Pregenerated sensors for CMAS (Homo sapiens)
Ensembl gene IDs: ENSG00000111726Ensembl transcript IDs: ENST00000229329.7, ENST00000534981.5, ENST00000535610.5, ENST00000538498.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACCACGGCCACCATTACATTTGCAAATGTATCCAACAGCCTTCTaGGCAGTAGAACAGGCATCAGCAGGAGCGCCACTTAGGCCCACT | + |
|
Preference number: 1 (lower is better) Translates to: APRPPLHLQMYPTAF*AVEQASAGAPLRPT Trigger: AGTGGGCCTAAGTGGCGCTCCTGCTGATGCCTGTTCTACTGCCCAGAAGGCTGTTGGATACATTTGCAAATGTAATGGTGGCCGTGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR CAA 90 bp | ATGTGCTCTGCAAATTCTCGGATGGCACCACGGCCACCATTACATTaGCAAATGTATCCAACAGCCTTCTGGGCAGTAGAACAGGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: MCSANSRMAPRPPLH*QMYPTAFWAVEQAS Trigger: TGATGCCTGTTCTACTGCCCAGAAGGCTGTTGGATACATTTGCAAATGTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAGAGCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR CAA 90 bp | CATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTaGCAATCCAGTTTTAAAGAAGACAGCGTCTGCTTTGAACAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: HSSTTASLSDTLTSI*QSSFKEDSVCFEQA Trigger: GGCCTGTTCAAAGCAGACGCTGTCTTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| 3UTR-3UTR GCA 90 bp | CTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCGCATTTCGTAGTATaGCATTTTTCCACCCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LHSSTTASLSDTLTSILQSHFVV*HFSTLL Trigger: AAGGAGGGTGGAAAAATGGCATACTACGAAATGCGA...TTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAAGACAGCGTCTaGTTTGAACAGGCCCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: STTASLSDTLTSILQSSFKEDSV*FEQALS Trigger: AGAAAGGGCCTGTTCAAAGCAGACGCTGTCTTCTTT...AAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTATTAGTAGGCAAATGTaGTCTGCAAATTCTCGGATG | + |
|
Preference number: 2 (lower is better) Translates to: STTASLSDTLTSILQSSFISRQM*SANSRM Trigger: CATCCGAGAATTTGCAGAGCACATTTGCCTACTAAT...AAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR CCA 72 bp | CCACCATTACATTTGCAAATGTATCCAACAGCCTTCTaGGCAGTAGAACAGGCATCAGCAGGAGCGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: PPLHLQMYPTAF*AVEQASAGAPL Trigger: AAGTGGCGCTCCTGCTGATGCCTGTTCTACTGCCCAGAAGGCTGTTGGATACATTTGCAAATGTAATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR CCA 72 bp | CCATTAGTAGGCAAATGTGCTCTGCAAATTCTCGGATaGCACCACGGCCACCATTACATTTGCAAATGTATC | + |
|
Preference number: 3 (lower is better) Translates to: PLVGKCALQILG*HHGHHYICKCI Trigger: GATACATTTGCAAATGTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAGAGCACATTTGCCTACTAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCCGGCCACCATTACATTaGCAAATGTATCCAACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EKCSFINRRACLTIHTVPRPPLH*QMYPTA Trigger: GGCTGTTGGATACATTTGCAAATGTAATGGTGGCCG...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR TCA 72 bp | TCATATCCTTCTTCTCGAATCATTTCTGCAACTTTTTaGAGATCAGTAGGATGTAAACATGGAGAAGTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SYPSSRIISATF*RSVGCKHGEVA Trigger: AGCTACTTCTCCATGTTTACATCCTACTGATCTTCAAAAAGTTGCAGAAATGATTCGAGAAGAAGGATATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | CCAACAGCCTTCTGGGCAGTAGAACAGGCATCAGCAGGAGCGCCACTTAGGCCCGCAGGACCCAGCCAATaGGCGGGACCCCCGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTAFWAVEQASAGAPLRPAGPSQ*AGPPPG Trigger: ACCTGGCGGGGGTCCCGCTCATTGGCTGGGTCCTGC...GGGCCTAAGTGGCGCTCCTGCTGATGCCTGTTCTACTGCCCAGAAGGCTGTTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | GCATCAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACTCCACACCTCGGCCCTaGCCGCCGCGAGAGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASAGAPLRPTLFKHSSSDSTPRP*PPRELR Trigger: GCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGA...GTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACACTTGGTTGGAGACGGAGGTaGCGGCCCCCTTCTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: QQERHLGPLSSSTLHQTLGWRRR*RPPSPP Trigger: CGGTGGAGAAGGGGGCCGCCACCTCCGTCTCCAACC...AAGTGTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGCAAATTCTCGGATGGCACCACGGCCACCATTACATTTGCAAATGTATCCGCGAGAGTTGCGCTaGAGCTTCGGCGGCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSANSRMAPRPPLHLQMYPRELR*SFGGRP Trigger: GGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGG...ATACATTTGCAAATGTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GTAGGCAAATGTGCTCTGCAAATTCTCGGATGGCACCACGGCCACCATTACATTTCAGGGGGATGCCTTTaGTGCCTCCCCGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGKCALQILGWHHGHHYISGGCL*CLPGPE Trigger: TTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCCTGA...AATGTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAGAGCACATTTGCCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGCCGCGAGAGTTGCGCTaGAGCTTCGGCGGCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLPRELR*SFGGRP Trigger: GGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGG...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | CTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAACCGCGAGAGTTGCGCTaGAGCTTCGGCGGCCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSSTTASLSDTLTSILQPRELR*SFGGRP Trigger: GGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGG...TTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGGGCCGCCGCGAGAGTTaGGCTGCAGCTTCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLGRRES*AAASAA Trigger: GGCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCC...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGGCAGGACCCAGCCAATaGGCGGGACCCCCGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLAGPSQ*AGPPPG Trigger: ACCTGGCGGGGGTCCCGCTCATTGGCTGGGTCCTGC...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTGGCCGCCGCGAGAGTTaGGCTGCAGCTTCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STTASLSDTLTSILQSSFGRRES*AAASAA Trigger: GGCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCC...AAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR CCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGTCCACACCTCGGCCCTaGCCGCCGCGAGAGTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLSTPRP*PPRELR Trigger: GCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGA...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | TATCCACATCTATATCCACACTATGTTCAGCTCGCATTTCGTAGTATGCCATTTGCAGGACCCAGCCAATaGGCGGGACCCCCGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YPHLYPHYVQLAFRSMPFAGPSQ*AGPPPG Trigger: ACCTGGCGGGGGTCCCGCTCATTGGCTGGGTCCTGC...AAATGGCATACTACGAAATGCGAGCTGAACATAGTGTGGATATAGATGTGGATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | CCAACAGCCTTCTGGGCAGTAGAACAGGCATCAGCAGGAGCGCCACTTAGGCCCTTCATTTCCAAGATATaGCACTTCTTTCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAFWAVEQASAGAPLRPFISKI*HFFPAQ Trigger: CTGTGCTGGAAAGAAGTGGCATATCTTGGAAATGAA...GGGCCTAAGTGGCGCTCCTGCTGATGCCTGTTCTACTGCCCAGAAGGCTGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGGGTTGGAGACGGAGGTaGCGGCCCCCTTCTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLGWRRR*RPPSPP Trigger: CGGTGGAGAAGGGGGCCGCCACCTCCGTCTCCAACC...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | AGTTTTAAAGAAGACAGCGTCTGCTTTGAACAGGCCCTTTCTGAGATTAGCCTCGGGGGATGCCTTTGCTaGCTCCCCGGGCCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: SFKEDSVCFEQALSEISLGGCLC*LPGPEL Trigger: TAATTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCC...GAGGCTAATCTCAGAAAGGGCCTGTTCAAAGCAGACGCTGTCTTCTTTAAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR CCA 90 bp | TATCCACATCTATATCCACACTATGTTCAGCTCGCATTTCGTAGTATGCCATTTGGTTGGAGACGGAGGTaGCGGCCCCCTTCTCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: YPHLYPHYVQLAFRSMPFGWRRR*RPPSPP Trigger: CGGTGGAGAAGGGGGCCGCCACCTCCGTCTCCAACC...AAATGGCATACTACGAAATGCGAGCTGAACATAGTGTGGATATAGATGTGGATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | GTAGGCAAATGTGCTCTGCAAATTCTCGGATGGCACCACGGCCACCATTACATTTCACTCCATCGAAACTaGTGGCGTCTCACAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGKCALQILGWHHGHHYISLHRN*WRLTTE Trigger: CTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGA...AATGTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAGAGCACATTTGCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGTCAGGGGGATGCCTTTaGTGCCTCCCCGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLSGGCL*CLPGPE Trigger: TTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCCTGA...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAATTTCACTCCATCGAAACTGATGGCGTCTCACAACAGAGAAAACAGATCAGGGGGATGCCTTTaGTGCCTCCCCGGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLNFTPSKLMASHNRENRSGGCL*CLPGPE Trigger: TTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCCTGA...TCTGTTTTCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATTCAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | GAACAGGCATCAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCAAAATCCCAACATCTTTaGAAGCACACAAACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EQASAGAPLRPTLFKHSSKSQHL*KHTNTQ Trigger: CTGTGTGTTTGTGTGCTTTCAAAGATGTTGGGATTT...TGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTGATGCCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | CTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAAGGGGGATGCCTTTGCTaGCTCCCCGGGCCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LHSSTTASLSDTLTSILQGGCLC*LPGPEL Trigger: TAATTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCC...TTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | CATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCTGTTCTTCAGGGGGATaGCTTTGCTGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSTTASLSDTLTSILQSCSSGG*LCCLPG Trigger: CCCGGGGAGGCAGCAAAGGCATCCCCCTGAAGAACA...GGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGGGGACCCCCGCCAGGTaGTTAATGTTCTTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLGTPAR*LMFFRG Trigger: CCCCCTGAAGAACATTAAGCACCTGGCGGGGGTCCC...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAATTTCACTCCATCGAAACTGATGGCGTCTCACAACAGAGAAAACAGAGGGACCCCCGCCAGGTaGTTAATGTTCTTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLNFTPSKLMASHNRENRGTPAR*LMFFRG Trigger: CCCCCTGAAGAACATTAAGCACCTGGCGGGGGTCCC...TCTGTTTTCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATTCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | CAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACACTTTCGCATTTCGTAGTATaGCATTTTTCCACCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQERHLGPLSSSTLHQTLSHFVV*HFSTLQ Trigger: TTGCAGGGTGGAAAAATGGCATACTACGAAATGCGA...AAGTGTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GCATCAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACATTAGTAGGCAAATGTaGTCTGCAAATTCTCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASAGAPLRPTLFKHSSSDISRQM*SANSRM Trigger: CATCCGAGAATTTGCAGAGCACATTTGCCTACTAAT...GTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCGGGGGATGCCTTTGCTaGCTCCCCGGGCCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPGGCLC*LPGPEL Trigger: TAATTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCC...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTGTTCTTCAGGGGGATaGCTTTGCTGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPCSSGG*LCCLPG Trigger: CCCGGGGAGGCAGCAAAGGCATCCCCCTGAAGAACA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGTGTTCTTCAGGGGGATaGCTTTGCTGCCTCCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHSSTTASLSDTLTSILCSSGG*LCCLPG Trigger: CCCGGGGAGGCAGCAAAGGCATCCCCCTGAAGAACA...CAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAAGGGACCCCCGCCAGGTaGTTAATGTTCTTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TASLSDTLTSILQSSFKEGTPAR*LMFFRG Trigger: CCCCCTGAAGAACATTAAGCACCTGGCGGGGGTCCC...TTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGCAAATTCTCGGATGGCACCACGGCCACCATTACATTTGCAAATGTATAAAGAAGACAGCGTCTaGTTTGAACAGGCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSANSRMAPRPPLHLQMYKEDSV*FEQALS Trigger: AGAAAGGGCCTGTTCAAAGCAGACGCTGTCTTCTTT...ATACATTTGCAAATGTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGGAAACCCATACACTCTaGAAGGCCCCTGAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLETHTL*KAPESR Trigger: CCTGGATTCAGGGGCCTTCCAGAGTGTATGGGTTTC...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | CTCTTCAAGCACTCTTCATCAGACACTTCATTTCCAAGATATGCCACTTCTTTCCTGCAAATTCTCGGATaGCACCACGGCCACCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKHSSSDTSFPRYATSFLQILG*HHGHHY Trigger: GTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAG...GAAAGAAGTGGCATATCTTGGAAATGAAGTGTCTGATGAAGAGTGCTTGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | CATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCCAATGTCAACCTCTCTaGAAGGCCCCTGAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSTTASLSDTLTSILQSQCQPL*KAPESR Trigger: CCTGGATTCAGGGGCCTTCCAGAGAGGTTGACATTG...GGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR CCA 90 bp | TCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTGAAACCCATACACTCTaGAAGGCCCCTGAATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STTASLSDTLTSILQSSFETHTL*KAPESR Trigger: CCTGGATTCAGGGGCCTTCCAGAGTGTATGGGTTTC...AAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCCTGCAAATTCTCGGATaGCACCACGGCCACCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPLQILG*HHGHHY Trigger: GTAATGGTGGCCGTGGTGCCATCCGAGAATTTGCAG...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTCACTCCATCGAAACTaGTGGCGTCTCACAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPSLHRN*WRLTTE Trigger: CTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | ACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAATCACTCCATCGAAACTaGTGGCGTCTCACAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TASLSDTLTSILQSSFKESLHRN*WRLTTE Trigger: CTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGA...TTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | CACTCCATCGAAACTGATGGCGTCTCACAACAGAGAAAACAGAATCATATCCTTAAATGTGGCCATTGGTaGGACATCCATCAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HSIETDGVSQQRKQNHILKCGHW*DIHQYC Trigger: GCAATATTGATGGATGTCTCACCAATGGCCACATTT...AAGGATATGATTCTGTTTTCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGAAAGAAGACAGCGTCTaGTTTGAACAGGCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLKEDSV*FEQALS Trigger: AGAAAGGGCCTGTTCAAAGCAGACGCTGTCTTCTTT...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAATTTCACTCCATCGAAACTGATGGCGTCTCACAACAGAGAAAACAGAAAAGAAGACAGCGTCTaGTTTGAACAGGCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLNFTPSKLMASHNRENRKEDSV*FEQALS Trigger: AGAAAGGGCCTGTTCAAAGCAGACGCTGTCTTCTTT...TCTGTTTTCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTGAAATTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | CACTCCATCGAAACTGATGGCGTCTCACAACAGAGAAAACAGAATCATATCCTTTCGCATTTCGTAGTATaGCATTTTTCCACCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSIETDGVSQQRKQNHILSHFVV*HFSTLL Trigger: AAGGAGGGTGGAAAAATGGCATACTACGAAATGCGA...AAGGATATGATTCTGTTTTCTCTGTTGTGAGACGCCATCAGTTTCGATGGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTATCCAACAGCCTTCTaGGCAGTAGAACAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPYPTAF*AVEQAS Trigger: TGATGCCTGTTCTACTGCCCAGAAGGCTGTTGGATA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGGGTAGAGCTGTCTTTTaGAACTTCAGAACTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLGRAVF*NFRTSS Trigger: CGAAGAAGTTCTGAAGTTTCAAAAGACAGCTCTACC...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | ATGTTCAGCTCGCATTTCGTAGTATGCCATTTTTCCACCCTCCTTTCTGAATTTGCTTGTCTGATACACTaGCTTCCATTTTGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MFSSHFVVCHFSTLLSEFACLIH*LPFCNP Trigger: TGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGC...AAATTCAGAAAGGAGGGTGGAAAAATGGCATACTACGAAATGCGAGCTGAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR GCA 90 bp | CTCTTCAAGCACTCTTCATCAGACACTTCATTTCCAAGATATGCCACTTCTTTCTCTTCGATGAACTTGTaGACCAAATTGTTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFKHSSSDTSFPRYATSFSSMNL*TKLFGH Trigger: GTGGCCAAACAATTTGGTGCACAAGTTCATCGAAGA...GAAAGAAGTGGCATATCTTGGAAATGAAGTGTCTGATGAAGAGTGCTTGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGTCGCATTTCGTAGTATaGCATTTTTCCACCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLSHFVV*HFSTLQ Trigger: TTGCAGGGTGGAAAAATGGCATACTACGAAATGCGA...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | CATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCTCAGAACTTCTTCGATaGACTTGTGCACCAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSTTASLSDTLTSILQSSELLR*TCAPNC Trigger: ACAATTTGGTGCACAAGTTCATCGAAGAAGTTCTGA...GGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGGGTAGAGCTGTCTTTTaGAACTTCAGAACTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLHSSTTASLSDTLTSILGRAVF*NFRTSS Trigger: CGAAGAAGTTCTGAAGTTTCAAAAGACAGCTCTACC...CAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCAAATGTGGCCATTGGTaGGACATCCATCAATATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPKCGHW*DIHQYC Trigger: GCAATATTGATGGATGTCTCACCAATGGCCACATTT...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000229329.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCGCTTGTCTGATACACTaGCTTCCATTTTGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPACLIH*LPFCNP Trigger: TGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGC...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTCTTCGATGAACTTGTaGACCAAATTGTTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPSSMNL*TKLFGH Trigger: GTGGCCAAACAATTTGGTGCACAAGTTCATCGAAGA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCGGCCACCATTACATTTaGAAATGTATCCAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPGHHYI*KCIQQP Trigger: AGGCTGTTGGATACATTTGCAAATGTAATGGTGGCC...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGGGCCACCATTACATTTaGAAATGTATCCAACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHSSTTASLSDTLTSILGHHYI*KCIQQP Trigger: AGGCTGTTGGATACATTTGCAAATGTAATGGTGGCC...CAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| 3UTR CAA 72 bp | ACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTaGCAATCCAGTTTTAAAGAAGACAGCGTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TTASLSDTLTSI*QSSFKEDSVCF Trigger: AAAGCAGACGCTGTCTTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTCAGAACTTCTTCGATaGACTTGTGCACCAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPSELLR*TCAPNC Trigger: ACAATTTGGTGCACAAGTTCATCGAAGAAGTTCTGA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGCATGGAGAAGTAGCTTaGATATTTCCTACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GMSYHTHCPQINKIPTSLHGEVA*IFPTMS Trigger: TGACATTGTAGGAAATATTCAAGCTACTTCTCCATG...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | CTCTTCAAGCACTCTTCATCAGACACTTCATTTCCAAGATATGCCACTTCTTTCCATGGAGAAGTAGCTTaGATATTTCCTACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFKHSSSDTSFPRYATSFHGEVA*IFPTMS Trigger: TGACATTGTAGGAAATATTCAAGCTACTTCTCCATG...GAAAGAAGTGGCATATCTTGGAAATGAAGTGTCTGATGAAGAGTGCTTGAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR TCA 90 bp | ATGTTCAGCTCGCATTTCGTAGTATGCCATTTTTCCACCCTCCTTTCTGAATTTCATGGAGAAGTAGCTTaGATATTTCCTACAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MFSSHFVVCHFSTLLSEFHGEVA*IFPTMS Trigger: TGACATTGTAGGAAATATTCAAGCTACTTCTCCATG...AAATTCAGAAAGGAGGGTGGAAAAATGGCATACTACGAAATGCGAGCTGAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | ACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAAGCTTGTCTGATACACTaGCTTCCATTTTGCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TASLSDTLTSILQSSFKEACLIH*LPFCNP Trigger: TGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGC...TTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR TCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCAAATCCCAACATCTTTaGAAGCACACAAACACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPKSQHL*KHTNTQ Trigger: CTGTGTGTTTGTGTGCTTTCAAAGATGTTGGGATTT...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTTCATTTCCAAGATATaGCACTTCTTTCCAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPFISKI*HFFPAQ Trigger: CTGTGCTGGAAAGAAGTGGCATATCTTGGAAATGAA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCATTAGTAGGCAAATGTaGTCTGCAAATTCTCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EKCSFINRRACLTIHTVPISRQM*SANSRM Trigger: CATCCGAGAATTTGCAGAGCACATTTGCCTACTAAT...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR GCA 90 bp | ACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAACACCTTAATACTCTTTaGTCTGCAATAGGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TASLSDTLTSILQSSFKEHLNTL*SAIGQS Trigger: TGATTGGCCTATTGCAGAGCAAAGAGTATTAAGGTG...TTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS CCA 90 bp | AGAATTAGGGCTGCCAGGTGCGGGGGCTTCTCCACACCTCGGCCCTaGCCGCCGCGAGAGTTGCGCTGCAGCTTCGGCGGCCGGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RIRAARCGGFSTPRP*PPRELRCSFGGRPR Trigger: CCGGGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGCCCTAATTCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR CAA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGTGGCCGCCGCGAGAGTaGCGCTGCAGCTTCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMSYHTHCPQINKIPTSLWPPRE*RCSFGG Trigger: GCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCA...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | TCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTTGGCCGCCGCGAGAGTaGCGCTGCAGCTTCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: STTASLSDTLTSILQSSFWPPRE*RCSFGG Trigger: GCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCA...AAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGTGGCCGCCGCGAGAGTaGCGCTGCAGCTTCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLHSSTTASLSDTLTSILWPPRE*RCSFGG Trigger: GCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCA...CAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACACTTAAGACAGCGTCTGCTTaGAACAGGCCCTTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QQERHLGPLSSSTLHQTLKTASA*NRPFLR Trigger: TCTCAGAAAGGGCCTGTTCAAAGCAGACGCTGTCTT...AAGTGTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACACTTCGGCCACCATTACATTaGCAAATGTATCCAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQERHLGPLSSSTLHQTLRPPLH*QMYPTA Trigger: GGCTGTTGGATACATTTGCAAATGTAATGGTGGCCG...AAGTGTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GCATCAGCAGGAGCGCCACTTAGGCCCACTCTCTTCAAGCACTCTTCATCAGACACATGGAGAAGTAGCTaGAATATTTCCTACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASAGAPLRPTLFKHSSSDTWRSS*NISYNV Trigger: GACATTGTAGGAAATATTCAAGCTACTTCTCCATGT...GTCTGATGAAGAGTGCTTGAAGAGAGTGGGCCTAAGTGGCGCTCCTGCTGATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTTCTCCATCCCAGTCTaGTCGACGAGGCCGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: EKCSFINRRACLTIHTVPFSIPV*STRPFS Trigger: GCTAAACGGCCTCGTCGACAAGACTGGGATGGAGAA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGTTCTCCATCCCAGTCTaGTCGACGAGGCCGTTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLHSSTTASLSDTLTSILFSIPV*STRPFS Trigger: GCTAAACGGCCTCGTCGACAAGACTGGGATGGAGAA...CAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGAAGACAGCGTCTGCTTaGAACAGGCCCTTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GMSYHTHCPQINKIPTSLKTASA*NRPFLR Trigger: TCTCAGAAAGGGCCTGTTCAAAGCAGACGCTGTCTT...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGCGGCCACCATTACATTaGCAAATGTATCCAACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GMSYHTHCPQINKIPTSLRPPLH*QMYPTA Trigger: GGCTGTTGGATACATTTGCAAATGTAATGGTGGCCG...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | TTGCAATCCAGTTTTAAAGAAGACAGCGTCTGCTTTGAACAGGCCCTTTCTGAGAACTTGTGCACCAAATaGTTTGGCCACATTCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQSSFKEDSVCFEQALSENLCTK*FGHILN Trigger: ATTGAGAATGTGGCCAAACAATTTGGTGCACAAGTT...CTCAGAAAGGGCCTGTTCAAAGCAGACGCTGTCTTCTTTAAAACTGGATTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | ACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAAAAGACAGCGTCTGCTTaGAACAGGCCCTTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TASLSDTLTSILQSSFKEKTASA*NRPFLR Trigger: TCTCAGAAAGGGCCTGTTCAAAGCAGACGCTGTCTT...TTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGCACTCTTCATCAGACACTTCATTTCCAAGATATGCCACTTCTTTCTCTACAACTGCTAGCTaGTCTGATACACTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFKHSSSDTSFPRYATSFSTTAS*SDTLTS Trigger: GGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA...GAAAGAAGTGGCATATCTTGGAAATGAAGTGTCTGATGAAGAGTGCTTGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | CTCCATTCATCTACAACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCTACAACTGCTAGCTaGTCTGATACACTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHSSTTASLSDTLTSILQSTTAS*SDTLTS Trigger: GGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA...TTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGATGAATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGCACTCTTCATCAGACACTTCATTTCCAAGATATGCCACTTCTTTCACTTCTTCGATGAACTaGTGCACCAAATTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFKHSSSDTSFPRYATSFTSSMN*CTKLFG Trigger: GCCAAACAATTTGGTGCACAAGTTCATCGAAGAAGT...GAAAGAAGTGGCATATCTTGGAAATGAAGTGTCTGATGAAGAGTGCTTGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTCTACAACTGCTAGCTaGTCTGATACACTGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKCSFINRRACLTIHTVPSTTAS*SDTLTS Trigger: GGAAGTCAGTGTATCAGACAAGCTAGCAGTTGTAGA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS CCA 90 bp | TTGAAACTTCAGAACTTCTTCGATGAACTTGTGCACCAAATTGTTTaGCCACATTCTCAATTTCATCATGGTCTGTCGAAACCCATACAC | + |
|
Preference number: 5 (lower is better) Translates to: LKLQNFFDELVHQIV*PHSQFHHGLSKPIH Trigger: GTGTATGGGTTTCGACAGACCATGATGAAATTGAGAATGTGGCCAAACAATTTGGTGCACAAGTTCATCGAAGAAGTTCTGAAGTTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000538498.1 |
||
| CDS-3UTR CAA 90 bp | CTCTTCAAGCACTCTTCATCAGACACTTCATTTCCAAGATATGCCACTTCTTTCTGTGCACCAAATTGTTaGGCCACATTCTCAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFKHSSSDTSFPRYATSFCAPNC*ATFSIS Trigger: TGAAATTGAGAATGTGGCCAAACAATTTGGTGCACA...GAAAGAAGTGGCATATCTTGGAAATGAAGTGTCTGATGAAGAGTGCTTGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGAACTTGTGCACCAAATaGTTTGGCCACATTCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GMSYHTHCPQINKIPTSLNLCTK*FGHILN Trigger: ATTGAGAATGTGGCCAAACAATTTGGTGCACAAGTT...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCACTTCTTCGATGAACTaGTGCACCAAATTGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EKCSFINRRACLTIHTVPTSSMN*CTKLFG Trigger: GCCAAACAATTTGGTGCACAAGTTCATCGAAGAAGT...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GAGAAATGTAGTTTTATTAATAGAAGGGCATGTCTTACCATACACACTGTCCCCTGTGCACCAAATTGTTaGGCCACATTCTCAATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EKCSFINRRACLTIHTVPCAPNC*ATFSIS Trigger: TGAAATTGAGAATGTGGCCAAACAATTTGGTGCACA...GGGGACAGTGTGTATGGTAAGACATGCCCTTCTATTAATAAAACTACATTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | GGCATGTCTTACCATACACACTGTCCCCAGATAAATAAAATCCCAACATCTTTGACATGGAGAAGTAGCTaGAATATTTCCTACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GMSYHTHCPQINKIPTSLTWRSS*NISYNV Trigger: GACATTGTAGGAAATATTCAAGCTACTTCTCCATGT...CAAAGATGTTGGGATTTTATTTATCTGGGGACAGTGTGTATGGTAAGACATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS-3UTR CAA 90 bp | ACTGCTAGCTTGTCTGATACACTGACTTCCATTTTGCAATCCAGTTTTAAAGAAACATGGAGAAGTAGCTaGAATATTTCCTACAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: TASLSDTLTSILQSSFKETWRSS*NISYNV Trigger: GACATTGTAGGAAATATTCAAGCTACTTCTCCATGT...TTCTTTAAAACTGGATTGCAAAATGGAAGTCAGTGTATCAGACAAGCTAGCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000534981.5 ENST00000535610.5 |
||
| CDS GCA 72 bp | TCCACACCTCGGCCCTGGCCGCCGCGAGAGTTGCGCTaGAGCTTCGGCGGCCGGCCCCGGGACGGTCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: STPRPWPPRELR*SFGGRPRDGRP Trigger: GGGGCGACCGTCCCGGGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS GCA 72 bp | GCTTCTCCACACCTCGGCCCTGGCCGCCGCGAGAGTTaGGCTGCAGCTTCGGCGGCCGGCCCCGGGACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASPHLGPGRRES*AAASAAGPGTV Trigger: GACCGTCCCGGGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGAGAAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS CAA 72 bp | GGCTTCTCCACACCTCGGCCCTGGCCGCCGCGAGAGTaGCGCTGCAGCTTCGGCGGCCGGCCCCGGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: GFSTPRPWPPRE*RCSFGGRPRDG Trigger: ACCGTCCCGGGGCCGGCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGAGAAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS CCA 72 bp | GCTGCCAGGTGCGGGGGCTTCTCCACACCTCGGCCCTaGCCGCCGCGAGAGTTGCGCTGCAGCTTCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AARCGGFSTPRP*PPRELRCSFGG Trigger: GCCGCCGAAGCTGCAGCGCAACTCTCGCGGCGGCCAGGGCCGAGGTGTGGAGAAGCCCCCGCACCTGGCAGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS CCA 72 bp | CCCGGGACGGTCGCCCCCGCGGGTTGGAGACGGAGGTaGCGGCCCCCTTCTCCACCGAGTCCATCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGTVAPAGWRRR*RPPSPPSPSSS Trigger: GGAGGAAGATGGACTCGGTGGAGAAGGGGGCCGCCACCTCCGTCTCCAACCCGCGGGGGCGACCGTCCCGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS GCA 72 bp | CGCAGGACCCAGCCAATGAGCGGGACCCCCGCCAGGTaGTTAATGTTCTTCAGGGGGATGCCTTTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRTQPMSGTPAR*LMFFRGMPLLP Trigger: AGGCAGCAAAGGCATCCCCCTGAAGAACATTAAGCACCTGGCGGGGGTCCCGCTCATTGGCTGGGTCCTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS CAA 72 bp | CCCGCCAGGTGCTTAATGTTCTTCAGGGGGATGCCTTaGCTGCCTCCCCGGGCCAGAATTAGGGCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PARCLMFFRGMP*LPPRARIRAAR Trigger: CCTGGCAGCCCTAATTCTGGCCCGGGGAGGCAGCAAAGGCATCCCCCTGAAGAACATTAAGCACCTGGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000535610.5 |
||
| CDS CCA 72 bp | GCACCAAATTGTTTGGCCACATTCTCAATTTCATCATaGTCTGTCGAAACCCATACACTCTGGAAGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: APNCLATFSISS*SVETHTLWKAP Trigger: AGGGGCCTTCCAGAGTGTATGGGTTTCGACAGACCATGATGAAATTGAGAATGTGGCCAAACAATTTGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229329.7 ENST00000534981.5 |
||
| CDS GCA 72 bp | TATATCCACACTATGTTCAGCTCGCATTTCGTAGTATaGCATTTTTCCACCCTGCAAGTAACCCATCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: YIHTMFSSHFVV*HFSTLQVTHLY Trigger: ATAGAGATGGGTTACTTGCAGGGTGGAAAAATGGCATACTACGAAATGCGAGCTGAACATAGTGTGGATATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000538498.1 |
||
| CDS TCA 72 bp | GTAGAGCTGTCTTTTGAAACTTCAGAACTTCTTCGATaGACTTGTGCACCAAATTGTTTGGCCACATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VELSFETSELLR*TCAPNCLATFS Trigger: TGAGAATGTGGCCAAACAATTTGGTGCACAAGTTCATCGAAGAAGTTCTGAAGTTTCAAAAGACAGCTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000538498.1 |
||
| CDS CCA 72 bp | CAGAACTTCTTCGATGAACTTGTGCACCAAATTGTTTaGCCACATTCTCAATTTCATCATGGTCTGTCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QNFFDELVHQIV*PHSQFHHGLSK Trigger: TTTCGACAGACCATGATGAAATTGAGAATGTGGCCAAACAATTTGGTGCACAAGTTCATCGAAGAAGTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000538498.1 |
||
| CDS CCA 72 bp | GCACCAAATTGTTTGGCCACATTCTCAATTTCATCATaGTCTGTCGAAACCCATACACTGTTCAGATATCAA | + |
|
Preference number: 6 (lower is better) Translates to: APNCLATFSISS*SVETHTLFRYQ Trigger: TTGATATCTGAACAGTGTATGGGTTTCGACAGACCATGATGAAATTGAGAATGTGGCCAAACAATTTGGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538498.1 |
||
| CDS CAA 72 bp | AACTTCAGAACTTCTTCGATGAACTTGTGCACCAAATaGTTTGGCCACATTCTCAATTTCATCATGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NFRTSSMNLCTK*FGHILNFIMVC Trigger: ACAGACCATGATGAAATTGAGAATGTGGCCAAACAATTTGGTGCACAAGTTCATCGAAGAAGTTCTGAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000229329.7 ENST00000534981.5 ENST00000538498.1 |
||