RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLVS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177182

Ensembl transcript IDs: ENST00000325897.5, ENST00000518592.5, ENST00000518858.1, ENST00000519846.5, ENST00000520712.1, ENST00000521189.1, ENST00000522621.1, ENST00000522928.1, ENST00000523868.2, ENST00000524095.5

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCAGAACACACGTGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTaGGTGGCTGATACCACTGAAGGCCAGTGTGCAGGAGCATTGGGG +
Preference number: 1 (lower is better)
Translates to: SRTHVSAWVSCACAS*VADTTEGQCAGALG
Trigger: CCCCAATGCTCCTGCACACTGGCCTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACACGTGTGTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 90 bp TGCTCAGACCGATGGCTGGTGACAGTCACTGCAGGGGTTCAGGAGTaGAGGACCTTGTGTCAAGCAGAACACACGTGTCTGCATGGGTCA +
Preference number: 1 (lower is better)
Translates to: CSDRWLVTVTAGVQE*RTLCQAEHTCLHGS
Trigger: TGACCCATGCAGACACGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 90 bp CTCTCAAGTCTTTGTCCAACTTTGGCTGCTCAGACCGATGGCTGGTaGCAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAG +
Preference number: 1 (lower is better)
Translates to: LSSLCPTLAAQTDGW*QSLQGFRSGGPCVK
Trigger: CTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGACTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR GCA 90 bp TTTGTCCAACTTTGGCTGCTCAGACCGATGGCTGGTGACAGTCACTaGAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAACACAC +
Preference number: 1 (lower is better)
Translates to: FVQLWLLRPMAGDSH*RGSGVEDLVSSRTH
Trigger: GTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 90 bp TCAGGAGTGGAGGACCTTGTGTCAAGCAGAACACACGTGTCTGCATaGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAA +
Preference number: 1 (lower is better)
Translates to: SGVEDLVSSRTHVSA*VSCACASWVADTTE
Trigger: TTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACACGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 90 bp AAAGCATCTCTCAAGTCTTTGTCCAACTTTGGCTGCTCAGACCGATaGCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTG +
Preference number: 1 (lower is better)
Translates to: KASLKSLSNFGCSDR*LVTVTAGVQEWRTL
Trigger: CAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGACTTGAGAGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 90 bp GGGTCATGCTCCATGATTGAATATTTACCCTCTCAGCAACAACCATaGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGTTGTGGGGG +
Preference number: 1 (lower is better)
Translates to: GSCSMIEYLPSQQQP*SFSTSLMVAGGLWG
Trigger: CCCCCACAACCCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGTAAATATTCAATCATGGAGCATGACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 90 bp CATGAGACATCTCCTCTGCAGACACATGCTGCACTAATGGGCTTTTaGGCTGCCTGTGGTAACTCACATTGCTCAGATGAAATAATCGTA +
Preference number: 1 (lower is better)
Translates to: HETSPLQTHAALMGF*AACGNSHCSDEIIV
Trigger: TACGATTATTTCATCTGAGCAATGTGAGTTACCACAGGCAGCTCAAAAGCCCATTAGTGCAGCATGTGTCTGCAGAGGAGATGTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR GCA 90 bp GAGGGTTGTGGGGGCAAGGGTAAATGGTTTGATAGCACTTTTCTTTaGTGTAGTGACCCAGTTGAGGCAACTGGAATGGATTCATTAATC +
Preference number: 1 (lower is better)
Translates to: EGCGGKGKWFDSTFL*CSDPVEATGMDSLI
Trigger: GATTAATGAATCCATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCCACAACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 90 bp ACTTCAGTACTTGCATATTTAGCCATCCATATGGGTCATGCTCCATaGTTGAATATTTACCCTCTCAGCAACAACCATGGTCTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: TSVLAYLAIHMGHAP*LNIYPLSNNHGLSP
Trigger: TGGAGAAAGACCATGGTTGTTGCTGAGAGGGTAAATATTCAATCATGGAGCATGACCCATATGGATGGCTAAATATGCAAGTACTGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 90 bp TTACTGGAGATACTATTGTCTCAGGGCTTTGTACTACATGAAACTTaGCAGTGGTGTCTGTACAGTTTAACTCTGATACATTTACTTGGA +
Preference number: 1 (lower is better)
Translates to: LLEILLSQGFVLHET*QWCLYSLTLIHLLG
Trigger: TCCAAGTAAATGTATCAGAGTTAAACTGTACAGACACCACTGTCAAGTTTCATGTAGTACAAAGCCCTGAGACAATAGTATCTCCAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 90 bp ATGGAAATTACTGGAGATACTATTGTCTCAGGGCTTTGTACTACATaGAACTTGACAGTGGTGTCTGTACAGTTTAACTCTGATACATTT +
Preference number: 1 (lower is better)
Translates to: MEITGDTIVSGLCTT*NLTVVSVQFNSDTF
Trigger: AAATGTATCAGAGTTAAACTGTACAGACACCACTGTCAAGTTTCATGTAGTACAAAGCCCTGAGACAATAGTATCTCCAGTAATTTCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACATGTGCTTCCTGGGTaGCTGATACCACTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRHVLPG*LIPLKA
Trigger: GGCCTTCAGTGGTATCAGCCACCCAGGAAGCACATG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CAA 90 bp CGATGGCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTaGTGTCAAGCAGAACACACGTGTCTGCATGGGTCAGTTGTGCAT +
Preference number: 2 (lower is better)
Translates to: RWLVTVTAGVQEWRT*CQAEHTCLHGSVVH
Trigger: ATGCACAACTGACCCATGCAGACACGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATGTGCATGTGCTTCCTaGGTGGCTGATACCACTGAA +
Preference number: 2 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRCACAS*VADTTE
Trigger: TTCAGTGGTATCAGCCACCCAGGAAGCACATGCACA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAACACACGTGTCTGCATaGGTCAGTTGTGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRTHVSA*VSCACA
Trigger: AGCACATGCACAACTGACCCATGCAGACACGTGTGT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGCTGGTGACAGTCACTaGAGGGGTTCAGGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRAGDSH*RGSGVE
Trigger: CTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGGCTGCTCAGACCGATaGCTGGTGACAGTCACTGCA +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRGCSDR*LVTVTA
Trigger: TGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCAGACCGATGGCTGGTaGCAGTCACTGCAGGGGTTC +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMQTDGW*QSLQGF
Trigger: GAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTGCATGGGTCAGTTGTaGATGTGCTTCCTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRCMGQL*MCFLGG
Trigger: GCCACCCAGGAAGCACATGCACAACTGACCCATGCA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTTGTCCAACTTTGGCTaGTCAGACCGATGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLSNFG*SDRWLV
Trigger: CACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGCACTAATGGGCTTTTaGGCTGCCTGTGGTAACTCA +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRALMGF*AACGNS
Trigger: TGAGTTACCACAGGCAGCTCAAAAGCCCATTAGTGC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCAGAACACACGTGTCTaGATGGGTCAGTTGTGCATG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRQNTRV*MGQLCM
Trigger: CATGCACAACTGACCCATGCAGACACGTGTGTTCTG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCATGTGCTTCCTGGGTaGCTGATACCACTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMHVLPG*LIPLKA
Trigger: GGCCTTCAGTGGTATCAGCCACCCAGGAAGCACATG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCAGGGGTTCAGGAGTaGAGGACCTTGTGTCAAGCA +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMAGVQE*RTLCQA
Trigger: TGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGTCTTTGTCCAACTTTaGCTGCTCAGACCGATGGCT +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRVFVQL*LLRPMA
Trigger: AGCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGAC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTTTAACGTCAGCTCATaGCAGTCAGCTAGTGACCTG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRFNVSS*QSASDL
Trigger: CAGGTCACTAGCTGACTGTCATGAGCTGACGTTAAA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTCCTCTGCAGACACATaGTGCACTAATGGGCTTTTG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRSSADT*CTNGLL
Trigger: CAAAAGCCCATTAGTGCAGCATGTGTCTGCAGAGGA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CAA 90 bp ATCTTTAATGGTTGCAGGAGGGTTGTGGGGGCAAGGGTAAATGGTTaGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTG +
Preference number: 2 (lower is better)
Translates to: IFNGCRRVVGARVNG*IALFFAVVTQLRQL
Trigger: CAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCCACAACCCTCCTGCAACCATTAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGAGAGGGTCCCTGTGTaGTACCTCAGAAAAATTCTT +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRERVPV*YLRKIL
Trigger: AAGAATTTTTCTGAGGTATCACACAGGGACCCTCTC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGGGCTTTGTACTACATaGAACTTGACAGTGGTGTCT +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRGLCTT*NLTVVS
Trigger: AGACACCACTGTCAAGTTTCATGTAGTACAAAGCCC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGAAATACCCAGACCTATaGGAACATGCTCTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRKYPDL*EHALRL
Trigger: CAGCCTAAGAGCATGTTCTCATAGGTCTGGGTATTT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGTACTACATGAAACTTaGCAGTGGTGTCTGTACAGT +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRVLHET*QWCLYS
Trigger: ACTGTACAGACACCACTGTCAAGTTTCATGTAGTAC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTTTAACGTCAGCTCATaGCAGTCAGCTAGTGACCTG +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMFNVSS*QSASDL
Trigger: CAGGTCACTAGCTGACTGTCATGAGCTGACGTTAAA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGATAGCACTTTTCTTTaGTGTAGTGACCCAGTTGAG +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRDSTFL*CSDPVE
Trigger: CTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGTACTACATGAAACTTaGCAGTGGTGTCTGTACAGT +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMVLHET*QWCLYS
Trigger: ACTGTACAGACACCACTGTCAAGTTTCATGTAGTAC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCTCACATTGCTCAGATaGAATAATCGTATTTCACGT +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLTLLR*NNRISR
Trigger: ACGTGAAATACGATTATTTCATCTGAGCAATGTGAG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTTAATTTTCAAAAACTaGAGAGGGTCCCTGTGTGAT +
Preference number: 2 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLIFKN*RGSLCD
Trigger: ATCACACAGGGACCCTCTCCAGTTTTTGAAAATTAA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCTCACATTGCTCAGATaGAATAATCGTATTTCACGT +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMLTLLR*NNRISR
Trigger: ACGTGAAATACGATTATTTCATCTGAGCAATGTGAG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTTAATTTTCAAAAACTaGAGAGGGTCCCTGTGTGAT +
Preference number: 2 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMLIFKN*RGSLCD
Trigger: ATCACACAGGGACCCTCTCCAGTTTTTGAAAATTAA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR GCA 72 bp CTTTGGCTGCTCAGACCGATGGCTGGTGACAGTCACTaGAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGC +
Preference number: 3 (lower is better)
Translates to: LWLLRPMAGDSH*RGSGVEDLVSS
Trigger: GCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGTCTGCATGGGTCAGTaGTGCATGTGCTTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRVCMGQ*CMCFLG
Trigger: ACCCAGGAAGCACATGCACAACTGACCCATGCAGAC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 72 bp CTTTGTCCAACTTTGGCTGCTCAGACCGATGGCTGGTaGCAGTCACTGCAGGGGTTCAGGAGTGGAGGACCT +
Preference number: 3 (lower is better)
Translates to: LCPTLAAQTDGW*QSLQGFRSGGP
Trigger: AGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 72 bp CACGTGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTaGGTGGCTGATACCACTGAAGGCCAGTGTGCAGGA +
Preference number: 3 (lower is better)
Translates to: HVSAWVSCACAS*VADTTEGQCAG
Trigger: TCCTGCACACTGGCCTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 72 bp CGATGGCTGGTGACAGTCACTGCAGGGGTTCAGGAGTaGAGGACCTTGTGTCAAGCAGAACACACGTGTCTG +
Preference number: 3 (lower is better)
Translates to: RWLVTVTAGVQE*RTLCQAEHTCL
Trigger: CAGACACGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGCCATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR GCA 72 bp AGTGGAGGACCTTGTGTCAAGCAGAACACACGTGTCTaGATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: SGGPCVKQNTRV*MGQLCMCFLGG
Trigger: GCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACACGTGTGTTCTGCTTGACACAAGGTCCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CCA 72 bp GAGGACCTTGTGTCAAGCAGAACACACGTGTCTGCATaGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGAT +
Preference number: 3 (lower is better)
Translates to: EDLVSSRTHVSA*VSCACASWVAD
Trigger: ATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACACGTGTGTTCTGCTTGACACAAGGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCAGGAGTGGAGGACCTaGTGTCAAGCAGAACACACG +
Preference number: 3 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRQEWRT*CQAEHT
Trigger: CGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGAGTCTTTGTCCAACTTaGGCTGCTCAGACCGATGGC +
Preference number: 3 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRSLCPT*AAQTDG
Trigger: GCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGACT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGTCTGCATGGGTCAGTaGTGCATGTGCTTCCTGGGT +
Preference number: 3 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMVCMGQ*CMCFLG
Trigger: ACCCAGGAAGCACATGCACAACTGACCCATGCAGAC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCAGGAGTGGAGGACCTaGTGTCAAGCAGAACACACG +
Preference number: 3 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMQEWRT*CQAEHT
Trigger: CGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 72 bp TCTCCTCTGCAGACACATGCTGCACTAATGGGCTTTTaGGCTGCCTGTGGTAACTCACATTGCTCAGATGAA +
Preference number: 3 (lower is better)
Translates to: SPLQTHAALMGF*AACGNSHCSDE
Trigger: TTCATCTGAGCAATGTGAGTTACCACAGGCAGCTCAAAAGCCCATTAGTGCAGCATGTGTCTGCAGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGCATCTCTCAAGTCTTaGTCCAACTTTGGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRASLKS*SNFGCS
Trigger: TGAGCAGCCAAAGTTGGACAAAGACTTGAGAGATGC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR GCA 72 bp GGGGGCAAGGGTAAATGGTTTGATAGCACTTTTCTTTaGTGTAGTGACCCAGTTGAGGCAACTGGAATGGAT +
Preference number: 3 (lower is better)
Translates to: GGKGKWFDSTFL*CSDPVEATGMD
Trigger: ATCCATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCATCTCTCAAGTCTTaGTCCAACTTTGGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMASLKS*SNFGCS
Trigger: TGAGCAGCCAAAGTTGGACAAAGACTTGAGAGATGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 72 bp TTTCACGTCCATGTGTCTTCCTTTAACGTCAGCTCATaGCAGTCAGCTAGTGACCTGACAAGAGATGTGACA +
Preference number: 3 (lower is better)
Translates to: FHVHVSSFNVSS*QSASDLTRDVT
Trigger: TGTCACATCTCTTGTCAGGTCACTAGCTGACTGTCATGAGCTGACGTTAAAGGAAGACACATGGACGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTATTGTCTCAGGGCTTaGTACTACATGAAACTTGAC +
Preference number: 3 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMYCLRA*YYMKLD
Trigger: GTCAAGTTTCATGTAGTACAAAGCCCTGAGACAATA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 72 bp CTTGCATATTTAGCCATCCATATGGGTCATGCTCCATaGTTGAATATTTACCCTCTCAGCAACAACCATGGT +
Preference number: 3 (lower is better)
Translates to: LAYLAIHMGHAP*LNIYPLSNNHG
Trigger: ACCATGGTTGTTGCTGAGAGGGTAAATATTCAATCATGGAGCATGACCCATATGGATGGCTAAATATGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 72 bp ACTGGAGATACTATTGTCTCAGGGCTTTGTACTACATaGAACTTGACAGTGGTGTCTGTACAGTTTAACTCT +
Preference number: 3 (lower is better)
Translates to: TGDTIVSGLCTT*NLTVVSVQFNS
Trigger: AGAGTTAAACTGTACAGACACCACTGTCAAGTTTCATGTAGTACAAAGCCCTGAGACAATAGTATCTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR TCA 72 bp ATCAAAATAAGCAAACTTTGCAAATACCCAGACCTATaGGAACATGCTCTTAGGCTGAACAATTCGATGCTG +
Preference number: 3 (lower is better)
Translates to: IKISKLCKYPDL*EHALRLNNSML
Trigger: CAGCATCGAATTGTTCAGCCTAAGAGCATGTTCTCATAGGTCTGGGTATTTGCAAAGTTTGCTTATTTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACAGACCGATGGCTGGTaGCAGTCACTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRQTDGW*QSLQGF
Trigger: GAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGCTGGTGACAGTCACTaGAGGGGTTCAGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRAGDSH*RGSGVE
Trigger: CTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGGCTGCTCAGACCGATaGCTGGTGACAGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRGCSDR*LVTVTA
Trigger: TGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAAAGGCATCCGCTTGGTaGAACTTCCTGGCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRKASAW*NFLARR
Trigger: TCTCCGAGCCAGGAAGTTTCACCAAGCGGATGCCTT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCAGACCGATGGCTGGTaGCAGTCACTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKQTDGW*QSLQGF
Trigger: GAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATGCATGGGTCAGTTGTaGATGTGCTTCCTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRCMGQL*MCFLGG
Trigger: GCCACCCAGGAAGCACATGCACAACTGACCCATGCA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATCCTCGCTGCTGAACTaGGTGGGTGAGATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRSSLLN*VGEIPY
Trigger: ATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGGCTGGTTGACAAAGTaGACTCCTCCAAAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRGWLTK*TPPKRA
Trigger: TGCCCGCTTTGGAGGAGTCCACTTTGTCAACCAGCC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAAGAGCCAGGAGTGGCTaGGTGTTCTCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRRARSG*VFSFSP
Trigger: GGGAGAGAATGAGAACACCCAGCCACTCCTGGCTCT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGCAGGGGTTCAGGAGTaGAGGACCTTGTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRAGVQE*RTLCQA
Trigger: TGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACTAGAAAGCTGTGAATaGGAGCTCGGGCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRLESCE*ELGLHK
Trigger: CTTGTGGAGCCCGAGCTCTCATTCACAGCTTTCTAG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACACCTGATGGTCTGCTaGAACTGTGGCCCATTCAAC +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRHLMVC*NCGPFN
Trigger: GTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACACGAAGGATGTCTGTaGAGGAGTTCCTTCACACGG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRHEGCL*RSSFTR
Trigger: CCGTGTGAAGGAACTCCTTCACAGACATCCTTCGTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518592.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGGCTGCTCAGACCGATaGCTGGTGACAGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKGCSDR*LVTVTA
Trigger: TGCAGTGACTGTCACCAGCCATCGGTCTGAGCAGCC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CAA 72 bp GTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTaGTGTCAAGCAGAACACACGTGTCTGCATGGGTCA +
Preference number: 4 (lower is better)
Translates to: VTVTAGVQEWRT*CQAEHTCLHGS
Trigger: TGACCCATGCAGACACGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATTCTCTAGAAAGCTGTaGATGAGAGCTCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRFSRKL*MRARAP
Trigger: TGGAGCCCGAGCTCTCATTCACAGCTTTCTAGAGAA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGGCCAGTTTAAGGATTaGAGGTGTCAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRGQFKD*RCQFGG
Trigger: GCCTCCAAACTGACACCTTCAATCCTTAAACTGGCC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGCACTAATGGGCTTTTaGGCTGCCTGTGGTAACTCA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRALMGF*AACGNS
Trigger: TGAGTTACCACAGGCAGCTCAAAAGCCCATTAGTGC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACCCTTCTTCTGGATGTaGTTGCACAGACAATGGCAG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRPFFWM*LHRQWQ
Trigger: CTGCCATTGTCTGTGCAATCACATCCAGAAGAAGGG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACAGAACACACGTGTCTaGATGGGTCAGTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRQNTRV*MGQLCM
Trigger: CATGCACAACTGACCCATGCAGACACGTGTGTTCTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGAGAGCCAGGAGTGGCTaGGTGTTCTCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKRARSG*VFSFSP
Trigger: GGGAGAGAATGAGAACACCCAGCCACTCCTGGCTCT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCATGTGCTTCCTGGGTaGCTGATACCACTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKHVLPG*LIPLKA
Trigger: GGCCTTCAGTGGTATCAGCCACCCAGGAAGCACATG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGTCTTTGTCCAACTTTaGCTGCTCAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRVFVQL*LLRPMA
Trigger: AGCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGAC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCTAGAAAGCTGTGAATaGGAGCTCGGGCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKLESCE*ELGLHK
Trigger: CTTGTGGAGCCCGAGCTCTCATTCACAGCTTTCTAG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGAGGTGTCCTCGCTGCTaGACTGGGTGGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRRCPRC*TGWVRS
Trigger: GGATCTCACCCACCCAGTTCAGCAGCGAGGACACCT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCTGGTCCCATTCACCTaGTGGTCTGCTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKLVPFT*WSAETV
Trigger: CACAGTTTCAGCAGACCATCAGGTGAATGGGACCAG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACACGAAGGATGTCTGTaGAGGAGTTCCTACTCTGAT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRHEGCL*RSSYSD
Trigger: ATCAGAGTAGGAACTCCTTCACAGACATCCTTCGTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTGTACCAGGGCTGGTTaGCAAAGTGGACTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKCTRAG*QSGLLQ
Trigger: TTGGAGGAGTCCACTTTGTCAACCAGCCCTGGTACA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCAGACCGATGGCTGGTaGCAGTCACTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRQTDGW*QSLQGF
Trigger: GAACCCCTGCAGTGACTGTCACCAGCCATCGGTCTG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATTTAACGTCAGCTCATaGCAGTCAGCTAGTGACCTG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRFNVSS*QSASDL
Trigger: CAGGTCACTAGCTGACTGTCATGAGCTGACGTTAAA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTTGTCCAACTTTGGCTaGTCAGACCGATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKLSNFG*SDRWLV
Trigger: CACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTTCTCTAGAAAGCTGTaGATGAGAGCTCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKFSRKL*MRARAP
Trigger: TGGAGCCCGAGCTCTCATTCACAGCTTTCTAGAGAA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATTTCATCAGCTTGGGTaGGCATTCTCTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRFHQLG*AFSLQI
Trigger: AATCTGGAGAGAGAATGCTCACCCAAGCTGATGAAA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGCAGGAGCATTGGGGTaGCTCAGGGTTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRAGALG*LRVQSR
Trigger: TCTGGACTGAACCCTGAGTCACCCCAATGCTCCTGC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGAGAGGGTCCCTGTGTaGTACCTCAGAAAAATTCTT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRERVPV*YLRKIL
Trigger: AAGAATTTTTCTGAGGTATCACACAGGGACCCTCTC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCAGAACACACGTGTCTaGATGGGTCAGTTGTGCATG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKQNTRV*MGQLCM
Trigger: CATGCACAACTGACCCATGCAGACACGTGTGTTCTG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATCAGGCCCTATGTGGTaGTGTTCATCCAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRSGPMW*CSSKTE
Trigger: TTCTGTTTTGGATGAACACCACCACATAGGGCCTGA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGGTCTGCTGAAACTGTaGCCCATTCAACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRGLLKL*PIQQCF
Trigger: AAAACACTGTTGAATGGGCCACAGTTTCAGCAGACC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGACACACGTGTCTGCATaGGTCAGTTGTGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKTHVSA*VSCACA
Trigger: AGCACATGCACAACTGACCCATGCAGACACGTGTGT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGTCTTTGTCCAACTTTaGCTGCTCAGACCGATGGCT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKVFVQL*LLRPMA
Trigger: AGCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGAC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAGGTGTCCTCGCTGCTaGACTGGGTGGGTGAGATCC +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMRCPRC*TGWVRS
Trigger: GGATCTCACCCACCCAGTTCAGCAGCGAGGACACCT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGAAGGAGTTCCTACTCTaGTCCCAATTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKKEFLL*SQLAAN
Trigger: GTTTGCAGCCAATTGGGATCAGAGTAGGAACTCCTT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAATGAAGCCATTTATCTaGAGCTCCGGATCTTCGATT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRMKPFI*SSGSSI
Trigger: AATCGAAGATCCGGAGCTTCAGATAAATGGCTTCAT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGTACTACATGAAACTTaGCAGTGGTGTCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRVLHET*QWCLYS
Trigger: ACTGTACAGACACCACTGTCAAGTTTCATGTAGTAC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAATGGGTCATGCTCCATaGTTGAATATTTACCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRMGHAP*LNIYPL
Trigger: GAGAGGGTAAATATTCAATCATGGAGCATGACCCAT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAAGATTCGAGGACGTATaGTTCACGTGCATTGCATTA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRRFEDV*FTCIAL
Trigger: TAATGCAATGCACGTGAAGCATACGTCCTCGAATCT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTCCTCTGCAGACACATaGTGCACTAATGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKSSADT*CTNGLL
Trigger: CAAAAGCCCATTAGTGCAGCATGTGTCTGCAGAGGA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGATAGCACTTTTCTTTaGTGTAGTGACCCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRDSTFL*CSDPVE
Trigger: CTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTCCTCGCTGCTGAACTaGGTGGGTGAGATCCCCTAT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRSSLLN*VGEIPY
Trigger: ATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTGGAAGAAGAGAGACTaGTCCCATTCACCTGATGGT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKWKKRD*SHSPDG
Trigger: ACCATCAGGTGAATGGGACCAGTCTCTCTTCTTCCA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAATCTTTTCATCAGCTTaGGTGAGCATTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRIFSSA*VSILSP
Trigger: TGGAGAGAGAATGCTCACCCAAGCTGATGAAAAGAT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGAGAGCCAGGAGTGGCTaGGTGTTCTCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRRARSG*VFSFSP
Trigger: GGGAGAGAATGAGAACACCCAGCCACTCCTGGCTCT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCATGTGCTTCCTGGGTaGCTGATACCACTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRHVLPG*LIPLKA
Trigger: GGCCTTCAGTGGTATCAGCCACCCAGGAAGCACATG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGCAGGGGTTCAGGAGTaGAGGACCTTGTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRAGVQE*RTLCQA
Trigger: TGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGGGGGCAAGGGTAAATaGTTTGATAGCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRGGKGK*FDSTFL
Trigger: AAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCTGAACTGGGTGGGTaGGATCCCCTATTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMAELGG*DPLFWQ
Trigger: CTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCTGGTCCCATTCACCTaGTGGTCTGCTGAAACTGTG +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLVPFT*WSAETV
Trigger: CACAGTTTCAGCAGACCATCAGGTGAATGGGACCAG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGGGTGTATTAGCTGGTaGAGGCTGTTTAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRGCISW*RLFKLF
Trigger: AAACAATTTAAACAGCCTTCACCAGCTAATACACCC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCAGGAGCATTGGGGTaGCTCAGGGTTCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMAGALG*LRVQSR
Trigger: TCTGGACTGAACCCTGAGTCACCCCAATGCTCCTGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGAGAGGGTCCCTGTGTaGTACCTCAGAAAAATTCTT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKERVPV*YLRKIL
Trigger: AAGAATTTTTCTGAGGTATCACACAGGGACCCTCTC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGGGCTTTGTACTACATaGAACTTGACAGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKGLCTT*NLTVVS
Trigger: AGACACCACTGTCAAGTTTCATGTAGTACAAAGCCC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAAAACAGAAGCAAAACTaGGGCCATTGCTTACCAAAA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRKQKQN*GHCLPK
Trigger: TTTTGGTAAGCAATGGCCTCAGTTTTGCTTCTGTTT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAATGCTTCACGTGCATTaGATTATAGGATGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRMLHVH*IIGCVS
Trigger: ACTCACACATCCTATAATGCAATGCACGTGAAGCAT...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCTGGTGACAGTCACTaGAGGGGTTCAGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMAGDSH*RGSGVE
Trigger: CTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTCAGGCCCTATGTGGTaGTGTTCATCCAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKSGPMW*CSSKTE
Trigger: TTCTGTTTTGGATGAACACCACCACATAGGGCCTGA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGGTCTGCTGAAACTGTaGCCCATTCAACAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKGLLKL*PIQQCF
Trigger: AAAACACTGTTGAATGGGCCACAGTTTCAGCAGACC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGAGTGTGCAGGAGCATTaGGGTGACTCAGGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRSVQEH*GDSGFS
Trigger: ACTGAACCCTGAGTCACCCCAATGCTCCTGCACACT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
3UTR CAA 72 bp GGTTGCAGGAGGGTTGTGGGGGCAAGGGTAAATGGTTaGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GCRRVVGARVNG*IALFFAVVTQL
Trigger: CAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCCACAACCCTCCTGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAAGGCATCCGCTTGGTaGAACTTCCTGGCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMKASAW*NFLARR
Trigger: TCTCCGAGCCAGGAAGTTTCACCAAGCGGATGCCTT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCGGTACTGGAAATACTaGGCCAGGAGTCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRRYWKY*ARSLKA
Trigger: TGCCTTTAGACTCCTGGCTCAGTATTTCCAGTACCG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGATGAAGCCATTTATCTaGAGCTCCGGATCTTCGATT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKMKPFI*SSGSSI
Trigger: AATCGAAGATCCGGAGCTTCAGATAAATGGCTTCAT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGGCCAGTTTAAGGATTaGAGGTGTCAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRGQFKD*RCQFGG
Trigger: GCCTCCAAACTGACACCTTCAATCCTTAAACTGGCC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGTACTACATGAAACTTaGCAGTGGTGTCTGTACAGT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKVLHET*QWCLYS
Trigger: ACTGTACAGACACCACTGTCAAGTTTCATGTAGTAC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGTCATGCTCCATGATTaGATATTTACCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKVMLHD*IFTLSA
Trigger: TGCTGAGAGGGTAAATATTCAATCATGGAGCATGAC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGATGGGTCATGCTCCATaGTTGAATATTTACCCTCTC +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKMGHAP*LNIYPL
Trigger: GAGAGGGTAAATATTCAATCATGGAGCATGACCCAT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGAGATTCGAGGACGTATaGTTCACGTGCATTGCATTA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKRFEDV*FTCIAL
Trigger: TAATGCAATGCACGTGAAGCATACGTCCTCGAATCT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGATAGCACTTTTCTTTaGTGTAGTGACCCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKDSTFL*CSDPVE
Trigger: CTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACTTGTCTTTAAGAAATaGCTTGATGAGTGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRLVFKK*LDECVE
Trigger: CTCTACACACTCATCAAGCCATTTCTTAAAGACAAG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGATCTTTTCATCAGCTTaGGTGAGCATTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKIFSSA*VSILSP
Trigger: TGGAGAGAGAATGCTCACCCAAGCTGATGAAAAGAT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTGTGCATGTGCTTCCTaGGTGGCTGATACCACTGAA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRCACAS*VADTTE
Trigger: TTCAGTGGTATCAGCCACCCAGGAAGCACATGCACA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGGGGGCAAGGGTAAATaGTTTGATAGCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKGGKGK*FDSTFL
Trigger: AAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCACGAAGGATGTCTGTaGAGGAGTTCCTACTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRHEGCL*RSSYSD
Trigger: ATCAGAGTAGGAACTCCTTCACAGACATCCTTCGTG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGGGTGTATTAGCTGGTaGAGGCTGTTTAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKGCISW*RLFKLF
Trigger: AAACAATTTAAACAGCCTTCACCAGCTAATACACCC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGACGGCCGCCCAGCCTTaGTTTGGGAATGTATTTCTG +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMTAAQP*FGNVFL
Trigger: CAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGAATGCCGGGATCATCTaGCTTGAAGTTTTTGAACAT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKNAGII*LEVFEH
Trigger: ATGTTCAAAAACTTCAAGGCAGATGATCCCGGCATT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATTTAAATTGTTTCCATaGAGGAAAATCCGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRFKLFP*RKIRFL
Trigger: CAGGAAACGGATTTTCCTGCATGGAAACAATTTAAA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGATGCTTCACGTGCATTaGATTATAGGATGTGTGAGT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKMLHVH*IIGCVS
Trigger: ACTCACACATCCTATAATGCAATGCACGTGAAGCAT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTTGTCCAACTTTGGCTaGTCAGACCGATGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMLSNFG*SDRWLV
Trigger: CACCAGCCATCGGTCTGAGCAGCCAAAGTTGGACAA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACATCCATATGGGTCATaGTCCATGATTGAATATTTA +
Preference number: 4 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRHPYGS*SMIEYL
Trigger: TAAATATTCAATCATGGAGCATGACCCATATGGATG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTGGAAGAAGAGAGACTaGTCCCATTCACCTGATGGT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRWKKRD*SHSPDG
Trigger: ACCATCAGGTGAATGGGACCAGTCTCTCTTCTTCCA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCTTGGTGAAACTTCCTaGCTCGGAGAAATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLGETS*LGEISG
Trigger: TCCTGAGATTTCTCCGAGCCAGGAAGTTTCACCAAG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAGTGTGCAGGAGCATTaGGGTGACTCAGGGTTCAGT +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMSVQEH*GDSGFS
Trigger: ACTGAACCCTGAGTCACCCCAATGCTCCTGCACACT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCGGTACTGGAAATACTaGGCCAGGAGTCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMRYWKY*ARSLKA
Trigger: TGCCTTTAGACTCCTGGCTCAGTATTTCCAGTACCG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGGCCAGTTTAAGGATTaGAGGTGTCAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMGQFKD*RCQFGG
Trigger: GCCTCCAAACTGACACCTTCAATCCTTAAACTGGCC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTTTCATCAGCTTGGGTaGGCATTCTCTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRFHQLG*AFSLQI
Trigger: AATCTGGAGAGAGAATGCTCACCCAAGCTGATGAAA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCTCACATTGCTCAGATaGAATAATCGTATTTCACGT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKLTLLR*NNRISR
Trigger: ACGTGAAATACGATTATTTCATCTGAGCAATGTGAG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCACTAATGGGCTTTTaGGCTGCCTGTGGTAACTCA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMALMGF*AACGNS
Trigger: TGAGTTACCACAGGCAGCTCAAAAGCCCATTAGTGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCATTCAGGCCCTATGTaGTGGTGTTCATCCAAAACA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRHSGPM*WCSSKT
Trigger: TGTTTTGGATGAACACCACCACATAGGGCCTGAATG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTGTGCATGTGCTTCCTaGGTGGCTGATACCACTGAA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMCACAS*VADTTE
Trigger: TTCAGTGGTATCAGCCACCCAGGAAGCACATGCACA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTTAATTTTCAAAAACTaGAGAGGGTCCCTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKLIFKN*RGSLCD
Trigger: ATCACACAGGGACCCTCTCCAGTTTTTGAAAATTAA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAAGGAGTTCCTACTCTaGTCCCAATTGGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMKEFLL*SQLAAN
Trigger: GTTTGCAGCCAATTGGGATCAGAGTAGGAACTCCTT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGTCATGCTCCATGATTaGATATTTACCCTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRVMLHD*IFTLSA
Trigger: TGCTGAGAGGGTAAATATTCAATCATGGAGCATGAC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGCAAAAGAATCTTCCTaGCGTAATGGTCTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRAKESS*RNGLGF
Trigger: AAAACCGAGACCATTACGGCAGGAAGATTCTTTTGC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTTTAAATTGTTTCCATaGAGGAAAATCCGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKFKLFP*RKIRFL
Trigger: CAGGAAACGGATTTTCCTGCATGGAAACAATTTAAA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTCCTCTGCAGACACATaGTGCACTAATGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMSSADT*CTNGLL
Trigger: CAAAAGCCCATTAGTGCAGCATGTGTCTGCAGAGGA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCATCCATATGGGTCATaGTCCATGATTGAATATTTA +
Preference number: 4 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKHPYGS*SMIEYL
Trigger: TAAATATTCAATCATGGAGCATGACCCATATGGATG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCTTGGTGAAACTTCCTaGCTCGGAGAAATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMLGETS*LGEISG
Trigger: TCCTGAGATTTCTCCGAGCCAGGAAGTTTCACCAAG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGATCTTTTCATCAGCTTaGGTGAGCATTCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRIFSSA*VSILSP
Trigger: TGGAGAGAGAATGCTCACCCAAGCTGATGAAAAGAT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGGGGGCAAGGGTAAATaGTTTGATAGCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRGGKGK*FDSTFL
Trigger: AAGAAAAGTGCTATCAAACCATTTACCCTTGCCCCC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGGGTGTATTAGCTGGTaGAGGCTGTTTAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRGCISW*RLFKLF
Trigger: AAACAATTTAAACAGCCTTCACCAGCTAATACACCC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTTTCATCAGCTTGGGTaGGCATTCTCTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMFHQLG*AFSLQI
Trigger: AATCTGGAGAGAGAATGCTCACCCAAGCTGATGAAA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAAATACCCAGACCTATaGGAACATGCTCTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMKYPDL*EHALRL
Trigger: CAGCCTAAGAGCATGTTCTCATAGGTCTGGGTATTT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGAATGCCGGGATCATCTaGCTTGAAGTTTTTGAACAT +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRNAGII*LEVFEH
Trigger: ATGTTCAAAAACTTCAAGGCAGATGATCCCGGCATT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTCTTCTGGATGTGATTaGACAGACAATGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMSSGCD*TDNGSS
Trigger: ACTGCTGCCATTGTCTGTGCAATCACATCCAGAAGA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAAACAGAAGCAAAACTaGGGCCATTGCTTACTTCAC +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMKQKQN*GHCLLH
Trigger: GTGAAGTAAGCAATGGCCTCAGTTTTGCTTCTGTTT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325897.5
CDS-3UTR TCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGATGGGTCATGCTCCATaGTTGAATATTTACCCTCTC +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMMGHAP*LNIYPL
Trigger: GAGAGGGTAAATATTCAATCATGGAGCATGACCCAT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCAAAAGAATCTTCCTaGCGTAATGGTCTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMAKESS*RNGLGF
Trigger: AAAACCGAGACCATTACGGCAGGAAGATTCTTTTGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR GCA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGAGATTCGAGGACGTATaGTTCACGTGCATTGCATTA +
Preference number: 4 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMRFEDV*FTCIAL
Trigger: TAATGCAATGCACGTGAAGCATACGTCCTCGAATCT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCTTGTCTTTAAGAAATaGCTTGATGAGTGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLVFKK*LDECVE
Trigger: CTCTACACACTCATCAAGCCATTTCTTAAAGACAAG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTTTAAATTGTTTCCATaGAGGAAAATCCGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRFKLFP*RKIRFL
Trigger: CAGGAAACGGATTTTCCTGCATGGAAACAATTTAAA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR GCA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCATCCATATGGGTCATaGTCCATGATTGAATATTTA +
Preference number: 4 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRHPYGS*SMIEYL
Trigger: TAAATATTCAATCATGGAGCATGACCCATATGGATG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS GCA 90 bp CAGGGAACACGCTGCCCAGAAAGGTGCCTGCCTGTCTCTAGACGGTaGAAGCGGAGGCTGGTTGATGTTCTGTGCTGGAGAACAGACCTC +
Preference number: 5 (lower is better)
Translates to: QGTRCPERCLPVSRR*KRRLVDVLCWRTDL
Trigger: GAGGTCTGTTCTCCAGCACAGAACATCAACCAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGCACCTTTCTGGGCAGCGTGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACAAGGGGCTGTGATTTaGGTAGGAGGCGTGTGCGCC +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRQGAVI*VGGVCA
Trigger: GGCGCACACGCCTCCTACCAAAATCACAGCCCCTTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS TCA 90 bp CCCAGCCTTGCTTTGGGAATGTATTTCTGCAGGTGTCCTCGCTGCTaGACTGGGTGGGTGAGATCCCCTATTCTGGCAGGTTCGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PSLALGMYFCRCPRC*TGWVRSPILAGSGS
Trigger: TGAGCCCGAACCTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000521189.1
ENST00000523868.2
CDS TCA 90 bp AGGGCTGATCCCTCCTCTCCAGTCTCTGCCCATCCTGCCACTGCCTaGAATCTCCGGACAAGCGTTCAAGGAAGTCATCACAAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RADPSSPVSAHPATA*NLRTSVQGSHHKGQ
Trigger: CTGCCCTTTGTGATGACTTCCTTGAACGCTTGTCCGGAGATTTCAGGCAGTGGCAGGATGGGCAGAGACTGGAGAGGAGGGATCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 90 bp GATGTCTGTGAAGGAGTTCCTTCACACGGCCGCCCAGCCTTGCTTTaGGAATGTATTTCTGCAGGTGTCCTCGCTGCTGAACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DVCEGVPSHGRPALL*ECISAGVLAAELGG
Trigger: CCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGGAACTCCTTCACAGACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518592.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACCGCCCAGCCTTGCTTaGGGAATGTATTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRPPSLA*GMYFCR
Trigger: CCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGACACGGCCGCCCAGCCTaGCTTTGGGAATGTATTTCT +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRHGRPA*LWECIS
Trigger: AGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTG...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGCAAAACTGAGGCCATaGCTTACTTCACACGGCCGC +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRAKLRP*LTSHGR
Trigger: GCGGCCGTGTGAAGTAAGCAATGGCCTCAGTTTTGC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000325897.5
CDS TCA 90 bp TCATCAGTGAGGTGCCTTACAGGAGATATACGCCAACAGCAGGGCTaGTCCCTCCTCTCCAGTCTCTGCCCATCCTGCCACTGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: SSVRCLTGDIRQQQG*SLLSSLCPSCHCLK
Trigger: TTTCAGGCAGTGGCAGGATGGGCAGAGACTGGAGAGGAGGGATCAGCCCTGCTGTTGGCGTATATCTCCTGTAAGGCACCTCACTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 90 bp CTTTTTAACAAGGCCACACCACAGGGAACACGCTGCCCAGAAAGGTaGCTGCCTGTCTCTAGACGGTGCAAGCGGAGGCTGGTTGATGTT +
Preference number: 5 (lower is better)
Translates to: LFNKATPQGTRCPER*LPVSRRCKRRLVDV
Trigger: AACATCAACCAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGCACCTTTCTGGGCAGCGTGTTCCCTGTGGTGTGGCCTTGTTAAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 90 bp AAACTGAGGCCATTGCTTACTTCACACGGCCGCCCAGCCTTGCTTTaGGAATGTATTTCTGCAGGTGTCCTCGCTGCTGAACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: KLRPLLTSHGRPALL*ECISAGVLAAELGG
Trigger: CCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGTAAGCAATGGCCTCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000521189.1
CDS CCA 90 bp TCACAGCTAAGAAAACTGCCTTCACACGGCCGCCCAGCCTTGCTTTaGGAATGTATTTCTGCAGGTGTCCTCGCTGCTGAACTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SQLRKLPSHGRPALL*ECISAGVLAAELGG
Trigger: CCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGGCAGTTTTCTTAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATCTAAAGGCATCCGCTaGGTGAAACTTCCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRSKGIR*VKLPGS
Trigger: CGAGCCAGGAAGTTTCACCAAGCGGATGCCTTTAGA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS CCA 90 bp CTCCGGACAAGCGTTCAAGGAAGTCATCACAAAGGGCAGCAGCAGTaGGCAGGACATCCTTGTGGCCATGGTGGGGAAAATGAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: LRTSVQGSHHKGQQQ*AGHPCGHGGENEVC
Trigger: ACACACTTCATTTTCCCCACCATGGCCACAAGGATGTCCTGCCCACTGCTGCTGCCCTTTGTGATGACTTCCTTGAACGCTTGTCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCACGGCCGCCCAGCCTaGCTTTGGGAATGTATTTCT +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKHGRPA*LWECIS
Trigger: AGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGTCTGCATGGGTCAGTaGTGCATGTGCTTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKVCMGQ*CMCFLG
Trigger: ACCCAGGAAGCACATGCACAACTGACCCATGCAGAC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCAGGAGTGGAGGACCTaGTGTCAAGCAGAACACACG +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKQEWRT*CQAEHT
Trigger: CGTGTGTTCTGCTTGACACAAGGTCCTCCACTCCTG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGCTGTAGTGACCCAGTaGAGGCAACTGGAATGGATT +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRAVVTQ*RQLEWI
Trigger: AATCCATTCCAGTTGCCTCAACTGGGTCACTACAGC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS CCA 90 bp CCTTGCTTTGGGAATGTATTTCTGCAGGTGTCCTCGCTGCTGAACTaGGTGGGTGAGATCCCCTATTCTGGCAGGTTCGGGCTCAGATTT +
Preference number: 5 (lower is better)
Translates to: PCFGNVFLQVSSLLN*VGEIPYSGRFGLRF
Trigger: AAATCTGAGCCCGAACCTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000521189.1
ENST00000523868.2
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGATGTACCAGGGCTGGTaGACAAAGTGGACTCCTCCA +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKMYQGW*TKWTPP
Trigger: TGGAGGAGTCCACTTTGTCAACCAGCCCTGGTACAT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGAGTCTTTGTCCAACTTaGGCTGCTCAGACCGATGGC +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKSLCPT*AAQTDG
Trigger: GCCATCGGTCTGAGCAGCCAAAGTTGGACAAAGACT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGAGCATCTCTCAAGTCTTaGTCCAACTTTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRASLKS*SNFGCS
Trigger: TGAGCAGCCAAAGTTGGACAAAGACTTGAGAGATGC...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS TCA 90 bp TGGGAATGTATTTCTGCAGGTGTCCTCGCTGCTGAACTGGGTGGGTaGGATCCCCTATTCTGGCAGGTTCGGGCTCAGATTTCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: WECISAGVLAAELGG*DPLFWQVRAQISLE
Trigger: TTCTAGAGAAATCTGAGCCCGAACCTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000521189.1
ENST00000523868.2
CDS GCA 90 bp CAGAAAGCATGGGTCGAGAGTGCTTTGGAACACAGTGGCCATCTGTaGCCAAAAGCCAGATTACGAAAAGTGATTGGGTCCCAAGGTCGG +
Preference number: 5 (lower is better)
Translates to: QKAWVESALEHSGHL*PKARLRKVIGSQGR
Trigger: CCGACCTTGGGACCCAATCACTTTTCGTAATCTGGCTTTTGGGCACAGATGGCCACTGTGTTCCAAAGCACTCTCGACCCATGCTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATGTAAATGGGTCATCTaGGCCAAATCTCCGTTCCAA +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRCKWVI*AKSPFQ
Trigger: TTGGAACGGAGATTTGGCCAAGATGACCCATTTACA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGCTGTAGTGACCCAGTaGAGGCAACTGGAATGGATT +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKAVVTQ*RQLEWI
Trigger: AATCCATTCCAGTTGCCTCAACTGGGTCACTACAGC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS TCA 90 bp TTACGAAAAGTGATTGGGTCCCAAGGTCGGTGCACAAAGCCCACTTaGATCCAAATGGACCTGAAGCATGTAGGGAACTATGGGGGTCGG +
Preference number: 5 (lower is better)
Translates to: LRKVIGSQGRCTKPT*IQMDLKHVGNYGGR
Trigger: CCGACCCCCATAGTTCCCTACATGCTTCAGGTCCATTTGGATTCAAGTGGGCTTTGTGCACCGACCTTGGGACCCAATCACTTTTCGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 90 bp AAGAAGAGAGACTGGTCCCATTCACCTGATGGTCTGCTGAAACTGTaGCCCATTCAACAGTGTTTTACTACCAGGCTGCCCCGGAACAGA +
Preference number: 5 (lower is better)
Translates to: KKRDWSHSPDGLLKL*PIQQCFTTRLPRNR
Trigger: TCTGTTCCGGGGCAGCCTGGTAGTAAAACACTGTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTGAATGGGACCAGTCTCTCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
ENST00000523868.2
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCCGCCCAGCCTTGCTTaGGGAATGTATTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRPPSLA*GMYFCR
Trigger: CCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATATGCTTCACGTGCATaGCATTATAGGATGTGTGAG +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRYASRA*HYRMCE
Trigger: CTCACACATCCTATAATGCAATGCACGTGAAGCATA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGATCTTTTCATCAGCTaGGGTGAGCATTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKDLFIS*GEHSLS
Trigger: GGAGAGAGAATGCTCACCCAAGCTGATGAAAAGATC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGCATCTCTCAAGTCTTaGTCCAACTTTGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKASLKS*SNFGCS
Trigger: TGAGCAGCCAAAGTTGGACAAAGACTTGAGAGATGC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGCAAAACTGAGGCCATaGCTTACCAAAAACGGCCAT +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKAKLRP*LTKNGH
Trigger: ATGGCCGTTTTTGGTAAGCAATGGCCTCAGTTTTGC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS TCA 90 bp TGGAACACAGTGGCCATCTGTGCCCAAAAGCCAGATTACGAAAAGTaGTTGGGTCCCAAGGTCGGTGCACAAAGCCCACTTGAATCCAAA +
Preference number: 5 (lower is better)
Translates to: WNTVAICAQKPDYEK*LGPKVGAQSPLESK
Trigger: TTTGGATTCAAGTGGGCTTTGTGCACCGACCTTGGGACCCAATCACTTTTCGTAATCTGGCTTTTGGGCACAGATGGCCACTGTGTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTCTAAAGGCATCCGCTaGGTGAAACTTCCTGGCTCG +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRSKGIR*VKLPGS
Trigger: CGAGCCAGGAAGTTTCACCAAGCGGATGCCTTTAGA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGATGTACCAGGGCTGGTaGACAAAGTGGACTCCTCCA +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRMYQGW*TKWTPP
Trigger: TGGAGGAGTCCACTTTGTCAACCAGCCCTGGTACAT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS TCA 90 bp TATTTTGGAAGAAGAGAGACTGGTCCCATTCACCTGATGGTCTGCTaGAACTGTGGCCCATTCAACAGTGTTTTACTACCAGGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: YFGRRETGPIHLMVC*NCGPFNSVLLPGCP
Trigger: GGGGCAGCCTGGTAGTAAAACACTGTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTGAATGGGACCAGTCTCTCTTCTTCCAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
ENST00000523868.2
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCCGCCCAGCCTTGCTTaGGGAATGTATTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMPPSLA*GMYFCR
Trigger: CCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp GCTGGTGACAGTCACTGCAGGGGTTCAGGAGTGGAGGACCTTGTGTCAAGCAGATGTCAGTTTGGAGGCTaGTTTGAAGGAAAAATTACT +
Preference number: 5 (lower is better)
Translates to: AGDSHCRGSGVEDLVSSRCQFGG*FEGKIT
Trigger: AGTAATTTTTCCTTCAAACAAGCCTCCAAACTGACA...TCTGCTTGACACAAGGTCCTCCACTCCTGAACCCCTGCAGTGACTGTCACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGATCCGTTTCCTGGTCTaGTCTTTAAGAAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKIRFLV*SLRNGL
Trigger: CAAGCCATTTCTTAAAGACAAGACCAGGAAACGGAT...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS GCA 90 bp CTCCTGCTAGCTAGTCTTGAATTTTGGCTCCCGTATGTAATGAAATaGAATACTCCTCCAAACCCTGGGTCAGCCAAACCTTCCACATGG +
Preference number: 5 (lower is better)
Translates to: LLLASLEFWLPYVMK*NTPPNPGSAKPSTW
Trigger: CCATGTGGAAGGTTTGGCTGACCCAGGGTTTGGAGGAGTATTGCATTTCATTACATACGGGAGCCAAAATTCAAGACTAGCTAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 90 bp CTGTTCAGAGGGCAGACCTATGTCATCTTACTCAGAATAAGCAAGTaGTTTTTAACAAGGCCACACCACAGGGAACACGCTGCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LFRGQTYVILLRISK*FLTRPHHREHAAQK
Trigger: TTTCTGGGCAGCGTGTTCCCTGTGGTGTGGCCTTGTTAAAAAGCACTTGCTTATTCTGAGTAAGATGACATAGGTCTGCCCTCTGAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 90 bp ATTTTGGCTCCCGTATGTAATGAAATGCAATACTCCTCCAAACCCTaGGTCAGCCAAACCTTCCACATGGAGGCTTCTCTGAGAGTCTTC +
Preference number: 5 (lower is better)
Translates to: ILAPVCNEMQYSSKP*VSQTFHMEASLRVF
Trigger: GAAGACTCTCAGAGAAGCCTCCATGTGGAAGGTTTGGCTGACCCAGGGTTTGGAGGAGTATTGCATTTCATTACATACGGGAGCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGATGTACCAGGGCTGGTaGACAAAGTGGACTCCTCCA +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMMYQGW*TKWTPP
Trigger: TGGAGGAGTCCACTTTGTCAACCAGCCCTGGTACAT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGGATCTTTTCATCAGCTaGGGTGAGCATTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRDLFIS*GEHSLS
Trigger: GGAGAGAGAATGCTCACCCAAGCTGATGAAAAGATC...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTATTGTCTCAGGGCTTaGTACTACATGAAACTTGAC +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKYCLRA*YYMKLD
Trigger: GTCAAGTTTCATGTAGTACAAAGCCCTGAGACAATA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGTTACTGGAGATACTATaGTCTCAGGGCTTTGTACTA +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKLLEIL*SQGFVL
Trigger: TAGTACAAAGCCCTGAGACAATAGTATCTCCAGTAA...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGGCAAGGGTAAATGGTTaGATAGCACTTTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKARVNG*IALFFA
Trigger: AGCAAAGAAAAGTGCTATCAAACCATTTACCCTTGC...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS TCA 90 bp CAATTTTTGCACATCCATGTGGGTTCTGAGTGGTCAAAAAGACAGTaGATAGTGGCTGCTCTGTTCCTCATCAGTGAGGTGCCTTACAGG +
Preference number: 5 (lower is better)
Translates to: QFLHIHVGSEWSKRQ*IVAALFLISEVPYR
Trigger: CCTGTAAGGCACCTCACTGATGAGGAACAGAGCAGCCACTATTCACTGTCTTTTTGACCACTCAGAACCCACATGGATGTGCAAAAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS-3UTR CAA 90 bp TGTCTGCATGGGTCAGTTGTGCATGTGCTTCCTGGGTGGCTGATACCACTGAAGCAAAATAAGCAAACTTaGCAAATACCCAGACCTATG +
Preference number: 5 (lower is better)
Translates to: CLHGSVVHVLPGWLIPLKQNKQT*QIPRPM
Trigger: CATAGGTCTGGGTATTTGCAAAGTTTGCTTATTTTG...CTTCAGTGGTATCAGCCACCCAGGAAGCACATGCACAACTGACCCATGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCTGTAGTGACCCAGTaGAGGCAACTGGAATGGATT +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMAVVTQ*RQLEWI
Trigger: AATCCATTCCAGTTGCCTCAACTGGGTCACTACAGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS GCA 90 bp AAGTGGTCATACAAACAGGAGGTAATTTCATCTGCTTCCTTTGTTTaGACTGAAGTGATCCACTTAAGCGCAAGCTCGGTAGCACGTGAC +
Preference number: 5 (lower is better)
Translates to: KWSYKQEVISSASFV*TEVIHLSASSVARD
Trigger: GTCACGTGCTACCGAGCTTGCGCTTAAGTGGATCACTTCAGTGCAAACAAAGGAAGCAGATGAAATTACCTCCTGTTTGTATGACCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS CCA 90 bp GTTTCCATGCAGGAAAATCCGTTTCCTGGTCTTGTCTTTAAGAAATaGCTTGATGAGTGTGTAGAGGGCATGAATGTACCAGGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: VSMQENPFPGLVFKK*LDECVEGMNVPGLV
Trigger: AACCAGCCCTGGTACATTCATGCCCTCTACACACTCATCAAGCCATTTCTTAAAGACAAGACCAGGAAACGGATTTTCCTGCATGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000520712.1
ENST00000522928.1
ENST00000524095.5
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGATCCGTTTCCTGGTCTaGTCTTTAAGAAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRIRFLV*SLRNGL
Trigger: CAAGCCATTTCTTAAAGACAAGACCAGGAAACGGAT...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGATCTTTTCATCAGCTaGGGTGAGCATTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMDLFIS*GEHSLS
Trigger: GGAGAGAGAATGCTCACCCAAGCTGATGAAAAGATC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTGTAAATGGGTCATCTaGGCCAAATCTCCGTTCCAA +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMCKWVI*AKSPFQ
Trigger: TTGGAACGGAGATTTGGCCAAGATGACCCATTTACA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTATTGTCTCAGGGCTTaGTACTACATGAAACTTGAC +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRYCLRA*YYMKLD
Trigger: GTCAAGTTTCATGTAGTACAAAGCCCTGAGACAATA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS TCA 90 bp AAATGGGTCATCTTGGCCAAATCTCCGTTCCAAGTGTTTAACTTCTaGTATTTTGGAAGAAGAGAGACTGGTCCCATTCACCTGATGGTC +
Preference number: 5 (lower is better)
Translates to: KWVILAKSPFQVFNF*YFGRRETGPIHLMV
Trigger: GACCATCAGGTGAATGGGACCAGTCTCTCTTCTTCCAAAATATCAGAAGTTAAACACTTGGAACGGAGATTTGGCCAAGATGACCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTTAACTTCTGATATTTaGGAAGAAGAGAGACTGGTC +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRLTSDI*EEERLV
Trigger: GACCAGTCTCTCTTCTTCCAAAATATCAGAAGTTAA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000519846.5
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGTGTCAGTTTGGAGGCTaGTTTGAAGGAAAAATTACT +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRCQFGG*FEGKIT
Trigger: AGTAATTTTTCCTTCAAACAAGCCTCCAAACTGACA...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGATCCGTTTCCTGGTCTaGTCTTTAAGAAATGGCTTG +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMIRFLV*SLRNGL
Trigger: CAAGCCATTTCTTAAAGACAAGACCAGGAAACGGAT...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTATGCTTCACGTGCATaGCATTATAGGATGTGTGAG +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMYASRA*HYRMCE
Trigger: CTCACACATCCTATAATGCAATGCACGTGAAGCATA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp ACCCTCTCAGCAACAACCATGGTCTTTCTCCACATCTTTAATGGTTGCAGGAGGCAAAATAAGCAAACTTaGCAAATACCCAGACCTATG +
Preference number: 5 (lower is better)
Translates to: TLSATTMVFLHIFNGCRRQNKQT*QIPRPM
Trigger: CATAGGTCTGGGTATTTGCAAAGTTTGCTTATTTTG...CCTCCTGCAACCATTAAAGATGTGGAGAAAGACCATGGTTGTTGCTGAGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS TCA 90 bp TTAACTTCTGATATTTTGGAAGAAGAGAGACTGGTCCCATTCACCTaGTGGTCTGCTGAAACTGTGGCCCATTCAACAGTGTTTTACTAC +
Preference number: 5 (lower is better)
Translates to: LTSDILEEERLVPFT*WSAETVAHSTVFYY
Trigger: GTAGTAAAACACTGTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTGAATGGGACCAGTCTCTCTTCTTCCAAAATATCAGAAGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
CDS TCA 90 bp ATAAAAGCTTTAAAGAGAGAGAGATCAGATGTTCAGAGGCTTAGGTaGGAGGAGGTTGGAGAAAAGGAGTTAGAGCTAAGAGGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: IKALKRERSDVQRLR*EEVGEKELELRGSD
Trigger: GTCACTTCCTCTTAGCTCTAACTCCTTTTCTCCAACCTCCTCTCACCTAAGCCTCTGAACATCTGATCTCTCTCTCTTTAAAGCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS GCA 90 bp GATCTGAGAATGTCATATTTTGCTATATACATAGCTGCCTATAACTaGCGTCTATGGGGAGAGGGTCACTCCATAGAGTTAATCTGCCTA +
Preference number: 5 (lower is better)
Translates to: DLRMSYFAIYIAAYN*RLWGEGHSIELICL
Trigger: TAGGCAGATTAACTCTATGGAGTGACCCTCTCCCCATAGACGGCAGTTATAGGCAGCTATGTATATAGCAAAATATGACATTCTCAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGTTACTGGAGATACTATaGTCTCAGGGCTTTGTACTA +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMLLEIL*SQGFVL
Trigger: TAGTACAAAGCCCTGAGACAATAGTATCTCCAGTAA...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGGCAAGGGTAAATGGTTaGATAGCACTTTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMARVNG*IALFFA
Trigger: AGCAAAGAAAAGTGCTATCAAACCATTTACCCTTGC...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS-3UTR CAA 90 bp TGGTTTGATAGCACTTTTCTTTGCTGTAGTGACCCAGTTGAGGCAACTGGAATGCAAAATAAGCAAACTTaGCAAATACCCAGACCTATG +
Preference number: 5 (lower is better)
Translates to: WFDSTFLCCSDPVEATGMQNKQT*QIPRPM
Trigger: CATAGGTCTGGGTATTTGCAAAGTTTGCTTATTTTG...CATTCCAGTTGCCTCAACTGGGTCACTACAGCAAAGAAAAGTGCTATCAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
CDS GCA 72 bp CCACACCACAGGGAACACGCTGCCCAGAAAGGTGCCTaGCTGTCTCTAGACGGTGCAAGCGGAGGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: PHHREHAAQKGA*LSLDGASGGWL
Trigger: CAACCAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGCACCTTTCTGGGCAGCGTGTTCCCTGTGGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 72 bp AAGGCCACACCACAGGGAACACGCTGCCCAGAAAGGTaGCTGCCTGTCTCTAGACGGTGCAAGCGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: KATPQGTRCPER*LPVSRRCKRRL
Trigger: CAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGCACCTTTCTGGGCAGCGTGTTCCCTGTGGTGTGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp GGAGGGTCAGTTGAACCCGGGAGGCGGAGATTGCAGTaGGCCGAGATCATACCACTGCTCTCCAGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GGSVEPGRRRLQ*AEIIPLLSSLA
Trigger: TGCCAGGCTGGAGAGCAGTGGTATGATCTCGGCTCACTGCAATCTCCGCCTCCCGGGTTCAACTGACCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 72 bp AGGCAGGAGGGTCAGTTGAACCCGGGAGGCGGAGATTaGAGTGAGCCGAGATCATACCACTGCTCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RQEGQLNPGGGD*SEPRSYHCSPA
Trigger: GGCTGGAGAGCAGTGGTATGATCTCGGCTCACTGCAATCTCCGCCTCCCGGGTTCAACTGACCCTCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 72 bp CGCTGCCCAGAAAGGTGCCTGCCTGTCTCTAGACGGTaGAAGCGGAGGCTGGTTGATGTTCTGTGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: RCPERCLPVSRR*KRRLVDVLCWR
Trigger: TCTCCAGCACAGAACATCAACCAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGCACCTTTCTGGGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 72 bp GTGCTTTTTAACAAGGCCACACCACAGGGAACACGCTaGCCAGAAAGGTGCCTGCCTGTCTCTAGACGGTGC +
Preference number: 6 (lower is better)
Translates to: VLFNKATPQGTR*PERCLPVSRRC
Trigger: GCACCGTCTAGAGACAGGCAGGCACCTTTCTGGGCAGCGTGTTCCCTGTGGTGTGGCCTTGTTAAAAAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 72 bp GGGAATGTATTTCTGCAGGTGTCCTCGCTGCTGAACTaGGTGGGTGAGATCCCCTATTCTGGCAGGTTCGGG +
Preference number: 6 (lower is better)
Translates to: GNVFLQVSSLLN*VGEIPYSGRFG
Trigger: CCCGAACCTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000521189.1
ENST00000523868.2
CDS CAA 72 bp GCCTGCCTGTCTCTAGACGGTGCAAGCGGAGGCTGGTaGATGTTCTGTGCTGGAGAACAGACCTCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: ACLSLDGASGGW*MFCAGEQTSLS
Trigger: TGACAGAGAGGTCTGTTCTCCAGCACAGAACATCAACCAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CAA 90 bp CAGAAAGGTGCCTGCCTGTCTCTAGACGGTGCAAGCGGAGGCTGGTaGATGTTCTGTGCTGGAGAACAGACCTCTCTGTCAGGTGAGAGA +
Preference number: 6 (lower is better)
Translates to: QKGACLSLDGASGGW*MFCAGEQTSLSGER
Trigger: TCTCTCACCTGACAGAGAGGTCTGTTCTCCAGCACAGAACATCAACCAGCCTCCGCTTGCACCGTCTAGAGACAGGCAGGCACCTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp ATTTCTGCAGGTGTCCTCGCTGCTGAACTGGGTGGGTaGGATCCCCTATTCTGGCAGGTTCGGGCTCAGATT +
Preference number: 6 (lower is better)
Translates to: ISAGVLAAELGG*DPLFWQVRAQI
Trigger: AATCTGAGCCCGAACCTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000521189.1
ENST00000523868.2
CDS GCA 72 bp TCTGTGAAGGAGTTCCTTCACACGGCCGCCCAGCCTTaGTTTGGGAATGTATTTCTGCAGGTGTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: SVKEFLHTAAQP*FGNVFLQVSSL
Trigger: CAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGGAACTCCTTCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518592.5
CDS CAA 72 bp CTGAGGCCATTGCTTACTTCACACGGCCGCCCAGCCTaGCTTTGGGAATGTATTTCTGCAGGTGTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: LRPLLTSHGRPA*LWECISAGVLA
Trigger: AGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGTAAGCAATGGCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000521189.1
CDS CAA 72 bp GTCTGTGAAGGAGTTCCTTCACACGGCCGCCCAGCCTaGCTTTGGGAATGTATTTCTGCAGGTGTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: VCEGVPSHGRPA*LWECISAGVLA
Trigger: AGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGGAACTCCTTCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518592.5
CDS TCA 72 bp GCTTTGGGAATGTATTTCTGCAGGTGTCCTCGCTGCTaGACTGGGTGGGTGAGATCCCCTATTCTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ALGMYFCRCPRC*TGWVRSPILAG
Trigger: ACCTGCCAGAATAGGGGATCTCACCCACCCAGTTCAGCAGCGAGGACACCTGCAGAAATACATTCCCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000521189.1
ENST00000523868.2
CDS TCA 72 bp CTTCCAATGACAGCAGGATGGCACGAAGGATGTCTGTaGAGGAGTTCCTGGAATCCCAGCACTTTGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LPMTAGWHEGCL*RSSWNPSTLGG
Trigger: GCCTCCCAAAGTGCTGGGATTCCAGGAACTCCTTCACAGACATCCTTCGTGCCATCCTGCTGTCATTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524095.5
CDS CAA 72 bp CAGCTAAGAAAACTGCCTTCACACGGCCGCCCAGCCTaGCTTTGGGAATGTATTTCTGCAGGTGTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: QLRKLPSHGRPA*LWECISAGVLA
Trigger: AGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGGCAGTTTTCTTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519846.5
CDS CCA 72 bp GACTGGTCCCATTCACCTGATGGTCTGCTGAAACTGTaGCCCATTCAACAGTGTTTTACTACCAGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: DWSHSPDGLLKL*PIQQCFTTRLP
Trigger: GGGCAGCCTGGTAGTAAAACACTGTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTGAATGGGACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
ENST00000523868.2
CDS CAA 72 bp CTACGTGGATACCAGAAAGCATGGGTCGAGAGTGCTTaGGAACACAGTGGCCATCTGTGCCCAAAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LRGYQKAWVESA*EHSGHLCPKAR
Trigger: TCTGGCTTTTGGGCACAGATGGCCACTGTGTTCCAAAGCACTCTCGACCCATGCTTTCTGGTATCCACGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CAA 72 bp TTAGGCCACTGGAACAATGAGACGTGGGCTGTCCTCTaGACTGAAGGCCTTACCTCTTGGGTTCTTGGAGCA +
Preference number: 6 (lower is better)
Translates to: LGHWNNETWAVL*TEGLTSWVLGA
Trigger: TGCTCCAAGAACCCAAGAGGTAAGGCCTTCAGTCAAGAGGACAGCCCACGTCTCATTGTTCCAGTGGCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522621.1
CDS TCA 72 bp CTATGTGGTGGTGTTCATCCAAAACAGAAGCAAAACTaGGGCCATTGCTTACTTCACACGGCCGCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LCGGVHPKQKQN*GHCLLHTAAQP
Trigger: AGGCTGGGCGGCCGTGTGAAGTAAGCAATGGCCTCAGTTTTGCTTCTGTTTTGGATGAACACCACCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325897.5
ENST00000521189.1
CDS GCA 72 bp TGGGTCGAGAGTGCTTTGGAACACAGTGGCCATCTGTaGCCAAAAGCCAGATTACGAAAAGTGATTGGGTCC +
Preference number: 6 (lower is better)
Translates to: WVESALEHSGHL*PKARLRKVIGS
Trigger: GGACCCAATCACTTTTCGTAATCTGGCTTTTGGGCACAGATGGCCACTGTGTTCCAAAGCACTCTCGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS GCA 72 bp AAAGGTAACAAATACCTTCACACGGCCGCCCAGCCTTaGTTTGGGAATGTATTTCTGCAGGTGTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: KGNKYLHTAAQP*FGNVFLQVSSL
Trigger: CAGCGAGGACACCTGCAGAAATACATTCCCAAAGCAAGGCTGGGCGGCCGTGTGAAGGTATTTGTTACCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523868.2
CDS CCA 72 bp TACGTGGATACCAGAAAGCATGGGTCGAGAGTGCTTTaGAACACAGTGGCCATCTGTGCCCAAAAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: YVDTRKHGSRVL*NTVAICAQKPD
Trigger: ATCTGGCTTTTGGGCACAGATGGCCACTGTGTTCCAAAGCACTCTCGACCCATGCTTTCTGGTATCCACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CAA 90 bp ATTACGAAAAGTGATTGGGTCCCAAGGTCGGTGCACAAAGCCCACTaGAATCCAAATGGACCTGAAGCATGTAGGGAACTATGGGGGTCG +
Preference number: 6 (lower is better)
Translates to: ITKSDWVPRSVHKAH*NPNGPEACRELWGS
Trigger: CGACCCCCATAGTTCCCTACATGCTTCAGGTCCATTTGGATTCAAGTGGGCTTTGTGCACCGACCTTGGGACCCAATCACTTTTCGTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp AAGACAGTGAATAGTGGCTGCTCTGTTCCTCATCAGTaGGGTGCCTTACAGGAGATATACGCCAACAGCAGG +
Preference number: 6 (lower is better)
Translates to: KTVNSGCSVPHQ*GALQEIYANSR
Trigger: CCTGCTGTTGGCGTATATCTCCTGTAAGGCACCTCACTGATGAGGAACAGAGCAGCCACTATTCACTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp GTGATTGGGTCCCAAGGTCGGTGCACAAAGCCCACTTaGATCCAAATGGACCTGAAGCATGTAGGGAACTAT +
Preference number: 6 (lower is better)
Translates to: VIGSQGRCTKPT*IQMDLKHVGNY
Trigger: ATAGTTCCCTACATGCTTCAGGTCCATTTGGATTCAAGTGGGCTTTGTGCACCGACCTTGGGACCCAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 72 bp CCCGTATGTAATGAAATGCAATACTCCTCCAAACCCTaGGTCAGCCAAACCTTCCACATGGAGGCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: PVCNEMQYSSKP*VSQTFHMEASL
Trigger: CAGAGAAGCCTCCATGTGGAAGGTTTGGCTGACCCAGGGTTTGGAGGAGTATTGCATTTCATTACATACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CAA 72 bp AGTGATTGGGTCCCAAGGTCGGTGCACAAAGCCCACTaGAATCCAAATGGACCTGAAGCATGTAGGGAACTA +
Preference number: 6 (lower is better)
Translates to: SDWVPRSVHKAH*NPNGPEACREL
Trigger: TAGTTCCCTACATGCTTCAGGTCCATTTGGATTCAAGTGGGCTTTGTGCACCGACCTTGGGACCCAATCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp CACATCCATGTGGGTTCTGAGTGGTCAAAAAGACAGTaGATAGTGGCTGCTCTGTTCCTCATCAGTGAGGTG +
Preference number: 6 (lower is better)
Translates to: HIHVGSEWSKRQ*IVAALFLISEV
Trigger: CACCTCACTGATGAGGAACAGAGCAGCCACTATTCACTGTCTTTTTGACCACTCAGAACCCACATGGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CAA 90 bp GCTTTTACTCTACGTGGATACCAGAAAGCATGGGTCGAGAGTGCTTaGGAACACAGTGGCCATCTGTGCCCAAAAGCCAGATTACGAAAA +
Preference number: 6 (lower is better)
Translates to: AFTLRGYQKAWVESA*EHSGHLCPKARLRK
Trigger: TTTTCGTAATCTGGCTTTTGGGCACAGATGGCCACTGTGTTCCAAAGCACTCTCGACCCATGCTTTCTGGTATCCACGTAGAGTAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CAA 90 bp CAAGAGCTCATTAGAACCAGTCATTCACTGAGAGTTCCGGGAGTCTaGGCTTTTACTCTACGTGGATACCAGAAAGCATGGGTCGAGAGT +
Preference number: 6 (lower is better)
Translates to: QELIRTSHSLRVPGV*AFTLRGYQKAWVES
Trigger: ACTCTCGACCCATGCTTTCTGGTATCCACGTAGAGTAAAAGCCAAGACTCCCGGAACTCTCAGTGAATGACTGGTTCTAATGAGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp AGAAGAGAGACTGGTCCCATTCACCTGATGGTCTGCTaGAACTGTGGCCCATTCAACAGTGTTTTACTACCA +
Preference number: 6 (lower is better)
Translates to: RRETGPIHLMVC*NCGPFNSVLLP
Trigger: TGGTAGTAAAACACTGTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTGAATGGGACCAGTCTCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
ENST00000523868.2
CDS TCA 72 bp GATATTTTGGAAGAAGAGAGACTGGTCCCATTCACCTaGTGGTCTGCTGAAACTGTGGCCCATTCAACAGTG +
Preference number: 6 (lower is better)
Translates to: DILEEERLVPFT*WSAETVAHSTV
Trigger: CACTGTTGAATGGGCCACAGTTTCAGCAGACCATCAGGTGAATGGGACCAGTCTCTCTTCTTCCAAAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
ENST00000523868.2
CDS GCA 72 bp GGGCAGACCTATGTCATCTTACTCAGAATAAGCAAGTaGTTTTTAACAAGGCCACACCACAGGGAACACGCT +
Preference number: 6 (lower is better)
Translates to: GQTYVILLRISK*FLTRPHHREHA
Trigger: AGCGTGTTCCCTGTGGTGTGGCCTTGTTAAAAAGCACTTGCTTATTCTGAGTAAGATGACATAGGTCTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS TCA 72 bp TTCTACCACAGACTGAGATCTTTTCATCAGCTTGGGTaGGCATTCTCTCTCCAGATTCGAGGACGTATGCTT +
Preference number: 6 (lower is better)
Translates to: FYHRLRSFHQLG*AFSLQIRGRML
Trigger: AAGCATACGTCCTCGAATCTGGAGAGAGAATGCTCACCCAAGCTGATGAAAAGATCTCAGTCTGTGGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000520712.1
CDS CAA 72 bp ATTAGAACCAGTCATTCACTGAGAGTTCCGGGAGTCTaGGCTTTTACTCTACGTGGATACCAGAAAGCATGG +
Preference number: 6 (lower is better)
Translates to: IRTSHSLRVPGV*AFTLRGYQKAW
Trigger: CCATGCTTTCTGGTATCCACGTAGAGTAAAAGCCAAGACTCCCGGAACTCTCAGTGAATGACTGGTTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518858.1
CDS CCA 72 bp TTTGCTATATACATAGCTGCCTATAACTGCCGTCTATaGGGAGAGGGTCACTCCATAGAGTTAATCTGCCTA +
Preference number: 6 (lower is better)
Translates to: FAIYIAAYNCRL*GEGHSIELICL
Trigger: TAGGCAGATTAACTCTATGGAGTGACCCTCTCCCCATAGACGGCAGTTATAGGCAGCTATGTATATAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS CAA 90 bp GTGAGCATTCTCTCTCCAGATTCGAGGACGTATGCTTCACGTGCATaGCATTATAGGATGTGTGAGTATAGTCATTTTCATCGCTGTAGT +
Preference number: 6 (lower is better)
Translates to: VSILSPDSRTYASRA*HYRMCEYSHFHRCS
Trigger: ACTACAGCGATGAAAATGACTATACTCACACATCCTATAATGCAATGCACGTGAAGCATACGTCCTCGAATCTGGAGAGAGAATGCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000520712.1
ENST00000522928.1
CDS TCA 72 bp TATGTTGCCACACATGGTCTTGTATTGCGCATTCATTaGACATACCTGCAACCCTTCAATGGCCAGTTTAAG +
Preference number: 6 (lower is better)
Translates to: YVATHGLVLRIH*TYLQPFNGQFK
Trigger: CTTAAACTGGCCATTGAAGGGTTGCAGGTATGTTCAATGAATGCGCAATACAAGACCATGTGTGGCAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS TCA 72 bp TTAAAGAGAGAGAGATCAGATGTTCAGAGGCTTAGGTaGGAGGAGGTTGGAGAAAAGGAGTTAGAGCTAAGA +
Preference number: 6 (lower is better)
Translates to: LKRERSDVQRLR*EEVGEKELELR
Trigger: TCTTAGCTCTAACTCCTTTTCTCCAACCTCCTCTCACCTAAGCCTCTGAACATCTGATCTCTCTCTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS GCA 72 bp TACAAACAGGAGGTAATTTCATCTGCTTCCTTTGTTTaGACTGAAGTGATCCACTTAAGCGCAAGCTCGGTA +
Preference number: 6 (lower is better)
Translates to: YKQEVISSASFV*TEVIHLSASSV
Trigger: TACCGAGCTTGCGCTTAAGTGGATCACTTCAGTGCAAACAAAGGAAGCAGATGAAATTACCTCCTGTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS CCA 72 bp CAGGAAAATCCGTTTCCTGGTCTTGTCTTTAAGAAATaGCTTGATGAGTGTGTAGAGGGCATGAATGTACCA +
Preference number: 6 (lower is better)
Translates to: QENPFPGLVFKK*LDECVEGMNVP
Trigger: TGGTACATTCATGCCCTCTACACACTCATCAAGCCATTTCTTAAAGACAAGACCAGGAAACGGATTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000520712.1
ENST00000522928.1
ENST00000524095.5
CDS TCA 72 bp ATCTTGGCCAAATCTCCGTTCCAAGTGTTTAACTTCTaGTATTTTGGAAGAAGAGAGACTGGTCCCATTCAC +
Preference number: 6 (lower is better)
Translates to: ILAKSPFQVFNF*YFGRRETGPIH
Trigger: GTGAATGGGACCAGTCTCTCTTCTTCCAAAATATCAGAAGTTAAACACTTGGAACGGAGATTTGGCCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325897.5
ENST00000519846.5
ENST00000521189.1
ENST00000522621.1
CDS GCA 72 bp TCTCTCCAGATTCGAGGACGTATGCTTCACGTGCATTaGATTATAGGATGTGTGAGTATAGTCATTTTCATC +
Preference number: 6 (lower is better)
Translates to: SLQIRGRMLHVH*IIGCVSIVIFI
Trigger: GATGAAAATGACTATACTCACACATCCTATAATGCAATGCACGTGAAGCATACGTCCTCGAATCTGGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000520712.1
ENST00000522928.1
CDS GCA 72 bp ATGTCATATTTTGCTATATACATAGCTGCCTATAACTaGCGTCTATGGGGAGAGGGTCACTCCATAGAGTTA +
Preference number: 6 (lower is better)
Translates to: MSYFAIYIAAYN*RLWGEGHSIEL
Trigger: TAACTCTATGGAGTGACCCTCTCCCCATAGACGGCAGTTATAGGCAGCTATGTATATAGCAAAATATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521189.1
CDS CAA 72 bp CTCTCTCCAGATTCGAGGACGTATGCTTCACGTGCATaGCATTATAGGATGTGTGAGTATAGTCATTTTCAT +
Preference number: 6 (lower is better)
Translates to: LSPDSRTYASRA*HYRMCEYSHFH
Trigger: ATGAAAATGACTATACTCACACATCCTATAATGCAATGCACGTGAAGCATACGTCCTCGAATCTGGAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325897.5
ENST00000518592.5
ENST00000519846.5
ENST00000520712.1
ENST00000522928.1
CDS GCA 72 bp TTTGTAATAATGTGTCACCAGAAAGCTAAGCAGCATTaGCTTTCTGAGTTACTTCTCATAGAATCCCAGATC +
Preference number: 6 (lower is better)
Translates to: FVIMCHQKAKQH*LSELLLIESQI
Trigger: GATCTGGGATTCTATGAGAAGTAACTCAGAAAGGCAATGCTGCTTAGCTTTCTGGTGACACATTATTACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521189.1