Pregenerated sensors for CMA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000092009Ensembl transcript IDs: ENST00000206446.4, ENST00000250378.7
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTaGTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VAEGPRVDQNEWHTL*CSGPVPASLSGWLR Trigger: CCTGAGCCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR GCA 90 bp | GCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTaGTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGCTCAGGATC | + |
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Preference number: 1 (lower is better) Translates to: AEGPRVDQNEWHTLC*SGPVPASLSGWLRI Trigger: GATCCTGAGCCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR CCA 90 bp | AGGCTTAGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTaGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCA | + |
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Preference number: 1 (lower is better) Translates to: RLRVVAEGPRVDQNE*HTLCCSGPVPASLS Trigger: TGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCTAAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR-3UTR GCA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTGAGTGGCACACACTTTaGTGCTCAGGTCCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSLRFIESSVTCRILLEAEWHTL*CSGPVP Trigger: TGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTC...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTGTAGACCAGAATGAGTaGCACACACTTTGCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSLRFIESSVTCRILLEAVDQNE*HTLCCS Trigger: TGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTAC...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR GCA 72 bp | CCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTaGTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: PRVDQNEWHTLC*SGPVPASLSGW Trigger: CCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR GCA 72 bp | GGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTaGTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GPRVDQNEWHTL*CSGPVPASLSG Trigger: GCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| 3UTR CCA 72 bp | GTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTaGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: VVAEGPRVDQNE*HTLCCSGPVPA Trigger: AGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | GAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGCCTGCAGGATCTGGTTaGTCCAGGGCCGGTAATGGG | + |
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Preference number: 4 (lower is better) Translates to: EWHTLCCSGPVPASLSGWPAGSG*SRAGNG Trigger: CCCATTACCGGCCCTGGATCAACCAGATCCTGCAGG...CCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | AGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGCATTCTGTGCCCCCGATaGTCTCCCCAGCTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGTHFAAQVQFQLPFQAGILCPR*SPQLQL Trigger: GAGCTGAAGCTGGGGAGATCATCGGGGGCACAGAAT...GCCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | GAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGGACAGCAGGGGGCTTTaGATCCGACCGTCCATAGGA | + |
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Preference number: 4 (lower is better) Translates to: EWHTLCCSGPVPASLSGWDSRGL*IRPSIG Trigger: TCCTATGGACGGTCGGATGCAAAGCCCCCTGCTGTC...CCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | GTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCGTAGGGGCGGGAATGTaGCTTGCATTCTGTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: VVAEGPRVDQNEWHTLCCVGAGM*LAFCAP Trigger: GGGGGCACAGAATGCAAGCCACATTCCCGCCCCTAC...GCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | GAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGAGGCCTGGGGATCCATaGGTCTCAGCTTCACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: EWHTLCCSGPVPASLSGWRPGDP*VSASPL Trigger: AAGAGGTGAAGCTGAGACTCATGGATCCCCAGGCCT...CCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | GTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCTCATGTGGTCAAAGTCTCTaGAGTGGCTGCAGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VAEGPRVDQNEWHTLCCSCGQSL*SGCRPG Trigger: CCCAGGCCTGCAGCCACTTCAGAGACTTTGACCACA...TGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | GTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCTCAGACCTTCCTGCACAATaGGCAGCCGTCAGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VAEGPRVDQNEWHTLCCSDLPAQ*AAVSTK Trigger: CTTTGTGCTGACGGCTGCTCATTGTGCAGGAAGGTC...TGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | GACCAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTAAGTGGCTGCAGGCCTaGGGATCCATGAGTCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: DQNEWHTLCCSGPVPASLKWLQA*GSMSLS Trigger: GCTGAGACTCATGGATCCCCAGGCCTGCAGCCACTT...AAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | AATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCAATGGGAGATTCGGGTaGAGACAGCAGGGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NEWHTLCCSGPVPASLSGNGRFG*RQQGAL Trigger: CAAAGCCCCCTGCTGTCTTCACCCGAATCTCCCATT...GCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | GTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCTGGCACACACTTTGCTaGTCAGGTCCAGTTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: VVAEGPRVDQNEWHTLCCWHTLC*SGPVPA Trigger: AGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCA...GCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | AGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCGAGTGGCACACACTTTaGTGCTCAGGTCCAGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RVVAEGPRVDQNEWHTLCEWHTL*CSGPVP Trigger: TGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTC...GCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | AGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCCCCCAGCTTCAGCTCTaGAGCACAAGAGAAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RVVAEGPRVDQNEWHTLCPQLQL*STRERA Trigger: TGCTCTTTCTCTTGTGCTCCAGAGCTGAAGCTGGGG...GCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | AGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGCTTGTCTTCCTGGGATTaGCCACACACAGCTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: SGTHFAAQVQFQLPFQAGLSSWD*PHTAED Trigger: ATCTTCAGCTGTGTGTGGGCAATCCCAGGAAGACAA...GCCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | AGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCAAAGTTGAATTGGGATaGGAAGGGGAGTGTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RVVAEGPRVDQNEWHTLCKVELG*EGECPH Trigger: GTGGGGACACTCCCCTTCCCATCCCAATTCAACTTT...GCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | CAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCATCAAAGTCTCTGAAGTaGCTGCAGGCCTGGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: QNEWHTLCCSGPVPASLSSKSLK*LQAWGS Trigger: GGATCCCCAGGCCTGCAGCCACTTCAGAGACTTTGA...TGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | AGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCAGGCTGGCGTAGACCAGAATGAGTaGCACACACTTTGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGTHFAAQVQFQLPFQAGVDQNE*HTLCCS Trigger: TGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTAC...GCCAGCCTGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | GACCAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTAAGGGTAGACCAGAATaGGTGGCACACACTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: DQNEWHTLCCSGPVPASLKGRPE*VAHTLL Trigger: CAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTT...AAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | GTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCTCATGTTATAGACCTTCCTaGACAATGAGCAGCCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VAEGPRVDQNEWHTLCCSCYRPS*TMSSRQ Trigger: CTGACGGCTGCTCATTGTGCAGGAAGGTCTATAACA...TGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | TGGAGGCTTAGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACTCCTCTGTTATGTTATaGGCTCCAAGGGTGACTGTT | + |
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Preference number: 4 (lower is better) Translates to: WRLRVVAEGPRVDQNEWHSSVML*APRVTV Trigger: AACAGTCACCCTTGGAGCCCATAACATAACAGAGGA...GTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCTAAGCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | GTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCCAGATTTTGTCTTCCTaGGATTGCCCACACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: VVAEGPRVDQNEWHTLCCQILSS*DCPHTA Trigger: AGCTGTGTGTGGGCAATCCCAGGAAGACAAAATCTG...GCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | CAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCACAGCCAGGGTCAGGCTaGCTTTCTCCTTCAACTTTA | + |
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Preference number: 4 (lower is better) Translates to: QNEWHTLCCSGPVPASLSQPGSG*LSPSTL Trigger: TAAAGTTGAAGGAGAAAGCCAGCCTGACCCTGGCTG...TGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | CAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTTCACCTGTAGGATACTTCTaGAGGCTTAGGGTTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QNEWHTLCCSGPVPASLSPVGYF*RLRVVA Trigger: AGCCACAACCCTAAGCCTCCAGAAGTATCCTACAGG...TGAAAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTCTCTTGCAGAGTGTCTaGGCCCGGCTTCAACACACC | + |
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Preference number: 4 (lower is better) Translates to: SSLRFIESSVTCRILLEALLQSV*ARLQHT Trigger: GGTGTGTTGAAGCCGGGCTCAGACACTCTGCAAGAG...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTCTCAGCTTCACCTCTTaGAGAGTGTCTGAGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SSLRFIESSVTCRILLEALSFTS*RVSEPG Trigger: GCCGGGCTCAGACACTCTGCAAGAGGTGAAGCTGAG...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | GTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCAGAGTCTCCCTTAAATaGAGATTTTGTCTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VVAEGPRVDQNEWHTLCCRVSLK*RFCLPG Trigger: CCCAGGAAGACAAAATCTGCATTTAAGGGAGACTCT...GCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR GCA 90 bp | CTTAGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTATAACCTCAAGCTTCTaGCATGTGTCTTCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRVVAEGPRVDQNEWHTLITSSF*HVSSSS Trigger: AGAGGAAGAAGACACATGGCAGAAGCTTGAGGTTAT...AAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CCA 90 bp | CCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAATTTTGAGGGACCGTTaGAAGTTACAATTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PRVDQNEWHTLCCSGPVPILRDR*KLQFPG Trigger: ACCTGGAAATTGTAACTTCCAACGGTCCCTCAAAAT...TGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTTTGCCCACACACAGCTaGAGATTGTGGTCAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSLRFIESSVTCRILLEALPTHS*RLWSKS Trigger: AGACTTTGACCACAATCTTCAGCTGTGTGTGGGCAA...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR TCA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTTTATTGAGAGTTCTGTaGCCTGTAGGATACTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSLRFIESSVTCRILLEALLRVL*PVGYFW Trigger: CCAGAAGTATCCTACAGGTCACAGAACTCTCAATAA...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS CCA 90 bp | CAGCCAGCCACCCGGCACATTCTCCCAGGTGGGACAAAGTTGAATTaGGATGGGAAGGGGAGTGTCCCCACAGCCAGGGTCAGGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QPATRHILPGGTKLN*DGKGSVPTARVRLA Trigger: AGCCAGCCTGACCCTGGCTGTGGGGACACTCCCCTTCCCATCCCAATTCAACTTTGTCCCACCTGGGAGAATGTGCCGGGTGGCTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS GCA 90 bp | AAGTGGCTGCAGGCCTGGGGATCCATGAGTCTCAGCTTCACCTCTTaGAGAGTGTCTGAGCCCGGCTTCAACACACCTGTTCTTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KWLQAWGSMSLSFTS*RVSEPGFNTPVLPQ Trigger: CTGGGGAAGAACAGGTGTGTTGAAGCCGGGCTCAGACACTCTGCAAGAGGTGAAGCTGAGACTCATGGATCCCCAGGCCTGCAGCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS-3UTR CAA 90 bp | AGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCAGACAGCAGGGGGCTTaGCATCCGACCGTCCATAGG | + |
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Preference number: 5 (lower is better) Translates to: RVVAEGPRVDQNEWHTLCRQQGA*HPTVHR Trigger: CCTATGGACGGTCGGATGCAAAGCCCCCTGCTGTCT...GCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CAA 90 bp | GTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTGCTCTGGAGGCTTAGGGTaGTGGCTGAGGGACCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: VVAEGPRVDQNEWHTLCCSGGLG*WLRDQG Trigger: CCCTTGGTCCCTCAGCCACAACCCTAAGCCTCCAGA...GCAGCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CAA 90 bp | CTTAGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTCCAGGTGGGACAAAGTaGAATTGGGATGGGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LRVVAEGPRVDQNEWHTLPGGTK*NWDGKG Trigger: CCCCTTCCCATCCCAATTCAACTTTGTCCCACCTGG...AAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS GCA 90 bp | AGTTCCAGCTTCCCTTTCAGGCTGGCTCAGGATCCAGGATTAATTTaGCTGCAGGATCTGGTTGATCCAGGGCCGGTAATGGGAGATTCG | + |
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Preference number: 5 (lower is better) Translates to: SSSFPFRLAQDPGLI*LQDLVDPGPVMGDS Trigger: CGAATCTCCCATTACCGGCCCTGGATCAACCAGATCCTGCAGGCAAATTAATCCTGGATCCTGAGCCAGCCTGAAAGGGAAGCTGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CAA 90 bp | GACCAGAATGAGTGGCACACACTTTGCTGCTCAGGTCCAGTTCCAGCTTCCCTTAATTTTGAGGGACCGTaGGAAGTTACAATTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DQNEWHTLCCSGPVPASLNFEGP*EVTISR Trigger: CCTGGAAATTGTAACTTCCAACGGTCCCTCAAAATT...AAGGGAAGCTGGAACTGGACCTGAGCAGCAAAGTGTGTGCCACTCATTCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CAA 90 bp | AGGGTTGTGGCTGAGGGACCAAGGGTAGACCAGAATGAGTGGCACACACTTTGCTTTTGGATGACGGAATaGCTTTATAACCTCAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: RVVAEGPRVDQNEWHTLCFWMTE*LYNLKL Trigger: AAGCTTGAGGTTATAAAGCAATTCCGTCATCCAAAA...GCAAAGTGTGTGCCACTCATTCTGGTCTACCCTTGGTCCCTCAGCCACAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS-3UTR CAA 90 bp | TCTTCACTGAGGTTTATTGAGAGTTCTGTGACCTGTAGGATACTTCTGGAGGCTAACCACCACAAAATTTaGAGGGACCGTTGGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: SSLRFIESSVTCRILLEANHHKI*RDRWKL Trigger: TAACTTCCAACGGTCCCTCAAAATTTTGTGGTGGTT...AGCCTCCAGAAGTATCCTACAGGTCACAGAACTCTCAATAAACCTCAGTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250378.7 |
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| CDS CAA 90 bp | CCAGCCAGCCACCCGGCACATTCTCCCAGGTGGGACAAAGTTGAATaGGGATGGGAAGGGGAGTGTCCCCACAGCCAGGGTCAGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PASHPAHSPRWDKVE*GWEGECPHSQGQAG Trigger: GCCAGCCTGACCCTGGCTGTGGGGACACTCCCCTTCCCATCCCAATTCAACTTTGTCCCACCTGGGAGAATGTGCCGGGTGGCTGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS GCA 72 bp | GTAATGGGAGATTCGGGTGAAGACAGCAGGGGGCTTTaGATCCGACCGTCCATAGGATACGATGCCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: VMGDSGEDSRGL*IRPSIGYDALG Trigger: GCCCAGGGCATCGTATCCTATGGACGGTCGGATGCAAAGCCCCCTGCTGTCTTCACCCGAATCTCCCATTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS CCA 72 bp | GCACATTCTCCCAGGTGGGACAAAGTTGAATTGGGATaGGAAGGGGAGTGTCCCCACAGCCAGGGTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AHSPRWDKVELG*EGECPHSQGQA Trigger: AGCCTGACCCTGGCTGTGGGGACACTCCCCTTCCCATCCCAATTCAACTTTGTCCCACCTGGGAGAATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS GCA 72 bp | CAGGCCTGGGGATCCATGAGTCTCAGCTTCACCTCTTaGAGAGTGTCTGAGCCCGGCTTCAACACACCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QAWGSMSLSFTS*RVSEPGFNTPV Trigger: AACAGGTGTGTTGAAGCCGGGCTCAGACACTCTGCAAGAGGTGAAGCTGAGACTCATGGATCCCCAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS CAA 90 bp | GATATCGTGGTGAAGAGTAGAAGTGTTATATTTTGGATGACGGAATaGCTTTATAACCTCAAGCTTCTGCCATGTGTCTTCTTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DIVVKSRSVIFWMTE*LYNLKLLPCVFFLC Trigger: ACAGAGGAAGAAGACACATGGCAGAAGCTTGAGGTTATAAAGCAATTCCGTCATCCAAAATATAACACTTCTACTCTTCACCACGATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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| CDS CAA 72 bp | GTGAAGAGTAGAAGTGTTATATTTTGGATGACGGAATaGCTTTATAACCTCAAGCTTCTGCCATGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VKSRSVIFWMTE*LYNLKLLPCVF Trigger: GAAGACACATGGCAGAAGCTTGAGGTTATAAAGCAATTCCGTCATCCAAAATATAACACTTCTACTCTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000206446.4 ENST00000250378.7 |
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