGAATCCAAGCCTGAGCAGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCACACCTGGCCACAGGTaGGACACTCAGGAATCAGGC +
Preference number: 5 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFTPGHR*DTQESG
Trigger: GCCTGATTCCTGAGTGTCCAACCTGTGGCCAGGTGT...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS TCA 90 bp GCAGTTCCACCCCAGCAGAATCCCACGATGCCAATTTTCTGGGCATaGCACTGTTGTTTCAGATACTTCAAGATAGCACTGATCTCTCTA +
Preference number: 5 (lower is better)
Translates to: AVPPQQNPTMPIFWA*HCCFRYFKIALISL
Trigger: TAGAGAGATCAGTGCTATCTTGAAGTATCTGAAACAACAGTGTCATGCCCAGAAAATTGGCATCGTGGGATTCTGCTGGGGTGGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS TCA 90 bp GACCCAGACCTCTTGACTCCCGGTGACATCCTCTGGTTAACTGCATaGCAAACCTCCACCTCTATTTTCAGATTCTTAAAACCCATTTCC +
Preference number: 5 (lower is better)
Translates to: DPDLLTPGDILWLTA*QTSTSIFRFLKPIS
Trigger: GGAAATGGGTTTTAAGAATCTGAAAATAGAGGTGGAGGTTTGTCATGCAGTTAACCAGAGGATGTCACCGGGAGTCAAGAGGTCTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511963.5
CDS CCA 90 bp CAAGGAGTATTTAACGGCATGGTGGAAAGGCTCCTCCGTGCTAAATaGCCAAAACGAACGCAAGTTTGCATACGGTGTGATTTCCACTAT +
Preference number: 5 (lower is better)
Translates to: QGVFNGMVERLLRAK*PKRTQVCIRCDFHY
Trigger: ATAGTGGAAATCACACCGTATGCAAACTTGCGTTCGTTTTGGCCATTTAGCACGGAGGAGCCTTTCCACCATGCCGTTAAATACTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS-3UTR CAA 90 bp CGGGAGAGTGGCTGTCTCAGTAGGAATAAACTGGACACAGGTCAGATGAGAGCCTTCCTGAGCATCTATTaGAATGTAAGTTGGACTTTC +
Preference number: 5 (lower is better)
Translates to: RESGCLSRNKLDTGQMRAFLSIY*NVSWTF
Trigger: GAAAGTCCAACTTACATTCAAATAGATGCTCAGGAA...GGCTCTCATCTGACCTGTGTCCAGTTTATTCCTACTGAGACAGCCACTCTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS GCA 90 bp TCATCAAATGATGGACAGCAGTTCCACCCCAGCAGAATCCCACGATaGCAATTTTCTGGGCATGACACTGTTGTTTCAGATACTTCAAGA +
Preference number: 5 (lower is better)
Translates to: SSNDGQQFHPSRIPR*QFSGHDTVVSDTSR
Trigger: TCTTGAAGTATCTGAAACAACAGTGTCATGCCCAGAAAATTGGCATCGTGGGATTCTGCTGGGGTGGAACTGCTGTCCATCATTTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS GCA 90 bp GTGGAAAGGCTCCTCCGTGCTAAATGGCCAAAACGAACGCAAGTTTaGATACGGTGTGATTTCCACTATGTCTTTAAAATGCATGGCGAA +
Preference number: 5 (lower is better)
Translates to: VERLLRAKWPKRTQV*IRCDFHYVFKMHGE
Trigger: TTCGCCATGCATTTTAAAGACATAGTGGAAATCACACCGTATGCAAACTTGCGTTCGTTTTGGCCATTTAGCACGGAGGAGCCTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS-3UTR CAA 90 bp TCAAAGAAGGATCCCATGAAAGGCACATGGGAAACACCCACGACCACATCCCCAACACCTGGTCAGACCTaGTTTTTAAATTATGATTCG +
Preference number: 5 (lower is better)
Translates to: SKKDPMKGTWETPTTTSPTPGQT*FLNYDS
Trigger: CGAATCATAATTTAAAAACAAGGTCTGACCAGGTGT...TGGGGATGTGGTCGTGGGTGTTTCCCATGTGCCTTTCATGGGATCCTTCTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS CCA 90 bp ATTCTTGCTACATGTACTTGTTCAGCCACTCAATTAAATTCCTTCTaGCCTCGTCAATGTAGGGCTTGTCTGCAGGTGAGCAATCTTCTC +
Preference number: 5 (lower is better)
Translates to: ILATCTCSATQLNSF*PRQCRACLQVSNLL
Trigger: GAGAAGATTGCTCACCTGCAGACAAGCCCTACATTGACGAGGCCAGAAGGAATTTAATTGAGTGGCTGAACAAGTACATGTAGCAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCTTCTCCACCTTCTGGTaGAGCCCATGTGTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFFSTFW*SPCVLN
Trigger: ATTCAGGACACATGGGCTCAACCAGAAGGTGGAGAA...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS GCA 90 bp AATTTTGGGATGAAAGCTATTCTAGGAAGGCTTGCCCTTGATTCTTaGTACATGTACTTGTTCAGCCACTCAATTAAATTCCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: NFGMKAILGRLALDS*YMYLFSHSIKFLLA
Trigger: GGCCAGAAGGAATTTAATTGAGTGGCTGAACAAGTACATGTAGCAAGAATCAAGGGCAAGCCTTCCTAGAATAGCTTTCATCCCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCAGCAAAGATACGTCCTaGAGTGGAATCACAACATCA +
Preference number: 5 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFSKDTS*SGITTS
Trigger: TGATGTTGTGATTCCACTCAAGGACGTATCTTTGCT...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS-3UTR CAA 90 bp GTCTACCCGTTTATAGTTCATGTTCTTCATGGCTTTGCAGCATTTGTCACTTTCTCTTGCTACATGTACTaGTTCAGCCACTCAATTAAA +
Preference number: 5 (lower is better)
Translates to: VYPFIVHVLHGFAAFVTFSCYMY*FSHSIK
Trigger: TTTAATTGAGTGGCTGAACAAGTACATGTAGCAAGA...GAAAGTGACAAATGCTGCAAAGCCATGAAGAACATGAACTATAAACGGGTAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS TCA 90 bp TTTAAACAAAGAAACACAACTTTATACATACGTGTATCCATTTCCTaGGATCATGTCAGCTATATATCTGGTATTGGGCAACTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: FKQRNTTLYIRVSIS*DHVSYISGIGQLPA
Trigger: GGCTGGCAGTTGCCCAATACCAGATATATAGCTGACATGATCTCAGGAAATGGATACACGTATGTATAAAGTTGTGTTTCTTTGTTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514202.1
CDS GCA 72 bp GGGACGTGGACGCGGCGACCGAGGACGCGGGGATCCTaGGGGACCAGTGGCTCCAGTCGTAGCCTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: GTWTRRPRTRGS*GTSGSSRSLLG
Trigger: TCCCAGGAGGCTACGACTGGAGCCACTGGTCCCGCAGGATCCCCGCGTCCTCGGTCGCCGCGTCCACGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000514202.1
CDS CCA 72 bp GAGCGCTTTGGGAGGGAGGCCATCTGGGGAGATGTGTaGCCTTCCATGGTTGTGGGATCCTGGCTTACGGAC +
Preference number: 6 (lower is better)
Translates to: ERFGREAIWGDV*PSMVVGSWLTD
Trigger: GTCCGTAAGCCAGGATCCCACAACCATGGAAGGCCACACATCTCCCCAGATGGCCTCCCTCCCAAAGCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS GCA 72 bp TTTAAGTCGGGCCGTGCACGCGGCAAAGACCTTCTTTaGCATAGTCAGAACACACGCGGGAGTTCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: FKSGRARGKDLL*HSQNTRGSSEE
Trigger: CTCCTCTGAACTCCCGCGTGTGTTCTGACTATGGCAAAGAAGGTCTTTGCCGCGTGCACGGCCCGACTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511963.5
CDS TCA 72 bp CCTTCTGGCCTCGTCAATGTAGGGCTTGTCTGCAGGTaGGCAATCTTCTCTCTTCCGATGCACGAACCCATG +
Preference number: 6 (lower is better)
Translates to: PSGLVNVGLVCR*AIFSLPMHEPM
Trigger: CATGGGTTCGTGCATCGGAAGAGAGAAGATTGCTCACCTGCAGACAAGCCCTACATTGACGAGGCCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296658.4
ENST00000510532.5
CDS TCA 72 bp CCTGAAAGATCTAGCTGCTCACAAGGAATTTCTGTGTaGGCGCTTTGGGAGGGAGGCCATCTGGGGAGATGT +
Preference number: 6 (lower is better)
Translates to: PERSSCSQGISV*ALWEGGHLGRC
Trigger: ACATCTCCCCAGATGGCCTCCCTCCCAAAGCGCTCACACAGAAATTCCTTGTGAGCAGCTAGATCTTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS TCA 72 bp CTGAACTTTCCCTCTGGCATAGTGACTTTCGGGTCCTaGGCGTCTATTTTCTTTCACAACCAGCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LNFPSGIVTFGS*ASIFFHNQLQG
Trigger: CCCCTGCAGCTGGTTGTGAAAGAAAATAGACGCTCAGGACCCGAAAGTCACTATGCCAGAGGGAAAGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS GCA 72 bp GCAGCTGTCTGTTTGGGAAGGAAAGGAAGGCAGTATTaGGCAGTTCCCAAGCTGAACTTTCCCTCTGGCATA +
Preference number: 6 (lower is better)
Translates to: AAVCLGRKGRQY*AVPKLNFPSGI
Trigger: TATGCCAGAGGGAAAGTTCAGCTTGGGAACTGCGCAATACTGCCTTCCTTTCCTTCCCAAACAGACAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS GCA 72 bp AATGTCACACGGACAAGGATAAGCTTCGTTAGCCATTaGAGAGATTTAAGTCGGGCCGTGCACGCGGCAAAG +
Preference number: 6 (lower is better)
Translates to: NVTRTRISFVSH*RDLSRAVHAAK
Trigger: CTTTGCCGCGTGCACGGCCCGACTTAAATCTCTGCAATGGCTAACGAAGCTTATCCTTGTCCGTGTGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510532.5
ENST00000511963.5
CDS CAA 72 bp TGCAGCTGTCTGTTTGGGAAGGAAAGGAAGGCAGTATaGCGCAGTTCCCAAGCTGAACTTTCCCTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: CSCLFGKERKAV*RSSQAELSLWH
Trigger: ATGCCAGAGGGAAAGTTCAGCTTGGGAACTGCGCAATACTGCCTTCCTTTCCTTCCCAAACAGACAGCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS CAA 72 bp GCTCTAACACAGGGTTGTGACATTGCAGCTGTCTGTTaGGGAAGGAAAGGAAGGCAGTATTGCGCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: ALTQGCDIAAVC*GRKGRQYCAVP
Trigger: GGGAACTGCGCAATACTGCCTTCCTTTCCTTCCCAAACAGACAGCTGCAATGTCACAACCCTGTGTTAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503834.1
CDS GCA 72 bp AAGATAGACCAGTCGCCAGAGGGGTCCCAAGGCTCTTaGCCTACAAAGAAGTCTGGAACAATGGTTGTGTAT +
Preference number: 6 (lower is better)
Translates to: KIDQSPEGSQGS*PTKKSGTMVVY
Trigger: ATACACAACCATTGTTCCAGACTTCTTTGTAGGGCAAGAGCCTTGGGACCCCTCTGGCGACTGGTCTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS GCA 72 bp GATGGACAGCAGTTCCACCCCAGCAGAATCCCACGATaGCAATTTTCTGGGCATGACACTGTTGTTTCAGAT +
Preference number: 6 (lower is better)
Translates to: DGQQFHPSRIPR*QFSGHDTVVSD
Trigger: ATCTGAAACAACAGTGTCATGCCCAGAAAATTGGCATCGTGGGATTCTGCTGGGGTGGAACTGCTGTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS CCA 72 bp TGGGCAGTCTTCACATTATTGGGGGTTGTGTTACACTaGATGGGGAGGCTTGTGATTGTTGTCACTCTTCCA +
Preference number: 6 (lower is better)
Translates to: WAVFTLLGVVLH*MGRLVIVVTLP
Trigger: TGGAAGAGTGACAACAATCACAAGCCTCCCCATCCAGTGTAACACAACCCCCAATAATGTGAAGACTGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506821.1
ENST00000511963.5
CDS CCA 72 bp TTTAACGGCATGGTGGAAAGGCTCCTCCGTGCTAAATaGCCAAAACGAACGCAAGTTTGCATACGGTGTGAT +
Preference number: 6 (lower is better)
Translates to: FNGMVERLLRAK*PKRTQVCIRCD
Trigger: ATCACACCGTATGCAAACTTGCGTTCGTTTTGGCCATTTAGCACGGAGGAGCCTTTCCACCATGCCGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS CCA 72 bp CTGCAGGAAGAGAGTTACAAGGAGTATTTAACGGCATaGTGGAAAGGCTCCTCCGTGCTAAATGGCCAAAAC +
Preference number: 6 (lower is better)
Translates to: LQEESYKEYLTA*WKGSSVLNGQN
Trigger: GTTTTGGCCATTTAGCACGGAGGAGCCTTTCCACCATGCCGTTAAATACTCCTTGTAACTCTCTTCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS TCA 72 bp CCCCAGCAGAATCCCACGATGCCAATTTTCTGGGCATaGCACTGTTGTTTCAGATACTTCAAGATAGCACTG +
Preference number: 6 (lower is better)
Translates to: PQQNPTMPIFWA*HCCFRYFKIAL
Trigger: CAGTGCTATCTTGAAGTATCTGAAACAACAGTGTCATGCCCAGAAAATTGGCATCGTGGGATTCTGCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS TCA 72 bp GACAATGCCATAGACGGACACCCCTGCCCTGAATTCTaGGTATTTCATCATCAAATGATGGACAGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: DNAIDGHPCPEF*VFHHQMMDSSS
Trigger: GGAACTGCTGTCCATCATTTGATGATGAAATACTCAGAATTCAGGGCAGGGGTGTCCGTCTATGGCATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS GCA 72 bp TTTGCATACGGTGTGATTTCCACTATGTCTTTAAAATaGATGGCGAAACACCCGTGCACGCGGCAAAGACCT +
Preference number: 6 (lower is better)
Translates to: FAYGVISTMSLK*MAKHPCTRQRP
Trigger: AGGTCTTTGCCGCGTGCACGGGTGTTTCGCCATGCATTTTAAAGACATAGTGGAAATCACACCGTATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS CCA 72 bp ACATGTACTTGTTCAGCCACTCAATTAAATTCCTTCTaGCCTCGTCAATGTAGGGCTTGTCTGCAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: TCTCSATQLNSF*PRQCRACLQVS
Trigger: GCTCACCTGCAGACAAGCCCTACATTGACGAGGCCAGAAGGAATTTAATTGAGTGGCTGAACAAGTACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS CCA 72 bp CAGGAAGAGAGTTACAAGGAGTATTTAACGGCATGGTaGAAAGGCTCCTCCGTGCTAAATGGCCAAAACGAA +
Preference number: 6 (lower is better)
Translates to: QEESYKEYLTAW*KGSSVLNGQNE
Trigger: TTCGTTTTGGCCATTTAGCACGGAGGAGCCTTTCCACCATGCCGTTAAATACTCCTTGTAACTCTCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS TCA 72 bp AGATTTACCATAGACGGACACCCCTGCCCTGAATTCTaGGTATTTCATCATCAAATGATGGACAGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: RFTIDGHPCPEF*VFHHQMMDSSS
Trigger: GGAACTGCTGTCCATCATTTGATGATGAAATACTCAGAATTCAGGGCAGGGGTGTCCGTCTATGGTAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506821.1
ENST00000511963.5
CDS TCA 72 bp AAAGATACCATAGACGGACACCCCTGCCCTGAATTCTaGGTATTTCATCATCAAATGATGGACAGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: KDTIDGHPCPEF*VFHHQMMDSSS
Trigger: GGAACTGCTGTCCATCATTTGATGATGAAATACTCAGAATTCAGGGCAGGGGTGTCCGTCTATGGTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510532.5
CDS TCA 72 bp CTCTTGACTCCCGGTGACATCCTCTGGTTAACTGCATaGCAAACCTCCACCTCTATTTTCAGATTCTTAAAA +
Preference number: 6 (lower is better)
Translates to: LLTPGDILWLTA*QTSTSIFRFLK
Trigger: TTTTAAGAATCTGAAAATAGAGGTGGAGGTTTGTCATGCAGTTAACCAGAGGATGTCACCGGGAGTCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511963.5
CDS GCA 72 bp CTCCTCCGTGCTAAATGGCCAAAACGAACGCAAGTTTaGATACGGTGTGATTTCCACTATGTCTTTAAAATG +
Preference number: 6 (lower is better)
Translates to: LLRAKWPKRTQV*IRCDFHYVFKM
Trigger: CATTTTAAAGACATAGTGGAAATCACACCGTATGCAAACTTGCGTTCGTTTTGGCCATTTAGCACGGAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506224.1
CDS TCA 72 bp AAAGAAGTCTGGAACAATGGTTGTGTATCCATTTCCTaGGATCATGTCAGCTATATATCTGGTATTGGGCAA +
Preference number: 6 (lower is better)
Translates to: KEVWNNGCVSIS*DHVSYISGIGQ
Trigger: TTGCCCAATACCAGATATATAGCTGACATGATCTCAGGAAATGGATACACAACCATTGTTCCAGACTTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
CDS GCA 72 bp ATGAAAGCTATTCTAGGAAGGCTTGCCCTTGATTCTTaGTACATGTACTTGTTCAGCCACTCAATTAAATTC +
Preference number: 6 (lower is better)
Translates to: MKAILGRLALDS*YMYLFSHSIKF
Trigger: GAATTTAATTGAGTGGCTGAACAAGTACATGTAGCAAGAATCAAGGGCAAGCCTTCCTAGAATAGCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296658.4
CDS CCA 72 bp TGTATCCATTTCCTGAGATCATGTCAGCTATATATCTaGTATTGGGCAACTGCCAGCCAAATATATCTTGAA +
Preference number: 6 (lower is better)
Translates to: CIHFLRSCQLYI*YWATASQIYLE
Trigger: TTCAAGATATATTTGGCTGGCAGTTGCCCAATACCAGATATATAGCTGACATGATCTCAGGAAATGGATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296658.4
ENST00000506821.1
ENST00000510532.5
ENST00000511963.5
ENST00000514202.1