RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLUH (Homo sapiens)

Ensembl gene IDs: ENSG00000132361

Ensembl transcript IDs: ENST00000435359.5, ENST00000570628.6, ENST00000571566.1, ENST00000572129.1, ENST00000573641.1, ENST00000574166.1, ENST00000574210.5, ENST00000574426.7, ENST00000575014.5, ENST00000575624.1, ENST00000576309.5, ENST00000576885.5, ENST00000651024.2

Found 749 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AATCCCGTCTGCGCGTCACCCACTCAGGAGTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAG +
Preference number: 1 (lower is better)
Translates to: NPVCASPTQESPTQD*LGLCTGERNGQHSQ
Trigger: CTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCGCAGACGGGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCCCCCAGCCGGGAACTaGTGGCCGCACACGCCATTC +
Preference number: 2 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRPPAGN*WPHTPF
Trigger: GAATGGCGTGTGCGGCCATCAGTTCCCGGCTGGGGG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCCCCCAGCCGGGAACTaGTGGCCGCACACGCCATTC +
Preference number: 2 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCPPAGN*WPHTPF
Trigger: GAATGGCGTGTGCGGCCATCAGTTCCCGGCTGGGGG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCCCCCAGCCGGGAACTaGTGGCCGCACACGCCATTC +
Preference number: 2 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKPPAGN*WPHTPF
Trigger: GAATGGCGTGTGCGGCCATCAGTTCCCGGCTGGGGG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: QQANPDPSVREQQPDHASRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: THSGVTHSGLARAMYRGESRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCGCAAAAACACCTTCTaGGGGGCAGGCAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRKNTF*GAGRPG
Trigger: GCCTGGCCTGCCTGCCCCGCAGAAGGTGTTTTTGCG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: QQANPDPSVREQQPDHASRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 2 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: THSGVTHSGLARAMYRGEDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCCCCCAGCCGGGAACTaGTGGCCGCACACGCCATTC +
Preference number: 2 (lower is better)
Translates to: THSGVTHSGLARAMYRGEPPAGN*WPHTPF
Trigger: GAATGGCGTGTGCGGCCATCAGTTCCCGGCTGGGGG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCCCCAGCCGGGAACTaGTGGCCGCACACGCCATTC +
Preference number: 2 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPPAGN*WPHTPF
Trigger: GAATGGCGTGTGCGGCCATCAGTTCCCGGCTGGGGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCGCAAAAACACCTTCTaGGGGGCAGGCAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: KFLLSGGDALLARSRPSPRKNTF*GAGRPG
Trigger: GCCTGGCCTGCCTGCCCCGCAGAAGGTGTTTTTGCG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCTGAGAAATCCCGTCTaGGCGTCACCCACTCAGGAG +
Preference number: 2 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRLRNPV*ASPTQE
Trigger: CTCCTGAGTGGGTGACGCGCAGACGGGATTTCTCAG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: KFLLSGGDALLARSRPSPRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGG +
Preference number: 2 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSPTQD*LGLCTG
Trigger: CCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 2 (lower is better)
Translates to: THSGVTHSGLARAMYRGERRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGG +
Preference number: 2 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSPTQD*LGLCTG
Trigger: CCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTTTCGGCCTAAACCCTaGACTTTCAGACAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: QQANPDPSVREQQPDHASFRPKP*TFRQAG
Trigger: CCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCGCAAAAACACCTTCTaGGGGGCAGGCAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRKNTF*GAGRPG
Trigger: GCCTGGCCTGCCTGCCCCGCAGAAGGTGTTTTTGCG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCGCAAAAACACCTTCTaGGGGGCAGGCAGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: THSGVTHSGLARAMYRGERKNTF*GAGRPG
Trigger: GCCTGGCCTGCCTGCCCCGCAGAAGGTGTTTTTGCG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGACACGGGGGTGGGGTaGGGTGAGACGTGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPDTGVG*GETWRK
Trigger: CTTCCTCCACGTCTCACCCCACCCCACCCCCGTGTC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGACCAGGAAGGGAGCTaGGCACCAGAGAAGCGACAT +
Preference number: 2 (lower is better)
Translates to: KFLLSGGDALLARSRPSPDQEGS*APEKRH
Trigger: ATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTTTCGGCCTAAACCCTaGACTTTCAGACAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCFRPKP*TFRQAG
Trigger: CCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGCATCATCTATTCATTaGACCAGCGCAAAAACACCT +
Preference number: 2 (lower is better)
Translates to: QQANPDPSVREQQPDHASASSIH*TSAKTP
Trigger: AGGTGTTTTTGCGCTGGTTCAATGAATAGATGATGC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGCATCATCTATTCATTaGACCAGCGCAAAAACACCT +
Preference number: 2 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRASSIH*TSAKTP
Trigger: AGGTGTTTTTGCGCTGGTTCAATGAATAGATGATGC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGCATCATCTATTCATTaGACCAGCGCAAAAACACCT +
Preference number: 2 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVASSIH*TSAKTP
Trigger: AGGTGTTTTTGCGCTGGTTCAATGAATAGATGATGC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR CCA 72 bp TGCGCGTCACCCACTCAGGAGTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAA +
Preference number: 3 (lower is better)
Translates to: CASPTQESPTQD*LGLCTGERNGQ
Trigger: TTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 3 (lower is better)
Translates to: KFLLSGGDALLARSRPSPCIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 3 (lower is better)
Translates to: THSGVTHSGLARAMYRGECIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
3UTR-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 3 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPCIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGGCGCCCCTGGTGGCTaGCGCGGTGAAGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNGAPGG*RGEVAV
Trigger: CACAGCGACTTCACCGCGGCAGCCACCAGGGGCGCC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCGAAGGCGGTGCTGCTaGTGGAGCCGACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNRRRCC*WSRPPC
Trigger: GCAAGGCGGTCGGCTCCATCAGCAGCACCGCCTTCG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCCTTGGCCAGGCCGCTaGCGCTGCTACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNPWPGR*RCYPPP
Trigger: AGGAGGAGGGTAGCAGCGCCAGCGGCCTGGCCAAGG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGACGTGGTCCAGCTGGTaGCGGGCCGGGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTTWSSW*RAGLRS
Trigger: GCTGCGGAGCCCGGCCCGCCACCAGCTGGACCACGT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTCGTTCATGGTGCGCTaGAGGGCCACGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSFMVR*RATACW
Trigger: CCAGCAGGCCGTGGCCCTGCAGCGCACCATGAACGA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGCGGTGGGGATGCTCTaGTTGCCCGCTCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNAVGML*LPAHAH
Trigger: ATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACAGCAGGTCTCGGACATaGCGCACGTGGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSRSRT*RTWMRA
Trigger: GGCCCGCATCCACGTGCGCCATGTCCGAGACCTGCT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCGCCATTCAGGTCGTTaGTGGGCGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNRHSGR*WAPRRP
Trigger: CGGCCTACGTGGCGCCCACCAACGACCTGAATGGCG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGACGTGGTCCAGCTGGTaGCGGGCCGGGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLTWSSW*RAGLRS
Trigger: GCTGCGGAGCCCGGCCCGCCACCAGCTGGACCACGT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGGTGCCGCAGGATCTTaGGGGGCCGACTCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTGAAGS*GADSCA
Trigger: AGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGGCTGGCGTTCTGCTaGATCAGCTGCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNWLAFC*ISCKAA
Trigger: GGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGGCTCCGAGGGTCTGTaGCGTCGTCTGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTGSEGL*RRLRRW
Trigger: CCATCGCCGCAGACGACGGCACAGACCCTCGGAGCC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435359.5
ENST00000570628.6
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCCGCCTTGCACGCGTTaGGGATCACCTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTPPCTR*GSPPGS
Trigger: GGAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGGAGCCGACCGCCTTaGACGCGTTGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNWSRPP*TRCGSP
Trigger: AGGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCCCGGGATCCGTAATTaGGCCCCGCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTPGIRN*APLPPA
Trigger: GGCTGGGGGAAGCGGGGCCCAATTACGGATCCCGGG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGAGTCACCGGCCCACGTaGTGCGCGCCGTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSHRPT*CAPWPL
Trigger: CAAAGGCCACGGCGCGCACCACGTGGGCCGGTGACT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000574426.7
CDS-3UTR TCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCCCCGTTTAAGAGCATaGCTGATGGCAGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNPRLRA*LMAARP
Trigger: CGGCCGAGCTGCCATCAGTCATGCTCTTAAACGGGG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000435359.5
ENST00000574426.7
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCACGTTGCCGTCAATaGCGGCCATGGCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSRCRQ*RPWRPW
Trigger: CCAGGGGCGCCATGGCCGTCATTGACGGCAACGTGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTCTCCTCGCTGGGGTTaGTGGCCATCACGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSPRWG*WPSRCR
Trigger: ACGGCAACGTGATGGCCATCAACCCCAGCGAGGAGA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGGCTGATGGCGGCTaGGAGGCCGGAGAGCTCGAC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLVADGG*EAGELD
Trigger: GTCGAGCTCTCCGGCCTCTCAGCCGCCATCAGCCAC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTACATGAGGTCCCCGTaGATCTTCCGGTTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNYMRSP*IFRFPG
Trigger: CCCGGGGAACCGGAAGATGCACGGGGACCTCATGTA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGGTGTAGGCGTCCTCTaGACGCACGCAATCCATGGC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNGVGVL*THAIHG
Trigger: GCCATGGATTGCGTGCGTGCAGAGGACGCCTACACC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCCACCGCGTTGTACGTaGGGACGCCATTCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNPPRCT*GRHSGR
Trigger: ACGACCTGAATGGCGTCCGCACGTACAACGCGGTGG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGAGGCAGCAGAGCTTGTaGCGGTGGGCGCGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLRQQSL*RWARGK
Trigger: CTTCCCCCGCGCCCACCGGCACAAGCTCTGCTGCCT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCCGCCTTGCACGCGTTaGGGATCACCTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLPPCTR*GSPPGS
Trigger: GGAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCTGGCGCATCACCTCTaGCAGCGTTGCCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTLAHHL*QRCPVH
Trigger: GTGGACGGGGCAACGCTGGCAGAGGTGATGCGCCAG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGCTCAGCGGTGGGGATaGTCTGCTTGCCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTAQRWG*SACPLT
Trigger: CGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCCGAGGGTCTGCTGTaGCGTCGTCTGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSEGLL*RRLRRW
Trigger: CCATCGCCGCAGACGACGGCACAGCAGACCCTCGGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCGCAGCTCCGAGAAGTaGTCCAGCACGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNRSSEK*SSTLPS
Trigger: GGATGGCAACGTGCTGGACCACTTCTCGGAGCTGCG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCGGACATGGCGCACGTaGATGCGGGCCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLRTWRT*MRASRT
Trigger: GGTGCGTGAGGCCCGCATCCACGTGCGCCATGTCCG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGAGCAGGTCTCGGACATaGCGCACGTGGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSRSRT*RTWMRA
Trigger: GGCCCGCATCCACGTGCGCCATGTCCGAGACCTGCT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCCTTGGCCAGGCCGCTaGCGCTGCTACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLPWPGR*RCYPPP
Trigger: AGGAGGAGGGTAGCAGCGCCAGCGGCCTGGCCAAGG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACATGTTGATGCCCCGCTaGCGCATCACCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNMLMPR*RITSAS
Trigger: GCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACAT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTACGTGGTCCAGCTGGTaGCGGGCCGGGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASTWSSW*RAGLRS
Trigger: GCTGCGGAGCCCGGCCCGCCACCAGCTGGACCACGT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCGGGCGACAAGGTGGTaGCTGAGGGCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTRATRW*LRATLR
Trigger: CCTCAAGGTGGCCCTCAGCCACCACCTTGTCGCCCG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCCTGGGGCCCCCGCTaGCGCGGGCTCGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSWGPR*RGLGSH
Trigger: ATGGCTACCGAGCCCGCGCCAGCGGGGGCCCCAGGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCCTGGGGCCCCCGCTaGCGCGGGCTCGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSWGPR*RGLGSH
Trigger: ATGGCTACCGAGCCCGCGCCAGCGGGGGCCCCAGGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCCCGGGATCCGTAATTaGGCCCCGCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLPGIRN*APLPPA
Trigger: GGCTGGGGGAAGCGGGGCCCAATTACGGATCCCGGG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGTCCTCCCGGTCCATaGGCACCTGGTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNCPPGP*APGESP
Trigger: AGGAGATTCACCAGGTGCTCATGGACCGGGAGGACA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTCACGTTGCCGTCAATaGCGGCCATGGCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSRCRQ*RPWRPW
Trigger: CCAGGGGCGCCATGGCCGTCATTGACGGCAACGTGA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCAGGTACCGCGGGTGTaGCACCACGGTCTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTQVPRV*HHGLAE
Trigger: TTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGAGTCGGGCTCCCTGGTaGCGGGGCCGCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSRAPW*RGRWLA
Trigger: AGCCAGCCAGCGGCCCCGTCACCAGGGAGCCCGACT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGCAGCCCCTCGACGCTaGGCAGCTCCGAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLAAPRR*AAPRSG
Trigger: ACCACTTCTCGGAGCTGCGCAGCGTCGAGGGGCTGC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCATGGCGCACGTGGATaGGGGCCTCACGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLHGARG*GPHAPC
Trigger: ACACGGTGCGTGAGGCCCGCATCCACGTGCGCCATG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGCTCAGGCAGGTTCTTaGGAGGCAGCTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTAQAGS*EAAPSS
Trigger: CGACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACAAGAGGAGGTACCTGTaGTCCACGAAGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNKRRYL*STKAST
Trigger: GGTGGACGCCTTCGTGGAGCACAGGTACCTCCTCTT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCCAGGCTGTGTTATCTaGAGCCCCCGGGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLPGCVI*SPRGPV
Trigger: AACCGGCCCCCGGGGGCTGCAGATAACACAGCCTGG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCTGAGAAATCCCGTCTaGGCGTCACCCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNLRNPV*ASPTQE
Trigger: CTCCTGAGTGGGTGACGCGCAGACGGGATTTCTCAG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGCTCAGCGGTGGGGATaGTCTGCTTGCCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLAQRWG*SACPLT
Trigger: CGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCCCATTTTCCCTGGGTaGCTCGGCCGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRPIFPG*LGRRRL
Trigger: GAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAAGACGTGGTCCAGCTaGTGGCGGGCCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASKTWSS*WRAGLR
Trigger: GCGGAGCCCGGCCCGCCACCAGCTGGACCACGTCTT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGAGCGCCATCTCGGGGTaGTCTTCCCCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSAISG*SSPNTS
Trigger: GCTGGTGTTCGGGGAAGACCACCCCGAGATGGCGCT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTCCTGGGGCCCCCGCTaGCGCGGGCTCGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSWGPR*RGLGSH
Trigger: ATGGCTACCGAGCCCGCGCCAGCGGGGGCCCCAGGA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGTCAGAGCCACCCACTaGGCTCTGAGGGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTVRATH*ALRAQQ
Trigger: TTGCTGGGCCCTCAGAGCCCAGTGGGTGGCTCTGAC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGACCAGGAAGGGAGCTaGGCACCAGAGAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNDQEGS*APEKRH
Trigger: ATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGCAGCACGGGCAGGGTaGAGCGGGAGCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRAARAG*SGSSVW
Trigger: CCACACGCTGCTCCCGCTCCACCCTGCCCGTGCTGC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCAGGTACCGCGGGTGTaGCACCACGGTCTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLQVPRV*HHGLAE
Trigger: TTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGGTGCCGCAGGATCTTaGGGGGCCGACTCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRGAAGS*GADSCA
Trigger: AGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGCCCGTCGTTGCCAATaGTGCCCTTGCACTCGACCG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLARRCQ*CPCTRP
Trigger: CGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGAGTTCAGGAAGTGGCTaGTGGCGGCTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSSGSG*WRLRGR
Trigger: CCGGCCTCTCAGCCGCCATCAGCCACTTCCTGAACT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCACGCCCATCCCCCTTaGAACAAGGTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTHAHPP*NKVSGR
Trigger: CCGTCCAGACACCTTGTTTCAAGGGGGATGGGCGTG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGGCGCCCCTGGTGGCTaGCGCGGTGAAGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCGAPGG*RGEVAV
Trigger: CACAGCGACTTCACCGCGGCAGCCACCAGGGGCGCC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGGCAGCAGAGCTTGTaGCGGTGGGCGCGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASRQQSL*RWARGK
Trigger: CTTCCCCCGCGCCCACCGGCACAAGCTCTGCTGCCT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTGGCTGGCGTTCTGCTaGATCAGCTGCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLWLAFC*ISCKAA
Trigger: GGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTGGAGCCGACCGCCTTaGACGCGTTGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLWSRPP*TRCGSP
Trigger: AGGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGGACCGCGTGCTCCATaGAGTCCTTCACCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTGPRAP*SPSPSQ
Trigger: CTGGCTTGGTGAAGGACTGCATGGAGCACGCGGTCC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLTGRTA*SMQSFT
Trigger: GGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGCTGCACTTTGGCCTaGCCGCTCTGGAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNCCTLA*PLWKKW
Trigger: CCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCCTTCAGGAAGCCCTaGTGCACTTTGGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSFRKP*CTLACP
Trigger: CGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAAGGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACACCGGAACTCAGCTTTaGTCTCGTAGACTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNTGTQL*SRRLGR
Trigger: TCGCCCGAGTCTACGAGAGCAAAGCTGAGTTCCGGT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCGCAAAAACACCTTCTaGGGGGCAGGCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLRKNTF*GAGRPG
Trigger: GCCTGGCCTGCCTGCCCCGCAGAAGGTGTTTTTGCG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCTAACCCAAGTGCCCTaGGCGCCGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRLTQVP*APRLLR
Trigger: CCTCAGCAGCCGCGGCGCGCAGGGCACTTGGGTTAG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCGGACATGGCGCACGTaGATGCGGGCCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRTWRT*MRASRT
Trigger: GGTGCGTGAGGCCCGCATCCACGTGCGCCATGTCCG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCCTTGGCCAGGCCGCTaGCGCTGCTACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRPWPGR*RCYPPP
Trigger: AGGAGGAGGGTAGCAGCGCCAGCGGCCTGGCCAAGG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGATGTTGATGCCCCGCTaGCGCATCACCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTMLMPR*RITSAS
Trigger: GCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACAT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCACGTGGTCCAGCTGGTaGCGGGCCGGGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPTWSSW*RAGLRS
Trigger: GCTGCGGAGCCCGGCCCGCCACCAGCTGGACCACGT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCGGAGAAGGGTCCTTaGCAGCCGGGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSEKGP*QPGAGS
Trigger: GCTCCCAGCCCCCGGCTGCCAAGGACCCTTCTCCGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCCCGGGATCCGTAATTaGGCCCCGCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASPGIRN*APLPPA
Trigger: GGCTGGGGGAAGCGGGGCCCAATTACGGATCCCGGG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGCAGCACGGGCAGGGTaGAGCGGGAGCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCAARAG*SGSSVW
Trigger: CCACACGCTGCTCCCGCTCCACCCTGCCCGTGCTGC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCCCCGTTTAAGAGCATaGCTGATGGCAGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLPRLRA*LMAARP
Trigger: CGGCCGAGCTGCCATCAGTCATGCTCTTAAACGGGG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000435359.5
ENST00000574426.7
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTGTCCTCCCGGTCCATaGGCACCTGGTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTCPPGP*APGESP
Trigger: AGGAGATTCACCAGGTGCTCATGGACCGGGAGGACA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTGCAGTCAACCCCGTTaGAGGCATCGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTCSQPR*RHRMGP
Trigger: TGGACCCATCCGATGCCTTCAACGGGGTTGACTGCA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCCAGGTCGCCGTCGGTaGAGACACTCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLPGRRR*RHSGRT
Trigger: TGTCCTTCCTGAGTGTCTTCACCGACGGCGACCTGG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCACGTTGCCGTCAATaGCGGCCATGGCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSRCRQ*RPWRPW
Trigger: CCAGGGGCGCCATGGCCGTCATTGACGGCAACGTGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTCTCCTCGCTGGGGTTaGTGGCCATCACGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSPRWG*WPSRCR
Trigger: ACGGCAACGTGATGGCCATCAACCCCAGCGAGGAGA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGGTGCCGCAGGATCTTaGGGGGCCGACTCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKGAAGS*GADSCA
Trigger: AGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCCTCGTCACGGTCGTTaGGCACCTGGTGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASPRHGR*APGAAG
Trigger: TCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGAAGGCGGTGCTGCTaGTGGAGCCGACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRRRCC*WSRPPC
Trigger: GCAAGGCGGTCGGCTCCATCAGCAGCACCGCCTTCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCGAAGGCGGTGCTGCTaGTGGAGCCGACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKRRRCC*WSRPPC
Trigger: GCAAGGCGGTCGGCTCCATCAGCAGCACCGCCTTCG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTTTCGGCCTAAACCCTaGACTTTCAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNFRPKP*TFRQAG
Trigger: CCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGCAGCCCCTCGACGCTaGGCAGCTCCGAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRAAPRR*AAPRSG
Trigger: ACCACTTCTCGGAGCTGCGCAGCGTCGAGGGGCTGC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCATGGCGCACGTGGATaGGGGCCTCACGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASHGARG*GPHAPC
Trigger: ACACGGTGCGTGAGGCCCGCATCCACGTGCGCCATG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCATGGCGCACGTGGATaGGGGCCTCACGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRHGARG*GPHAPC
Trigger: ACACGGTGCGTGAGGCCCGCATCCACGTGCGCCATG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGCGGTGATGCTGACTTaGCGGTCCTCGGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLAVMLT*RSSAVI
Trigger: GATCACAGCCGAGGACCGGCAAGTCAGCATCACCGC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGTGACACCACGGTCTTaGCGAAGTCGATGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTVTPRS*RSRWSR
Trigger: ACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCAC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSLSTW*RRILRG
Trigger: GCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGAGGCAGCAGAGCTTGTaGCGGTGGGCGCGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKRQQSL*RWARGK
Trigger: CTTCCCCCGCGCCCACCGGCACAAGCTCTGCTGCCT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAGGCAGCAGAGCTTGTaGCGGTGGGCGCGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRQQSL*RWARGK
Trigger: CTTCCCCCGCGCCCACCGGCACAAGCTCTGCTGCCT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCCAGGCCGCTGGCGCTaGTACCCTCCTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASPGRWR*YPPPHF
Trigger: GAAGTGAGGAGGAGGGTAGCAGCGCCAGCGGCCTGG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCCGCCTTGCACGCGTTaGGGATCACCTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKPPCTR*GSPPGS
Trigger: GGAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCTGGCGCATCACCTCTaGCAGCGTTGCCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASLAHHL*QRCPVH
Trigger: GTGGACGGGGCAACGCTGGCAGAGGTGATGCGCCAG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTACGTCTTGAAGATGTaGTTGGCCGAGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNYVLKM*LAERVM
Trigger: CATCACCCGCTCGGCCAAGCACATCTTCAAGACGTA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCCAGGCTGTGTTATCTaGAGCCCCCGGGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRPGCVI*SPRGPV
Trigger: AACCGGCCCCCGGGGGCTGCAGATAACACAGCCTGG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGTTACTCAGGGCCTCTaGGTAGTCGCCCATGATGTA +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNVTQGL*VVAHDV
Trigger: TACATCATGGGCGACTACGCAGAGGCCCTGAGTAAC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCTCCCTCTCTATCCCTaGACGCTCGGAGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLLPLYP*TLGEGS
Trigger: GGACCCTTCTCCGAGCGTGCAGGGATAGAGAGGGAG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTGGGGATGCTCTGCTTaGCCGCTCACGCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASWGCSA*PLTPIP
Trigger: GGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGCGGTGGGGATGCTCTaGTTGCCCGCTCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRAVGML*LPAHAH
Trigger: ATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCCGAGGGTCTGCTGTaGCGTCGTCTGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSEGLL*RRLRRW
Trigger: CCATCGCCGCAGACGACGGCACAGCAGACCCTCGGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCCGAGGGTCTGCTGTaGCGTCGTCTGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSEGLL*RRLRRW
Trigger: CCATCGCCGCAGACGACGGCACAGCAGACCCTCGGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGGGAGACTCCCTGCTaGTCGCTGCCCGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRGETPC*SLPVGR
Trigger: CCGCCCGACGGGCAGCGAGCAGCAGGGAGTCTCCCC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000570628.6
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCTAACCCAAGTGCCCTaGGCGCCGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCLTQVP*APRLLR
Trigger: CCTCAGCAGCCGCGGCGCGCAGGGCACTTGGGTTAG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCCCATTTTCCCTGGGTaGCTCGGCCGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPPIFPG*LGRRRL
Trigger: GAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
68% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGCAGGTCTCGGACATaGCGCACGTGGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSRSRT*RTWMRA
Trigger: GGCCCGCATCCACGTGCGCCATGTCCGAGACCTGCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCGCCATTCAGGTCGTTaGTGGGCGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRHSGR*WAPRRP
Trigger: CGGCCTACGTGGCGCCCACCAACGACCTGAATGGCG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCAGAGCTTGTGCCGGTaGGCGCGGGGGAAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRQSLCR*ARGKPA
Trigger: CGCCGGCTTCCCCCGCGCCCACCGGCACAAGCTCTG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGATGTTGATGCCCCGCTaGCGCATCACCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLMLMPR*RITSAS
Trigger: GCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACAT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLVGHGV*VGAQEA
Trigger: TGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCAC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTCCTTCAGCAGGACCTaGATCCCTGTTTTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSFSRT*IPVFSE
Trigger: CTCGCTGAAAACAGGGATCCAGGTCCTGCTGAAGGA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGTGAACGCGGGCTTGTaGCGACTGTCGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTVNAGL*RLSKLY
Trigger: GTACAGCTTCGACAGTCGCCACAAGCCCGCGTTCAC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGAGCCCTGCTGCACTTTaGCCTGCCCGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSPAAL*PARSGR
Trigger: TCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACACTCGGAGCTTTCCTTaGTCTTCTCATGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNTRSFP*SSHGPR
Trigger: GCGAGGACCATGAGAAGACCAAGGAAAGCTCCGAGT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGACACGGGGGTGGGGTaGGGTGAGACGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASDTGVG*GETWRK
Trigger: CTTCCTCCACGTCTCACCCCACCCCACCCCCGTGTC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGGACCAGGAAGGGAGCTaGGCACCAGAGAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTDQEGS*APEKRH
Trigger: ATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTC...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGCAGCACGGGCAGGGTaGAGCGGGAGCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPAARAG*SGSSVW
Trigger: CCACACGCTGCTCCCGCTCCACCCTGCCCGTGCTGC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTTCTTGCTCAGCGGTaGGGATGCTCTGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLVLAQR*GCSACP
Trigger: CGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAAC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCAGGTACCGCGGGTGTaGCACCACGGTCTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRQVPRV*HHGLAE
Trigger: TTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCCTCGTCACGGTCGTTaGGCACCTGGTGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCPRHGR*APGAAG
Trigger: TCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGTGGCTGATGGCGGCTaGGAGGCCGGAGAGCTCGAC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPVADGG*EAGELD
Trigger: GTCGAGCTCTCCGGCCTCTCAGCCGCCATCAGCCAC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGTTCAGGAAGTGGCTaGTGGCGGCTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSSGSG*WRLRGR
Trigger: CCGGCCTCTCAGCCGCCATCAGCCACTTCCTGAACT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGTTCAGGAAGTGGCTaGTGGCGGCTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSSGSG*WRLRGR
Trigger: CCGGCCTCTCAGCCGCCATCAGCCACTTCCTGAACT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGCGCGCCGCGGCTGCTaGGGGAAGGACGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGARRGC*GKDGVT
Trigger: GGTGACTCCGTCCTTCCCTCAGCAGCCGCGGCGCGC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCGCGCCGCGGCTGCTaGGGGAAGGACGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEARRGC*GKDGVT
Trigger: GGTGACTCCGTCCTTCCCTCAGCAGCCGCGGCGCGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGCAGCCCCTCGACGCTaGGCAGCTCCGAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKAAPRR*AAPRSG
Trigger: ACCACTTCTCGGAGCTGCGCAGCGTCGAGGGGCTGC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCAGCACAGAGCCCTCCTaGAGCCCCTCGACGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSTEPS*SPSTLR
Trigger: GCGCAGCGTCGAGGGGCTGCAGGAGGGCTCTGTGCT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGCTCAGGCAGGTTCTTaGGAGGCAGCTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRAQAGS*EAAPSS
Trigger: CGACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGCGCCCCTGGTGGCTaGCGCGGTGAAGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRGAPGG*RGEVAV
Trigger: CACAGCGACTTCACCGCGGCAGCCACCAGGGGCGCC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGAAGAGGAGGTACCTGTaGTCCACGAAGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLKRRYL*STKAST
Trigger: GGTGGACGCCTTCGTGGAGCACAGGTACCTCCTCTT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGTCTGTGCCGTCGTCTaGGGCGATGGTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASVCAVV*GDGLCQ
Trigger: CTGGCAGAGACCATCGCCGCAGACGACGGCACAGAC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435359.5
ENST00000570628.6
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGGCTCCGAGGGTCTGTaGCGTCGTCTGCGGCGATGG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPGSEGL*RRLRRW
Trigger: CCATCGCCGCAGACGACGGCACAGACCCTCGGAGCC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435359.5
ENST00000570628.6
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCTGGCGCATCACCTCTaGCAGCGTTGCCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCLAHHL*QRCPVH
Trigger: GTGGACGGGGCAACGCTGGCAGAGGTGATGCGCCAG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGACCGGAACTCAGCTTTaGTCTCGTAGACTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTTGTQL*SRRLGR
Trigger: TCGCCCGAGTCTACGAGAGCAAAGCTGAGTTCCGGT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCTGAGAAATCCCGTCTaGGCGTCACCCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLLRNPV*ASPTQE
Trigger: CTCCTGAGTGGGTGACGCGCAGACGGGATTTCTCAG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGCTCAGCGGTGGGGATaGTCTGCTTGCCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKAQRWG*SACPLT
Trigger: CGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCGGACATGGCGCACGTaGATGCGGGCCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPRTWRT*MRASRT
Trigger: GGTGCGTGAGGCCCGCATCCACGTGCGCCATGTCCG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAGCAGGTCTCGGACATaGCGCACGTGGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSRSRT*RTWMRA
Trigger: GGCCCGCATCCACGTGCGCCATGTCCGAGACCTGCT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGATCCTCTCGAACGGGTaGCGCTGGACCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTILSNG*RWTLFF
Trigger: GAAGAAAAGGGTCCAGCGCCACCCGTTCGAGAGGAT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCATTCAGGTCGTTGGTaGGCGCCACGTAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRHSGRW*APRRPP
Trigger: TGGCGGCCTACGTGGCGCCCACCAACGACCTGAATG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCAGAGCTTGTGCCGGTaGGCGCGGGGGAAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVQSLCR*ARGKPA
Trigger: CGCCGGCTTCCCCCGCGCCCACCGGCACAAGCTCTG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAGAGCTTGTGCCGGTaGGCGCGGGGGAAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGQSLCR*ARGKPA
Trigger: CGCCGGCTTCCCCCGCGCCCACCGGCACAAGCTCTG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGAAGCAGTTCAGGAAGTaGCTGATGGCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTKQFRK*LMAAER
Trigger: CCTCTCAGCCGCCATCAGCCACTTCCTGAACTGCTT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCTTATTCCGCTTCTTaGAGACCAGCTCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSYSAS*RPARRR
Trigger: CCGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTTCTTCCAGAGCTCCTaGGGGGTCATGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLFFQSS*GVMTAQ
Trigger: CTGGGCTGTCATGACCCCCCAGGAGCTCTGGAAGAA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGAACGCGGGCTTGTaGCGACTGTCGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLVNAGL*RLSKLY
Trigger: GTACAGCTTCGACAGTCGCCACAAGCCCGCGTTCAC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGCGCCATCTCGGGGTaGTCTTCCCCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSAISG*SSPNTS
Trigger: GCTGGTGTTCGGGGAAGACCACCCCGAGATGGCGCT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGCGCCATCTCGGGGTaGTCTTCCCCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSAISG*SSPNTS
Trigger: GCTGGTGTTCGGGGAAGACCACCCCGAGATGGCGCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGGGCGACAAGGTGGTaGCTGAGGGCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRATRW*LRATLR
Trigger: CCTCAAGGTGGCCCTCAGCCACCACCTTGTCGCCCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGCTGCGTCTTGTAGATaGTGTAACCCTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNAASCR*CNPPSR
Trigger: ACGAGAAGGAGGGTTACACCATCTACAAGACGCAGC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCCTGGGGCCCCCGCTaGCGCGGGCTCGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESWGPR*RGLGSH
Trigger: ATGGCTACCGAGCCCGCGCCAGCGGGGGCCCCAGGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTCGGAGAAGGGTCCTTaGCAGCCGGGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSEKGP*QPGAGS
Trigger: GCTCCCAGCCCCCGGCTGCCAAGGACCCTTCTCCGA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGCAGCACGGGCAGGGTaGAGCGGGAGCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRAARAG*SGSSVW
Trigger: CCACACGCTGCTCCCGCTCCACCCTGCCCGTGCTGC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTGGCGGGCTTGGGGTTaGAGTGATAAGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLWRAWG*SDKLWT
Trigger: AGTCCACAGCTTATCACTTCAACCCCAAGCCCGCCA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGAGTCGCTGTGCACCTTaGATATGGCCCTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSRCAP*IWPFLG
Trigger: TCCGAGAAAGGGCCATATTCAAGGTGCACAGCGACT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCTCCTCGCTGGGGTTaGTGGCCATCACGTTGCCGT +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSPRWG*WPSRCR
Trigger: ACGGCAACGTGATGGCCATCAACCCCAGCGAGGAGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCGTCGAAGCCCAGGCTaGAGAAGATGTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTRRSPG*RRCCSR
Trigger: TCTGGAACAACATCTTCTTCAGCCTGGGCTTCGACG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCAGGTACCGCGGGTGTaGCACCACGGTCTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKQVPRV*HHGLAE
Trigger: TTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGTGCCGCAGGATCTTaGGGGGCCGACTCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRGAAGS*GADSCA
Trigger: AGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGCCCGTCGTTGCCAATaGTGCCCTTGCACTCGACCG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKARRCQ*CPCTRP
Trigger: CGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCCAGGTAGCGCATGTTaGTGCCCCGCTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCPGSAC*CPAGAS
Trigger: TGATGCGCCAGCGGGGCATCAACATGCGCTACCTGG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGTGGCTGATGGCGGCTaGGAGGCCGGAGAGCTCGAC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRVADGG*EAGELD
Trigger: GTCGAGCTCTCCGGCCTCTCAGCCGCCATCAGCCAC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGAGTTCAGGAAGTGGCTaGTGGCGGCTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSSGSG*WRLRGR
Trigger: CCGGCCTCTCAGCCGCCATCAGCCACTTCCTGAACT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGCACGTCCTCCTCGGTaGACGCGGGCTTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRARPPR*TRACGD
Trigger: GTCGCCACAAGCCCGCGTTCACCGAGGAGGACGTGC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGAACACCAGCAGCATaGGGTAGCGGGCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRTPAA*GSGRGT
Trigger: TGTACCGCGCCCGCTACCTCATGCTGCTGGTGTTCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCGAACACCAGCAGCATaGGGTAGCGGGCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKRTPAA*GSGRGT
Trigger: TGTACCGCGCCCGCTACCTCATGCTGCTGGTGTTCG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCCCCCAGCCGGGAACTaGTGGCCGCACACGCCATTC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRPPAGN*WPHTPF
Trigger: GAATGGCGTGTGCGGCCATCAGTTCCCGGCTGGGGG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACGCCCATCCCCCTTaGAACAAGGTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASHAHPP*NKVSGR
Trigger: CCGTCCAGACACCTTGTTTCAAGGGGGATGGGCGTG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCCCCGTTTAAGAGCATaGCTGATGGCAGCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTPRLRA*LMAASD
Trigger: GTCAGAAGCTGCCATCAGTCATGCTCTTAAACGGGG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570628.6
CDS-3UTR GCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGGACCCTTTTCTTCTaGAGCACAGCGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNWTLFF*STAKFF
Trigger: GAAGAACTTCGCTGTGCTGCAGAAGAAAAGGGTCCA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGGTGTAGGCGTCCTCTaGACGCACGCAATCCATGGC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRGVGVL*THAIHG
Trigger: GCCATGGATTGCGTGCGTGCAGAGGACGCCTACACC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGAGCTCCCTCGTCGTCTaGAGCTCCTCATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSSLVV*SSSFQS
Trigger: AGACTGGAATGAGGAGCTGCAGACGACGAGGGAGCT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGCTCAGGCAGGTTCTTaGGAGGCAGCTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCAQAGS*EAAPSS
Trigger: CGACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGGCGCCCCTGGTGGCTaGCGCGGTGAAGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGGAPGG*RGEVAV
Trigger: CACAGCGACTTCACCGCGGCAGCCACCAGGGGCGCC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAATCCACCACCACCGTaGCCAGCGTGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASNPPPP*PACTAP
Trigger: AGGGGCTGTACACGCTGGGCACGGTGGTGGTGGATT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSLSTW*RRILRG
Trigger: GCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGCTGGCTGGCGTTCTaGTGCATCAGCTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSWLAF*CISCKA
Trigger: CGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGCTGGCTGGCGTTCTaGTGCATCAGCTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSWLAF*CISCKA
Trigger: CGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTGGAGCCGACCGCCTTaGACGCGTTGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCWSRPP*TRCGSP
Trigger: AGGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGGAGCCGACCGCCTTaGACGCGTTGCGGATCACCT +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKWSRPP*TRCGSP
Trigger: AGGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGCGTCCTTCAGCAGCTaGTTCTGGTCCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLASFSS*FWSRTS
Trigger: TGAAGTTCGGGACCAGAAGCAGCTGCTGAAGGACGC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCTGRTA*SMQSFT
Trigger: GGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTGCTGCACTTTGGCCTaGCCGCTCTGGAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLCCTLA*PLWKKW
Trigger: CCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCCTTCAGGAAGCCCTaGTGCACTTTGGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSFRKP*CTLACP
Trigger: CGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAAGGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCTCCCTCTCTATCCCTaGACGCTCGGAGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRLPLYP*TLGEGS
Trigger: GGACCCTTCTCCGAGCGTGCAGGGATAGAGAGGGAG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGCAAAAACACCTTCTaGGGGGCAGGCAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRKNTF*GAGRPG
Trigger: GCCTGGCCTGCCTGCCCCGCAGAAGGTGTTTTTGCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTGTGCCGTCGTCTaGGGCGATGGTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKCCAVV*GDGLCQ
Trigger: CTGGCAGAGACCATCGCCGCAGACGACGGCACAGCA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCTCCCTGCTGCTCGCTaGCCGTCGGGCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGLPAAR*PSGGHC
Trigger: ACAGTGCCCGCCCGACGGGCAGCGAGCAGCAGGGAG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570628.6
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCTCGGGGAGACTCCCTaGTGCTCGCTGCCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVLGETP*CSLPVG
Trigger: CCCGACGGGCAGCGAGCAGCAGGGAGTCTCCCCGAG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570628.6
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCCCATTTTCCCTGGGTaGCTCGGCCGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGPIFPG*LGRRRL
Trigger: GAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCCATTTTCCCTGGGTaGCTCGGCCGCCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPIFPG*LGRRRL
Trigger: GAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCATTCAGGTCGTTGGTaGGCGCCACGTAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCHSGRW*APRRPP
Trigger: TGGCGGCCTACGTGGCGCCCACCAACGACCTGAATG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCGGTCGTTGAGCACCTaGTGCCGCAGGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRSLST*CRRILR
Trigger: CCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACAGAGCTTGTGCCGGTaGGCGCGGGGGAAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPQSLCR*ARGKPA
Trigger: CGCCGGCTTCCCCCGCGCCCACCGGCACAAGCTCTG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCCTTGGCCAGGCCGCTaGCGCTGCTACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRPWPGR*RCYPPP
Trigger: AGGAGGAGGGTAGCAGCGCCAGCGGCCTGGCCAAGG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGCGTCGTCTGCGGCGATaGTCTCTGCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRRLRR*SLPAPS
Trigger: TGAAGGAGCTGGCAGAGACCATCGCCGCAGACGACG...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCCCGAACTTCATCCTaGCAGGACTCAGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSRTSS*QDSGKR
Trigger: TCGTTTCCCTGAGTCCTGCCAGGATGAAGTTCGGGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAAGACGTGGTCCAGCTaGTGGCGGGCCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGKTWSS*WRAGLR
Trigger: GCGGAGCCCGGCCCGCCACCAGCTGGACCACGTCTT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCCTTCAGCAGGACCTaGATCCCTGTTTTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSFSRT*IPVFSE
Trigger: CTCGCTGAAAACAGGGATCCAGGTCCTGCTGAAGGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGCCCTGCTGCACTTTaGCCTGCCCGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSPAAL*PARSGR
Trigger: TCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGCCCTGCTGCACTTTaGCCTGCCCGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSPAAL*PARSGR
Trigger: TCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCACTCGGGCGACAAGGTaGTGGCTGAGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCTRATR*WLRATL
Trigger: CAAGGTGGCCCTCAGCCACCACCTTGTCGCCCGAGT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGACTCGGGCGACAAGGTaGTGGCTGAGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKTRATR*WLRATL
Trigger: CAAGGTGGCCCTCAGCCACCACCTTGTCGCCCGAGT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATCCTGGGGCCCCCGCTaGCGCGGGCTCGGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSWGPR*RGLGSH
Trigger: ATGGCTACCGAGCCCGCGCCAGCGGGGGCCCCAGGA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCGGAGAAGGGTCCTTaGCAGCCGGGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSEKGP*QPGAGS
Trigger: GCTCCCAGCCCCCGGCTGCCAAGGACCCTTCTCCGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGACGGGGCCGCTGGCTaGCTGTCCGTCTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGDGAAG*LSVWLP
Trigger: AGGGAGCCAGACGGACAGCCAGCCAGCGGCCCCGTC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGACACGGGGGTGGGGTaGGGTGAGACGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPDTGVG*GETWRK
Trigger: CTTCCTCCACGTCTCACCCCACCCCACCCCCGTGTC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGTCAGAGCCACCCACTaGGCTCTGAGGGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCVRATH*ALRAQQ
Trigger: TTGCTGGGCCCTCAGAGCCCAGTGGGTGGCTCTGAC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGTCAGAGCCACCCACTaGGCTCTGAGGGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKVRATH*ALRAQQ
Trigger: TTGCTGGGCCCTCAGAGCCCAGTGGGTGGCTCTGAC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGCAGCACGGGCAGGGTaGAGCGGGAGCAGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGAARAG*SGSSVW
Trigger: CCACACGCTGCTCCCGCTCCACCCTGCCCGTGCTGC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGTTCTTGCTCAGCGGTaGGGATGCTCTGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRVLAQR*GCSACP
Trigger: CGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAAC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTGCAGTCAACCCCGTTaGAGGCATCGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRCSQPR*RHRMGP
Trigger: TGGACCCATCCGATGCCTTCAACGGGGTTGACTGCA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTGCAGTCAACCCCGTTaGAGGCATCGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASCSQPR*RHRMGP
Trigger: TGGACCCATCCGATGCCTTCAACGGGGTTGACTGCA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCCAGGTCGCCGTCGGTaGAGACACTCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKPGRRR*RHSGRT
Trigger: TGTCCTTCCTGAGTGTCTTCACCGACGGCGACCTGG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCACGTTGCCGTCAATaGCGGCCATGGCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSRCRQ*RPWRPW
Trigger: CCAGGGGCGCCATGGCCGTCATTGACGGCAACGTGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCCTCGTCACGGTCGTTaGGCACCTGGTGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRPRHGR*APGAAG
Trigger: TCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCGAAGGCGGTGCTGCTaGTGGAGCCGACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGERRRCC*WSRPPC
Trigger: GCAAGGCGGTCGGCTCCATCAGCAGCACCGCCTTCG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCGAAGGCGGTGCTGCTaGTGGAGCCGACCGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGRRRCC*WSRPPC
Trigger: GCAAGGCGGTCGGCTCCATCAGCAGCACCGCCTTCG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCACGTCCTCCTCGGTaGACGCGGGCTTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEARPPR*TRACGD
Trigger: GTCGCCACAAGCCCGCGTTCACCGAGGAGGACGTGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGCACGTCCTCCTCGGTaGACGCGGGCTTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGARPPR*TRACGD
Trigger: GTCGCCACAAGCCCGCGTTCACCGAGGAGGACGTGC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTTTCGGCCTAAACCCTaGACTTTCAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLFRPKP*TFRQAG
Trigger: CCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCACGCCCATCCCCCTTaGAACAAGGTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKHAHPP*NKVSGR
Trigger: CCGTCCAGACACCTTGTTTCAAGGGGGATGGGCGTG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCATGGCGCACGTGGATaGGGGCCTCACGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRHGARG*GPHAPC
Trigger: ACACGGTGCGTGAGGCCCGCATCCACGTGCGCCATG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTACATGAGGTCCCCGTaGATCTTCCGGTTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKYMRSP*IFRFPG
Trigger: CCCGGGGAACCGGAAGATGCACGGGGACCTCATGTA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTACATGAGGTCCCCGTaGATCTTCCGGTTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCYMRSP*IFRFPG
Trigger: CCCGGGGAACCGGAAGATGCACGGGGACCTCATGTA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGGTGTAGGCGTCCTCTaGACGCACGCAATCCATGGC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKGVGVL*THAIHG
Trigger: GCCATGGATTGCGTGCGTGCAGAGGACGCCTACACC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGGCGCCCCTGGTGGCTaGCGCGGTGAAGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPGAPGG*RGEVAV
Trigger: CACAGCGACTTCACCGCGGCAGCCACCAGGGGCGCC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSLSTW*RRILRG
Trigger: GCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAAGAGGAGGTACCTGTaGTCCACGAAGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASKRRYL*STKAST
Trigger: GGTGGACGCCTTCGTGGAGCACAGGTACCTCCTCTT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTTCTGCTGCATCAGCTaGAAGGCGGCCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLFCCIS*KAASFI
Trigger: TATGAAGCTGGCCGCCTTGCAGCTGATGCAGCAGAA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAGCTGGCTGGCGTTCTaGTGCATCAGCTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSWLAF*CISCKA
Trigger: CGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCGCCTTGCACGCGTTaGGGATCACCTCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPPCTR*GSPPGS
Trigger: GGAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGCCTTGGGGTTGACGTaGTTGACCACGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRALGLT*LTTGKM
Trigger: CATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTTCAGGAAGCCCTGCTaGACTTTGGCCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKFRKPC*TLACPL
Trigger: GAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTTCAGGAAGCCCTGCTaGACTTTGGCCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCFRKPC*TLACPL
Trigger: GAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTCCTTCAGGAAGCCCTaGTGCACTTTGGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSFRKP*CTLACP
Trigger: CGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAAGGA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGCAGTACAGGGCCAGGTaGATGTATTCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLQYRAR*MYSWMV
Trigger: CACCATCCAGGAATACATGCACCTGGCCCTGTACTG...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCGTTCATGGTGCGCTaGAGGGCCACGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSFMVR*RATACW
Trigger: CCAGCAGGCCGTGGCCCTGCAGCGCACCATGAACGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGCTCAGCGGTGGGGATaGTCTGCTTGCCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRAQRWG*SACPLT
Trigger: CGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCAAGCCCATTTTCCCTaGGTGGCTCGGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEQAHFP*VARPPP
Trigger: CGGCGGCGGCCGAGCCACCCAGGGAAAATGGGCTTG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGCAGCTCCGAGAAGTaGTCCAGCACGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRSSEK*SSTLPS
Trigger: GGATGGCAACGTGCTGGACCACTTCTCGGAGCTGCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCGGACATGGCGCACGTaGATGCGGGCCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGERTWRT*MRASRT
Trigger: GGTGCGTGAGGCCCGCATCCACGTGCGCCATGTCCG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCGAACGGGTGGCGCTaGACCCTTTTCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSNGWR*TLFFCS
Trigger: GCTGCAGAAGAAAAGGGTCCAGCGCCACCCGTTCGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCGGTCGTTGAGCACCTaGTGCCGCAGGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKRSLST*CRRILR
Trigger: CCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCCCGCCTCCTGTCCTaGAGGATCCTCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASSRLLS*RILRLG
Trigger: TCCAAGTCTGAGGATCCTCCAGGACAGGAGGCGGGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCCTTGGCCAGGCCGCTaGCGCTGCTACCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEPWPGR*RCYPPP
Trigger: AGGAGGAGGGTAGCAGCGCCAGCGGCCTGGCCAAGG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGTCGTCTGCGGCGATaGTCTCTGCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRRLRR*SLPAPS
Trigger: TGAAGGAGCTGGCAGAGACCATCGCCGCAGACGACG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTCCCGAACTTCATCCTaGCAGGACTCAGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSRTSS*QDSGKR
Trigger: TCGTTTCCCTGAGTCCTGCCAGGATGAAGTTCGGGA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAAGACGTGGTCCAGCTaGTGGCGGGCCGGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPKTWSS*WRAGLR
Trigger: GCGGAGCCCGGCCCGCCACCAGCTGGACCACGTCTT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKVGHGV*VGAQEA
Trigger: TGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCAC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTTCTTCCAGAGCTCCTaGGGGGTCATGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRFFQSS*GVMTAQ
Trigger: CTGGGCTGTCATGACCCCCCAGGAGCTCTGGAAGAA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACAGTCAAAGTAGTTCTTaGCCTCCTGGCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSQSSS*PPGRCS
Trigger: AGAACATCTGCCAGGAGGCCAAGAACTACTTTGACT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGTGAACGCGGGCTTGTaGCGACTGTCGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASVNAGL*RLSKLY
Trigger: GTACAGCTTCGACAGTCGCCACAAGCCCGCGTTCAC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAGCCCTGCTGCACTTTaGCCTGCCCGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSPAAL*PARSGR
Trigger: TCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCACTCGGGCGACAAGGTaGTGGCTGAGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPTRATR*WLRATL
Trigger: CAAGGTGGCCCTCAGCCACCACCTTGTCGCCCGAGT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTCGGAGAAGGGTCCTTaGCAGCCGGGGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSEKGP*QPGAGS
Trigger: GCTCCCAGCCCCCGGCTGCCAAGGACCCTTCTCCGA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGACACGGGGGTGGGGTaGGGTGAGACGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRDTGVG*GETWRK
Trigger: CTTCCTCCACGTCTCACCCCACCCCACCCCCGTGTC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCCGGGATCCGTAATTaGGCCCCGCTTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPGIRN*APLPPA
Trigger: GGCTGGGGGAAGCGGGGCCCAATTACGGATCCCGGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCCCCGTTTAAGAGCATaGCTGATGGCAGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPPRLRA*LMAARP
Trigger: CGGCCGAGCTGCCATCAGTCATGCTCTTAAACGGGG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000435359.5
ENST00000574426.7
ENST00000651024.2
CDS-3UTR TCA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGAAAAGCCCGTGTCCTaGATGACAATGACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLEKPVS*MTMTSW
Trigger: CCAGGAAGTCATTGTCATTCAGGACACGGGCTTTTC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCACGTTGCCGTCAATaGCGGCCATGGCGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESRCRQ*RPWRPW
Trigger: CCAGGGGCGCCATGGCCGTCATTGACGGCAACGTGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCAGGTACCGCGGGTGTaGCACCACGGTCTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRQVPRV*HHGLAE
Trigger: TTCGGCAAGACCGTGGTGTCACACCCGCGGTACCTG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGGTGCCGCAGGATCTTaGGGGGCCGACTCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPGAAGS*GADSCA
Trigger: AGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCCTCGTCACGGTCGTTaGGCACCTGGTGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGPRHGR*APGAAG
Trigger: TCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCTCGTCACGGTCGTTaGGCACCTGGTGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPRHGR*APGAAG
Trigger: TCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGTGGCTGATGGCGGCTaGGAGGCCGGAGAGCTCGAC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPVADGG*EAGELD
Trigger: GTCGAGCTCTCCGGCCTCTCAGCCGCCATCAGCCAC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGCACGTCCTCCTCGGTaGACGCGGGCTTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPARPPR*TRACGD
Trigger: GTCGCCACAAGCCCGCGTTCACCGAGGAGGACGTGC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCGAACACCAGCAGCATaGGGTAGCGGGCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRRTPAA*GSGRGT
Trigger: TGTACCGCGCCCGCTACCTCATGCTGCTGGTGTTCG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGCAGCCCCTCGACGCTaGGCAGCTCCGAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGAAPRR*AAPRSG
Trigger: ACCACTTCTCGGAGCTGCGCAGCGTCGAGGGGCTGC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTGGACCCTTTTCTTCTaGAGCACAGCGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTWTLFF*STAKFF
Trigger: GAAGAACTTCGCTGTGCTGCAGAAGAAAAGGGTCCA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGCTCCCTCGTCGTCTaGAGCTCCTCATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSSLVV*SSSFQS
Trigger: AGACTGGAATGAGGAGCTGCAGACGACGAGGGAGCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCCACCGCGTTGTACGTaGGGACGCCATTCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPPPRCT*GRHSGR
Trigger: ACGACCTGAATGGCGTCCGCACGTACAACGCGGTGG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGTGACACCACGGTCTTaGCGAAGTCGATGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKVTPRS*RSRWSR
Trigger: ACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCAC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCAGCTGGCTGGCGTTCTaGTGCATCAGCTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSWLAF*CISCKA
Trigger: CGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCCAGGCCGCTGGCGCTaGTACCCTCCTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEPGRWR*YPPPHF
Trigger: GAAGTGAGGAGGAGGGTAGCAGCGCCAGCGGCCTGG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCCAGGCCGCTGGCGCTaGTACCCTCCTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGPGRWR*YPPPHF
Trigger: GAAGTGAGGAGGAGGGTAGCAGCGCCAGCGGCCTGG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGCGTCCTTCAGCAGCTaGTTCTGGTCCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASASFSS*FWSRTS
Trigger: TGAAGTTCGGGACCAGAAGCAGCTGCTGAAGGACGC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRTGRTA*SMQSFT
Trigger: GGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCTGGCGCATCACCTCTaGCAGCGTTGCCCCGTCCAC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGLAHHL*QRCPVH
Trigger: GTGGACGGGGCAACGCTGGCAGAGGTGATGCGCCAG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCAGGCTGTGTTATCTaGAGCCCCCGGGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPGCVI*SPRGPV
Trigger: AACCGGCCCCCGGGGGCTGCAGATAACACAGCCTGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCCAGGCTGTGTTATCTaGAGCCCCCGGGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGPGCVI*SPRGPV
Trigger: AACCGGCCCCCGGGGGCTGCAGATAACACAGCCTGG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGCCTTGGGGTTGACGTaGTTGACCACGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCALGLT*LTTGKM
Trigger: CATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTTCAGGAAGCCCTGCTaGACTTTGGCCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPFRKPC*TLACPL
Trigger: GAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCGTTCATGGTGCGCTaGAGGGCCACGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESFMVR*RATACW
Trigger: CCAGCAGGCCGTGGCCCTGCAGCGCACCATGAACGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGCTGAGAAATCCCGTCTaGGCGTCACCCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKLRNPV*ASPTQE
Trigger: CTCCTGAGTGGGTGACGCGCAGACGGGATTTCTCAG...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTGGGGATGCTCTGCTTaGCCGCTCACGCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGWGCSA*PLTPIP
Trigger: GGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCGGTGGGGATGCTCTaGTTGCCCGCTCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEAVGML*LPAHAH
Trigger: ATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGCGGTGGGGATGCTCTaGTTGCCCGCTCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVAVGML*LPAHAH
Trigger: ATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCGAACGGGTGGCGCTaGACCCTTTTCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSNGWR*TLFFCS
Trigger: GCTGCAGAAGAAAAGGGTCCAGCGCCACCCGTTCGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGATCCTCTCGAACGGGTaGCGCTGGACCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRILSNG*RWTLFF
Trigger: GAAGAAAAGGGTCCAGCGCCACCCGTTCGAGAGGAT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTATCCTCTCGAACGGGTaGCGCTGGACCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASILSNG*RWTLFF
Trigger: GAAGAAAAGGGTCCAGCGCCACCCGTTCGAGAGGAT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGTCCAGCTGTACACCTaGAATGGGGTGGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCVQLYT*NGVAIL
Trigger: GAGGATCGCCACCCCATTCCAGGTGTACAGCTGGAC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCGCCATTCAGGTCGTTaGTGGGCGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGRHSGR*WAPRRP
Trigger: CGGCCTACGTGGCGCCCACCAACGACCTGAATGGCG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCGGTCGTTGAGCACCTaGTGCCGCAGGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPRSLST*CRRILR
Trigger: CCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCCCGCCTCCTGTCCTaGAGGATCCTCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSRLLS*RILRLG
Trigger: TCCAAGTCTGAGGATCCTCCAGGACAGGAGGCGGGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCATGTTGATGCCCCGCTaGCGCATCACCTCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPMLMPR*RITSAS
Trigger: GCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACAT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCCGATTTTAAAGACGTaGTCCAGCTGGTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCPILKT*SSWWRA
Trigger: GGCCCGCCACCAGCTGGACCACGTCTTTAAAATCGG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPVGHGV*VGAQEA
Trigger: TGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCAC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGTGAACGCGGGCTTGTaGCGACTGTCGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCVNAGL*RLSKLY
Trigger: GTACAGCTTCGACAGTCGCCACAAGCCCGCGTTCAC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCGGGCGACAAGGTGGTaGCTGAGGGCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRATRW*LRATLR
Trigger: CCTCAAGGTGGCCCTCAGCCACCACCTTGTCGCCCG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGACTCGGGCGACAAGGTaGTGGCTGAGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRTRATR*WLRATL
Trigger: CAAGGTGGCCCTCAGCCACCACCTTGTCGCCCGAGT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGACACGGGGGTGGGGTaGGGTGAGACGTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVDTGVG*GETWRK
Trigger: CTTCCTCCACGTCTCACCCCACCCCACCCCCGTGTC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSPTQD*LGLCTG
Trigger: CCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGACCAGGAAGGGAGCTaGGCACCAGAGAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCDQEGS*APEKRH
Trigger: ATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGTTCTTGCTCAGCGGTaGGGATGCTCTGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPVLAQR*GCSACP
Trigger: CGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAAC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCCCGTCGTTGCCAATaGTGCCCTTGCACTCGACCG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEARRCQ*CPCTRP
Trigger: CGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCCAGGTAGCGCATGTTaGTGCCCCGCTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGPGSAC*CPAGAS
Trigger: TGATGCGCCAGCGGGGCATCAACATGCGCTACCTGG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCCTGTAAGTACGTCTTaGAGATGTGCTTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASPVSTS*RCAWPS
Trigger: GCTCGGCCAAGCACATCTTCAAGACGTACTTACAGG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAGTTCAGGAAGTGGCTaGTGGCGGCTGAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESSGSG*WRLRGR
Trigger: CCGGCCTCTCAGCCGCCATCAGCCACTTCCTGAACT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCGAACACCAGCAGCATaGGGTAGCGGGCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRTPAA*GSGRGT
Trigger: TGTACCGCGCCCGCTACCTCATGCTGCTGGTGTTCG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCGAACACCAGCAGCATaGGGTAGCGGGCGCGGTACA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGRTPAA*GSGRGT
Trigger: TGTACCGCGCCCGCTACCTCATGCTGCTGGTGTTCG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTACATGAGGTCCCCGTaGATCTTCCGGTTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRYMRSP*IFRFPG
Trigger: CCCGGGGAACCGGAAGATGCACGGGGACCTCATGTA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGTGTAGGCGTCCTCTaGACGCACGCAATCCATGGC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRGVGVL*THAIHG
Trigger: GCCATGGATTGCGTGCGTGCAGAGGACGCCTACACC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAGCTCCCTCGTCGTCTaGAGCTCCTCATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSSLVV*SSSFQS
Trigger: AGACTGGAATGAGGAGCTGCAGACGACGAGGGAGCT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCTCAGGCAGGTTCTTaGGAGGCAGCTCCCTCGTCG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEAQAGS*EAAPSS
Trigger: CGACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSLSTW*RRILRG
Trigger: GCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTTCTGCTGCATCAGCTaGAAGGCGGCCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRFCCIS*KAASFI
Trigger: TATGAAGCTGGCCGCCTTGCAGCTGATGCAGCAGAA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGGCTGGCGTTCTGCTaGATCAGCTGCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVWLAFC*ISCKAA
Trigger: GGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGGCTGGCGTTCTGCTaGATCAGCTGCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEWLAFC*ISCKAA
Trigger: GGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTGGCTGGCGTTCTGCTaGATCAGCTGCAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGWLAFC*ISCKAA
Trigger: GGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGAGCTGGCTGGCGTTCTaGTGCATCAGCTGCAAGGCG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSWLAF*CISCKA
Trigger: CGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACCAGGCCGCTGGCGCTaGTACCCTCCTCCTCACTTC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPPGRWR*YPPPHF
Trigger: GAAGTGAGGAGGAGGGTAGCAGCGCCAGCGGCCTGG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTCTGTGCCGTCGTCTaGGGCGATGGTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVCAVV*GDGLCQ
Trigger: CTGGCAGAGACCATCGCCGCAGACGACGGCACAGAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000435359.5
ENST00000570628.6
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGACCGCGTGCTCCATaGAGTCCTTCACCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRGPRAP*SPSPSQ
Trigger: CTGGCTTGGTGAAGGACTGCATGGAGCACGCGGTCC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTACGTCTTGAAGATGTaGTTGGCCGAGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASYVLKM*LAERVM
Trigger: CATCACCCGCTCGGCCAAGCACATCTTCAAGACGTA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGTTACTCAGGGCCTCTaGGTAGTCGCCCATGATGTA +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASVTQGL*VVAHDV
Trigger: TACATCATGGGCGACTACGCAGAGGCCCTGAGTAAC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGTTACTCAGGGCCTCTaGGTAGTCGCCCATGATGTA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRVTQGL*VVAHDV
Trigger: TACATCATGGGCGACTACGCAGAGGCCCTGAGTAAC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCAGTACAGGGCCAGGTaGATGTATTCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASQYRAR*MYSWMV
Trigger: CACCATCCAGGAATACATGCACCTGGCCCTGTACTG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGACCGGAACTCAGCTTTaGTCTCGTAGACTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKTGTQL*SRRLGR
Trigger: TCGCCCGAGTCTACGAGAGCAAAGCTGAGTTCCGGT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCACCGGAACTCAGCTTTaGTCTCGTAGACTCGGGCGA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCTGTQL*SRRLGR
Trigger: TCGCCCGAGTCTACGAGAGCAAAGCTGAGTTCCGGT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATCGTTCATGGTGCGCTaGAGGGCCACGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSFMVR*RATACW
Trigger: CCAGCAGGCCGTGGCCCTGCAGCGCACCATGAACGA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATGGGGATGCTCTGCTTaGCCGCTCACGCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPWGCSA*PLTPIP
Trigger: GGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGCGGTGGGGATGCTCTaGTTGCCCGCTCACGCCCAT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPAVGML*LPAHAH
Trigger: ATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGCTCAGCGGTGGGGATaGTCTGCTTGCCCGCTCACG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPAQRWG*SACPLT
Trigger: CGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGCTGTGCCGTCGTCTaGGGCGATGGTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVCCAVV*GDGLCQ
Trigger: CTGGCAGAGACCATCGCCGCAGACGACGGCACAGCA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGCTGTGCCGTCGTCTaGGGCGATGGTCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGECCAVV*GDGLCQ
Trigger: CTGGCAGAGACCATCGCCGCAGACGACGGCACAGCA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCGCAGCTCCGAGAAGTaGTCCAGCACGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRRSSEK*SSTLPS
Trigger: GGATGGCAACGTGCTGGACCACTTCTCGGAGCTGCG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAGCAGGTCTCGGACATaGCGCACGTGGATGCGGGCC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSRSRT*RTWMRA
Trigger: GGCCCGCATCCACGTGCGCCATGTCCGAGACCTGCT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCATTCAGGTCGTTGGTaGGCGCCACGTAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEHSGRW*APRRPP
Trigger: TGGCGGCCTACGTGGCGCCCACCAACGACCTGAATG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCATTCAGGTCGTTGGTaGGCGCCACGTAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVHSGRW*APRRPP
Trigger: TGGCGGCCTACGTGGCGCCCACCAACGACCTGAATG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACGCCATTCAGGTCGTTaGTGGGCGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRHSGR*WAPRRP
Trigger: CGGCCTACGTGGCGCCCACCAACGACCTGAATGGCG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCTTATTCCGCTTCTTaGAGACCAGCTCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSYSAS*RPARRR
Trigger: CCGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAGCGCCATCTCGGGGTaGTCTTCCCCGAACACCAGC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSAISG*SSPNTS
Trigger: GCTGGTGTTCGGGGAAGACCACCCCGAGATGGCGCT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACGGGCGACAAGGTGGTaGCTGAGGGCCACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRATRW*LRATLR
Trigger: CCTCAAGGTGGCCCTCAGCCACCACCTTGTCGCCCG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTACTCGGGCGACAAGGTaGTGGCTGAGGGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGTRATR*WLRATL
Trigger: CAAGGTGGCCCTCAGCCACCACCTTGTCGCCCGAGT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAGGAGGACACGGGGGTaGGGTGGGGTGAGACGTGGA +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRRTRG*GGVRRG
Trigger: TCCACGTCTCACCCCACCCCACCCCCGTGTCCTCCT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSPTQD*LGLCTG
Trigger: CCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGTCAGAGCCACCCACTaGGCTCTGAGGGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGVRATH*ALRAQQ
Trigger: TTGCTGGGCCCTCAGAGCCCAGTGGGTGGCTCTGAC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTCAGAGCCACCCACTaGGCTCTGAGGGCCCAGCAA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVRATH*ALRAQQ
Trigger: TTGCTGGGCCCTCAGAGCCCAGTGGGTGGCTCTGAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTGCAGTCAACCCCGTTaGAGGCATCGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRCSQPR*RHRMGP
Trigger: TGGACCCATCCGATGCCTTCAACGGGGTTGACTGCA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCCAGGTCGCCGTCGGTaGAGACACTCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGPGRRR*RHSGRT
Trigger: TGTCCTTCCTGAGTGTCTTCACCGACGGCGACCTGG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCAGGTCGCCGTCGGTaGAGACACTCAGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPGRRR*RHSGRT
Trigger: TGTCCTTCCTGAGTGTCTTCACCGACGGCGACCTGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGTCGAAGCCCAGGCTaGAGAAGATGTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRRSPG*RRCCSR
Trigger: TCTGGAACAACATCTTCTTCAGCCTGGGCTTCGACG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGCCCGTCGTTGCCAATaGTGCCCTTGCACTCGACCG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPARRCQ*CPCTRP
Trigger: CGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAGAAGATGTCAGGATTaGAGCGAATGTCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASRRCQD*SECRRR
Trigger: CCGCCTTCGACATTCGCTTCAATCCTGACATCTTCT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAGAAGATGTCAGGATTaGAGCGAATGTCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRRRCQD*SECRRR
Trigger: CCGCCTTCGACATTCGCTTCAATCCTGACATCTTCT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTTTCGGCCTAAACCCTaGACTTTCAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKFRPKP*TFRQAG
Trigger: CCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCACGCCCATCCCCCTTaGAACAAGGTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEHAHPP*NKVSGR
Trigger: CCGTCCAGACACCTTGTTTCAAGGGGGATGGGCGTG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCACGCCCATCCCCCTTaGAACAAGGTGTCTGGACGG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVHAHPP*NKVSGR
Trigger: CCGTCCAGACACCTTGTTTCAAGGGGGATGGGCGTG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTACTGATGGCAGCTTCTaGCTCAAGGCCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGTDGSF*LKAQGG
Trigger: GCCTCCCTGGGCCTTGAGTCAGAAGCTGCCATCAGT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570628.6
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCGGTGATGCTGACTTaGCGGTCCTCGGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEAVMLT*RSSAVI
Trigger: GATCACAGCCGAGGACCGGCAAGTCAGCATCACCGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGCGGTGATGCTGACTTaGCGGTCCTCGGCTGTGATC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVAVMLT*RSSAVI
Trigger: GATCACAGCCGAGGACCGGCAAGTCAGCATCACCGC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCACCGCGTTGTACGTaGGGACGCCATTCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPPRCT*GRHSGR
Trigger: ACGACCTGAATGGCGTCCGCACGTACAACGCGGTGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGAATCCACCACCACCGTaGCCAGCGTGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVNPPPP*PACTAP
Trigger: AGGGGCTGTACACGCTGGGCACGGTGGTGGTGGATT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAATCCACCACCACCGTaGCCAGCGTGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGNPPPP*PACTAP
Trigger: AGGGGCTGTACACGCTGGGCACGGTGGTGGTGGATT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAATCCACCACCACCGTaGCCAGCGTGTACAGCCCCT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGENPPPP*PACTAP
Trigger: AGGGGCTGTACACGCTGGGCACGGTGGTGGTGGATT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGTGACACCACGGTCTTaGCGAAGTCGATGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRVTPRS*RSRWSR
Trigger: ACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCAC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESLSTW*RRILRG
Trigger: GCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTTCTGCTGCATCAGCTaGAAGGCGGCCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCFCCIS*KAASFI
Trigger: TATGAAGCTGGCCGCCTTGCAGCTGATGCAGCAGAA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGCGTCCTTCAGCAGCTaGTTCTGGTCCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPASFSS*FWSRTS
Trigger: TGAAGTTCGGGACCAGAAGCAGCTGCTGAAGGACGC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGGACCGCGTGCTCCATaGAGTCCTTCACCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGGPRAP*SPSPSQ
Trigger: CTGGCTTGGTGAAGGACTGCATGGAGCACGCGGTCC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPTGRTA*SMQSFT
Trigger: GGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTACGTCTTGAAGATGTaGTTGGCCGAGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCYVLKM*LAERVM
Trigger: CATCACCCGCTCGGCCAAGCACATCTTCAAGACGTA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTGCTGCACTTTGGCCTaGCCGCTCTGGAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPCCTLA*PLWKKW
Trigger: CCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTTCAGGAAGCCCTGCTaGACTTTGGCCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVFRKPC*TLACPL
Trigger: GAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTTCAGGAAGCCCTGCTaGACTTTGGCCTGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEFRKPC*TLACPL
Trigger: GAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCTCCCTCTCTATCCCTaGACGCTCGGAGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVLPLYP*TLGEGS
Trigger: GGACCCTTCTCCGAGCGTGCAGGGATAGAGAGGGAG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCTCCCTCTCTATCCCTaGACGCTCGGAGAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGLPLYP*TLGEGS
Trigger: GGACCCTTCTCCGAGCGTGCAGGGATAGAGAGGGAG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACGCCCCAAACTAAAGTaGACCCCAGCCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRPKLK*TPALQP
Trigger: GGGCTGGAGGGCTGGGGTGCACTTTAGTTTGGGGCG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGATGACAATGACTTCCTaGCCGGTGGTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKMTMTS*PVVSSP
Trigger: GGGAGATGAGACCACCGGCCAGGAAGTCATTGTCAT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCGCAGCTCCGAGAAGTaGTCCAGCACGTTGCCATCC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGERSSEK*SSTLPS
Trigger: GGATGGCAACGTGCTGGACCACTTCTCGGAGCTGCG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCCCGAACTTCATCCTaGCAGGACTCAGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSRTSS*QDSGKR
Trigger: TCGTTTCCCTGAGTCCTGCCAGGATGAAGTTCGGGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGVGHGV*VGAQEA
Trigger: TGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCAC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVGHGV*VGAQEA
Trigger: TGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTTCTTCCAGAGCTCCTaGGGGGTCATGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRFFQSS*GVMTAQ
Trigger: CTGGGCTGTCATGACCCCCCAGGAGCTCTGGAAGAA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCCTTCAGCAGGACCTaGATCCCTGTTTTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSFSRT*IPVFSE
Trigger: CTCGCTGAAAACAGGGATCCAGGTCCTGCTGAAGGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCACTCGGAGCTTTCCTTaGTCTTCTCATGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCTRSFP*SSHGPR
Trigger: GCGAGGACCATGAGAAGACCAAGGAAAGCTCCGAGT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGTTCTTGCTCAGCGGTaGGGATGCTCTGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEVLAQR*GCSACP
Trigger: CGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAAC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTTCTTGCTCAGCGGTaGGGATGCTCTGCTTGCCCG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVLAQR*GCSACP
Trigger: CGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGTCCTCCCGGTCCATaGGCACCTGGTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVCPPGP*APGESP
Trigger: AGGAGATTCACCAGGTGCTCATGGACCGGGAGGACA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGTCCTCCCGGTCCATaGGCACCTGGTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGECPPGP*APGESP
Trigger: AGGAGATTCACCAGGTGCTCATGGACCGGGAGGACA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGCAGTCAACCCCGTTaGAGGCATCGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVCSQPR*RHRMGP
Trigger: TGGACCCATCCGATGCCTTCAACGGGGTTGACTGCA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGAAACGAACCCCTGGTaGGAAGATGTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRETNPW*EDVRIE
Trigger: TTCAATCCTGACATCTTCTCACCAGGGGTTCGTTTC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCCTGTAAGTACGTCTTaGAGATGTGCTTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: KFLLSGGDALLARSRPSPPVSTS*RCAWPS
Trigger: GCTCGGCCAAGCACATCTTCAAGACGTACTTACAGG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATACATGAGGTCCCCGTaGATCTTCCGGTTCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPYMRSP*IFRFPG
Trigger: CCCGGGGAACCGGAAGATGCACGGGGACCTCATGTA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACCACCGCGTTGTACGTaGGGACGCCATTCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPPPRCT*GRHSGR
Trigger: ACGACCTGAATGGCGTCCGCACGTACAACGCGGTGG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGTGACACCACGGTCTTaGCGAAGTCGATGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEVTPRS*RSRWSR
Trigger: ACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCAC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGTGACACCACGGTCTTaGCGAAGTCGATGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGVTPRS*RSRWSR
Trigger: ACGGCTCCATCGACTTCGGCAAGACCGTGGTGTCAC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAAGAGGAGGTACCTGTaGTCCACGAAGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEKRRYL*STKAST
Trigger: GGTGGACGCCTTCGTGGAGCACAGGTACCTCCTCTT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGCGTCCTTCAGCAGCTaGTTCTGGTCCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRASFSS*FWSRTS
Trigger: TGAAGTTCGGGACCAGAAGCAGCTGCTGAAGGACGC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGCCTTGGGGTTGACGTaGTTGACCACGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEALGLT*LTTGKM
Trigger: CATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGCCTTGGGGTTGACGTaGTTGACCACGGGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGALGLT*LTTGKM
Trigger: CATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATCCTTCAGGAAGCCCTaGTGCACTTTGGCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSFRKP*CTLACP
Trigger: CGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAAGGA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCTGAGAAATCCCGTCTaGGCGTCACCCACTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGLRNPV*ASPTQE
Trigger: CTCCTGAGTGGGTGACGCGCAGACGGGATTTCTCAG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCGAACGGGTGGCGCTaGACCCTTTTCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESNGWR*TLFFCS
Trigger: GCTGCAGAAGAAAAGGGTCCAGCGCCACCCGTTCGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTCGAACGGGTGGCGCTaGACCCTTTTCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSNGWR*TLFFCS
Trigger: GCTGCAGAAGAAAAGGGTCCAGCGCCACCCGTTCGA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTCCAGCTGTACACCTaGAATGGGGTGGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVQLYT*NGVAIL
Trigger: GAGGATCGCCACCCCATTCCAGGTGTACAGCTGGAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACGGTCGTTGAGCACCTaGTGCCGCAGGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRSLST*CRRILR
Trigger: CCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTCCCGCCTCCTGTCCTaGAGGATCCTCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSRLLS*RILRLG
Trigger: TCCAAGTCTGAGGATCCTCCAGGACAGGAGGCGGGA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACGTCGTCTGCGGCGATaGTCTCTGCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRRLRR*SLPAPS
Trigger: TGAAGGAGCTGGCAGAGACCATCGCCGCAGACGACG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCGATTTTAAAGACGTaGTCCAGCTGGTGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPILKT*SSWWRA
Trigger: GGCCCGCCACCAGCTGGACCACGTCTTTAAAATCGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGAAGCAGTTCAGGAAGTaGCTGATGGCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRKQFRK*LMAAER
Trigger: CCTCTCAGCCGCCATCAGCCACTTCCTGAACTGCTT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTGAACGCGGGCTTGTaGCGACTGTCGAAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVNAGL*RLSKLY
Trigger: GTACAGCTTCGACAGTCGCCACAAGCCCGCGTTCAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTTGGCCTGCCCGCTCTaGAAGAAATGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRLACPL*KKWKAS
Trigger: GGATGCCTTCCATTTCTTCCAGAGCGGGCAGGCCAA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGCTGCGTCTTGTAGATaGTGTAACCCTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCAASCR*CNPPSR
Trigger: ACGAGAAGGAGGGTTACACCATCTACAAGACGCAGC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCACCCACTCAGGACTaGCTCGGGCTATGTACAGGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESPTQD*LGLCTG
Trigger: CCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGACCAGGAAGGGAGCTaGGCACCAGAGAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEDQEGS*APEKRH
Trigger: ATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGACCAGGAAGGGAGCTaGGCACCAGAGAAGCGACAT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVDQEGS*APEKRH
Trigger: ATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGGCGGGCTTGGGGTTaGAGTGATAAGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEWRAWG*SDKLWT
Trigger: AGTCCACAGCTTATCACTTCAACCCCAAGCCCGCCA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGAAACGAACCCCTGGTaGGAAGATGTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCETNPW*EDVRIE
Trigger: TTCAATCCTGACATCTTCTCACCAGGGGTTCGTTTC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTTTCGGCCTAAACCCTaGACTTTCAGACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRFRPKP*TFRQAG
Trigger: CCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTGGACCCTTTTCTTCTaGAGCACAGCGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCWTLFF*STAKFF
Trigger: GAAGAACTTCGCTGTGCTGCAGAAGAAAAGGGTCCA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGAGCTCCCTCGTCGTCTaGAGCTCCTCATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSSLVV*SSSFQS
Trigger: AGACTGGAATGAGGAGCTGCAGACGACGAGGGAGCT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAAGAGGAGGTACCTGTaGTCCACGAAGGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPKRRYL*STKAST
Trigger: GGTGGACGCCTTCGTGGAGCACAGGTACCTCCTCTT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTGCTGCACTTTGGCCTaGCCGCTCTGGAAGAAATGG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGCCTLA*PLWKKW
Trigger: CCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGATGACAATGACTTCCTaGCCGGTGGTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRMTMTS*PVVSSP
Trigger: GGGAGATGAGACCACCGGCCAGGAAGTCATTGTCAT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATCGAACGGGTGGCGCTaGACCCTTTTCTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSNGWR*TLFFCS
Trigger: GCTGCAGAAGAAAAGGGTCCAGCGCCACCCGTTCGA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTATCCTCTCGAACGGGTaGCGCTGGACCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGILSNG*RWTLFF
Trigger: GAAGAAAAGGGTCCAGCGCCACCCGTTCGAGAGGAT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGTCCAGCTGTACACCTaGAATGGGGTGGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPVQLYT*NGVAIL
Trigger: GAGGATCGCCACCCCATTCCAGGTGTACAGCTGGAC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATCCCGCCTCCTGTCCTaGAGGATCCTCAGACTTGGA +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSRLLS*RILRLG
Trigger: TCCAAGTCTGAGGATCCTCCAGGACAGGAGGCGGGA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCCCGAACTTCATCCTaGCAGGACTCAGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSRTSS*QDSGKR
Trigger: TCGTTTCCCTGAGTCCTGCCAGGATGAAGTTCGGGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAAGCAGTTCAGGAAGTaGCTGATGGCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEKQFRK*LMAAER
Trigger: CCTCTCAGCCGCCATCAGCCACTTCCTGAACTGCTT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGAAGCAGTTCAGGAAGTaGCTGATGGCGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVKQFRK*LMAAER
Trigger: CCTCTCAGCCGCCATCAGCCACTTCCTGAACTGCTT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTCTTATTCCGCTTCTTaGAGACCAGCTCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESYSAS*RPARRR
Trigger: CCGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTCTTATTCCGCTTCTTaGAGACCAGCTCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSYSAS*RPARRR
Trigger: CCGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTTGGCCTGCCCGCTCTaGAAGAAATGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVLACPL*KKWKAS
Trigger: GGATGCCTTCCATTTCTTCCAGAGCGGGCAGGCCAA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTTGGCCTGCCCGCTCTaGAAGAAATGGAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGELACPL*KKWKAS
Trigger: GGATGCCTTCCATTTCTTCCAGAGCGGGCAGGCCAA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGACTCGGAGCTTTCCTTaGTCTTCTCATGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRTRSFP*SSHGPR
Trigger: GCGAGGACCATGAGAAGACCAAGGAAAGCTCCGAGT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTTCTCCAGGTCTTTTTaGCTGAGAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QQANPDPSVREQQPDHASFSRSF*LRGMKR
Trigger: CCTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGAAAAGCCCGTGTCCTaGATGACAATGACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYREKPVS*MTMTSW
Trigger: CCAGGAAGTCATTGTCATTCAGGACACGGGCTTTTC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATGGCGGGCTTGGGGTTaGAGTGATAAGCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPWRAWG*SDKLWT
Trigger: AGTCCACAGCTTATCACTTCAACCCCAAGCCCGCCA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAGTCGCTGTGCACCTTaGATATGGCCCTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESRCAP*IWPFLG
Trigger: TCCGAGAAAGGGCCATATTCAAGGTGCACAGCGACT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAGTCGCTGTGCACCTTaGATATGGCCCTTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSRCAP*IWPFLG
Trigger: TCCGAGAAAGGGCCATATTCAAGGTGCACAGCGACT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCGTCGAAGCCCAGGCTaGAGAAGATGTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRRSPG*RRCCSR
Trigger: TCTGGAACAACATCTTCTTCAGCCTGGGCTTCGACG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGCGTCGAAGCCCAGGCTaGAGAAGATGTTGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGERRSPG*RRCCSR
Trigger: TCTGGAACAACATCTTCTTCAGCCTGGGCTTCGACG...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCCTGTAAGTACGTCTTaGAGATGTGCTTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVPVSTS*RCAWPS
Trigger: GCTCGGCCAAGCACATCTTCAAGACGTACTTACAGG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGCATCATCTATTCATTaGACCAGCGCAAAAACACCT +
Preference number: 4 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRASSIH*TSAKTP
Trigger: AGGTGTTTTTGCGCTGGTTCAATGAATAGATGATGC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAGCTCCCTCGTCGTCTaGAGCTCCTCATTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSSLVV*SSSFQS
Trigger: AGACTGGAATGAGGAGCTGCAGACGACGAGGGAGCT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTTCTGCTGCATCAGCTaGAAGGCGGCCAGCTTCATA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVFCCIS*KAASFI
Trigger: TATGAAGCTGGCCGCCTTGCAGCTGATGCAGCAGAA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGCGTCCTTCAGCAGCTaGTTCTGGTCCCGAACTTCA +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPASFSS*FWSRTS
Trigger: TGAAGTTCGGGACCAGAAGCAGCTGCTGAAGGACGC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTACGTCTTGAAGATGTaGTTGGCCGAGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEYVLKM*LAERVM
Trigger: CATCACCCGCTCGGCCAAGCACATCTTCAAGACGTA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGTTACTCAGGGCCTCTaGGTAGTCGCCCATGATGTA +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEVTQGL*VVAHDV
Trigger: TACATCATGGGCGACTACGCAGAGGCCCTGAGTAAC...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAGTACAGGGCCAGGTaGATGTATTCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGQYRAR*MYSWMV
Trigger: CACCATCCAGGAATACATGCACCTGGCCCTGTACTG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCAGTACAGGGCCAGGTaGATGTATTCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVQYRAR*MYSWMV
Trigger: CACCATCCAGGAATACATGCACCTGGCCCTGTACTG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGATGACAATGACTTCCTaGCCGGTGGTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEMTMTS*PVVSSP
Trigger: GGGAGATGAGACCACCGGCCAGGAAGTCATTGTCAT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAATCCTCTCGAACGGGTaGCGCTGGACCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPILSNG*RWTLFF
Trigger: GAAGAAAAGGGTCCAGCGCCACCCGTTCGAGAGGAT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTCCTTCAGCAGGACCTaGATCCCTGTTTTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSFSRT*IPVFSE
Trigger: CTCGCTGAAAACAGGGATCCAGGTCCTGCTGAAGGA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTCCTTCAGCAGGACCTaGATCCCTGTTTTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSFSRT*IPVFSE
Trigger: CTCGCTGAAAACAGGGATCCAGGTCCTGCTGAAGGA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGCTGCGTCTTGTAGATaGTGTAACCCTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRAASCR*CNPPSR
Trigger: ACGAGAAGGAGGGTTACACCATCTACAAGACGCAGC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGAGAAGATGTCAGGATTaGAGCGAATGTCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRRCQD*SECRRR
Trigger: CCGCCTTCGACATTCGCTTCAATCCTGACATCTTCT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAGAAGATGTCAGGATTaGAGCGAATGTCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGERRCQD*SECRRR
Trigger: CCGCCTTCGACATTCGCTTCAATCCTGACATCTTCT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAGAAGATGTCAGGATTaGAGCGAATGTCGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGRRCQD*SECRRR
Trigger: CCGCCTTCGACATTCGCTTCAATCCTGACATCTTCT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACCTGTAAGTACGTCTTaGAGATGTGCTTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPPVSTS*RCAWPS
Trigger: GCTCGGCCAAGCACATCTTCAAGACGTACTTACAGG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGTTACTCAGGGCCTCTaGGTAGTCGCCCATGATGTA +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPVTQGL*VVAHDV
Trigger: TACATCATGGGCGACTACGCAGAGGCCCTGAGTAAC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAATGACAATGACTTCCTaGCCGGTGGTCTCATCTCCC +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPMTMTS*PVVSSP
Trigger: GGGAGATGAGACCACCGGCCAGGAAGTCATTGTCAT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGCTGCGTCTTGTAGATaGTGTAACCCTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVAASCR*CNPPSR
Trigger: ACGAGAAGGAGGGTTACACCATCTACAAGACGCAGC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGCTGCGTCTTGTAGATaGTGTAACCCTCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGAASCR*CNPPSR
Trigger: ACGAGAAGGAGGGTTACACCATCTACAAGACGCAGC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGAAACGAACCCCTGGTaGGAAGATGTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVETNPW*EDVRIE
Trigger: TTCAATCCTGACATCTTCTCACCAGGGGTTCGTTTC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGGACCCTTTTCTTCTaGAGCACAGCGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVWTLFF*STAKFF
Trigger: GAAGAACTTCGCTGTGCTGCAGAAGAAAAGGGTCCA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR GCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGGACCCTTTTCTTCTaGAGCACAGCGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEWTLFF*STAKFF
Trigger: GAAGAACTTCGCTGTGCTGCAGAAGAAAAGGGTCCA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGAGTCAAAGTAGTTCTTaGCCTCCTGGCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSQSSS*PPGRCS
Trigger: AGAACATCTGCCAGGAGGCCAAGAACTACTTTGACT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGAAACGAACCCCTGGTaGGAAGATGTCAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPETNPW*EDVRIE
Trigger: TTCAATCCTGACATCTTCTCACCAGGGGTTCGTTTC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGAGTCAAAGTAGTTCTTaGCCTCCTGGCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGESQSSS*PPGRCS
Trigger: AGAACATCTGCCAGGAGGCCAAGAACTACTTTGACT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAGTCAAAGTAGTTCTTaGCCTCCTGGCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSQSSS*PPGRCS
Trigger: AGAACATCTGCCAGGAGGCCAAGAACTACTTTGACT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGAGTCAAAGTAGTTCTTaGCCTCCTGGCAGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSQSSS*PPGRCS
Trigger: AGAACATCTGCCAGGAGGCCAAGAACTACTTTGACT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTTCTCCAGGTCTTTTTaGCTGAGAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QESPTQDWLGLCTGERNGFSRSF*LRGMKR
Trigger: CCTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTTCTCCAGGTCTTTTTaGCTGAGAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: THSGVTHSGLARAMYRGEFSRSF*LRGMKR
Trigger: CCTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATTCTCCAGGTCTTTTTaGCTGAGAGGAATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPFSRSF*LRGMKR
Trigger: CCTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR TCA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGCATCATCTATTCATTaGACCAGCGCAAAAACACCT +
Preference number: 4 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPASSIH*TSAKTP
Trigger: AGGTGTTTTTGCGCTGGTTCAATGAATAGATGATGC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 90 bp CCTCGGCTGTCCGCGCCGCCCGCCGCGCCACTAACCCAAGTGCCCTaGGCGCCGCGGCTGCTGAGGGAAGGACGGAGTCACCGGCCCACG +
Preference number: 5 (lower is better)
Translates to: PRLSAPPAAPLTQVP*APRLLREGRSHRPT
Trigger: CGTGGGCCGGTGACTCCGTCCTTCCCTCAGCAGCCGCGGCGCGCAGGGCACTTGGGTTAGTGGCGCGGCGGGCGGCGCGGACAGCCGAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574426.7
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGGTGCCGCAGGATCTaGAGGGGCCGACTCGTGCGC +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNWCRRI*RGRLVR
Trigger: GCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACGGTGGGCCACGGGGTTaGGGTAGGAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNGGPRG*GRSSGS
Trigger: GCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACC...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTCCACGTCCACCGCGTaGTACGTGCGGACGCCATTC +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNSTSTA*YVRTPF
Trigger: GAATGGCGTCCGCACGTACAACGCGGTGGACGTGGA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCCTCGTCACGGTCGTaGAGCACCTGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSSSRS*STWCRR
Trigger: CCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTCACCTCTGCCAGCGTaGCCCCGTCCACGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLSPLPA*PRPRAG
Trigger: TCCTGCCCGTGGACGGGGCAACGCTGGCAGAGGTGA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACAAGGCATCCGAGGCCTaGGGGTTGACGTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNKASEA*GLTCLT
Trigger: GGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTT...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGGGGATGCTCTGCTaGCCCGCTCACGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLVGMLC*PAHAHP
Trigger: GGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCAC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 90 bp CAAACCAAGCCTGGGAAGCCTCGAGCGGAGCTTCACTCCCAGGGCTaGAGCCCTGCGCACAGGGGATGCCTGGGAGGCCGCCGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: QTKPGKPRAELHSQG*SPAHRGCLGGRRGA
Trigger: TGCTCCGCGGCGGCCTCCCAGGCATCCCCTGTGCGCAGGGCTGCAGCCCTGGGAGTGAAGCTCCGCTCGAGGCTTCCCAGGCTTGGTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576309.5
CDS GCA 90 bp CGCATCACCTCTGCCAGCGTTGCCCCGTCCACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACCTGCGGGCTGCAGCAGCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RITSASVAPSTGRTA*SMQSFTCGLQQLRP
Trigger: GGGCCTGAGCTGCTGCAGCCCGCAGGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGTGGACGGGGCAACGCTGGCAGAGGTGATGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573641.1
ENST00000574166.1
CDS CCA 90 bp CGGTGGTCTCATCTCCCGGGCCGGCCTCGTCAAGCCCATTTTCCCTaGGTGGCTCGGCCGCCGCCGCCTCCTTCTTCAGGCTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: RWSHLPGRPRQAHFP*VARPPPPPSSGSLG
Trigger: GCCCAGAGAGCCTGAAGAAGGAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGGCTTGACGAGGCCGGCCCGGGAGATGAGACCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000571566.1
ENST00000574426.7
ENST00000576309.5
ENST00000576885.5
ENST00000651024.2
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGATGGAGCCGACCGCCTaGCACGCGTTGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLMEPTA*HALRIT
Trigger: GGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCAT...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTCGGTGAACGCGGGCTaGTGGCGACTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTSVNAG*WRLSKL
Trigger: CAGCTTCGACAGTCGCCACAAGCCCGCGTTCACCGA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTGGCTGAGGGCCACCTaGAGGGCCTTGGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRWLRAT*RALGPW
Trigger: CCACGGGCCCAAGGCCCTCAAGGTGGCCCTCAGCCA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp GGTCTCATCTCCCGGGCCGGCCTCGTCAAGCCCATTTTCCCTGGGTaGCTCGGCCGCCGCCGCCTCCTTCTTCAGGCTCTCTGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: GLISRAGLVKPIFPG*LGRRRLLLQALWAV
Trigger: GACTGCCCAGAGAGCCTGAAGAAGGAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGGCTTGACGAGGCCGGCCCGGGAGATGAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000571566.1
ENST00000574426.7
ENST00000576309.5
ENST00000576885.5
ENST00000651024.2
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTCTCCTCGCTGGGGTaGATGGCCATCACGTTGCCG +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLVSSLG*MAITLP
Trigger: CGGCAACGTGATGGCCATCAACCCCAGCGAGGAGAC...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGACCGCCTTGCACGCGTaGCGGATCACCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRTALHA*RITSRL
Trigger: GAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGGT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTTGGGGTTGACGTGCTaGACCACGGGGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNLGLTC*TTGKML
Trigger: CAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGAAGGCATCCGAGGCCTaGGGGTTGACGTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTKASEA*GLTCLT
Trigger: GGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGGCTGAGGGCCACCTaGAGGGCCTTGGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKWLRAT*RALGPW
Trigger: CCACGGGCCCAAGGCCCTCAAGGTGGCCCTCAGCCA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGGTGGGGATGCTCTGCTaGCCCGCTCACGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRVGMLC*PAHAHP
Trigger: GGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCAC...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGTGGGGATGCTCTGCTaGCCCGCTCACGCCCATCCC +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASVGMLC*PAHAHP
Trigger: GGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCAC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS TCA 90 bp GGCTCCGCAGCACCAGCTCCAGCACCTTGCCCAGGTAGCGCATGTTaGTGCCCCGCTGGCGCATCACCTCTGCCAGCGTTGCCCCGTCCA +
Preference number: 5 (lower is better)
Translates to: GSAAPAPAPCPGSAC*CPAGASPLPALPRP
Trigger: TGGACGGGGCAACGCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACATGCGCTACCTGGGCAAGGTGCTGGAGCTGGTGCTGCGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000573641.1
ENST00000574166.1
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp CTGTGCCGTCGTCTGCGGCGATGGTCTCTGCCAGCTCCTTCACCTTaGCCAGGCCGCTGGCGCTGCTACCCTCCTCCTCACTTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: LCRRLRRWSLPAPSP*PGRWRCYPPPHFPP
Trigger: AGGCGGGAAGTGAGGAGGAGGGTAGCAGCGCCAGCGGCCTGGCCAAGGTGAAGGAGCTGGCAGAGACCATCGCCGCAGACGACGGCACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGGTGCCGCAGGATCTaGAGGGGCCGACTCGTGCGC +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKWCRRI*RGRLVR
Trigger: GCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTGGTGCCGCAGGATCTaGAGGGGCCGACTCGTGCGC +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCWCRRI*RGRLVR
Trigger: GCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTTGCCAATGATGCCCTaGCACTCGACCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTLPMMP*HSTEEQ
Trigger: CTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCACCGCCTTGCACGCGTaGCGGATCACCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCTALHA*RITSRL
Trigger: GAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGGT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTATGGAGCCGACCGCCTaGCACGCGTTGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASMEPTA*HALRIT
Trigger: GGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCAT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTCACCTCTGCCAGCGTaGCCCCGTCCACGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSPLPA*PRPRAG
Trigger: TCCTGCCCGTGGACGGGGCAACGCTGGCAGAGGTGA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACCCCTGTAAGTACGTCTaGAAGATGTGCTTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNPCKYV*KMCLAE
Trigger: CTCGGCCAAGCACATCTTCAAGACGTACTTACAGGG...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCCGAGGCCTTGGGGTaGACGTGCTTGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASSEALG*TCLTTG
Trigger: CCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTGGCTGAGGGCCACCTaGAGGGCCTTGGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPWLRAT*RALGPW
Trigger: CCACGGGCCCAAGGCCCTCAAGGTGGCCCTCAGCCA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 90 bp GAGGAGCAGAGCTCCACCTCCTCGTCACGGTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGCCGACTCGTGCGCTCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: EEQSSTSSSRSLSTW*RRILRGRLVRSSSS
Trigger: GGAGCTGCTGGAGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGAGGTGGAGCTCTGCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 90 bp AGGAAGTGGCTGATGGCGGCTGAGAGGCCGGAGAGCTCGACTCCCTaGGAGGCAGGTTGGATCCGAGTCATGAGGGCCCTCAGCCCCACC +
Preference number: 5 (lower is better)
Translates to: RKWLMAAERPESSTP*EAGWIRVMRALSPT
Trigger: GGTGGGGCTGAGGGCCCTCATGACTCGGATCCAACCTGCCTCGCAGGGAGTCGAGCTCTCCGGCCTCTCAGCCGCCATCAGCCACTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS CCA 90 bp ACCGAGGAGCAGAGCTCCACCTCCTCGTCACGGTCGTTGAGCACCTaGTGCCGCAGGATCTTGAGGGGCCGACTCGTGCGCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TEEQSSTSSSRSLST*CRRILRGRLVRSSS
Trigger: GCTGCTGGAGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGAGGTGGAGCTCTGCTCCTCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp CACCTCAGGCTCTTTCCCGACGCCCCACACCACCCTGGGAGGCCATaGCCAGCCGCAGAGCGGACGGGTGGCACCTGTAAGTACGTCTTG +
Preference number: 5 (lower is better)
Translates to: HLRLFPDAPHHPGRP*PAAERTGGTCKYVL
Trigger: CAAGACGTACTTACAGGTGCCACCCGTCCGCTCTGCGGCTGGCCATGGCCTCCCAGGGTGGTGTGGGGCGTCGGGAAAGAGCCTGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTTGCAGTCAACCCCGTaGAAGGCATCGGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLLQSTP*KASDGS
Trigger: GGACCCATCCGATGCCTTCAACGGGGTTGACTGCAA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCCGCTCAGGCAGGTTCTaGCGAGGCAGCTCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCRSGRF*RGSSLV
Trigger: GACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGCG...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTTGATGGCCATCACGTaGCCGTCAATGACGGCCATG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTLMAIT*PSMTAM
Trigger: CATGGCCGTCATTGACGGCAACGTGATGGCCATCAA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTGTCTCCTCGCTGGGGTaGATGGCCATCACGTTGCCG +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASVSSLG*MAITLP
Trigger: CGGCAACGTGATGGCCATCAACCCCAGCGAGGAGAC...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTCCACGTCCACCGCGTaGTACGTGCGGACGCCATTC +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASSTSTA*YVRTPF
Trigger: GAATGGCGTCCGCACGTACAACGCGGTGGACGTGGA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCCACGTCCACCGCGTaGTACGTGCGGACGCCATTC +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSTSTA*YVRTPF
Trigger: GAATGGCGTCCGCACGTACAACGCGGTGGACGTGGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTCCTCGTCACGGTCGTaGAGCACCTGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCSSSRS*STWCRR
Trigger: CCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGATGGAGCCGACCGCCTaGCACGCGTTGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKMEPTA*HALRIT
Trigger: GGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCAT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTCGGTGAACGCGGGCTaGTGGCGACTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRSVNAG*WRLSKL
Trigger: CAGCTTCGACAGTCGCCACAAGCCCGCGTTCACCGA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGTTGGGGTTGACGTGCTaGACCACGGGGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTLGLTC*TTGKML
Trigger: CAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAA...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCCGAGGCCTTGGGGTaGACGTGCTTGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSEALG*TCLTTG
Trigger: CCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAAGCCCTGCTGCACTTaGGCCTGCCCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASKPCCT*ACPLWK
Trigger: CTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp ATGGCGGCTGAGAGGCCGGAGAGCTCGACTCCCTGCGAGGCAGGTTaGATCCGAGTCATGAGGGCCCTCAGCCCCACCTCAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: MAAERPESSTPCEAG*IRVMRALSPTSGSF
Trigger: GAAAGAGCCTGAGGTGGGGCTGAGGGCCCTCATGACTCGGATCCAACCTGCCTCGCAGGGAGTCGAGCTCTCCGGCCTCTCAGCCGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGACAGCGAAGTTCTTCTaGAAGGTCGGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTTAKFF*KVGLIW
Trigger: CCAGATCAGCCCGACCTTCAAGAAGAACTTCGCTGT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCGTCTCCTCGCTGGGGTaGATGGCCATCACGTTGCCG +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCVSSLG*MAITLP
Trigger: CGGCAACGTGATGGCCATCAACCCCAGCGAGGAGAC...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTGTGACACCACGGTCTaGCCGAAGTCGATGGAGCCG +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASCDTTV*PKSMEP
Trigger: CGGCTCCATCGACTTCGGCAAGACCGTGGTGTCACA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTGGTGCCGCAGGATCTaGAGGGGCCGACTCGTGCGC +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRWCRRI*RGRLVR
Trigger: GCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTCCTCGTCACGGTCGTaGAGCACCTGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSSSRS*STWCRR
Trigger: CCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGACCGCCTTGCACGCGTaGCGGATCACCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRTALHA*RITSRL
Trigger: GAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGGT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCACCTCTGCCAGCGTaGCCCCGTCCACGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSPLPA*PRPRAG
Trigger: TCCTGCCCGTGGACGGGGCAACGCTGGCAGAGGTGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGCCCTGTAAGTACGTCTaGAAGATGTGCTTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTPCKYV*KMCLAE
Trigger: CTCGGCCAAGCACATCTTCAAGACGTACTTACAGGG...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCGGTGGGCCACGGGGTTaGGGTAGGAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPGGPRG*GRSSGS
Trigger: GCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACC...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTCGGTGAACGCGGGCTaGTGGCGACTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKSVNAG*WRLSKL
Trigger: CAGCTTCGACAGTCGCCACAAGCCCGCGTTCACCGA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTTGGGGTTGACGTGCTaGACCACGGGGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLLGLTC*TTGKML
Trigger: CAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTCCGAGGCCTTGGGGTaGACGTGCTTGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSEALG*TCLTTG
Trigger: CCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAAGGCATCCGAGGCCTaGGGGTTGACGTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRKASEA*GLTCLT
Trigger: GGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTAAGGCATCCGAGGCCTaGGGGTTGACGTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASKASEA*GLTCLT
Trigger: GGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTT...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGAAGCCCTGCTGCACTTaGGCCTGCCCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKKPCCT*ACPLWK
Trigger: CTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGACCAGCCCGATGTTGTaGTCCAGCAGCGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRTSPML*SSSAIS
Trigger: CGAGATGGCGCTGCTGGACAACAACATCGGGCTGGT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGGCTGAGGGCCACCTaGAGGGCCTTGGGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVWLRAT*RALGPW
Trigger: CCACGGGCCCAAGGCCCTCAAGGTGGCCCTCAGCCA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp CTTCTTGGAGACCAGCTCGTCGGCGGGCAGGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCAGTTCAGGAAGTGGCTGATGGCGGC +
Preference number: 5 (lower is better)
Translates to: LLGDQLVGGQVGHGV*VGAQEAVQEVADGG
Trigger: GCCGCCATCAGCCACTTCCTGAACTGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACCTGCCCGCCGACGAGCTGGTCTCCAAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574166.1
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCTCCACGTCCACCGCGTaGTACGTGCGGACGCCATTC +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPSTSTA*YVRTPF
Trigger: GAATGGCGTCCGCACGTACAACGCGGTGGACGTGGA...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGACCGCCTTGCACGCGTaGCGGATCACCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVTALHA*RITSRL
Trigger: GAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGGT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTACCGCCTTGCACGCGTaGCGGATCACCTCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGTALHA*RITSRL
Trigger: GAGCCGGGAGGTGATCCGCAACGCGTGCAAGGCGGT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGATGGAGCCGACCGCCTaGCACGCGTTGCGGATCACC +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRMEPTA*HALRIT
Trigger: GGTGATCCGCAACGCGTGCAAGGCGGTCGGCTCCAT...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTCACCTCTGCCAGCGTaGCCCCGTCCACGGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSPLPA*PRPRAG
Trigger: TCCTGCCCGTGGACGGGGCAACGCTGGCAGAGGTGA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGTGGGCCACGGGGTTaGGGTAGGAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRGGPRG*GRSSGS
Trigger: GCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCTCTTATTCCGCTTCTaGGAGACCAGCTCGTCGGCG +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASLLFRF*ETSSSA
Trigger: CGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGAG...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCACCACGGGGAAGATGTaGAGCACGTCCTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCTTGKM*STSSSV
Trigger: CACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGACCACGGGGAAGATGTaGAGCACGTCCTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKTTGKM*STSSSV
Trigger: CACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCAAGCCCTGCTGCACTTaGGCCTGCCCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPKPCCT*ACPLWK
Trigger: CTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTT...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS TCA 90 bp AGGTGCGCAGCAGGTCGAGGATGTAGTGGCGCCCGTCGTTGCCAATaGTGCCCTTGCACTCGACCGAGGAGCAGAGCTCCACCTCCTCGT +
Preference number: 5 (lower is better)
Translates to: RCAAGRGCSGARRCQ*CPCTRPRSRAPPPR
Trigger: ACGAGGAGGTGGAGCTCTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGCGCCACTACATCCTCGACCTGCTGCGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp AGAGAGCGCCGGTGGGTCTTTCCTGGCCAGGCCGCAGGGGGCCTTTaGGAAGCACCCGAGGCCTATAACCTTCGGAGCGTTTGTCAAGCT +
Preference number: 5 (lower is better)
Translates to: RERRWVFPGQAAGGL*EAPEAYNLRSVCQA
Trigger: AGCTTGACAAACGCTCCGAAGGTTATAGGCCTCGGGTGCTTCCCAAAGGCCCCCTGCGGCCTGGCCAGGAAAGACCCACCGGCGCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571566.1
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTTGCAGTCAACCCCGTaGAAGGCATCGGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKLQSTP*KASDGS
Trigger: GGACCCATCCGATGCCTTCAACGGGGTTGACTGCAA...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTTGCAGTCAACCCCGTaGAAGGCATCGGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCLQSTP*KASDGS
Trigger: GGACCCATCCGATGCCTTCAACGGGGTTGACTGCAA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCGCTCAGGCAGGTTCTaGCGAGGCAGCTCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVRSGRF*RGSSLV
Trigger: GACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGCG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGCAAGCCAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTTTGATGGCCATCACGTaGCCGTCAATGACGGCCATG +
Preference number: 5 (lower is better)
Translates to: QQANPDPSVREQQPDHASLMAIT*PSMTAM
Trigger: CATGGCCGTCATTGACGGCAACGTGATGGCCATCAA...ACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTGGCTTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATGGTGCCGCAGGATCTaGAGGGGCCGACTCGTGCGC +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPWCRRI*RGRLVR
Trigger: GCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTCCTCGTCACGGTCGTaGAGCACCTGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSSSRS*STWCRR
Trigger: CCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTTGCCAATGATGCCCTaGCACTCGACCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCLPMMP*HSTEEQ
Trigger: CTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGGTGGGCCACGGGGTTaGGGTAGGAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGGGPRG*GRSSGS
Trigger: GCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTCGGTGAACGCGGGCTaGTGGCGACTGTCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRSVNAG*WRLSKL
Trigger: CAGCTTCGACAGTCGCCACAAGCCCGCGTTCACCGA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTCCGAGGCCTTGGGGTaGACGTGCTTGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGSEALG*TCLTTG
Trigger: CCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTCCGAGGCCTTGGGGTaGACGTGCTTGACCACGGGG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVSEALG*TCLTTG
Trigger: CCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CACAGCCAGGGGCGCACTCGCACACGCCGGCCGGACGGCGGGGGCCGAAGCAACTGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 5 (lower is better)
Translates to: HSQGRTRTRRPDGGGRSNCIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...GTTGCTTCGGCCCCCGCCGTCCGGCCGGCGTGTGCGAGTGCGCCCCTGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGGCAACTCGTCCGTCTaGATAACCATGGTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKGNSSV*ITMVAG
Trigger: TCCCGCCACCATGGTTATCAAGACGGACGAGTTGCC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS GCA 90 bp AGCAGCCGCTCAGGCAGGTTCTTGCGAGGCAGCTCCCTCGTCGTCTaGAGCTCCTCATTCCAGTCTCGGGTCTGTCCAGGAATGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSRSGRFLRGSSLVV*SSSFQSRVCPGMCS
Trigger: GGAGCACATTCCTGGACAGACCCGAGACTGGAATGAGGAGCTGCAGACGACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGCGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000572129.1
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp AGCATGACTGATGGCAGCTCTCGTGCTCTTCCCACAAACCAAGCCTaGGAAGCCTCGAGCGGAGCTTCACTCCCAGGGCTGCAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SMTDGSSRALPTNQA*EASSGASLPGLQPC
Trigger: GCAGGGCTGCAGCCCTGGGAGTGAAGCTCCGCTCGAGGCTTCCCAGGCTTGGTTTGTGGGAAGAGCACGAGAGCTGCCATCAGTCATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576309.5
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACGCTCAGGCAGGTTCTaGCGAGGCAGCTCCCTCGTC +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPRSGRF*RGSSLV
Trigger: GACGAGGGAGCTGCCTCGCAAGAACCTGCCTGAGCG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGAAGTCGCTGTGCACCTaGAATATGGCCCTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRKSLCT*NMALSR
Trigger: CCGAGAAAGGGCCATATTCAAGGTGCACAGCGACTT...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTCTCCTCGCTGGGGTaGATGGCCATCACGTTGCCG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVSSLG*MAITLP
Trigger: CGGCAACGTGATGGCCATCAACCCCAGCGAGGAGAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGTCTCCTCGCTGGGGTaGATGGCCATCACGTTGCCG +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGVSSLG*MAITLP
Trigger: CGGCAACGTGATGGCCATCAACCCCAGCGAGGAGAC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATCCTCGTCACGGTCGTaGAGCACCTGGTGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPSSSRS*STWCRR
Trigger: CCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGGTCTTGAAGATGTGCTaGGCCGAGCGGGTGATGAGT +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKVLKMC*AERVMS
Trigger: ACTCATCACCCGCTCGGCCAAGCACATCTTCAAGAC...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGGTGGGCCACGGGGTTaGGGTAGGAGCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPGGPRG*GRSSGS
Trigger: GCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTAAGCCCTGCTGCACTTaGGCCTGCCCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGKPCCT*ACPLWK
Trigger: CTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGGTGACGATTCTCCAGGTCTTTTaGGCTGAGAGGAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: LFRPQARPLLPQSGSLVTILQVF*AERNEE
Trigger: CTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAAT...CGTCACCAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS TCA 90 bp CCACGGGGTTTGGGTAGGAGCTCAGGAAGCAGTTCAGGAAGTGGCTaGTGGCGGCTGAGAGGCCGGAGAGCTCGACTCCCTGTAAGTACG +
Preference number: 5 (lower is better)
Translates to: PRGLGRSSGSSSGSG*WRLRGRRARLPVST
Trigger: CGTACTTACAGGGAGTCGAGCTCTCCGGCCTCTCAGCCGCCATCAGCCACTTCCTGAACTGCTTCCTGAGCTCCTACCCAAACCCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574166.1
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp CAGCCCTCCTTCAGGAAGCCCTGCTGCACTTTGGCCTGCCCGCTCTaGAAGAAATGGAAGGCATCCGAGGCCTTGGGGTTGACGTGCTTG +
Preference number: 5 (lower is better)
Translates to: QPSFRKPCCTLACPL*KKWKASEALGLTCL
Trigger: CAAGCACGTCAACCCCAAGGCCTCGGATGCCTTCCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAAGGAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTTGCAGTCAACCCCGTaGAAGGCATCGGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRLQSTP*KASDGS
Trigger: GGACCCATCCGATGCCTTCAACGGGGTTGACTGCAA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCAAGTCGCTGTGCACCTaGAATATGGCCCTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCKSLCT*NMALSR
Trigger: CCGAGAAAGGGCCATATTCAAGGTGCACAGCGACTT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCAGCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGAAGTCGCTGTGCACCTaGAATATGGCCCTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: AARPRQSQRRLPSRPKLKKSLCT*NMALSR
Trigger: CCGAGAAAGGGCCATATTCAAGGTGCACAGCGACTT...CTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTGTGACACCACGGTCTaGCCGAAGTCGATGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVCDTTV*PKSMEP
Trigger: CGGCTCCATCGACTTCGGCAAGACCGTGGTGTCACA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTGTGACACCACGGTCTaGCCGAAGTCGATGGAGCCG +
Preference number: 5 (lower is better)
Translates to: THSGVTHSGLARAMYRGECDTTV*PKSMEP
Trigger: CGGCTCCATCGACTTCGGCAAGACCGTGGTGTCACA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGTTGCCAATGATGCCCTaGCACTCGACCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRLPMMP*HSTEEQ
Trigger: CTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAA...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGCTCTTATTCCGCTTCTaGGAGACCAGCTCGTCGGCG +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRLLFRF*ETSSSA
Trigger: CGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGAG...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGACCACGGGGAAGATGTaGAGCACGTCCTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: THSGVTHSGLARAMYRGETTGKM*STSSSV
Trigger: CACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGACCACGGGGAAGATGTaGAGCACGTCCTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVTTGKM*STSSSV
Trigger: CACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAAGCCCTGCTGCACTTaGGCCTGCCCGCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPKPCCT*ACPLWK
Trigger: CTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGACCAGCCCGATGTTGTaGTCCAGCAGCGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVTSPML*SSSAIS
Trigger: CGAGATGGCGCTGCTGGACAACAACATCGGGCTGGT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGACCAGCCCGATGTTGTaGTCCAGCAGCGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: THSGVTHSGLARAMYRGETSPML*SSSAIS
Trigger: CGAGATGGCGCTGCTGGACAACAACATCGGGCTGGT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp ACGGGGAAGATGTTGAGCACGTCCTCCTCGGTGAACGCGGGCTTGTaGCGACTGTCGAAGCTGTACTCCTTCAGCAGGACCTGGATCCCT +
Preference number: 5 (lower is better)
Translates to: TGKMLSTSSSVNAGL*RLSKLYSFSRTWIP
Trigger: AGGGATCCAGGTCCTGCTGAAGGAGTACAGCTTCGACAGTCGCCACAAGCCCGCGTTCACCGAGGAGGACGTGCTCAACATCTTCCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574210.5
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTTTGCAGTCAACCCCGTaGAAGGCATCGGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGLQSTP*KASDGS
Trigger: GGACCCATCCGATGCCTTCAACGGGGTTGACTGCAA...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATGTGACACCACGGTCTaGCCGAAGTCGATGGAGCCG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPCDTTV*PKSMEP
Trigger: CGGCTCCATCGACTTCGGCAAGACCGTGGTGTCACA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTTGCCAATGATGCCCTaGCACTCGACCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: THSGVTHSGLARAMYRGELPMMP*HSTEEQ
Trigger: CTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CGCGTCACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGTCTTGAAGATGTGCTaGGCCGAGCGGGTGATGAGT +
Preference number: 5 (lower is better)
Translates to: RVTHSGVTHSGLARAMYRVLKMC*AERVMS
Trigger: ACTCATCACCCGCTCGGCCAAGCACATCTTCAAGAC...CCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGTGACGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp AAGTTCTTGCTCAGCGGTGGGGATGCTCTGCTTGCCCGCTCACGCCCATCCCCCCCCTGTAAGTACGTCTaGAAGATGTGCTTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: KFLLSGGDALLARSRPSPPCKYV*KMCLAE
Trigger: CTCGGCCAAGCACATCTTCAAGACGTACTTACAGGG...GGGGGATGGGCGTGAGCGGGCAAGCAGAGCATCCCCACCGCTGAGCAAGAACTT
60% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGCTCTTATTCCGCTTCTaGGAGACCAGCTCGTCGGCG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVLLFRF*ETSSSA
Trigger: CGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGAG...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCTCTTATTCCGCTTCTaGGAGACCAGCTCGTCGGCG +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGLLFRF*ETSSSA
Trigger: CGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGAG...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAACCAGCCCGATGTTGTaGTCCAGCAGCGCCATCTCG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPTSPML*SSSAIS
Trigger: CGAGATGGCGCTGCTGGACAACAACATCGGGCTGGT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp TGCTTCCTCTTCCGCCCGCAGGCTCGCCCCCTTCTCCCGCAGTCGGGCTCCCTGTGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 5 (lower is better)
Translates to: CFLFRPQARPLLPQSGSLCIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...CAGGGAGCCCGACTGCGGGAGAAGGGGGCGAGCCTGCGGGCGGAAGAGGAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTGGCAACTCGTCCGTCTaGATAACCATGGTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGGNSSV*ITMVAG
Trigger: TCCCGCCACCATGGTTATCAAGACGGACGAGTTGCC...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS TCA 90 bp GGTCAGAGAATGCTGCAGAGGGGACATTGGGACCAGGTCTTGCAGTaGGTTGAAGTGCTCCAGGCAGAGAGCGCCGGTGGGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GQRMLQRGHWDQVLQ*VEVLQAESAGGSFL
Trigger: CAGGAAAGACCCACCGGCGCTCTCTGCCTGGAGCACTTCAACTCACTGCAAGACCTGGTCCCAATGTCCCCTCTGCAGCATTCTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571566.1
CDS GCA 90 bp CCGCTCTGGAAGAAATGGAAGGCATCCGAGGCCTTGGGGTTGACGTaGTTGACCACGGGGAAGATGTTGAGCACGTCCTCCTCGGTGAAC +
Preference number: 5 (lower is better)
Translates to: PLWKKWKASEALGLT*LTTGKMLSTSSSVN
Trigger: GTTCACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTTCCATTTCTTCCAGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574210.5
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGTTGATGGCCATCACGTaGCCGTCAATGACGGCCATG +
Preference number: 5 (lower is better)
Translates to: THSGVTHSGLARAMYRGELMAIT*PSMTAM
Trigger: CATGGCCGTCATTGACGGCAACGTGATGGCCATCAA...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATTGCCAATGATGCCCTaGCACTCGACCGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPLPMMP*HSTEEQ
Trigger: CTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGGTCTTGAAGATGTGCTaGGCCGAGCGGGTGATGAGT +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVVLKMC*AERVMS
Trigger: ACTCATCACCCGCTCGGCCAAGCACATCTTCAAGAC...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGTTGGGGTTGACGTGCTaGACCACGGGGAAGATGTTG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVLGLTC*TTGKML
Trigger: CAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAA...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGACAGCGAAGTTCTTCTaGAAGGTCGGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVTAKFF*KVGLIW
Trigger: CCAGATCAGCCCGACCTTCAAGAAGAACTTCGCTGT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp ACCCACTCAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGACAGCGAAGTTCTTCTaGAAGGTCGGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: THSGVTHSGLARAMYRGETAKFF*KVGLIW
Trigger: CCAGATCAGCCCGACCTTCAAGAAGAACTTCGCTGT...CTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTGAGTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTACAGCGAAGTTCTTCTaGAAGGTCGGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGTAKFF*KVGLIW
Trigger: CCAGATCAGCCCGACCTTCAAGAAGAACTTCGCTGT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCATTGATGGCCATCACGTaGCCGTCAATGACGGCCATG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPLMAIT*PSMTAM
Trigger: CATGGCCGTCATTGACGGCAACGTGATGGCCATCAA...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAGTCTTGAAGATGTGCTaGGCCGAGCGGGTGATGAGT +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPVLKMC*AERVMS
Trigger: ACTCATCACCCGCTCGGCCAAGCACATCTTCAAGAC...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCATTCTCCAGGTCTTTTaGGCTGAGAGGAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCILQVF*AERNEE
Trigger: CTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAAT...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAACCCCGACCCCTCCGTTCGGGAGCAGCAGCCAGACCACGCCAGTCACAACGGTGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 5 (lower is better)
Translates to: QPRPLRSGAAARPRQSQRCIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...CCGTTGTGACTGGCGTGGTCTGGCTGCTGCTCCCGAACGGAGGGGTCGGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 90 bp CACTCAGGGAAAGCTGAAAAAGTCACTCCTGCGAGCCTGTGTTCATaGGCCTCCAAGTCGGAGACAGATGAGGGACCAGCACCCTCCACA +
Preference number: 5 (lower is better)
Translates to: HSGKAEKVTPASLCS*ASKSETDEGPAPST
Trigger: TGTGGAGGGTGCTGGTCCCTCATCTGTCTCCGACTTGGAGGCCCATGAACACAGGCTCGCAGGAGTGACTTTTTCAGCTTTCCCTGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575624.1
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCAAAGTCGCTGTGCACCTaGAATATGGCCCTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPKSLCT*NMALSR
Trigger: CCGAGAAAGGGCCATATTCAAGGTGCACAGCGACTT...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTCAACACTCACAGCCACCCTGTAAGTACGTCTaGAAGATGTGCTTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: QDWLGLCTGERNGQHSQPPCKYV*KMCLAE
Trigger: CTCGGCCAAGCACATCTTCAAGACGTACTTACAGGG...TGGCTGTGAGTGTTGACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp GCCAGACCACGCCAGTCACAACGGCGGCTCCCGTCCCGCCCCAAACTAAAGTGCTGCATCATCTATTCATaGAACCAGCGCAAAAACACC +
Preference number: 5 (lower is better)
Translates to: ARPRQSQRRLPSRPKLKCCIIYS*NQRKNT
Trigger: GGTGTTTTTGCGCTGGTTCAATGAATAGATGATGCA...GCACTTTAGTTTGGGGCGGGACGGGAGCCGCCGTTGTGACTGGCGTGGTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 90 bp GCCGCAGAGCGGACGGGTGGCACCTGTAAGTACGTCTTGAAGATGTaGTTGGCCGAGCGGGTGATGAGTTCTCCAATGCCGATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: AAERTGGTCKYVLKM*LAERVMSSPMPILK
Trigger: CTTTAAAATCGGCATTGGAGAACTCATCACCCGCTCGGCCAAGCACATCTTCAAGACGTACTTACAGGTGCCACCCGTCCGCTCTGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS-3UTR CAA 90 bp GGGTTTTTCGGCCTAAACCCTGAACTTTCAGACAGGCTGGGCCCGGGGGTGGTGATTCTCCAGGTCTTTTaGGCTGAGAGGAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: GFFGLNPELSDRLGPGVVILQVF*AERNEE
Trigger: CTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAAT...CACCACCCCCGGGCCCAGCCTGTCTGAAAGTTCAGGGTTTAGGCCGAAAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS-3UTR CAA 90 bp CAGGAGTCACCCACTCAGGACTGGCTCGGGCTATGTACAGGGGAGAGGAACGGTATTCTCCAGGTCTTTTaGGCTGAGAGGAATGAAGAG +
Preference number: 5 (lower is better)
Translates to: QESPTQDWLGLCTGERNGILQVF*AERNEE
Trigger: CTCTTCATTCCTCTCAGCCAAAAAGACCTGGAGAAT...ACCGTTCCTCTCCCCTGTACATAGCCCGAGCCAGTCCTGAGTGGGTGACTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 72 bp TCCGCGCCGCCCGCCGCGCCACTAACCCAAGTGCCCTaGGCGCCGCGGCTGCTGAGGGAAGGACGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: SAPPAAPLTQVP*APRLLREGRSH
Trigger: GTGACTCCGTCCTTCCCTCAGCAGCCGCGGCGCGCAGGGCACTTGGGTTAGTGGCGCGGCGGGCGGCGCGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS GCA 72 bp GCACAGGGGATGCCTGGGAGGCCGCCGCGGAGCAGGTaGCGAAGGGGGCTGTCCCGCAAACGTCGGAGCGAC +
Preference number: 6 (lower is better)
Translates to: AQGMPGRPPRSR*RRGLSRKRRSD
Trigger: GTCGCTCCGACGTTTGCGGGACAGCCCCCTTCGGCACCTGCTCCGCGGCGGCCTCCCAGGCATCCCCTGTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576309.5
CDS GCA 72 bp CTTCACTCCCAGGGCTGCAGCCCTGCGCACAGGGGATaGCTGGGAGGCCGCCGCGGAGCAGGTGCCGAAGGG +
Preference number: 6 (lower is better)
Translates to: LHSQGCSPAHRG*LGGRRGAGAEG
Trigger: CCCTTCGGCACCTGCTCCGCGGCGGCCTCCCAGGCATCCCCTGTGCGCAGGGCTGCAGCCCTGGGAGTGAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576309.5
CDS CAA 72 bp CTGTCGGCCGGGGCGGCCGCCGGCAACTCGTCCGTCTaGATAACCATGGTGGCGGGAGCGGGCGTCCGCCTC +
Preference number: 6 (lower is better)
Translates to: LSAGAAAGNSSV*ITMVAGAGVRL
Trigger: GAGGCGGACGCCCGCTCCCGCCACCATGGTTATCAAGACGGACGAGTTGCCGGCGGCCGCCCCGGCCGACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574426.7
ENST00000651024.2
CDS CCA 72 bp CCACCTCAGGCTCTTTCCCGACGCCCCACACCACCCTaGGAGGCCATGGCCAGCCGCAGAGCGGACGGGTGG +
Preference number: 6 (lower is better)
Translates to: PPQALSRRPTPP*EAMASRRADGW
Trigger: CCACCCGTCCGCTCTGCGGCTGGCCATGGCCTCCCAGGGTGGTGTGGGGCGTCGGGAAAGAGCCTGAGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS CCA 72 bp TCCCGGGCCGGCCTCGTCAAGCCCATTTTCCCTGGGTaGCTCGGCCGCCGCCGCCTCCTTCTTCAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SRAGLVKPIFPG*LGRRRLLLQAL
Trigger: GAGAGCCTGAAGAAGGAGGCGGCGGCGGCCGAGCCACCCAGGGAAAATGGGCTTGACGAGGCCGGCCCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000571566.1
ENST00000574426.7
ENST00000576309.5
ENST00000576885.5
ENST00000651024.2
CDS CCA 72 bp CCCGGCTCCGAGGGTCTGTGCCGTCGTCTGCGGCGATaGTCTCTGCCAGCTCCTTCACCTTGGCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: PGSEGLCRRLRR*SLPAPSPWPGR
Trigger: GCGGCCTGGCCAAGGTGAAGGAGCTGGCAGAGACCATCGCCGCAGACGACGGCACAGACCCTCGGAGCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435359.5
ENST00000570628.6
CDS GCA 72 bp GTAGCGCATGTTGATGCCCCGCTGGCGCATCACCTCTaGCAGCGTTGCCCCGTCCACGGGCAGGACCGCGTG +
Preference number: 6 (lower is better)
Translates to: VAHVDAPLAHHL*QRCPVHGQDRV
Trigger: CACGCGGTCCTGCCCGTGGACGGGGCAACGCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACATGCGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000573641.1
ENST00000574166.1
ENST00000575014.5
ENST00000651024.2
CDS GCA 72 bp TCTGCCAGCGTTGCCCCGTCCACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACCTGCGGGCTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: SASVAPSTGRTA*SMQSFTCGLQQ
Trigger: CTGCTGCAGCCCGCAGGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGTGGACGGGGCAACGCTGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573641.1
ENST00000574166.1
CDS CCA 72 bp GGCTCCGAGGGTCTGCTGTGCCGTCGTCTGCGGCGATaGTCTCTGCCAGCTCCTTCACCTTGGCCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: GSEGLLCRRLRR*SLPAPSPWPGR
Trigger: GCGGCCTGGCCAAGGTGAAGGAGCTGGCAGAGACCATCGCCGCAGACGACGGCACAGCAGACCCTCGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 72 bp CTCTTTCCCGACGCCCCACACCACCCTGGGAGGCCATaGCCAGCCGCAGAGCGGACGGGTGGCACCTGTAAG +
Preference number: 6 (lower is better)
Translates to: LFPDAPHHPGRP*PAAERTGGTCK
Trigger: CTTACAGGTGCCACCCGTCCGCTCTGCGGCTGGCCATGGCCTCCCAGGGTGGTGTGGGGCGTCGGGAAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS TCA 72 bp TCTTCAGGCTCTCTGGGCAGTCCCCGTTTAAGAGCATaGCTGATGGCAGCTCGGCCGCGCCCGGCCGCCCCT +
Preference number: 6 (lower is better)
Translates to: SSGSLGSPRLRA*LMAARPRPAAP
Trigger: AGGGGCGGCCGGGCGCGGCCGAGCTGCCATCAGTCATGCTCTTAAACGGGGACTGCCCAGAGAGCCTGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000435359.5
ENST00000574426.7
ENST00000651024.2
CDS GCA 72 bp AGCTCCACCTCCTCGTCACGGTCGTTGAGCACCTGGTaGCGCAGGATCTTGAGGGGCCGACTCGTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SSTSSSRSLSTW*RRILRGRLVRS
Trigger: GGAGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGAGGTGGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 72 bp TCTGCCAGCGTTGCCCCGTCCACGGGCAGGACCGCGTaGTCCATGCAGTCCTTCACCAAGCCAGGGATCTGG +
Preference number: 6 (lower is better)
Translates to: SASVAPSTGRTA*SMQSFTKPGIW
Trigger: CCAGATCCCTGGCTTGGTGAAGGACTGCATGGAGCACGCGGTCCTGCCCGTGGACGGGGCAACGCTGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000575014.5
ENST00000651024.2
CDS GCA 72 bp CTGATGGCGGCTGAGAGGCCGGAGAGCTCGACTCCCTaGGAGGCAGGTTGGATCCGAGTCATGAGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: LMAAERPESSTP*EAGWIRVMRAL
Trigger: GAGGGCCCTCATGACTCGGATCCAACCTGCCTCGCAGGGAGTCGAGCTCTCCGGCCTCTCAGCCGCCATCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS CCA 72 bp CAGAGCTCCACCTCCTCGTCACGGTCGTTGAGCACCTaGTGCCGCAGGATCTTGAGGGGCCGACTCGTGCGC +
Preference number: 6 (lower is better)
Translates to: QSSTSSSRSLST*CRRILRGRLVR
Trigger: GCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGAGGAGGTGGAGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 72 bp CCGGGGGCCGGTTTTTCCTCCTCTTATTCCGCTTCTTaGAGACCAGCTCGTCGGCGGGCAGGTGGGCCACGG +
Preference number: 6 (lower is better)
Translates to: PGAGFSSSYSAS*RPARRRAGGPR
Trigger: CCGTGGCCCACCTGCCCGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGAGGAGGAAAAACCGGCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574166.1
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 72 bp GAGAGGCCGGAGAGCTCGACTCCCTGCGAGGCAGGTTaGATCCGAGTCATGAGGGCCCTCAGCCCCACCTCA +
Preference number: 6 (lower is better)
Translates to: ERPESSTPCEAG*IRVMRALSPTS
Trigger: TGAGGTGGGGCTGAGGGCCCTCATGACTCGGATCCAACCTGCCTCGCAGGGAGTCGAGCTCTCCGGCCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS CAA 72 bp TCGTCACGGTCGTTGAGCACCTGGTGCCGCAGGATCTaGAGGGGCCGACTCGTGCGCTCCAGCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSRSLSTWCRRI*RGRLVRSSSSR
Trigger: CCTGGAGCTGCTGGAGCGCACGAGTCGGCCCCTCAAGATCCTGCGGCACCAGGTGCTCAACGACCGTGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CAA 72 bp CCCGGGGGCCGGTTTTTCCTCCTCTTATTCCGCTTCTaGGAGACCAGCTCGTCGGCGGGCAGGTGGGCCACG +
Preference number: 6 (lower is better)
Translates to: PGGRFFLLLFRF*ETSSSAGRWAT
Trigger: CGTGGCCCACCTGCCCGCCGACGAGCTGGTCTCCAAGAAGCGGAATAAGAGGAGGAAAAACCGGCCCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574166.1
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS TCA 72 bp GCACCAGCTCCAGCACCTTGCCCAGGTAGCGCATGTTaGTGCCCCGCTGGCGCATCACCTCTGCCAGCGTTG +
Preference number: 6 (lower is better)
Translates to: APAPAPCPGSAC*CPAGASPLPAL
Trigger: CAACGCTGGCAGAGGTGATGCGCCAGCGGGGCATCAACATGCGCTACCTGGGCAAGGTGCTGGAGCTGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000573641.1
ENST00000574166.1
ENST00000575014.5
ENST00000651024.2
CDS TCA 72 bp GCTCGACTCCCTGCGAGGCAGGTTGGATCCGAGTCATaGGGGCCCTCAGCCCCACCTCAGGCTCTTTCCCGA +
Preference number: 6 (lower is better)
Translates to: ARLPARQVGSES*GPSAPPQALSR
Trigger: TCGGGAAAGAGCCTGAGGTGGGGCTGAGGGCCCTCATGACTCGGATCCAACCTGCCTCGCAGGGAGTCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS CCA 72 bp GACCAGCTCGTCGGCGGGCAGGTGGGCCACGGGGTTTaGGTAGGAGCTCAGGAAGCAGTTCAGGAAGTGGCT +
Preference number: 6 (lower is better)
Translates to: DQLVGGQVGHGV*VGAQEAVQEVA
Trigger: AGCCACTTCCTGAACTGCTTCCTGAGCTCCTACCCAAACCCCGTGGCCCACCTGCCCGCCGACGAGCTGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574166.1
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 72 bp TTGGAGGCCACGGTGTTGGGGGAGCACCCAGCATCCTaGAACCAGACACAGAGCCTGCGGGAGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LEATVLGEHPAS*NQTQSLREEEE
Trigger: CTCCTCCTCCTCCCGCAGGCTCTGTGTCTGGTTCCAGGATGCTGGGTGCTCCCCCAACACCGTGGCCTCCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575624.1
CDS CCA 72 bp CCAGCCCCGTGTCCTGAGGCTTGGAGGCCACGGTGTTaGGGGAGCACCCAGCATCCTGGAACCAGACACAGA +
Preference number: 6 (lower is better)
Translates to: PAPCPEAWRPRC*GSTQHPGTRHR
Trigger: TCTGTGTCTGGTTCCAGGATGCTGGGTGCTCCCCCAACACCGTGGCCTCCAAGCCTCAGGACACGGGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575624.1
CDS CCA 72 bp GTCCTTCTGGGGGAGCACAGCTATCCTGGGAGGCCCTaGAGAAGGACCCCGAAGGCTCCAGCTCCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: VLLGEHSYPGRP*RRTPKAPAPSQ
Trigger: CTGACTGGGAGCTGGAGCCTTCGGGGTCCTTCTCCAGGGCCTCCCAGGATAGCTGTGCTCCCCCAGAAGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573641.1
CDS CAA 90 bp GCATCCGAGGCCTTGGGGTTGACGTGCTTGACCACGGGGAAGATGTaGAGCACGTCCTCCTCGGTGAACGCGGGCTTGTGGCGACTGTCG +
Preference number: 6 (lower is better)
Translates to: ASEALGLTCLTTGKM*STSSSVNAGLWRLS
Trigger: CGACAGTCGCCACAAGCCCGCGTTCACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574210.5
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS TCA 72 bp GCAGGTCGAGGATGTAGTGGCGCCCGTCGTTGCCAATaGTGCCCTTGCACTCGACCGAGGAGCAGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: AGRGCSGARRCQ*CPCTRPRSRAP
Trigger: TGGAGCTCTGCTCCTCGGTCGAGTGCAAGGGCATCATTGGCAACGACGGGCGCCACTACATCCTCGACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS TCA 72 bp TCTTCAGGCTCTCTGGGCAGTCCCCGTTTAAGAGCATaGCTGATGGCAGCTCCAAGTGCCCTGCGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: SSGSLGSPRLRA*LMAAPSALRAA
Trigger: CGCGGCGCGCAGGGCACTTGGAGCTGCCATCAGTCATGCTCTTAAACGGGGACTGCCCAGAGAGCCTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576885.5
CDS GCA 72 bp AGGGAGGAGGGGGTCTCCAGCTGGCTGGCGTTCTGCTaGATCAGCTGCAAGGCGGCCAGCTTCATAAAGAGG +
Preference number: 6 (lower is better)
Translates to: REEGVSSWLAFC*ISCKAASFIKR
Trigger: CCTCTTTATGAAGCTGGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCTGGAGACCCCCTCCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 72 bp TCCAGGGAGGAGGGGGTCTCCAGCTGGCTGGCGTTCTaGTGCATCAGCTGCAAGGCGGCCAGCTTCATAAAG +
Preference number: 6 (lower is better)
Translates to: SREEGVSSWLAF*CISCKAASFIK
Trigger: CTTTATGAAGCTGGCCGCCTTGCAGCTGATGCAGCAGAACGCCAGCCAGCTGGAGACCCCCTCCTCCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS GCA 72 bp CAGCCCTCCTTCAGGAAGCCCTGCTGCACTTTGGCCTaGCCGCTCTGGAAGAAATGGAAGGCATCCGAGGCC +
Preference number: 6 (lower is better)
Translates to: QPSFRKPCCTLA*PLWKKWKASEA
Trigger: GGCCTCGGATGCCTTCCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGCTTCCTGAAGGAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CCA 72 bp GGCCACACACCCTGCTGCACTTTGGCCTGCCCGCTCTaGAAGAAATGGAAGGCATCCGAGGCCTTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: GHTPCCTLACPL*KKWKASEALGL
Trigger: CAACCCCAAGGCCTCGGATGCCTTCCATTTCTTCCAGAGCGGGCAGGCCAAAGTGCAGCAGGGTGTGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574210.5
CDS CAA 72 bp GCCTTGGGGTTGACGTGCTTGACCACGGGGAAGATGTaGAGCACGTCCTCCTCGGTGAACGCGGGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: ALGLTCLTTGKM*STSSSVNAGLW
Trigger: CCACAAGCCCGCGTTCACCGAGGAGGACGTGCTCAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574210.5
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CAA 90 bp GCCTGCCCGCTCTGGAAGAAATGGAAGGCATCCGAGGCCTTGGGGTaGACGTGCTTGACCACGGGGAAGATGTTGAGCACGTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ACPLWKKWKASEALG*TCLTTGKMLSTSSS
Trigger: CGAGGAGGACGTGCTCAACATCTTCCCCGTGGTCAAGCACGTCAACCCCAAGGCCTCGGATGCCTTCCATTTCTTCCAGAGCGGGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000435359.5
ENST00000570628.6
ENST00000574210.5
ENST00000574426.7
ENST00000575014.5
ENST00000651024.2
CDS CAA 90 bp CCATGGCCAGCCGCAGAGCGGACGGGTGGCACCTGTAAGTACGTCTaGAAGATGTGCTTGGCCGAGCGGGTGATGAGTTCTCCAATGCCG +
Preference number: 6 (lower is better)
Translates to: PWPAAERTGGTCKYV*KMCLAERVMSSPMP
Trigger: CGGCATTGGAGAACTCATCACCCGCTCGGCCAAGCACATCTTCAAGACGTACTTACAGGTGCCACCCGTCCGCTCTGCGGCTGGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer s