RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLTCL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070371

Ensembl transcript IDs: ENST00000412649.5, ENST00000427926.6, ENST00000449918.1, ENST00000458188.2, ENST00000538828.1, ENST00000540896.1, ENST00000611723.1, ENST00000615606.4, ENST00000617103.4, ENST00000617926.4, ENST00000621271.4, ENST00000622493.4

Found 1103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAGGAGGAAGGCCTaGCTCCAGCAGGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTA +
Preference number: 1 (lower is better)
Translates to: GGGSSSQSEAPRRKA*LQQEGPQSSLCCRL
Trigger: TAGCCGACAACAGAGACTGGACTGTGGGCCCTCCTGCTGGAGCCAGGCCTTCCTCCTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR CCA 90 bp GGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGGCAGGGCTTAGTGCAATCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: GGWRSWEQRHIHRGS*QGLGPRQGLVQSAG
Trigger: CCCAGCTGATTGCACTAAGCCCTGCCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR CCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTaGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGG +
Preference number: 1 (lower is better)
Translates to: LCCRLKLVLRRQPLP*PPQALGWLRGCRHW
Trigger: CCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR TCA 90 bp GCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGGAGACCCCTaGGGACGCCCAGTGCCCACATCTGCATGGACCCGATGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: AACCMASSEFRLGDP*GRPVPTSAWTRCAE
Trigger: CTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR GCA 90 bp TGGCATCCTCTGAGTTCCGTTTGGGAGACCCCTGAGGACGCCCAGTaGCCACATCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAA +
Preference number: 1 (lower is better)
Translates to: WHPLSSVWETPEDAQ*PHLHGPDVLSWLRK
Trigger: TTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR CCA 90 bp CGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTaGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAGGAGGAAGGC +
Preference number: 1 (lower is better)
Translates to: RYLQTRRVHVVFKLA*RGQLQPVGGAQEEG
Trigger: GCCTTCCTCCTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR GCA 90 bp AGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: RQAAKHSLLPSSRNH*SNFWASSASRDSAA
Trigger: TGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
3UTR CCA 90 bp AACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTaGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGC +
Preference number: 1 (lower is better)
Translates to: NAHYTRKLYIGGWRS*EQRHIHRGSWQGLG
Trigger: GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR GCA 90 bp GGTGTCCCTGCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATaGTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTG +
Preference number: 1 (lower is better)
Translates to: GVPASHCVPCAAGVT*SLEKLVTLQVGWVV
Trigger: CACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGCAGGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR TCA 90 bp AGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTCATAGCAGGTaGAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGA +
Preference number: 1 (lower is better)
Translates to: RPAQAPCLGEAGHSR*RDKLRSTPSCLPPG
Trigger: TCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR CCA 90 bp GGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTaGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: GGDNAHYTRKLYIGG*RSWEQRHIHRGSWQ
Trigger: CTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR CCA 90 bp CTGGTCTGTGAGCTTGGCCTCCTTCAGGAAGTTCTTCACACGCTCTaGGTTGTAGCAGCTGCTCTCTCGGCATATCCTCTCCACCTCCTT +
Preference number: 1 (lower is better)
Translates to: LVCELGLLQEVLHTL*VVAAALSAYPLHLL
Trigger: AAGGAGGTGGAGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAGAGCGTGTGAAGAACTTCCTGAAGGAGGCCAAGCTCACAGACCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR TCA 90 bp ATGCCCTTAAGCCCTGATAGTCCTCCTCCTCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACC +
Preference number: 1 (lower is better)
Translates to: MPLSPDSPPPLSAGG*VPHSHSCCCGSGLT
Trigger: GGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAGGAGGAGGACTATCAGGGCTTAAGGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR CCA 90 bp GGAGTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAG +
Preference number: 1 (lower is better)
Translates to: GVTCSLEKLVTLQVG*VVTTPTTRGSCTLE
Trigger: CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR TCA 90 bp CTGGGTTGTAGCAGCTGCTCTCTCGGCATATCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGGCAGCCTGAATGTATTTCAGATGCA +
Preference number: 1 (lower is better)
Translates to: LGCSSCSLGISSPPP*SALSYRQPECISDA
Trigger: TGCATCTGAAATACATTCAGGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR CCA 90 bp GTTGACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAGGATGGCCAGCTCAGTGAACATGCC +
Preference number: 1 (lower is better)
Translates to: VDTGPEKLQMLQHLL*LEFGVEDGQLSEHA
Trigger: GGCATGTTCACTGAGCTGGCCATCCTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR TCA 90 bp CCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTATaGGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAA +
Preference number: 1 (lower is better)
Translates to: PTLIFMIAKRLRVLL*GPVPPNKTCSCSLQ
Trigger: TTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR CAA 90 bp CAGGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTaGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTCTGGGATGG +
Preference number: 2 (lower is better)
Translates to: QEGPQSSLCCRLKLV*RRQPLPWPPQALGW
Trigger: CCATCCCAGAGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR CAA 90 bp GAGGAAGGCCTGGCTCCAGCAGGAGGGCCCACAGTCCAGTCTCTGTaGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCC +
Preference number: 2 (lower is better)
Translates to: EEGLAPAGGPTVQSL*SAKAGLAPSASTLA
Trigger: GGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCCTGCTGGAGCCAGGCCTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRIHRGS*QGLGPR
Trigger: CCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGAT...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWIHRGS*QGLGPR
Trigger: CCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGAT...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTIHRGS*QGLGPR
Trigger: CCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGAT...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAGGCCTCCCCAGGCTCTaGGATGGCTCAGAGGTTGCC +
Preference number: 2 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLGLPRL*DGSEVA
Trigger: GGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR GCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACCATTGCGTCCCCTGTaGTGCTGGAGTGACATGCTC +
Preference number: 2 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQPLRPL*CWSDML
Trigger: GAGCATGTCACTCCAGCAGCACAGGGGACGCAATGG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR TCA 90 bp CCACGAGGTTGTGCCTCCAGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTATGATGTCCTTGAACTaGCCCTCCTTCCAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PRGCASRPAQAPCLGEAGMMSLN*PSFQAS
Trigger: TGAGGCCTGGAAGGAGGGTCAGTTCAAGGACATCAT...ACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCTGGAGGCACAACCTCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR CCA 90 bp GCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGGACCCGATGTGCTGAGCTaGCTCCGGAAAGAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: ASRDSAACCMASSEFRLGPDVLS*LRKEVS
Trigger: GGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGG...TCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR CAA 90 bp CCTGCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTaGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACG +
Preference number: 2 (lower is better)
Translates to: PASHCVPCAAGVTCS*EKLVTLQVGWVVTT
Trigger: CGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR TCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGGGATGGCCAGCTCAGTaGACATGCCCATGTGGGCCC +
Preference number: 2 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLGWPAQ*TCPCGP
Trigger: GGGCCCACATGGGCATGTTCACTGAGCTGGCCATCC...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR GCA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGATTGCGTCCCCTGTGCTaGTGGAGTGACATGCTCCTT +
Preference number: 2 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGLRPLC*WSDMLL
Trigger: AAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAA...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR GCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCCTCAGCCCACAGGTGTaGCTGCTCTGCAGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRLSPQV*LLCSPQ
Trigger: CTGAGGGCTGCAGAGCAGGCACACCTGTGGGCTGAG...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR CCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACT +
Preference number: 2 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLTLQVG*VVTTPT
Trigger: AGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACGTCCCCTGTGCTGCTaGAGTGACATGCTCCTTGGA +
Preference number: 2 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLRPLCC*SDMLLG
Trigger: TCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACG...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR CAA 90 bp GTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAA +
Preference number: 2 (lower is better)
Translates to: VGWVVTTPTTRGSCT*EAGEVGSRGISIGE
Trigger: TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR CAA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTaGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAT +
Preference number: 2 (lower is better)
Translates to: SAGRVGGDNAHYTRK*YIGGWRSWEQRHIH
Trigger: ATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR TCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGATGGACCCGATGTGCTaGGCTGGCTCCGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: VIAGEETSCEALPLAFLQMDPMC*AGSGKK
Trigger: CTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCAT...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR-3UTR TCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCT +
Preference number: 2 (lower is better)
Translates to: EGQALSHAPLACADSPRHLSAGG*VPHSHS
Trigger: AGAGTGTGAATGAGGCACTCAACCACCTGCTGACAG...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR TCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGTTCACCAGGGGCAGCTaGCCTGCCTTTGAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPFTRGS*PAFEKK
Trigger: TTTCTTTTCAAAGGCAGGTCAGCTGCCCCTGGTGAA...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR GCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCAGCATCCCGCGACTCTaGAGCATGCTGCATGGCATC +
Preference number: 2 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRSIPRL*SMLHGI
Trigger: GATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCT...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR CCA 90 bp AGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTATGATGAGGGGAAGCTaGTCTGTGAGCTTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RTIHIKQPSNHSWGPARVMMRGS*SVSLAS
Trigger: GGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCAT...AACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR CCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGAGCCCTCAGCACCTTTaGGATGTTGACACGGGACCA +
Preference number: 2 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGSPQHL*DVDTGP
Trigger: TGGTCCCGTGTCAACATCCCAAAGGTGCTGAGGGCT...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR TCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATCAGCTGACCTGCCTTTaGAAAGAAACTGACTGTCCA +
Preference number: 2 (lower is better)
Translates to: EGQALSHAPLACADSPRHQLTCL*KETDCP
Trigger: TGGACAGTCAGTTTCTTTTCAAAGGCAGGTCAGCTG...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR TCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGCAGGTCATAGCAGGTaGAGAGACAAGCTGCGAAGC +
Preference number: 2 (lower is better)
Translates to: LCQQVVECLIHTLVVVALAGHSR*RDKLRS
Trigger: GCTTCGCAGCTTGTCTCTTCACCTGCTATGACCTGC...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR GCA 90 bp TCACTTCCTCAGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCCTGGGTTGTAGCAGCTaGTCTCTCGGCATATCCTCT +
Preference number: 2 (lower is better)
Translates to: SLPQNNPHQAALQSQLGSLGCSS*SLGISS
Trigger: AGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAG...GGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCTGAGGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR TCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGGCATCTTCTGTGGCTTaGATTTGGAGTAGAGGATGG +
Preference number: 2 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGASSVA*IWSRGW
Trigger: CCATCCTCTACTCCAAATTCAAGCCACAGAAGATGC...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR GCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAATTGTCCAGGTGTCCCTaGCTCCCATTGCGTCCCCTG +
Preference number: 2 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQLSRCP*LPLRPL
Trigger: CAGGGGACGCAATGGGAGGCAGGGACACCTGGACAA...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAGCGGAAGTTGTACATTaGAGGCTGGCGAAGTTGGGA +
Preference number: 2 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTAEVVH*RLAKLG
Trigger: TCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGC...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR TCA 90 bp AGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGTCTTACAGGCAGCCTaGATGTATTTCAGATGCACA +
Preference number: 2 (lower is better)
Translates to: RTIHIKQPSNHSWGPARVVLQAA*MYFRCT
Trigger: TGTGCATCTGAAATACATTCAGGCTGCCTGTAAGAC...AACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR GCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGCAGAAAAGCTCCAGATaGTCCAGCATCTTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LCQQVVECLIHTLVVVALQKSSR*SSIFCG
Trigger: GCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTG...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR TCA 90 bp TCAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAAGGTCATGGACAGGGGAAGCTGGTCTGTaGGCTTGGCCTCCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: SMYLCRLLRYKYRTRSWTGEAGL*AWPPSG
Trigger: TCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCC...TGTCCATGACCTTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR GCA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCGGATGGCTCAGAGGTTaGCGTCATTGGGTTTCAGCA +
Preference number: 2 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLAGWLRG*RHWVSA
Trigger: TGCTGAAACCCAATGACGGCAACCTCTGAGCCATCC...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAAGCGGAAGTTGTACATTaGAGGCTGGCGAAGTTGGGA +
Preference number: 2 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQAEVVH*RLAKLG
Trigger: TCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGC...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR TCA 90 bp CAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAAGGTCATGGACAATCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGG +
Preference number: 2 (lower is better)
Translates to: QCTSAGCCGINIGQGHGQSSPPP*SALSYR
Trigger: CCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGA...TTGTCCATGACCTTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR GCA 90 bp GTAGAGAACTGTCCTCTCACTGCCATGATTAAGTGTTTAATCACTTCCTCAGAATCCACCTCCTTGATCTaGCCTGTCTTACAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: VENCPLTAMIKCLITSSESTSLI*PVLQAA
Trigger: GGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGA...TTCTGAGGAAGTGATTAAACACTTAATCATGGCAGTGAGAGGACAGTTCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR GCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTAGCTGCTGGAGTGACATaGTCCTTGGAGAAGTTAGTA +
Preference number: 2 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLAAGVT*SLEKLV
Trigger: TACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGC...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR TCA 72 bp ACGCCCAGTGCCCACATCTGCATGGACCCGATGTGCTaGGCTGGCTCCGGAAAGAAGTCTCCCCCGCTGGCA +
Preference number: 3 (lower is better)
Translates to: TPSAHICMDPMC*AGSGKKSPPLA
Trigger: TGCCAGCGGGGGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR GCA 72 bp CTGAGTTCCGTTTGGGAGACCCCTGAGGACGCCCAGTaGCCACATCTGCATGGACCCGATGTGCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: LSSVWETPEDAQ*PHLHGPDVLSW
Trigger: CCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR GCA 72 bp GCGAAGCACTCCCTCTTGCCTTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGCTCAGCATCCCGCGAC +
Preference number: 3 (lower is better)
Translates to: AKHSLLPSSRNH*SNFWASSASRD
Trigger: GTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
3UTR CCA 72 bp CAGTGCCCACATCTGCATGGACCCGATGTGCTGAGCTaGCTCCGGAAAGAAGTCTCCCCCGCTGGCATGCTG +
Preference number: 3 (lower is better)
Translates to: QCPHLHGPDVLS*LRKEVSPAGML
Trigger: CAGCATGCCAGCGGGGGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR TCA 72 bp TGCATGGCATCCTCTGAGTTCCGTTTGGGAGACCCCTaGGGACGCCCAGTGCCCACATCTGCATGGACCCGA +
Preference number: 3 (lower is better)
Translates to: CMASSEFRLGDP*GRPVPTSAWTR
Trigger: TCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGATGCCATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR GCA 72 bp TTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATaGTGCATGGCATCCTCTGAGTTCCGTTTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: FWASSASRDSAA*CMASSEFRLGD
Trigger: GTCTCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR CCA 72 bp CAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTaGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: QTRRVHVVFKLA*RGQLQPVGGAQ
Trigger: CTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CAA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCACGGCTAAAGCTGGTCTaGCGCCGTCAGCCTCTACCC +
Preference number: 3 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPRLKLV*RRQPLP
Trigger: GGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCG...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CAA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGGCGAAGCACTCCCTCTaGCCTTCCTCCAGGAACCAC +
Preference number: 3 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGAKHSL*PSSRNH
Trigger: GTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR TCA 72 bp TGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTaGCCGCAGGTAAGGCTTCACCAGGGGCAGCTGACC +
Preference number: 3 (lower is better)
Translates to: CLIHTLVVVALD*PQVRLHQGQLT
Trigger: GGTCAGCTGCCCCTGGTGAAGCCTTACCTGCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR GCA 72 bp TTGTCCAGGTGTCCCTGCCTCCCATTGCGTCCCCTGTaGTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGT +
Preference number: 3 (lower is better)
Translates to: LSRCPCLPLRPL*CWSDMLLGEVS
Trigger: ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGCAGGGACACCTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR TCA 72 bp AAAGAAACTGACTGTCCAGGTGTGGTCCAGCCGGGGTaGAAGCACCAGCAGCAGGTCATTGATGAGCAGTGG +
Preference number: 3 (lower is better)
Translates to: KETDCPGVVQPG*KHQQQVIDEQW
Trigger: CCACTGCTCATCAATGACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCACACCTGGACAGTCAGTTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR TCA 72 bp CAAGCACCATGTCTGGGCGAAGCAGGTCATAGCAGGTaGAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: QAPCLGEAGHSR*RDKLRSTPSCL
Trigger: AAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGACCTGCTTCGCCCAGACATGGTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR CCA 72 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTaGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: YTRKLYIGGWRS*EQRHIHRGSWQ
Trigger: CTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR CCA 72 bp AGGTGTCCCTGCCTCCCATTGCGTCCCCTGTGCTGCTaGAGTGACATGCTCCTTGGAGAAGTTAGTAACTCT +
Preference number: 3 (lower is better)
Translates to: RCPCLPLRPLCC*SDMLLGEVSNS
Trigger: AGAGTTACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGCAGGGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CAA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCACACTACACGCGGAAGTaGTACATTGGAGGCTGGCGA +
Preference number: 3 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPHYTRK*YIGGWR
Trigger: TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR-3UTR CAA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGAGGTTGCCGTCATaGGGTTTCAGCAAAAATAAA +
Preference number: 3 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPQRLPS*GFSKNK
Trigger: TTTATTTTTGCTGAAACCCAATGACGGCAACCTCTG...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR GCA 72 bp CATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTaGAGAGCTCCACGCTCTGGGCCCACCAGTTATTGC +
Preference number: 3 (lower is better)
Translates to: HAAWHPCRDDPS*RAPRSGPTSYC
Trigger: GCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR CCA 72 bp TGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACTACACGCGGAAGTTGT +
Preference number: 3 (lower is better)
Translates to: CSLEKLVTLQVG*VVTTPTTRGSC
Trigger: ACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
3UTR CCA 72 bp AGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTaGGGTCCGGCTAGGGTTGACCTTCTGCACGTAGAT +
Preference number: 3 (lower is better)
Translates to: RTIHIKQPSNHS*GPARVDLLHVD
Trigger: ATCTACGTGCAGAAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR-3UTR CAA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCAGCACCTTTGGGATGTaGACACGGGACCAGAAAAGC +
Preference number: 3 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRSTFGM*TRDQKS
Trigger: GCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGCT...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR TCA 72 bp AGCAGCTGCTCTCTCGGCATATCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGGCAGCCTGAATGTATT +
Preference number: 3 (lower is better)
Translates to: SSCSLGISSPPP*SALSYRQPECI
Trigger: AATACATTCAGGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGATATGCCGAGAGAGCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
3UTR TCA 72 bp AGCCCTGATAGTCCTCCTCCTCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCTTGTTGTTGTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SPDSPPPLSAGG*VPHSHSCCCGS
Trigger: AGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAGGAGGAGGACTATCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR CCA 72 bp GGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAGGATGGCCAGCTCAGT +
Preference number: 3 (lower is better)
Translates to: GPEKLQMLQHLL*LEFGVEDGQLS
Trigger: ACTGAGCTGGCCATCCTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
3UTR-3UTR CAA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTACGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLRGSCT*EAGEVG
Trigger: CCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCG...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR TCA 72 bp ATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTATaGGGTCCGGTACCTCCAAACAAGACGTGTTCATGT +
Preference number: 3 (lower is better)
Translates to: IFMIAKRLRVLL*GPVPPNKTCSC
Trigger: ACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCCCACCAGGGCCTGCGTaGCCAGCTGCTCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFPPGPA*PAARGT
Trigger: AGTACCACGAGCAGCTGGGCACGCAGGCCCTGGTGG...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCCTCAGCCCACAGGTGTaGCTGCTCTGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFLSPQV*LLCSPQ
Trigger: CTGAGGGCTGCAGAGCAGGCACACCTGTGGGCTGAG...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGATCTGCGCCATGGCTaGTGCGGGACCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQDLRHG*CGTSAA
Trigger: CGCCGCCGAGGTCCCGCACCAGCCATGGCGCAGATC...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCCCCTCCAATCACAGCTaGGGTCCGGCTAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFPSNHS*GPARVD
Trigger: GTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGG...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTACGGCAGCGGCAGGAATaGACGCCGACCCCTCGCGCG +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLRQRQE*TPTPRA
Trigger: CGCGCGAGGGGTCGGCGTTCATTCCTGCCGCTGCCG...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427926.6
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCATGATGAGGGGAAGCTaGTCTGTGAGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFMMRGS*SVSLAS
Trigger: GGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCAT...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCCGGTCTCCAACCTGCTaGATGTGGGCATTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFRSPTC*MWALLG
Trigger: ACCCAACAATGCCCACATCCAGCAGGTTGGAGACCG...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCCGTTTGGGAGACCCCTaGGGACGCCCAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: NFWASSASRDSAACCMASRLGDP*GRPVPT
Trigger: TGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACG...GGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR TCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCGGATGGCCAGCTCAGTaGACATGCCCATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGGWPAQ*TCPCGP
Trigger: GGGCCCACATGGGCATGTTCACTGAGCTGGCCATCC...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCCCCCGCTGGCATGCTaGTCATCGATCGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPPPLAC*SSIAAS
Trigger: GGAGGCAGCGATCGATGAGCAGCATGCCAGCGGGGG...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp TCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGTCTCCCCCGCTGGCATaGTGCTCATCGATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SGPAQHPATLQHAAWHPLSPPLA*CSSIAA
Trigger: GGCAGCGATCGATGAGCAGCATGCCAGCGGGGGAGA...CAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp TCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAGGAGGTTGCGTCCCCTGTGCTaGTGGAGTGACATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSNWPGGGSSSQSEAPRRLRPLC*WSDMLL
Trigger: AAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAA...CCTCCTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCGCCTGCGTGCCCAGCTaGTCGTGGTACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGACVPS*SWYLEA
Trigger: GGCCTCTAAGTACCACGAGCAGCTGGGCACGCAGGC...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAGATCTGCGCCATGGCTaGTGCGGGACCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEADLRHG*CGTSAA
Trigger: CGCCGCCGAGGTCCCGCACCAGCCATGGCGCAGATC...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCGTTCTTCACACGCTCTaGGTTGTAGCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFVLHTL*VVAAAL
Trigger: GAGAGCAGCTGCTACAACCCAGAGCGTGTGAAGAAC...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCACACTCTTGTTGTTGTaGCTCTGGACTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFTLLLL*LWTDRR
Trigger: CCTGCGGTCAGTCCAGAGCCACAACAACAAGAGTGT...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCGGGGAAGCTGGTCTGTaGGCTTGGCCTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVAGEAGL*AWPPSG
Trigger: TCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCC...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCACTTGTGGAAAACGGTaGAGGCCTCCTCATACAGTG +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFTCGKR*RPPHTV
Trigger: CACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGT...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAGGATGGCCAGCTCAGTaGACATGCCCATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAGWPAQ*TCPCGP
Trigger: GGGCCCACATGGGCATGTTCACTGAGCTGGCCATCC...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGGTGGTCCAGCCGGGGTaGAAGCACCAGCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPVVQPG*KHQQQV
Trigger: GACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCAC...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCCCCCATAGCAGCAAGTaGGCAGCAGGCAAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGPHSSK*AAGKRV
Trigger: CACTCGCTTGCCTGCTGCTCACTTGCTGCTATGGGG...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617926.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCTTGCTGCAGGAGGCCTaGCTTCTCACAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGLLQEA*LLTELG
Trigger: GCCCAGCTCTGTGAGAAGGCAGGCCTCCTGCAGCAA...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGGTGTAGTGCTCCAGTaGTTGCTGCAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWGVVLQ*LLQEAC
Trigger: GCAGGCCTCCTGCAGCAAGCACTGGAGCACTACACC...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCGGTGTAGTGCTCCAGTaGTTGCTGCAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGGVVLQ*LLQEAC
Trigger: GCAGGCCTCCTGCAGCAAGCACTGGAGCACTACACC...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCCCAGTTTGTCCACCTTaGTCAGGTACTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFPVCPP*SGTPSS
Trigger: TGATGAGGGAGTACCTGAGCAAGGTGGACAAACTGG...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGGAGGATCTGCGCCATaGCTGGTGCGGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLEGGSAP*LVRDLG
Trigger: GCCGAGGTCCCGCACCAGCCATGGCGCAGATCCTCC...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCACGCAGACCAAGGTCTaGATTCTGAAGCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFTQTKV*ILKHVG
Trigger: ACCAACGTGCTTCAGAATCCAGACCTTGGTCTGCGT...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CCACGAGGTTGTGCCTCCAGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTGTGCCCAGCTGCTCGTaGTACTTAGAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: PRGCASRPAQAPCLGEAGVPSCS*YLEATC
Trigger: GCAGGTGGCCTCTAAGTACCACGAGCAGCTGGGCAC...ACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCTGGAGGCACAACCTCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCCCCTCCAATCACAGCTaGGGTCCGGCTAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGPSNHS*GPARVD
Trigger: GTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGG...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCCTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGLTVQV*SSRGES
Trigger: GCTTTCACCCCGGCTGGACCACACCTGGACAGTCAG...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPLTVQV*SSRGES
Trigger: GCTTTCACCCCGGCTGGACCACACCTGGACAGTCAG...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGCAGAGCTCCACGCTCTaGGCCCACCAGTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: SGPAQHPATLQHAAWHPLQSSTL*AHQLLP
Trigger: GGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTG...CAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR CAA 72 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTaGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLV*RRQPLPWPPQA
Trigger: AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR CAA 72 bp CTGGCTCCAGCAGGAGGGCCCACAGTCCAGTCTCTGTaGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LAPAGGPTVQSL*SAKAGLAPSAS
Trigger: AGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCCTGCTGGAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCTCAAGTTTATTGAGCTaGCCCTGGTCGAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFSSLLS*PWSSRI
Trigger: AATCCTGCTCGACCAGGGTCAGCTCAATAAACTTGA...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCGTGGTCCAGCCGGGGTaGAAGCACCAGCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGVVQPG*KHQQQV
Trigger: GACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCAC...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGAGCATCCCGCGACTCTaGAGCATGCTGCATGGCATC +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQSIPRL*SMLHGI
Trigger: GATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCT...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAAGAAGTCTCCCCCGCTGGTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SAWTRCAELAPERSLPRWSSRNH*SNFWAS
Trigger: GCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGA...CCAGCGGGGGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQSSRNH*SNFWAS
Trigger: GCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGA...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCAAGTCCACGAGGTTGTaGCTCCAGGCCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGKSTRL*LQASSS
Trigger: GCTTGAGCTGGCCTGGAGGCACAACCTCGTGGACTT...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATCGAACAGGGAGGATCTaGGCCATGGCTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHRTGRI*AMAGAG
Trigger: TCCCGCACCAGCCATGGCGCAGATCCTCCCTGTTCG...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGTGCTCCAGTGCTTGCTaGAGGAGGCCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWCSSAC*RRPAFS
Trigger: TGAGAAGGCAGGCCTCCTGCAGCAAGCACTGGAGCA...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCGGCTGTTGTCCACTaGTGCCTGATACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWAAVVH*CLILTE
Trigger: CTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGC...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGATCCACGTCCGGGTGCTaGTGGCCTTGCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRSTSGC*WPCGCC
Trigger: ACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGA...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGCCTTCCACGTCCGGGTaGTGCTGGCCTTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLPSTSG*CWPCGC
Trigger: ACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGG...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGACCTTCCACGTCCGGGTaGTGCTGGCCTTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGPSTSG*CWPCGC
Trigger: ACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGG...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGCCTTCCACGTCCGGGTaGTGCTGGCCTTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLEPSTSG*CWPCGC
Trigger: ACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGG...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCTCAGCCCACAGGTGTaGCTGCTCTGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWLSPQV*LLCSPQ
Trigger: CTGAGGGCTGCAGAGCAGGCACACCTGTGGGCTGAG...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACT +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQTLQVG*VVTTPT
Trigger: AGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAAGTCTTCAAACTGGCCTaGAGGGGGCAGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQVFKLA*RGQLQP
Trigger: TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGAC...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAGGAGGACGCAGGATTCCCTTTaGTGCAGACGCTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: SSNWPGGGSSSQSEAPRRTQDSL*CRRCNF
Trigger: AAAGTTGCAGCGTCTGCACCAAAGGGAATCCTGCGT...CCTCCTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCCGAGGTGAACCAAGGTaGAAGCCAGGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVARGEPR*KPGGQS
Trigger: ACTTTGCCCGCCTGGCTTCCACCTTGGTTCACCTCG...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCCAGGCCTCAGTGGGGTaGCTCATCATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGQASVG*LIMVST
Trigger: TGTGCTCACCATGATGAGCCACCCCACTGAGGCCTG...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACAGAGCTCCACGCTCTaGGCCCACCAGTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQQSSTL*AHQLLP
Trigger: GGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427926.6
CDS-3UTR CCA 90 bp AACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCCAGAGCTCCACGCTCTaGGCCCACCAGTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: NFWASSASRDSAACCMASQSSTL*AHQLLP
Trigger: GGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTG...GGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
CDS-3UTR TCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGCCTGTGCTGCTGGAGTaGCATGCTCCTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQPVLLE*HAPWRS
Trigger: ACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGG...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGCCTGTGCTGCTGGAGTaGCATGCTCCTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWPVLLE*HAPWRS
Trigger: ACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGG...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGTCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWSSPPP*SALSYR
Trigger: CCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGA...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCGGGGAAGCTGGTCTGTaGGCTTGGCCTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QSTSSSPPITAGVRLGLTGEAGL*AWPPSG
Trigger: TCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCC...GGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTTCCTCACAGCCTTCCTaGATCTGGGACTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPSSQPS*IWDSSQ
Trigger: CTGGCTGGAGTCCCAGATTCAGGAAGGCTGTGAGGA...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGTCTCCTCAAGGACGTaGGCCCAGAGCTCCGGATCC +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLVSSRT*AQSSGS
Trigger: GGATCCGGAGCTCTGGGCTCACGTCCTTGAGGAGAC...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATGTGGTCCAGCCGGGGTaGAAGCACCAGCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHVVQPG*KHQQQV
Trigger: GACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCAC...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGTGCTTCTCCAGCTGCTaGGCCAGGCTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWCFSSC*ARLMLS
Trigger: TGACAACATCAGCCTGGCTCAGCAGCTGGAGAAGCA...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCAGGCCGCAATGCACCTaGACTCCATCAGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGRPQCT*TPSADA
Trigger: AGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCT...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCCCCATAGCAGCAAGTaGGCAGCAGGCAAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWPHSSK*AAGKRV
Trigger: CACTCGCTTGCCTGCTGCTCACTTGCTGCTATGGGG...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617926.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCCTGCTCATCGATCGCTaGCTCCTGACCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: LLGQLSIPRLCSMLHGILLLIDR*LLTHTV
Trigger: AACAGTGTGGGTCAGGAGGCAGCGATCGATGAGCAG...GAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp TCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGCCTGAGGACGCCCAGTaGCCACATCTGCATGGACCC +
Preference number: 4 (lower is better)
Translates to: SASRDSAACCMASSEFRLPEDAQ*PHLHGP
Trigger: GGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGG...CAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAAAAGTCCACGAGGTTGTaGCTCCAGGCCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQKSTRL*LQASSS
Trigger: GCTTGAGCTGGCCTGGAGGCACAACCTCGTGGACTT...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCTTGCGTCCCCTGTGCTaGTGGAGTGACATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPLRPLC*WSDMLL
Trigger: AAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAA...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGTTGTCCAGGTGTCCCTaGCTCCCATTGCGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWLSRCP*LPLRPL
Trigger: CAGGGGACGCAATGGGAGGCAGGGACACCTGGACAA...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGACGAACAGGGAGGATCTaGGCCATGGCTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGRTGRI*AMAGAG
Trigger: TCCCGCACCAGCCATGGCGCAGATCCTCCCTGTTCG...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGGAGTCACCTTCCATaGTCCAGTGGTAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRGSHLP*SSGRPR
Trigger: CCGCGGTCTACCACTGGAGCATGGAAGGTGACTCCC...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGGGGAGTCACCTTCCATaGTCCAGTGGTAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPGSHLP*SSGRPR
Trigger: CCGCGGTCTACCACTGGAGCATGGAAGGTGACTCCC...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGGGAGTCACCTTCCATaGTCCAGTGGTAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGGSHLP*SSGRPR
Trigger: CCGCGGTCTACCACTGGAGCATGGAAGGTGACTCCC...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCTTTGCTGAGCCGAGATaGCTACGAGCAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGFAEPR*LRAAAT
Trigger: AGTGGCTGCTGCTCGTAGGCATCTCGGCTCAGCAAA...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGTTGCTGCAGGAGGCCTaGCTTCTCACAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRLLQEA*LLTELG
Trigger: GCCCAGCTCTGTGAGAAGGCAGGCCTCCTGCAGCAA...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCTTCTGCACGGTGTAGTGCTCCAGTaGTTGCTGCAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: IKQPSNHSWGPARVDLLHGVVLQ*LLQEAC
Trigger: GCAGGCCTCCTGCAGCAAGCACTGGAGCACTACACC...GTGCAGAAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR GCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAGCTCGCGATGTCCAGTaGGTCATAGTTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAARDVQ*VIVVQA
Trigger: CGCCTGGACAACTATGACGCACTGGACATCGCGAGC...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGCTCAGCCCACAGGTGTaGCTGCTCTGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLLSPQV*LLCSPQ
Trigger: CTGAGGGCTGCAGAGCAGGCACACCTGTGGGCTGAG...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCGGGCCCACCAGTTATTaGCCTTGTACAGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: LLGQLSIPRLCSMLHGILGPTSY*PCTDRP
Trigger: CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCC...GAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CCA 90 bp CCACATCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAAGAAGTCTCCCCCAGAAGTCTCCCCCGCTaGCATGCTGCTCATCGATCG +
Preference number: 4 (lower is better)
Translates to: PHLHGPDVLSWLRKEVSPRSLPR*HAAHRS
Trigger: CGATCGATGAGCAGCATGCCAGCGGGGGAGACTTCT...GGGGGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCACCCGATGTGCTGAGCTaGCTCCGGAAAGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAPDVLS*LRKEVS
Trigger: GGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGG...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIIHRGS*QGLGPR
Trigger: CCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGAT...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTGCGGAAGTTGTACATTaGAGGCTGGCGAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: CRLKLVLRRQPLPWPPQAAEVVH*RLAKLG
Trigger: TCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGC...AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACT +
Preference number: 4 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSTLQVG*VVTTPT
Trigger: AGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCGTCTTCAAACTGGCCTaGAGGGGGCAGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGVFKLA*RGQLQP
Trigger: TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGAC...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACGAGGTGAACCAAGGTaGAAGCCAGGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQRGEPR*KPGGQS
Trigger: ACTTTGCCCGCCTGGCTTCCACCTTGGTTCACCTCG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
3UTR CAA 72 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTaGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRK*YIGGWRSWEQR
Trigger: CCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GTGCCCACATCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAAGAAGTCTCATGGACCCGATGTGCTaGGCTGGCTCCGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VPTSAWTRCAELAPERSLMDPMC*AGSGKK
Trigger: CTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCAT...GAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR TCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCGCAACCTGGGGTGCATaGACAAGGTTCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPATWGA*TRFISN
Trigger: GTTGGAGATGAACCTTGTTCATGCACCCCAGGTTGC...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGGACCACAGCCCTCTTaGTGTCATAGAGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSGPQPS*CHRGRC
Trigger: ACACCGACCTCTATGACATCAAGAGGGCTGTGGTCC...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATCGGGATTGAGGAGGTaGGTGTGGACCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTSGLRR*VWTTAL
Trigger: GAGGGCTGTGGTCCACACTCACCTCCTCAATCCCGA...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAATCGGGATTGAGGAGGTaGGTGTGGACCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQSGLRR*VWTTAL
Trigger: GAGGGCTGTGGTCCACACTCACCTCCTCAATCCCGA...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTTCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPSSPPP*SALSYR
Trigger: CCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGA...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGATCCTCACAGCCTTCCTaGATCTGGGACTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGSSQPS*IWDSSQ
Trigger: CTGGCTGGAGTCCCAGATTCAGGAAGGCTGTGAGGA...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTTGGGCTTGGGCCAGCTaGCTCCACACAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIWAWAS*LHTAGS
Trigger: TGAGCCTGCTGTGTGGAGTCAGCTGGCCCAAGCCCA...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCGGATGGCCAGCTCAGTaGACATGCCCATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISGWPAQ*TCPCGP
Trigger: GGGCCCACATGGGCATGTTCACTGAGCTGGCCATCC...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCGTGGTCCAGCCGGGGTaGAAGCACCAGCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSVVQPG*KHQQQV
Trigger: GACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCAC...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGTTGTGGCTCTGGACTaGCCGCAGGTAAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGVVALD*PQVRLH
Trigger: GTGAAGCCTTACCTGCGGTCAGTCCAGAGCCACAAC...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGGTTGTGGCTCTGGACTaGCCGCAGGTAAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPVVALD*PQVRLH
Trigger: GTGAAGCCTTACCTGCGGTCAGTCCAGAGCCACAAC...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAAGGCCGCAATGCACCTaGACTCCATCAGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMARPQCT*TPSADA
Trigger: AGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCT...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
CDS-3UTR TCA 90 bp CATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGGAGCTGCATGGCATCCTCTaGGTTCCGTTTGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: HPATLQHAAWHPLSSVWELHGIL*VPFGRP
Trigger: GGGTCTCCCAAACGGAACTCAGAGGATGCCATGCAG...CTCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCCATGCTCCTCTTGCTTaGGCAGACTCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGHAPLA*ADSPRH
Trigger: ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATG...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTATTGTCCAGGTGTCCCTaGCTCCCATTGCGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLLSRCP*LPLRPL
Trigger: CAGGGGACGCAATGGGAGGCAGGGACACCTGGACAA...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTATTGTCCAGGTGTCCCTaGCTCCCATTGCGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLLSRCP*LPLRPL
Trigger: CAGGGGACGCAATGGGAGGCAGGGACACCTGGACAA...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCCATGATGGCACTCTCTaGAGAGATAGGCCGTCGGAT +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVAHDGTL*RDRPSD
Trigger: ATCCGACGGCCTATCTCTGCAGAGAGTGCCATCATG...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCTCCATCTTGAACTCTaGAAAAGCCGCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPLHLEL*KSRSMA
Trigger: GGCCATGCTGCGGCTTTTGCAGAGTTCAAGATGGAG...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATTGCTCCAGTGCTTGCTaGAGGAGGCCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHCSSAC*RRPAFS
Trigger: TGAGAAGGCAGGCCTCCTGCAGCAAGCACTGGAGCA...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGATCCACGTCCGGGTGCTaGTGGCCTTGCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGSTSGC*WPCGCC
Trigger: ACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGA...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCCTTCCACGTCCGGGTaGTGCTGGCCTTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLPSTSG*CWPCGC
Trigger: ACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGG...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAAGACCACACAGCTGTaGGAAGCGGAACTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGKTTQL*EAELLS
Trigger: GGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTT...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCAAGACCACACAGCTGTaGGAAGCGGAACTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGKTTQL*EAELLS
Trigger: GGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTT...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCCTCAGCCCACAGGTGTaGCTGCTCTGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRLSPQV*LLCSPQ
Trigger: CTGAGGGCTGCAGAGCAGGCACACCTGTGGGCTGAG...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTGGGCCCACCAGTTATTaGCCTTGTACAGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPGPTSY*PCTDRP
Trigger: CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCC...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
CDS-3UTR GCA 90 bp CAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGCGCGACTCTGCAGCATaGTGCATGGCATCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QHPATLQHAAWHPLSSVWRDSAA*CMASSE
Trigger: CTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCG...CCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRIHRGS*QGLGPR
Trigger: CCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGAT...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGATCCATAGGGGAAGCTaGCAGGGGCTGGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGIHRGS*QGLGPR
Trigger: CCGTGGGCCCAGCCCCTGCCAGCTTCCCCTATGGAT...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACGGCCTCCCCAGGCTCTaGGATGGCTCAGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYGLPRL*DGSEVA
Trigger: GGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCGGCCTCCCCAGGCTCTaGGATGGCTCAGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNAGLPRL*DGSEVA
Trigger: GGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCGAAGTACTGCAGCAATaGAGAAGCCTGGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPEVLQQ*RSLARL
Trigger: CAGTCTGGCCAGGCTTCTCCATTGCTGCAGTACTTC...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCGCCTTCTCACAGAGCTaGGCAATGTGGGCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISAFSQS*AMWARS
Trigger: CGACCGGGCCCACATTGCCCAGCTCTGTGAGAAGGC...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAATGATGAGGGGAAGCTaGTCTGTGAGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSMMRGS*SVSLAS
Trigger: GGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCAT...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAACGTCCGGGTGCTGCTaGCCTTGCGGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGTSGCC*PCGCCP
Trigger: TGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGT...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCACGTCCGGGTGCTGCTaGCCTTGCGGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISTSGCC*PCGCCP
Trigger: TGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGT...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWELTVQV*SSRGES
Trigger: GCTTTCACCCCGGCTGGACCACACCTGGACAGTCAG...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCACAGAGCTCCACGCTCTaGGCCCACCAGTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAQSSTL*AHQLLP
Trigger: GGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTG...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR CCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCACCGCTGCTGGTCTGTaGCCTGTTAGGAATCACGCC +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGTAAGL*PVRNHA
Trigger: GGCGTGATTCCTAACAGGCCACAGACCAGCAGCGGT...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617926.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATGCAGGTCATAGCAGGTaGAGAGACAAGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHAGHSR*RDKLRS
Trigger: GCTTCGCAGCTTGTCTCTTCACCTGCTATGACCTGC...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAGAAGCCTGGCCAGACTaGGCGGGTATACTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWREAWPD*AGILWN
Trigger: ATTCCAGAGTATACCCGCTCAGTCTGGCCAGGCTTC...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GTAGCAGCTGCTCTCTCGGCATATCCTCTCCACCTCCTTGATCTGCCCTGTCTTTCGGGATTGAGGAGGTaGGTGTGGACCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: VAAALSAYPLHLLDLPCLSGLRR*VWTTAL
Trigger: GAGGGCTGTGGTCCACACTCACCTCCTCAATCCCGA...AAGACAGGGCAGATCAAGGAGGTGGAGAGGATATGCCGAGAGAGCAGCTGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACACAAGCCACTCGGGATTaGGGAGGTGAGTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTQATRD*GGECGP
Trigger: TGGTCCACACTCACCTCCTCAATCCCGAGTGGCTTG...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCACATCTGGGTCTTGGCTaGAGTTCACGATTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAHLGLG*SSRLSP
Trigger: TGGGCTCAATCGTGAACTTCAGCCAAGACCCAGATG...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGATCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRSSPPP*SALSYR
Trigger: CCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGA...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGTCCTCACAGCCTTCCTaGATCTGGGACTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWESSQPS*IWDSSQ
Trigger: CTGGCTGGAGTCCCAGATTCAGGAAGGCTGTGAGGA...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCTTAGCCAGTGCATTGTaGGTGGCAGGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGLASAL*VAGSSQ
Trigger: CTGTGAGGAGCCTGCCACTCACAATGCACTGGCTAA...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCGTCTCCTCAAGGACGTaGGCCCAGAGCTCCGGATCC +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRVSSRT*AQSSGS
Trigger: GGATCCGGAGCTCTGGGCTCACGTCCTTGAGGAGAC...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCAGGATCCCGTGTTTCTaGCAATGCTGTCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVARIPCF*QCCLYH
Trigger: GTGGTACAGACAGCATTGTCAGAAACACGGGATCCT...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGACATACAGTGCGCTGCTaGCAGCGATGCTCGCGATGT +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGHTVRC*QRCSRC
Trigger: ACATCGCGAGCATCGCTGTCAGCAGCGCACTGTATG...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGTGGGCTTGGGCCAGCTaGCTCCACACAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLWAWAS*LHTAGS
Trigger: TGAGCCTGCTGTGTGGAGTCAGCTGGCCCAAGCCCA...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGTGGGCTTGGGCCAGCTaGCTCCACACAGCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRWAWAS*LHTAGS
Trigger: TGAGCCTGCTGTGTGGAGTCAGCTGGCCCAAGCCCA...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACGGATGGCCAGCTCAGTaGACATGCCCATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYGWPAQ*TCPCGP
Trigger: GGGCCCACATGGGCATGTTCACTGAGCTGGCCATCC...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTGCACCTTTGGGATGTTaGCACGGGACCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPAPLGC*HGTRKA
Trigger: AGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGC...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAAATGATGTCCTTGAACTaGCCCTCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQMMSLN*PSFQAS
Trigger: TGAGGCCTGGAAGGAGGGTCAGTTCAAGGACATCAT...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGGATGCTTCTCCAGCTGCTaGGCCAGGCTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ASRDSAACCMASSEFRLGCFSSC*ARLMLS
Trigger: TGACAACATCAGCCTGGCTCAGCAGCTGGAGAAGCA...TCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWSSRNH*SNFWAS
Trigger: GCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGA...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLESSRNH*SNFWAS
Trigger: GCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGA...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGATCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGSSRNH*SNFWAS
Trigger: GCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGA...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACATGCTCCTCTTGCTTaGGCAGACTCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQHAPLA*ADSPRH
Trigger: ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCCATTGCGTCCCCTGTaGTGCTGGAGTGACATGCTC +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEPLRPL*CWSDML
Trigger: GAGCATGTCACTCCAGCAGCACAGGGGACGCAATGG...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCCCATTGCGTCCCCTGTaGTGCTGGAGTGACATGCTC +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGPLRPL*CWSDML
Trigger: GAGCATGTCACTCCAGCAGCACAGGGGACGCAATGG...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCCGAACAGGGAGGATCTaGGCCATGGCTGGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSRTGRI*AMAGAG
Trigger: TCCCGCACCAGCCATGGCGCAGATCCTCCCTGTTCG...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCTACGGTTCATGCAGATaGACACGCCAGACTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVAYGSCR*TRQTLG
Trigger: ACCTAGAGTCTGGCGTGTGCATCTGCATGAACCGTA...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCCACAAACAACTTCTCTaGCCCAGCCAGGTTACTACG +
Preference number: 4 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGHKQLL*PSQVTT
Trigger: CGTAGTAACCTGGCTGGGGCAGAGAAGTTGTTTGTG...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCACAGGATTCCCTTTGGTaGAGACGCTGCAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAQDSLW*RRCNFG
Trigger: GCCAAAGTTGCAGCGTCTGCACCAAAGGGAATCCTG...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp ATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCTTTGCTCCAGTGCTTGCTaGAGGAGGCCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IHIKQPSNHSWGPARVDLCSSAC*RRPAFS
Trigger: TGAGAAGGCAGGCCTCCTGCAGCAAGCACTGGAGCA...AAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR GCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTGCAGACAGCATGGCATaGAGACACTCCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPADSMA*RHSTES
Trigger: GGATTCTGTGGAGTGTCTGCATGCCATGCTGTCTGC...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGTCCACCTCCTTGATCTaGCCTGTCTTACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRSTSLI*PVLQAA
Trigger: GGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGA...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCCTGGGTTGTAGCAGCTaGTCTCTCGGCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: NFWASSASRDSAACCMASLGCSS*SLGISS
Trigger: AGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAG...GGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGACCCGTGTGCGGTCTaGCTTGATGGCAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGDPCAV*LDGSQD
Trigger: ATCCTGACTGCCATCAAGGCAGACCGCACACGGGTC...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGCTCGCGATGTCCAGTaGGTCATAGTTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLARDVQ*VIVVQA
Trigger: CGCCTGGACAACTATGACGCACTGGACATCGCGAGC...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCCCAGTTGTTGCTCCTaGTGGCTGACTGAACAACTT +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPPSCCS*WLTEQL
Trigger: AAGTTGTTCAGTCAGCCAGCAGGAGCAACAACTGGG...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCCCCAGTTGTTGCTCCTaGTGGCTGACTGAACAACTT +
Preference number: 4 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGPSCCS*WLTEQL
Trigger: AAGTTGTTCAGTCAGCCAGCAGGAGCAACAACTGGG...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGCGGCTGTTGTCCACTaGTGCCTGATACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWAAVVH*CLILTE
Trigger: CTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGC...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAGCGGCTGTTGTCCACTaGTGCCTGATACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAAAVVH*CLILTE
Trigger: CTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGC...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGCTCAGCCCACAGGTGTaGCTGCTCTGCAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRLSPQV*LLCSPQ
Trigger: CTGAGGGCTGCAGAGCAGGCACACCTGTGGGCTGAG...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAGGGCCCACCAGTTATTaGCCTTGTACAGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRGPTSY*PCTDRP
Trigger: CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCC...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR CCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCGTCCCCTGTGCTGCTaGAGTGACATGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWERPLCC*SDMLLG
Trigger: TCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACG...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTACGTCCCCTGTGCTGCTaGAGTGACATGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLRPLCC*SDMLLG
Trigger: TCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACG...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAGTCTTCAAACTGGCCTaGAGGGGGCAGCTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPVFKLA*RGQLQP
Trigger: TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGAC...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCACGAGGTTGTGCCTCCAGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTGCAAAAGCCGCAGCATaGCCTTCTATGGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: PRGCASRPAQAPCLGEAGAKAAA*PSMGCE
Trigger: TTCACAACCCATAGAAGGCCATGCTGCGGCTTTTGC...ACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCTGGAGGCACAACCTCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAGACGCTGCAACTTTaGCGGCTTCAGCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPQTLQL*RLQHSC
Trigger: GCAGCTATGCTGAAGCCGCCAAAGTTGCAGCGTCTG...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGACGCAGGATTCCCTTTaGTGCAGACGCTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWTQDSL*CRRCNF
Trigger: AAAGTTGCAGCGTCTGCACCAAAGGGAATCCTGCGT...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACAGGAGTCCCTCAGCTaGGCGATTATTCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQQESLS*AIILQG
Trigger: GCCTTGAAGAATAATCGCCCAGCTGAGGGACTCCTG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCGCCTTCTCACAGAGCTaGGCAATGTGGGCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRAFSQS*AMWARS
Trigger: CGACCGGGCCCACATTGCCCAGCTCTGTGAGAAGGC...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAGTGCCCAGCTGCTCGTaGTACTTAGAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGVPSCS*YLEATC
Trigger: GCAGGTGGCCTCTAAGTACCACGAGCAGCTGGGCAC...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGCGAGGTGAACCAAGGTaGAAGCCAGGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLRGEPR*KPGGQS
Trigger: ACTTTGCCCGCCTGGCTTCCACCTTGGTTCACCTCG...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACACGAGGTGAACCAAGGTaGAAGCCAGGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTRGEPR*KPGGQS
Trigger: ACTTTGCCCGCCTGGCTTCCACCTTGGTTCACCTCG...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCACGTCCGGGTGCTGCTaGCCTTGCGGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSTSGCC*PCGCCP
Trigger: TGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGT...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTACAGGCCTCAGTGGGGTaGCTCATCATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLQASVG*LIMVST
Trigger: TGTGCTCACCATGATGAGCCACCCCACTGAGGCCTG...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGCAGGCCTCAGTGGGGTaGCTCATCATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLQASVG*LIMVST
Trigger: TGTGCTCACCATGATGAGCCACCCCACTGAGGCCTG...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCCTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRLTVQV*SSRGES
Trigger: GCTTTCACCCCGGCTGGACCACACCTGGACAGTCAG...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGTCCTCTGTCAGCAGGTaGTTGAGTGCCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWSSVSR*LSASFT
Trigger: TGTGAATGAGGCACTCAACCACCTGCTGACAGAGGA...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAAGAAGCCTGGCCAGACTaGGCGGGTATACTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQEAWPD*AGILWN
Trigger: ATTCCAGAGTATACCCGCTCAGTCTGGCCAGGCTTC...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCAGGATTCAAGTTTATTaGGCTGACCCTGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPRIQVY*ADPGRA
Trigger: TGCTCGACCAGGGTCAGCTCAATAAACTTGAATCCT...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAGTCTCCGAGCTCCTCTaGGCACTCCAGCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLVSELL*ALQLIF
Trigger: GAAGATAAGCTGGAGTGCTCAGAGGAGCTCGGAGAC...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATCAAGCCACTCGGGATTaGGGAGGTGAGTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHQATRD*GGECGP
Trigger: TGGTCCACACTCACCTCCTCAATCCCGAGTGGCTTG...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCTTCTGCACCATCTGGGTCTTGGCTaGAGTTCACGATTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IKQPSNHSWGPARVDLLHHLGLG*SSRLSP
Trigger: TGGGCTCAATCGTGAACTTCAGCCAAGACCCAGATG...GTGCAGAAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTCATACAGTGCGCTGCTaGCAGCGATGCTCGCGATGT +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIHTVRC*QRCSRC
Trigger: ACATCGCGAGCATCGCTGTCAGCAGCGCACTGTATG...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGGCACCTTTGGGATGTTaGCACGGGACCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWAPLGC*HGTRKA
Trigger: AGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGC...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGATGATGTCCTTGAACTaGCCCTCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRMMSLN*PSFQAS
Trigger: TGAGGCCTGGAAGGAGGGTCAGTTCAAGGACATCAT...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGGTTGTGGCTCTGGACTaGCCGCAGGTAAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTVVALD*PQVRLH
Trigger: GTGAAGCCTTACCTGCGGTCAGTCCAGAGCCACAAC...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCT +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGLSAGG*VPHSHS
Trigger: AGAGTGTGAATGAGGCACTCAACCACCTGCTGACAG...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTATGCTTCTCCAGCTGCTaGGCCAGGCTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLCFSSC*ARLMLS
Trigger: TGACAACATCAGCCTGGCTCAGCAGCTGGAGAAGCA...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGAGGCCGCAATGCACCTaGACTCCATCAGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLRPQCT*TPSADA
Trigger: AGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCT...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp TCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGAGGCCGCAATGCACCTaGACTCCATCAGCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SASRDSAACCMASSEFRLRPQCT*TPSADA
Trigger: AGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCT...CAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR TCA 90 bp CACACGATGATGAGGGGAAGCTGGTCTGTGAGCTTGGCCTCCTTCAGGAAGTTCAAGAGGCCTCGGGATTaGGGAGGTGAGTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: HTMMRGSWSVSLASFRKFKRPRD*GGECGP
Trigger: TGGTCCACACTCACCTCCTCAATCCCGAGGCCTCTT...GAACTTCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCATCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR GCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGTCCTCCAGGAACCACTaGAGCAACTTCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQSSRNH*SNFWAS
Trigger: GCTGGCCCAGAAGTTGCTGCAGTGGTTCCTGGAGGA...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
CDS-3UTR GCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCAAGTCCACGAGGTTGTaGCTCCAGGCCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRKSTRL*LQASSS
Trigger: GCTTGAGCTGGCCTGGAGGCACAACCTCGTGGACTT...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCCATGCTCCTCTTGCTTaGGCAGACTCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGHAPLA*ADSPRH
Trigger: ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATG...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGGTCACATGCTCCTCTTaGTTGCGCAGACTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPVTCSS*LRRLSK
Trigger: CTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGAC...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGATCGTGACCTGTGCCTaGTCACCAACTTTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRIVTCA*SPTFSR
Trigger: CCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGAT...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCAATGATCGTGACCTGTaGCTGCTCACCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVANDRDL*LLTNFL
Trigger: GAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATT...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGTTTGCTGAGCCGAGATaGCTACGAGCAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEFAEPR*LRAAAT
Trigger: AGTGGCTGCTGCTCGTAGGCATCTCGGCTCAGCAAA...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCCCAACTTCAATGATGTaGAACTTGCCTCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGPTSMM*NLPPVG
Trigger: TCCCACAGGAGGCAAGTTGCACATCATTGAAGTTGG...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCCAACTTCAATGATGTaGAACTTGCCTCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPPTSMM*NLPPVG
Trigger: TCCCACAGGAGGCAAGTTGCACATCATTGAAGTTGG...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGACGGCTTCAGCATAGCTaGCCTGTGCAAAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRRLQHS*PVQRGY
Trigger: ATACCCTCTTTGCACAGGGCAGCTATGCTGAAGCCG...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCGGCTTCAGCATAGCTaGCCTGTGCAAAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPRLQHS*PVQRGY
Trigger: ATACCCTCTTTGCACAGGGCAGCTATGCTGAAGCCG...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCATTGCTGCAGGAGGCCTaGCTTCTCACAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPLLQEA*LLTELG
Trigger: GCCCAGCTCTGTGAGAAGGCAGGCCTCCTGCAGCAA...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTGCTCCAGTGCTTGCTaGAGGAGGCCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRCSSAC*RRPAFS
Trigger: TGAGAAGGCAGGCCTCCTGCAGCAAGCACTGGAGCA...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGGGTGTAGTGCTCCAGTaGTTGCTGCAGGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLGVVLQ*LLQEAC
Trigger: GCAGGCCTCCTGCAGCAAGCACTGGAGCACTACACC...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGGCAGACAGCATGGCATaGAGACACTCCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWADSMA*RHSTES
Trigger: GGATTCTGTGGAGTGTCTGCATGCCATGCTGTCTGC...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCTTTCCACCTCCTTGATCTaGCCTGTCTTACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IHIKQPSNHSWGPARVDLSTSLI*PVLQAA
Trigger: GGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGA...AAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR GCA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGACTGGGTTGTAGCAGCTaGTCTCTCGGCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGLGCSS*SLGISS
Trigger: AGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAG...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCGTAGATTTTAGCCAGTaGATTGTGAGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVAVDFSQ*IVSGRL
Trigger: GAGCCTGCCACTCACAATGCACTGGCTAAAATCTAC...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCGTAGATTTTAGCCAGTaGATTGTGAGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPVDFSQ*IVSGRL
Trigger: GAGCCTGCCACTCACAATGCACTGGCTAAAATCTAC...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGACCCGTGTGCGGTCTaGCTTGATGGCAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQDPCAV*LDGSQD
Trigger: ATCCTGACTGCCATCAAGGCAGACCGCACACGGGTC...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGGATCCTCCCAGTTGTTaGTCCTGCTGGCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPDPPSC*SCWLTE
Trigger: TTCAGTCAGCCAGCAGGAGCAACAACTGGGAGGATC...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCGCTGTTGTCCACTGCTaGCTGATACTCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGAVVHC*LILTEV
Trigger: CACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGC...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAGCTGTTGTCCACTGCTaGCTGATACTCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTAVVHC*LILTEV
Trigger: CACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGC...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGCGGCTGTTGTCCACTaGTGCCTGATACTCACCGAG +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIAAVVH*CLILTE
Trigger: CTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGC...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGATCCACGTCCGGGTGCTaGTGGCCTTGCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGSTSGC*WPCGCC
Trigger: ACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGA...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCCTCCTCCAGCTCATCTaGATGAATGACGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGLLQLI*MNDDVK
Trigger: CTTCACATCGTCATTCATGCAGATGAGCTGGAGGAG...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGGAGACTCTGCAGCATGCTaGATGGCATCCTCTGAGTTC +
Preference number: 4 (lower is better)
Translates to: ASRDSAACCMASSEFRLGDSAAC*MASSEF
Trigger: GAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTC...TCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCGCGGAAGTTGTACATTaGAGGCTGGCGAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGAEVVH*RLAKLG
Trigger: TCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGC...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGGGAGGATCTGCGCCATaGCTGGTGCGGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEGGSAP*LVRDLG
Trigger: GCCGAGGTCCCGCACCAGCCATGGCGCAGATCCTCC...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGTCGGATCGGAGCCATTaGGTCACTCATGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWSDRSH*VTHVND
Trigger: ATCATTGACATGAGTGACCCAATGGCTCCGATCCGA...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCTCGGATCGGAGCCATTaGGTCACTCATGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVASDRSH*VTHVND
Trigger: ATCATTGACATGAGTGACCCAATGGCTCCGATCCGA...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAAGCAACTTGCCTCCTGTaGGATTACGTACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQATCLL*DYVQQS
Trigger: GCTTTGCTGTACGTAATCCCACAGGAGGCAAGTTGC...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCGATTCTGAAGCACGTTaGTTGCATAATTCACAATGT +
Preference number: 4 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFDSEAR*LHNSQC
Trigger: ACATTGTGAATTATGCAACCAACGTGCTTCAGAATC...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CCACGAGGTTGTGCCTCCAGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTATACTCTGGAATTTCTaGACCGTCTCTCTGGTACGC +
Preference number: 4 (lower is better)
Translates to: PRGCASRPAQAPCLGEAGILWNF*TVSLVR
Trigger: GCGTACCAGAGAGACGGTCCAGAAATTCCAGAGTAT...ACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCTGGAGGCACAACCTCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATGAAGTACTGCAGCAATaGAGAAGCCTGGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHEVLQQ*RSLARL
Trigger: CAGTCTGGCCAGGCTTCTCCATTGCTGCAGTACTTC...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGGAAGTACTGCAGCAATaGAGAAGCCTGGCCAGACTG +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWEVLQQ*RSLARL
Trigger: CAGTCTGGCCAGGCTTCTCCATTGCTGCAGTACTTC...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCCTGGATCACTTTGCTTaGCACATTTGCCCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGLDHFA*HICPKV
Trigger: TACCTTCGGGCAAATGTGCCAAGCAAAGTGATCCAG...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAGCCTTCTCACAGAGCTaGGCAATGTGGGCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGAFSQS*AMWARS
Trigger: CGACCGGGCCCACATTGCCCAGCTCTGTGAGAAGGC...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAATGATGAGGGGAAGCTaGTCTGTGAGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAMMRGS*SVSLAS
Trigger: GGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCAT...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGAGTTGTTGCTCCTGCTaGCTGACTGAACAACTTCCA +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQSCCSC*LTEQLP
Trigger: TGGAAGTTGTTCAGTCAGCCAGCAGGAGCAACAACT...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGCGGTCTCCAACCTGCTaGATGTGGGCATTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLERSPTC*MWALLG
Trigger: ACCCAACAATGCCCACATCCAGCAGGTTGGAGACCG...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCACGAGGTGAACCAAGGTaGAAGCCAGGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPRGEPR*KPGGQS
Trigger: ACTTTGCCCGCCTGGCTTCCACCTTGGTTCACCTCG...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAACGTCCGGGTGCTGCTaGCCTTGCGGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGETSGCC*PCGCCP
Trigger: TGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGT...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGAGCCCTCAGCACCTTTaGGATGTTGACACGGGACCA +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLSPQHL*DVDTGP
Trigger: TGGTCCCGTGTCAACATCCCAAAGGTGCTGAGGGCT...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGAGCCCTCAGCACCTTTaGGATGTTGACACGGGACCA +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWSPQHL*DVDTGP
Trigger: TGGTCCCGTGTCAACATCCCAAAGGTGCTGAGGGCT...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTCAGGCCTCAGTGGGGTaGCTCATCATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSQASVG*LIMVST
Trigger: TGTGCTCACCATGATGAGCCACCCCACTGAGGCCTG...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCTGAGTTCCGTTTGGGACTGCAGCATGCTGCATaGCATCCTCTGAGTTCCGTT +
Preference number: 4 (lower is better)
Translates to: ASRDSAACCMASSEFRLGLQHAA*HPLSSV
Trigger: AACGGAACTCAGAGGATGCCATGCAGCATGCTGCAG...TCCCAAACGGAACTCAGAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
3UTR CAA 72 bp GTGGTGACAACGCCCACTACACGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCC +
Preference number: 4 (lower is better)
Translates to: VVTTPTTRGSCT*EAGEVGSRGIS
Trigger: GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGCAGGTCATAGCAGGTaGAGAGACAAGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQAGHSR*RDKLRS
Trigger: GCTTCGCAGCTTGTCTCTTCACCTGCTATGACCTGC...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538828.1
ENST00000617103.4
CDS-3UTR TCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCGCTGTCCAACTTCAATaGTGTGCAACTTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGAVQLQ*CATCLL
Trigger: CAGGAGGCAAGTTGCACATCATTGAAGTTGGACAGC...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATGCTGTCCAACTTCAATaGTGTGCAACTTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHAVQLQ*CATCLL
Trigger: CAGGAGGCAAGTTGCACATCATTGAAGTTGGACAGC...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGTGGGGTCAGTGGTTTTaGCCAAGTCTCCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGWGQWF*PSLRAP
Trigger: AGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCA...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGGGCCCTGTTCCGGACTaGTCTTCATTACACCCCTCA +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGGPVPD*SSLHPS
Trigger: TGAGGGGTGTAATGAAGATCAGTCCGGAACAGGGCC...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGCAACCTGGGGTGCATaGACAAGGTTCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGATWGA*TRFISN
Trigger: GTTGGAGATGAACCTTGTTCATGCACCCCAGGTTGC...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGGACCACAGCCCTCTTaGTGTCATAGAGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPGPQPS*CHRGRC
Trigger: ACACCGACCTCTATGACATCAAGAGGGCTGTGGTCC...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCGGCCTTTGTAACTCTTaGAGGATTCAAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPGLCNS*RIQRAP
Trigger: TGGAGCTCTTTGAATCCTTCAAGAGTTACAAAGGCC...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCCATCTGGGTCTTGGCTaGAGTTCACGATTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGHLGLG*SSRLSP
Trigger: TGGGCTCAATCGTGAACTTCAGCCAAGACCCAGATG...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CACACGATGATGAGGGGAAGCTGGTCTGTGAGCTTGGCCTCCTTCAGGAAGTTCTCCTCTCCACCTCCTTaGTCTGCCCTGTCTTACAGG +
Preference number: 4 (lower is better)
Translates to: HTMMRGSWSVSLASFRKFSSPPP*SALSYR
Trigger: CCTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGA...GAACTTCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCATCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGGGGAAGCTGGTCTGTaGGCTTGGCCTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEGEAGL*AWPPSG
Trigger: TCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCC...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGAGGATCCCGTGTTTCTaGCAATGCTGTCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWRIPCF*QCCLYH
Trigger: GTGGTACAGACAGCATTGTCAGAAACACGGGATCCT...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAGTGTGCGGTCTGCCTTaGTGGCAGTCAGGATCAACA +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGVCGLP*WQSGST
Trigger: TGTTGATCCTGACTGCCATCAAGGCAGACCGCACAC...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGTGTGCGGTCTGCCTTaGTGGCAGTCAGGATCAACA +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRVCGLP*WQSGST
Trigger: TGTTGATCCTGACTGCCATCAAGGCAGACCGCACAC...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCCATACAGTGCGCTGCTaGCAGCGATGCTCGCGATGT +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRHTVRC*QRCSRC
Trigger: ACATCGCGAGCATCGCTGTCAGCAGCGCACTGTATG...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGTTGCTCCTGCTGGCTaGCTGAACAACTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLVAPAG*LNNFQV
Trigger: TACCTGGAAGTTGTTCAGTCAGCCAGCAGGAGCAAC...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGCACCTTTGGGATGTTaGCACGGGACCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLAPLGC*HGTRKA
Trigger: AGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGC...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp AACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCCAGCTGACCTGCCTTTaGAAAGAAACTGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: NFWASSASRDSAACCMASQLTCL*KETDCP
Trigger: TGGACAGTCAGTTTCTTTTCAAAGGCAGGTCAGCTG...GGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGTTGTGGCTCTGGACTaGCCGCAGGTAAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGVVALD*PQVRLH
Trigger: GTGAAGCCTTACCTGCGGTCAGTCCAGAGCCACAAC...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp GTGCCCACATCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAAGAAGTCTCGCTGCTGAGCCAGGCTaGTGTTGTCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VPTSAWTRCAELAPERSLAAEPG*CCQSCH
Trigger: ATGACAACTTTGACAACATCAGCCTGGCTCAGCAGC...GAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR TCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGCAAAGCACACCGAGGTaGACCAAGGTGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLQSTPR*TKVEAR
Trigger: CCTGGCTTCCACCTTGGTTCACCTCGGTGTGCTTTG...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCAAGTCCACGAGGTTGTaGCTCCAGGCCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSKSTRL*LQASSS
Trigger: GCTTGAGCTGGCCTGGAGGCACAACCTCGTGGACTT...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAAAAGTCCACGAGGTTGTaGCTCCAGGCCAGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IAGEETSCEALPLAFLQEKSTRL*LQASSS
Trigger: GCTTGAGCTGGCCTGGAGGCACAACCTCGTGGACTT...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGCATGCTCCTCTTGCTTaGGCAGACTCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLHAPLA*ADSPRH
Trigger: ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATG...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAGTCACATGCTCCTCTTaGTTGCGCAGACTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTVTCSS*LRRLSK
Trigger: CTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGAC...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTTGCGTCCCCTGTGCTaGTGGAGTGACATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRLRPLC*WSDMLL
Trigger: AAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAA...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGATGGCTCAGAGGTTaGCGTCATTGGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGGWLRG*RHWVSA
Trigger: TGCTGAAACCCAATGACGGCAACCTCTGAGCCATCC...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGGATGGCTCAGAGGTTaGCGTCATTGGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLGWLRG*RHWVSA
Trigger: TGCTGAAACCCAATGACGGCAACCTCTGAGCCATCC...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCCATGATGGCACTCTCTaGAGAGATAGGCCGTCGGAT +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGHDGTL*RDRPSD
Trigger: ATCCGACGGCCTATCTCTGCAGAGAGTGCCATCATG...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGAGGTTGGTTTCCCGCTaGAGGCTGTCCAACTTCAAT +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRRLVSR*RLSNFN
Trigger: ATTGAAGTTGGACAGCCTGCAGCGGGAAACCAACCT...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACAGGATTCCCTTTGGTaGAGACGCTGCAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLQDSLW*RRCNFG
Trigger: GCCAAAGTTGCAGCGTCTGCACCAAAGGGAATCCTG...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAAGCATTCGAGAAAACTaGAGGCCCTGTTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTSIREN*RPCSGL
Trigger: CAGTCCGGAACAGGGCCTGCAGTTTTCTCGAATGCT...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGAGCATTCGAGAAAACTaGAGGCCCTGTTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWSIREN*RPCSGL
Trigger: CAGTCCGGAACAGGGCCTGCAGTTTTCTCGAATGCT...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCTTCTGGGTTGTAGCAGCTaGTCTCTCGGCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: IHIKQPSNHSWGPARVDLLGCSS*SLGISS
Trigger: AGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAG...AAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR GCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCCTGGGTTGTAGCAGCTaGTCTCTCGGCATATCCTCT +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGLGCSS*SLGISS
Trigger: AGAGGATATGCCGAGAGAGCAGCTGCTACAACCCAG...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATAGCGGCCCACCACGCTaGTGTCATAGTAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHSGPPR*CHSRHS
Trigger: AGAATGCCTACTATGACAGCAGCGTGGTGGGCCGCT...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTAGCGGCCCACCACGCTaGTGTCATAGTAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYISGPPR*CHSRHS
Trigger: AGAATGCCTACTATGACAGCAGCGTGGTGGGCCGCT...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCGACCCGTGTGCGGTCTaGCTTGATGGCAGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSDPCAV*LDGSQD
Trigger: ATCCTGACTGCCATCAAGGCAGACCGCACACGGGTC...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCACACAGCAGGCTCATTaGATCTCTCCGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: NFWASSASRDSAACCMASTQQAH*ISPQTH
Trigger: ATGAGTTTGCGGAGAGATGCAATGAGCCTGCTGTGT...GGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGATCCTCCCAGTTGTTaGTCCTGCTGGCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWDPPSC*SCWLTE
Trigger: TTCAGTCAGCCAGCAGGAGCAACAACTGGGAGGATC...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGCAGCGGTCTCCAACCTaGTGGATGTGGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGQRSPT*WMWALL
Trigger: CAACAATGCCCACATCCAGCAGGTTGGAGACCGCTG...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAAAGACCACACAGCTGTaGGAAGCGGAACTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLKTTQL*EAELLS
Trigger: GGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTT...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAAGACCACACAGCTGTaGGAAGCGGAACTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGKTTQL*EAELLS
Trigger: GGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTT...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAGAAAAGCTCCAGATaGTCCAGCATCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPQKSSR*SSIFCG
Trigger: GCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTG...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCCCAGTTTGTCCACCTTaGTCAGGTACTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGPVCPP*SGTPSS
Trigger: TGATGAGGGAGTACCTGAGCAAGGTGGACAAACTGG...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGCCAGTTTGTCCACCTTaGTCAGGTACTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRPVCPP*SGTPSS
Trigger: TGATGAGGGAGTACCTGAGCAAGGTGGACAAACTGG...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGCGCGACTCTGCAGCATaGTGCATGGCATCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWRDSAA*CMASFE
Trigger: TTCAAAGGATGCCATGCAGCATGCTGCAGAGTCGCG...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS-3UTR CCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGCTCAAGCACCATGTCTaGGCGAAGCAGGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWLKHHV*AKQVIA
Trigger: TGCTATGACCTGCTTCGCCCAGACATGGTGCTTGAG...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGCGTCCCCTGTGCTGCTaGAGTGACATGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGRPLCC*SDMLLG
Trigger: TCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACG...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCTATCACCTTAGAGGCTaGATTCATGATGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPYHLRG*IHDGTL
Trigger: GAGAGTGCCATCATGAATCCAGCCTCTAAGGTGATA...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGCAGCATGGCCTTCTATaGGTTGTGAAACCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQQHGLL*VVKPSY
Trigger: ATAGGAAGGTTTCACAACCCATAGAAGGCCATGCTG...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACTGGATCACTTTGCTTaGCACATTTGCCCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQLDHFA*HICPKV
Trigger: TACCTTCGGGCAAATGTGCCAAGCAAAGTGATCCAG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACAGGAGTCCCTCAGCTaGGCGATTATTCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLQESLS*AIILQG
Trigger: GCCTTGAAGAATAATCGCCCAGCTGAGGGACTCCTG...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAACAGGAGTCCCTCAGCTaGGCGATTATTCTTCAAGGC +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQQESLS*AIILQG
Trigger: GCCTTGAAGAATAATCGCCCAGCTGAGGGACTCCTG...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGTGCCCAGCTGCTCGTaGTACTTAGAGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEVPSCS*YLEATC
Trigger: GCAGGTGGCCTCTAAGTACCACGAGCAGCTGGGCAC...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGTTTCAGATGCACATCTaGGTCTTGGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWFQMHI*VLAEVH
Trigger: GTGAACTTCAGCCAAGACCCAGATGTGCATCTGAAA...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TTCCTCAGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTATGATGAGGGGAAGCTaGTCTGTGAGCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FLRTIHIKQPSNHSWGPAMMRGS*SVSLAS
Trigger: GGAGGCCAAGCTCACAGACCAGCTTCCCCTCATCAT...AGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CCA 90 bp TGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTTTCATATCAAACTTGTaGAAAACGGTGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRLKLVLRRQPLPWPPQAFISNL*KTVKAS
Trigger: GGAGGCCTTCACCGTTTTCCACAAGTTTGATATGAA...AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGTGCTATAGAGCAGCTTaGCAGCCTCGTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPCYRAA*QPRTFP
Trigger: AGGGAATGTACGAGGCTGCCAAGCTGCTCTATAGCA...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGAGCCCTCAGCACCTTTaGGATGTTGACACGGGACCA +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQSPQHL*DVDTGP
Trigger: TGGTCCCGTGTCAACATCCCAAAGGTGCTGAGGGCT...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGCCCTCAGCACCTTTaGGATGTTGACACGGGACCA +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGSPQHL*DVDTGP
Trigger: TGGTCCCGTGTCAACATCCCAAAGGTGCTGAGGGCT...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCCAGGCCTCAGTGGGGTaGCTCATCATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSQASVG*LIMVST
Trigger: TGTGCTCACCATGATGAGCCACCCCACTGAGGCCTG...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGCTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCQQVVECLIHTLVVVALLTVQV*SSRGES
Trigger: GCTTTCACCCCGGCTGGACCACACCTGGACAGTCAG...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAACACTCTTGTTGTTGTaGCTCTGGACTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLTLLLL*LWTDRR
Trigger: CCTGCGGTCAGTCCAGAGCCACAACAACAAGAGTGT...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACCGCTGCTGGTCTGTaGCCTGTTAGGAATCACGCC +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYTAAGL*PVRNHA
Trigger: GGCGTGATTCCTAACAGGCCACAGACCAGCAGCGGT...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617926.4
ENST00000622493.4
3UTR CAA 72 bp CATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTaGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HCVPCAAGVTCS*EKLVTLQVGWV
Trigger: CACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCAGGTCATAGCAGGTaGAGAGACAAGCTGCGAAGC +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPAGHSR*RDKLRS
Trigger: GCTTCGCAGCTTGTCTCTTCACCTGCTATGACCTGC...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACCCTGTGCTGCTGGAGTaGCATGCTCCTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYPVLLE*HAPWRS
Trigger: ACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGG...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGCATTCCCCTCCATCTTaGACTCTGCAAAAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQHSPPS*TLQKPQ
Trigger: CTGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAATG...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAGTTTGTGTGGAGCAGTaGCAAATATTGTGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAVCVEQ*QILCQH
Trigger: GTGCTGACACAATATTTGTCACTGCTCCACACAAAC...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGAAGCCTGGCCAGACTaGGCGGGTATACTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHREAWPD*AGILWN
Trigger: ATTCCAGAGTATACCCGCTCAGTCTGGCCAGGCTTC...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATAGGATTCAAGTTTATTaGGCTGACCCTGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHRIQVY*ADPGRA
Trigger: TGCTCGACCAGGGTCAGCTCAATAAACTTGAATCCT...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATGCTTACGCCCCTGCTaGAGAACCAGATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPCLRPC*RTRWQS
Trigger: ACTTTGCCATCTGGTTCTTCAGCAGGGGCGTAAGCA...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGTCTCCGAGCTCCTCTaGGCACTCCAGCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPVSELL*ALQLIF
Trigger: GAAGATAAGCTGGAGTGCTCAGAGGAGCTCGGAGAC...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCTGGGGTCAGTGGTTTTaGCCAAGTCTCCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YTRKLYIGGWRSWEQRHIWGQWF*PSLRAP
Trigger: AGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCA...GATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGTGGGGTCAGTGGTTTTaGCCAAGTCTCCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGWGQWF*PSLRAP
Trigger: AGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCA...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAAGGACCACAGCCCTCTTaGTGTCATAGAGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: IAGEETSCEALPLAFLQEGPQPS*CHRGRC
Trigger: ACACCGACCTCTATGACATCAAGAGGGCTGTGGTCC...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGTTAGCCAGTGCATTGTaGGTGGCAGGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRLASAL*VAGSSQ
Trigger: CTGTGAGGAGCCTGCCACTCACAATGCACTGGCTAA...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAAGGATCCCGTGTTTCTaGCAATGCTGTCTGTACCAC +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTRIPCF*QCCLYH
Trigger: GTGGTACAGACAGCATTGTCAGAAACACGGGATCCT...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAGATTCCTGTGCTCGCTaGAGACAGAGTTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRDSCAR*RQSYPE
Trigger: TTCTGGATAACTCTGTCTTCAGCGAGCACAGGAATC...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAAGTGTGCGGTCTGCCTTaGTGGCAGTCAGGATCAACA +
Preference number: 4 (lower is better)
Translates to: IAGEETSCEALPLAFLQEVCGLP*WQSGST
Trigger: TGTTGATCCTGACTGCCATCAAGGCAGACCGCACAC...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGACTTGTGGAAAACGGTaGAGGCCTCCTCATACAGTG +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLTCGKR*RPPHTV
Trigger: CACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGT...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAGCACCTTTGGGATGTTaGCACGGGACCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPAPLGC*HGTRKA
Trigger: AGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGC...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATGCACCTTTGGGATGTTaGCACGGGACCAGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHAPLGC*HGTRKA
Trigger: AGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGC...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGATGATGTCCTTGAACTaGCCCTCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGMMSLN*PSFQAS
Trigger: TGAGGCCTGGAAGGAGGGTCAGTTCAAGGACATCAT...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTATGATGTCCTTGAACTaGCCCTCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSMMSLN*PSFQAS
Trigger: TGAGGCCTGGAAGGAGGGTCAGTTCAAGGACATCAT...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAATGATGTCCTTGAACTaGCCCTCCTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPMMSLN*PSFQAS
Trigger: TGAGGCCTGGAAGGAGGGTCAGTTCAAGGACATCAT...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGCAGCTGACCTGCCTTTaGAAAGAAACTGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRQLTCL*KETDCP
Trigger: TGGACAGTCAGTTTCTTTTCAAAGGCAGGTCAGCTG...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGTTCACCAGGGGCAGCTaGCCTGCCTTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEFTRGS*PAFEKK
Trigger: TTTCTTTTCAAAGGCAGGTCAGCTGCCCCTGGTGAA...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCT +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYILSAGG*VPHSHS
Trigger: AGAGTGTGAATGAGGCACTCAACCACCTGCTGACAG...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAAGCTGCTGAGCCAGGCTaGTGTTGTCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQAAEPG*CCQSCH
Trigger: ATGACAACTTTGACAACATCAGCCTGGCTCAGCAGC...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGGCTGCTGAGCCAGGCTaGTGTTGTCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLAAEPG*CCQSCH
Trigger: ATGACAACTTTGACAACATCAGCCTGGCTCAGCAGC...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTGCTTCTCCAGCTGCTaGGCCAGGCTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRCFSSC*ARLMLS
Trigger: TGACAACATCAGCCTGGCTCAGCAGCTGGAGAAGCA...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAATCGATCGCTGCCTCCTaGCCCACACTGTTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: IAGEETSCEALPLAFLQESIAAS*PTLFLV
Trigger: TACAAGGAACAGTGTGGGTCAGGAGGCAGCGATCGA...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR GCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGTCACATGCTCCTCTTaGTTGCGCAGACTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIVTCSS*LRRLSK
Trigger: CTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGAC...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAAGCTGGGTCTCATTCATaGCCATCAAAATCAAACACG +
Preference number: 4 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQAGSHS*PSKSNT
Trigger: CGTGTTTGATTTTGATGGGCATGAATGAGACCCAGC...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACACCATTGCGTCCCCTGTaGTGCTGGAGTGACATGCTC +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTPLRPL*CWSDML
Trigger: GAGCATGTCACTCCAGCAGCACAGGGGACGCAATGG...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGATGGCTCAGAGGTTaGCGTCATTGGGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRGWLRG*RHWVSA
Trigger: TGCTGAAACCCAATGACGGCAACCTCTGAGCCATCC...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCCTCCATCTTGAACTCTaGAAAAGCCGCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISLHLEL*KSRSMA
Trigger: GGCCATGCTGCGGCTTTTGCAGAGTTCAAGATGGAG...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCTACGGTTCATGCAGATaGACACGCCAGACTCTAGGT +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGYGSCR*TRQTLG
Trigger: ACCTAGAGTCTGGCGTGTGCATCTGCATGAACCGTA...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAACACAAACAACTTCTCTaGCCCAGCCAGGTTACTACG +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQHKQLL*PSQVTT
Trigger: CGTAGTAACCTGGCTGGGGCAGAGAAGTTGTTTGTG...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCCAGGATTCCCTTTGGTaGAGACGCTGCAACTTTGGC +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISQDSLW*RRCNFG
Trigger: GCCAAAGTTGCAGCGTCTGCACCAAAGGGAATCCTG...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGAGCATTCGAGAAAACTaGAGGCCCTGTTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQSIREN*RPCSGL
Trigger: CAGTCCGGAACAGGGCCTGCAGTTTTCTCGAATGCT...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTAGCGGCTCCTCGTCCTaGACTAGCATTCGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYISGSSS*TSIREN
Trigger: GTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCT...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGATCTGCAACCTGGGGTaGATGAACAAGGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPICNLG*MNKVHL
Trigger: GAGATGAACCTTGTTCATGCACCCCAGGTTGCAGAT...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCCACCTCCTTGATCTaGCCTGTCTTACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRSTSLI*PVLQAA
Trigger: GGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGA...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCAGCGGCCCACCACGCTaGTGTCATAGTAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRSGPPR*CHSRHS
Trigger: AGAATGCCTACTATGACAGCAGCGTGGTGGGCCGCT...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCACACAGCAGGCTCATTaGATCTCTCCGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGTQQAH*ISPQTH
Trigger: ATGAGTTTGCGGAGAGATGCAATGAGCCTGCTGTGT...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTGATCCTCCCAGTTGTTaGTCCTGCTGGCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSDPPSC*SCWLTE
Trigger: TTCAGTCAGCCAGCAGGAGCAACAACTGGGAGGATC...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGCAGCGGTCTCCAACCTaGTGGATGTGGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRQRSPT*WMWALL
Trigger: CAACAATGCCCACATCCAGCAGGTTGGAGACCGCTG...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCGCTGTTGTCCACTGCTaGCTGATACTCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNAAVVHC*LILTEV
Trigger: CACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGC...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCGCTGTTGTCCACTGCTaGCTGATACTCACCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSAVVHC*LILTEV
Trigger: CACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGC...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACACAGAAAAGCTCCAGATaGTCCAGCATCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTQKSSR*SSIFCG
Trigger: GCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTG...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGCCAGTTTGTCCACCTTaGTCAGGTACTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: SNSAGRVGGDNAHYTRKLPVCPP*SGTPSS
Trigger: TGATGAGGGAGTACCTGAGCAAGGTGGACAAACTGG...CAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGCGGAAGTTGTACATTaGAGGCTGGCGAAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPAEVVH*RLAKLG
Trigger: TCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGC...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACT +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGTLQVG*VVTTPT
Trigger: AGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAACTCTGCAGGTAGGGTaGGTGGTGACAACGCCCACT +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGETLQVG*VVTTPT
Trigger: AGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGACGTCCCCTGTGCTGCTaGAGTGACATGCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGRPLCC*SDMLLG
Trigger: TCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACG...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAAGGCCTCCCCAGGCTCTaGGATGGCTCAGAGGTTGCC +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQGLPRL*DGSEVA
Trigger: GGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAAACATCTTCATGGGCTaGGAGTCACCTTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLNIFMG*ESPSML
Trigger: GAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTT...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTTATCAAACATCTTCATaGGCTGGGAGTCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPYQTSS*AGSHLP
Trigger: TGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATA...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGGCAGCCCACCAGACTaGTATGTCTATCAAACATCT +
Preference number: 4 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGGSPPD*YVYQTS
Trigger: AGATGTTTGATAGACATACCAGTCTGGTGGGCTGCC...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCAGCATGGCCTTCTATaGGTTGTGAAACCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPQHGLL*VVKPSY
Trigger: ATAGGAAGGTTTCACAACCCATAGAAGGCCATGCTG...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGCAACTTGCCTCCTGTaGGATTACGTACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLATCLL*DYVQQS
Trigger: GCTTTGCTGTACGTAATCCCACAGGAGGCAAGTTGC...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCACAGACGCTGCAACTTTaGCGGCTTCAGCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPQTLQL*RLQHSC
Trigger: GCAGCTATGCTGAAGCCGCCAAAGTTGCAGCGTCTG...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCTCTGGACCGTCTCTCTaGTACGCAGGATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISSGPSL*YAGFPL
Trigger: CAAAGGGAATCCTGCGTACCAGAGAGACGGTCCAGA...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTCTGGACCGTCTCTCTaGTACGCAGGATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRSGPSL*YAGFPL
Trigger: CAAAGGGAATCCTGCGTACCAGAGAGACGGTCCAGA...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCACAGAAAGATCCAGTCTaGGGTGTACCCAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSQKDPV*GVPNLF
Trigger: AAAAAGGTTGGGTACACCCCAGACTGGATCTTTCTG...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCGTCTCCTGGATGGGTTaGTCTCCTCAAGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNAVSWMG*SPQGRE
Trigger: CTCACGTCCTTGAGGAGACCAACCCATCCAGGAGAC...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGGTCTCCTGGATGGGTTaGTCTCCTCAAGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLVSWMG*SPQGRE
Trigger: CTCACGTCCTTGAGGAGACCAACCCATCCAGGAGAC...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACGTCTCCTGGATGGGTTaGTCTCCTCAAGGACGTGAG +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYVSWMG*SPQGRE
Trigger: CTCACGTCCTTGAGGAGACCAACCCATCCAGGAGAC...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCTTCATATCAAACTTGTaGAAAACGGTGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVAFISNL*KTVKAS
Trigger: GGAGGCCTTCACCGTTTTCCACAAGTTTGATATGAA...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATTGCTCGATCAGGACCTaGATTGCTGAGGCATTCATA +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHCSIRT*IAEAFI
Trigger: TATGAATGCCTCAGCAATCCAGGTCCTGATCGAGCA...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATAGTTGTTGCTCCTGCTaGCTGACTGAACAACTTCCA +
Preference number: 4 (lower is better)
Translates to: EGQALSHAPLACADSPRHSCCSC*LTEQLP
Trigger: TGGAAGTTGTTCAGTCAGCCAGCAGGAGCAACAACT...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGCCAACCTGCTGGATGTaGGCATTGTTGGGTCCATTA +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWPTCWM*ALLGPL
Trigger: TAATGGACCCAACAATGCCCACATCCAGCAGGTTGG...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCCGGTCTCCAACCTGCTaGATGTGGGCATTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSRSPTC*MWALLG
Trigger: ACCCAACAATGCCCACATCCAGCAGGTTGGAGACCG...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCAGCCCTCAGCACCTTTaGGATGTTGACACGGGACCA +
Preference number: 4 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLSPQHL*DVDTGP
Trigger: TGGTCCCGTGTCAACATCCCAAAGGTGCTGAGGGCT...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGACACTCTTGTTGTTGTaGCTCTGGACTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTTLLLL*LWTDRR
Trigger: CCTGCGGTCAGTCCAGAGCCACAACAACAAGAGTGT...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCTGCAGCATGCTGCATaGCATCCTTGTAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPLQHAA*HPCRDD
Trigger: ATCATCTCTACAAGGATGCCATGCAGCATGCTGCAG...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACACCTGTGCTGCTGGAGTaGCATGCTCCTTGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTPVLLE*HAPWRS
Trigger: ACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGG...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGACTGAGAGTCCTTTTATaGGGTCCGGTACCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGLRVLL*GPVPPN
Trigger: GTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAG...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATCTGAGAGTCCTTTTATaGGGTCCGGTACCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHLRVLL*GPVPPN
Trigger: GTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAG...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAGCCTTCTATGGGTTGTaGAACCTTCCTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLAFYGL*NLPIHR
Trigger: TCTGTGGATAGGAAGGTTTCACAACCCATAGAAGGC...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGCCTTCTATGGGTTGTaGAACCTTCCTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGAFYGL*NLPIHR
Trigger: TCTGTGGATAGGAAGGTTTCACAACCCATAGAAGGC...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCCATTCCCCTCCATCTTaGACTCTGCAAAAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSHSPPS*TLQKPQ
Trigger: CTGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAATG...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGCTGTCCAACTTCAATaGTGTGCAACTTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPAVQLQ*CATCLL
Trigger: CAGGAGGCAAGTTGCACATCATTGAAGTTGGACAGC...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCGTTTGTGTGGAGCAGTaGCAAATATTGTGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGVCVEQ*QILCQH
Trigger: GTGCTGACACAATATTTGTCACTGCTCCACACAAAC...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTGCTTACGCCCCTGCTaGAGAACCAGATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRCLRPC*RTRWQS
Trigger: ACTTTGCCATCTGGTTCTTCAGCAGGGGCGTAAGCA...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TCAGTGGGGTGGCTCATCATGGTGAGCACAGCATTGTCATACTCCTCGTACTTGGTCTCCGAGCTCCTCTaGGCACTCCAGCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: SVGWLIMVSTALSYSSYLVSELL*ALQLIF
Trigger: GAAGATAAGCTGGAGTGCTCAGAGGAGCTCGGAGAC...CAAGTACGAGGAGTATGACAATGCTGTGCTCACCATGATGAGCCACCCCACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGGCCCTGTTCCGGACTaGTCTTCATTACACCCCTCA +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEGPVPD*SSLHPS
Trigger: TGAGGGGTGTAATGAAGATCAGTCCGGAACAGGGCC...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTAAGGAAGTACACTGCTaGATTAAACTGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: CRLKLVLRRQPLPWPPQAKEVHC*IKLFSM
Trigger: CATGGAAAACAGTTTAATTCAGCAGTGTACTTCCTT...AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGACCTGCACACACAGCTaGAGGTTCTGTCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWTCTHS*RFCLML
Trigger: TAACATCAGACAGAACCTTCAGCTGTGTGTGCAGGT...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAAACCTGCACACACAGCTaGAGGTTCTGTCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQTCTHS*RFCLML
Trigger: TAACATCAGACAGAACCTTCAGCTGTGTGTGCAGGT...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGCTGAAGTTCACGATTaGGCCCAGGAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RTIHIKQPSNHSWGPARVAEVHD*AQEVEE
Trigger: CTCTTCTACTTCCTGGGCTCAATCGTGAACTTCAGC...AACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATCTGGGTCTTGGCTaGAGTTCACGATTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: YTRKLYIGGWRSWEQRHIHLGLG*SSRLSP
Trigger: TGGGCTCAATCGTGAACTTCAGCCAAGACCCAGATG...GATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGTTAGCCAGTGCATTGTaGGTGGCAGGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LCQQVVECLIHTLVVVALLASAL*VAGSSQ
Trigger: CTGTGAGGAGCCTGCCACTCACAATGCACTGGCTAA...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAAGGATGGCCAGCTCAGTaGACATGCCCATGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQGWPAQ*TCPCGP
Trigger: GGGCCCACATGGGCATGTTCACTGAGCTGGCCATCC...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAGCATCTTCTGTGGCTTaGATTTGGAGTAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTASSVA*IWSRGW
Trigger: CCATCCTCTACTCCAAATTCAAGCCACAGAAGATGC...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCT +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLLSAGG*VPHSHS
Trigger: AGAGTGTGAATGAGGCACTCAACCACCTGCTGACAG...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGGCTGCTGAGCCAGGCTaGTGTTGTCAAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTAAEPG*CCQSCH
Trigger: ATGACAACTTTGACAACATCAGCCTGGCTCAGCAGC...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGCTGCATGGCATCCTTTaGAAAGAAACTGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRLHGIL*KETDCP
Trigger: TGGACAGTCAGTTTCTTTTCAAAGGATGCCATGCAG...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS-3UTR GCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGCATGCTCCTCTTGCTTaGGCAGACTCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLHAPLA*ADSPRH
Trigger: ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATG...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCGTCACATGCTCCTCTTaGTTGCGCAGACTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLVTCSS*LRRLSK
Trigger: CTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGAC...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGCTGGGTCTCATTCATaGCCATCAAAATCAAACACG +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRAGSHS*PSKSNT
Trigger: CGTGTTTGATTTTGATGGGCATGAATGAGACCCAGC...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAGCTGCTGGAGTGACATaGTCCTTGGAGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTAAGVT*SLEKLV
Trigger: TACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGC...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAGCTGCTGGAGTGACATaGTCCTTGGAGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLAAGVT*SLEKLV
Trigger: TACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGC...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGTTGCGTCCCCTGTGCTaGTGGAGTGACATGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLELRPLC*WSDMLL
Trigger: AAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAA...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCATCGTGACCTGTGCCTaGTCACCAACTTTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRIVTCA*SPTFSR
Trigger: CCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGAT...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAAATGATCGTGACCTGTaGCTGCTCACCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTNDRDL*LLTNFL
Trigger: GAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATT...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAACTCCATCTTGAACTCTaGAAAAGCCGCAGCATGGCC +
Preference number: 4 (lower is better)
Translates to: IAGEETSCEALPLAFLQELHLEL*KSRSMA
Trigger: GGCCATGCTGCGGCTTTTGCAGAGTTCAAGATGGAG...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGATTTGCTTGGCACATTTaGCCGAAGGTACACACTCAG +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGFAWHI*PKVHTQ
Trigger: CTGAGTGTGTACCTTCGGGCAAATGTGCCAAGCAAA...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGAGCGGCTCCTCGTCCTaGACTAGCATTCGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRSGSSS*TSIREN
Trigger: GTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCT...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGAGCGGCTCCTCGTCCTaGACTAGCATTCGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLSGSSS*TSIREN
Trigger: GTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCT...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACATCCACCTCCTTGATCTaGCCTGTCTTACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTSTSLI*PVLQAA
Trigger: GGCTGCCTGTAAGACAGGGCAGATCAAGGAGGTGGA...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGTAGATTTTAGCCAGTaGATTGTGAGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWVDFSQ*IVSGRL
Trigger: GAGCCTGCCACTCACAATGCACTGGCTAAAATCTAC...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGACCCAGTTGTTGCTCCTaGTGGCTGACTGAACAACTT +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGPSCCS*WLTEQL
Trigger: AAGTTGTTCAGTCAGCCAGCAGGAGCAACAACTGGG...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACAGCGGTCTCCAACCTaGTGGATGTGGGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEQRSPT*WMWALL
Trigger: CAACAATGCCCACATCCAGCAGGTTGGAGACCGCTG...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTACTCCTCCAGCTCATCTaGATGAATGACGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLLLQLI*MNDDVK
Trigger: CTTCACATCGTCATTCATGCAGATGAGCTGGAGGAG...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGACTCCTCCAGCTCATCTaGATGAATGACGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGLLQLI*MNDDVK
Trigger: CTTCACATCGTCATTCATGCAGATGAGCTGGAGGAG...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCCAGAAAAGCTCCAGATaGTCCAGCATCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISQKSSR*SSIFCG
Trigger: GCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTG...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAGGGCCCACCAGTTATTaGCCTTGTACAGATAGGCCG +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTGPTSY*PCTDRP
Trigger: CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCC...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR GCA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAAACTCTTGTCCATCCATaGAGGCAAAGCACACCGAGG +
Preference number: 4 (lower is better)
Translates to: IAGEETSCEALPLAFLQETLVHP*RQSTPR
Trigger: CCTCGGTGTGCTTTGCCTGCATGGATGGACAAGAGT...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCACTCATGATCTTTATCTaGATCACACTAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSLMIFI*ITLKQR
Trigger: CCGCTGCTTTAGTGTGATGCAGATAAAGATCATGAG...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS-3UTR GCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGACTCTGCAGCATGCTaGATGGCATCCTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGDSAAC*MASFEK
Trigger: CTTTTCAAAGGATGCCATGCAGCATGCTGCAGAGTC...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS-3UTR CCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCTCAAGCACCATGTCTaGGCGAAGCAGGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNALKHHV*AKQVIA
Trigger: TGCTATGACCTGCTTCGCCCAGACATGGTGCTTGAG...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCCTCAAGCACCATGTCTaGGCGAAGCAGGTCATAGCA +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRLKHHV*AKQVIA
Trigger: TGCTATGACCTGCTTCGCCCAGACATGGTGCTTGAG...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGACTTAGTGCAATCAGCTaGGTCTCATTCATGCCCATC +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGLSAIS*VSFMPI
Trigger: GATGGGCATGAATGAGACCCAGCTGATTGCACTAAG...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGCTTAGTGCAATCAGCTaGGTCTCATTCATGCCCATC +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLLSAIS*VSFMPI
Trigger: GATGGGCATGAATGAGACCCAGCTGATTGCACTAAG...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGTCGGATCGGAGCCATTaGGTCACTCATGTCAATGAT +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLSDRSH*VTHVND
Trigger: ATCATTGACATGAGTGACCCAATGGCTCCGATCCGA...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGTATCACCTTAGAGGCTaGATTCATGATGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRYHLRG*IHDGTL
Trigger: GAGAGTGCCATCATGAATCCAGCCTCTAAGGTGATA...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGAACATCTTCATGGGCTaGGAGTCACCTTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGNIFMG*ESPSML
Trigger: GAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTT...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGATATCAAACATCTTCATaGGCTGGGAGTCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRYQTSS*AGSHLP
Trigger: TGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATA...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCGCAAAAGCCGCAGCATaGCCTTCTATGGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISAKAAA*PSMGCE
Trigger: TTCACAACCCATAGAAGGCCATGCTGCGGCTTTTGC...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGCAACTTGCCTCCTGTaGGATTACGTACAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQATCLL*DYVQQS
Trigger: GCTTTGCTGTACGTAATCCCACAGGAGGCAAGTTGC...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAACGCAGACCAAGGTCTaGATTCTGAAGCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPTQTKV*ILKHVG
Trigger: ACCAACGTGCTTCAGAATCCAGACCTTGGTCTGCGT...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACAGACGCTGCAACTTTaGCGGCTTCAGCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEQTLQL*RLQHSC
Trigger: GCAGCTATGCTGAAGCCGCCAAAGTTGCAGCGTCTG...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGTCTGGACCGTCTCTCTaGTACGCAGGATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLSGPSL*YAGFPL
Trigger: CAAAGGGAATCCTGCGTACCAGAGAGACGGTCCAGA...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGTTCTTCACACGCTCTaGGTTGTAGCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRVLHTL*VVAAAL
Trigger: GAGAGCAGCTGCTACAACCCAGAGCGTGTGAAGAAC...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGACTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRLQHLL*LEFGVE
Trigger: CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAG...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATCCTCTGTCAGCAGGTaGTTGAGTGCCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPSSVSR*LSASFT
Trigger: TGTGAATGAGGCACTCAACCACCTGCTGACAGAGGA...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CCA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCCTGCAGCATGCTGCATaGCATCCTTGTAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGLQHAA*HPCRDD
Trigger: ATCATCTCTACAAGGATGCCATGCAGCATGCTGCAG...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR CCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCTGCAGCATGCTGCATaGCATCCTGATAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNALQHAA*HPDSPP
Trigger: AGGAGGACTATCAGGATGCCATGCAGCATGCTGCAG...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621271.4
CDS-3UTR TCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGACATTCCCCTCCATCTTaGACTCTGCAAAAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGHSPPS*TLQKPQ
Trigger: CTGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAATG...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGTGCAAAGAGGGTATTaGATTTTCTCACAAACAACT +
Preference number: 4 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWVQRGY*IFSQTT
Trigger: AGTTGTTTGTGAGAAAATTCAATACCCTCTTTGCAC...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTTCAAGTTTATTGAGCTaGCCCTGGTCGAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSSSLLS*PWSSRI
Trigger: AATCCTGCTCGACCAGGGTCAGCTCAATAAACTTGA...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGATGCTTACGCCCCTGCTaGAGAACCAGATGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGCLRPC*RTRWQS
Trigger: ACTTTGCCATCTGGTTCTTCAGCAGGGGCGTAAGCA...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGCAACCTGGGGTGCATaGACAAGGTTCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LCQQVVECLIHTLVVVALATWGA*TRFISN
Trigger: GTTGGAGATGAACCTTGTTCATGCACCCCAGGTTGC...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGCAAGCCACTCGGGATTaGGGAGGTGAGTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEQATRD*GGECGP
Trigger: TGGTCCACACTCACCTCCTCAATCCCGAGTGGCTTG...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGCTGAAGTTCACGATTaGGCCCAGGAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGAEVHD*AQEVEE
Trigger: CTCTTCTACTTCCTGGGCTCAATCGTGAACTTCAGC...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCGCTGAAGTTCACGATTaGGCCCAGGAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRAEVHD*AQEVEE
Trigger: CTCTTCTACTTCCTGGGCTCAATCGTGAACTTCAGC...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGTCTTACAGGCAGCCTaGATGTATTTCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLVLQAA*MYFRCT
Trigger: TGTGCATCTGAAATACATTCAGGCTGCCTGTAAGAC...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAAGGGGAAGCTGGTCTGTaGGCTTGGCCTCCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQGEAGL*AWPPSG
Trigger: TCCTGAAGGAGGCCAAGCTCACAGACCAGCTTCCCC...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGGATTCCTGTGCTCGCTaGAGACAGAGTTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGDSCAR*RQSYPE
Trigger: TTCTGGATAACTCTGTCTTCAGCGAGCACAGGAATC...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGATTCCTGTGCTCGCTaGAGACAGAGTTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPDSCAR*RQSYPE
Trigger: TTCTGGATAACTCTGTCTTCAGCGAGCACAGGAATC...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAACTTGTGGAAAACGGTaGAGGCCTCCTCATACAGTG +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPTCGKR*RPPHTV
Trigger: CACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGT...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGACAGGACCTGGATTGCTaGGGCATTCATATCAAACTT +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGQDLDC*GIHIKL
Trigger: AAGTTTGATATGAATGCCTCAGCAATCCAGGTCCTG...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAACAGGACCTGGATTGCTaGGGCATTCATATCAAACTT +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQQDLDC*GIHIKL
Trigger: AAGTTTGATATGAATGCCTCAGCAATCCAGGTCCTG...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCGCATCTTCTGTGGCTTaGATTTGGAGTAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISASSVA*IWSRGW
Trigger: CCATCCTCTACTCCAAATTCAAGCCACAGAAGATGC...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCAGCTGACCTGCCTTTaGAAAGAAACTGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTQLTCL*KETDCP
Trigger: TGGACAGTCAGTTTCTTTTCAAAGGCAGGTCAGCTG...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR GCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAGTCACATGCTCCTCTTaGTTGCGCAGACTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTVTCSS*LRRLSK
Trigger: CTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGAC...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGCTGCTGGAGTGACATaGTCCTTGGAGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIAAGVT*SLEKLV
Trigger: TACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGC...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAATCGTGACCTGTGCCTaGTCACCAACTTTCTCTCGG +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGIVTCA*SPTFSR
Trigger: CCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGAT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAATGATCGTGACCTGTaGCTGCTCACCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISNDRDL*LLTNFL
Trigger: GAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATT...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGACATGATGGCACTCTCTaGAGAGATAGGCCGTCGGAT +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGHDGTL*RDRPSD
Trigger: ATCCGACGGCCTATCTCTGCAGAGAGTGCCATCATG...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTTTTGCTGAGCCGAGATaGCTACGAGCAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFFAEPR*LRAAAT
Trigger: AGTGGCTGCTGCTCGTAGGCATCTCGGCTCAGCAAA...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGAGAGTAGAGCTGCATTaGTCCAACCACACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQRVELH*SNHTVL
Trigger: CAAAACCGTGTGGTTGGAGCAATGCAGCTCTACTCT...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTAGAGTAGAGCTGCATTaGTCCAACCACACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIRVELH*SNHTVL
Trigger: CAAAACCGTGTGGTTGGAGCAATGCAGCTCTACTCT...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGCCAACTTCAATGATGTaGAACTTGCCTCCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGPTSMM*NLPPVG
Trigger: TCCCACAGGAGGCAAGTTGCACATCATTGAAGTTGG...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCAGGTTGGTTTCCCGCTaGAGGCTGTCCAACTTCAAT +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRRLVSR*RLSNFN
Trigger: ATTGAAGTTGGACAGCCTGCAGCGGGAAACCAACCT...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAAGGTTGGTTTCCCGCTaGAGGCTGTCCAACTTCAAT +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPRLVSR*RLSNFN
Trigger: ATTGAAGTTGGACAGCCTGCAGCGGGAAACCAACCT...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCATACGGTTCATGCAGATaGACACGCCAGACTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPYGSCR*TRQTLG
Trigger: ACCTAGAGTCTGGCGTGTGCATCTGCATGAACCGTA...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGCATAGCTGCCCTGTaGAAAGAGGGTATTGAATTT +
Preference number: 4 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRSIAAL*KEGIEF
Trigger: AAATTCAATACCCTCTTTGCACAGGGCAGCTATGCT...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGACGGCTTCAGCATAGCTaGCCTGTGCAAAGAGGGTAT +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGRLQHS*PVQRGY
Trigger: ATACCCTCTTTGCACAGGGCAGCTATGCTGAAGCCG...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTTTGCTTGGCACATTTaGCCGAAGGTACACACTCAG +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHFAWHI*PKVHTQ
Trigger: CTGAGTGTGTACCTTCGGGCAAATGTGCCAAGCAAA...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAAACACTGGATCACTTTaGTTGGCACATTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEANTGSL*LAHLPE
Trigger: TTCGGGCAAATGTGCCAAGCAAAGTGATCCAGTGTT...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAATCTCAATGTACCTCTaGAGGTTGTTGCGGTATAAA +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMAISMYL*RLLRYK
Trigger: TTTATACCGCAACAACCTGCAGAGGTACATTGAGAT...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCGCTCGCGATGTCCAGTaGGTCATAGTTGTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLAARDVQ*VIVVQA
Trigger: CGCCTGGACAACTATGACGCACTGGACATCGCGAGC...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTCCAGGTTTCCAATGTaGTCGATCAGGACCTGGATT +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHSRFPM*SIRTWI
Trigger: AATCCAGGTCCTGATCGAGCACATTGGAAACCTGGA...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTCCAGGTTTCCAATGTaGTCGATCAGGACCTGGATT +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRSRFPM*SIRTWI
Trigger: AATCCAGGTCCTGATCGAGCACATTGGAAACCTGGA...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGACTCCTCCAGCTCATCTaGATGAATGACGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGLLQLI*MNDDVK
Trigger: CTTCACATCGTCATTCATGCAGATGAGCTGGAGGAG...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTTAGTGCAATCAGCTaGGTCTCATTCATGCCCATC +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTLSAIS*VSFMPI
Trigger: GATGGGCATGAATGAGACCCAGCTGATTGCACTAAG...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATCTTAGTGCAATCAGCTaGGTCTCATTCATGCCCATC +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHLSAIS*VSFMPI
Trigger: GATGGGCATGAATGAGACCCAGCTGATTGCACTAAG...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGATATCAAACATCTTCATaGGCTGGGAGTCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGYQTSS*AGSHLP
Trigger: TGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATA...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCACAGCATGGCCTTCTATaGGTTGTGAAACCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAQHGLL*VVKPSY
Trigger: ATAGGAAGGTTTCACAACCCATAGAAGGCCATGCTG...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACGCAAAAGCCGCAGCATaGCCTTCTATGGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYAKAAA*PSMGCE
Trigger: TTCACAACCCATAGAAGGCCATGCTGCGGCTTTTGC...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCAGACCAAGGTCTaGATTCTGAAGCACGTTGGT +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYTQTKV*ILKHVG
Trigger: ACCAACGTGCTTCAGAATCCAGACCTTGGTCTGCGT...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCATACTCTGGAATTTCTaGACCGTCTCTCTGGTACGC +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRILWNF*TVSLVR
Trigger: GCGTACCAGAGAGACGGTCCAGAAATTCCAGAGTAT...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGTTTCAGATGCACATCTaGGTCTTGGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLFQMHI*VLAEVH
Trigger: GTGAACTTCAGCCAAGACCCAGATGTGCATCTGAAA...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGCAATTAGCTGTCTCCTaGATGGGTTGGTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGQLAVS*MGWSPQ
Trigger: TTGAGGAGACCAACCCATCCAGGAGACAGCTAATTG...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCCAATTAGCTGTCTCCTaGATGGGTTGGTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRQLAVS*MGWSPQ
Trigger: TTGAGGAGACCAACCCATCCAGGAGACAGCTAATTG...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCGCTGTCTGTACCACCTaGTCAATTAGCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRAVCTT*SISCLL
Trigger: CAGGAGACAGCTAATTGACCAGGTGGTACAGACAGC...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATAGTTGTTGCTCCTGCTaGCTGACTGAACAACTTCCA +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHSCCSC*LTEQLP
Trigger: TGGAAGTTGTTCAGTCAGCCAGCAGGAGCAACAACT...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCCCAACCTGCTGGATGTaGGCATTGTTGGGTCCATTA +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSPTCWM*ALLGPL
Trigger: TAATGGACCCAACAATGCCCACATCCAGCAGGTTGG...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGTGCTATAGAGCAGCTTaGCAGCCTCGTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRCYRAA*QPRTFP
Trigger: AGGGAATGTACGAGGCTGCCAAGCTGCTCTATAGCA...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCATGCTATAGAGCAGCTTaGCAGCCTCGTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPCYRAA*QPRTFP
Trigger: AGGGAATGTACGAGGCTGCCAAGCTGCTCTATAGCA...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGTCCTCTGTCAGCAGGTaGTTGAGTGCCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRSSVSR*LSASFT
Trigger: TGTGAATGAGGCACTCAACCACCTGCTGACAGAGGA...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCACTGCAGCATGCTGCATaGCATCCTTGTAGAGATGAT +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPLQHAA*HPCRDD
Trigger: ATCATCTCTACAAGGATGCCATGCAGCATGCTGCAG...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000617926.4
CDS-3UTR TCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAATCTCTCGGATACATATaGACTTGTCAGATTCCATGG +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQSLGYI*TCQIPW
Trigger: CCATGGAATCTGACAAGTTCATATGTATCCGAGAGA...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCAATATTAAAGATCTaGAGTGTCTTCCCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SNFWASSASRDSAACCMASILKI*SVFPAF
Trigger: GAAAGCTGGGAAGACACTTCAGATCTTTAATATTGA...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCGCCTTCTATGGGTTGTaGAACCTTCCTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRAFYGL*NLPIHR
Trigger: TCTGTGGATAGGAAGGTTTCACAACCCATAGAAGGC...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGAGGATTCAAGTTTATTaGGCTGACCCTGGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGRIQVY*ADPGRA
Trigger: TGCTCGACCAGGGTCAGCTCAATAAACTTGAATCCT...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTAAGGAAGTACACTGCTaGATTAAACTGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPKEVHC*IKLFSM
Trigger: CATGGAAAACAGTTTAATTCAGCAGTGTACTTCCTT...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCACCTGCACACACAGCTaGAGGTTCTGTCTGATGTTA +
Preference number: 4 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLTCTHS*RFCLML
Trigger: TAACATCAGACAGAACCTTCAGCTGTGTGTGCAGGT...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATGGCCTTTGTAACTCTTaGAGGATTCAAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHGLCNS*RIQRAP
Trigger: TGGAGCTCTTTGAATCCTTCAAGAGTTACAAAGGCC...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAGCTGAAGTTCACGATTaGGCCCAGGAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGAEVHD*AQEVEE
Trigger: CTCTTCTACTTCCTGGGCTCAATCGTGAACTTCAGC...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GTTGTAGCAGCTGCTCTCTCGGCATATCCTCTCCACCTCCTTGATCTGCCCTGTGTCTTACAGGCAGCCTaGATGTATTTCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: VVAAALSAYPLHLLDLPCVLQAA*MYFRCT
Trigger: TGTGCATCTGAAATACATTCAGGCTGCCTGTAAGAC...ACAGGGCAGATCAAGGAGGTGGAGAGGATATGCCGAGAGAGCAGCTGCTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAGTCTTACAGGCAGCCTaGATGTATTTCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPVLQAA*MYFRCT
Trigger: TGTGCATCTGAAATACATTCAGGCTGCCTGTAAGAC...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCAGGACCTGGATTGCTaGGGCATTCATATCAAACTT +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTQDLDC*GIHIKL
Trigger: AAGTTTGATATGAATGCCTCAGCAATCCAGGTCCTG...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACCAGCTGACCTGCCTTTaGAAAGAAACTGACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYQLTCL*KETDCP
Trigger: TGGACAGTCAGTTTCTTTTCAAAGGCAGGTCAGCTG...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR TCA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGTTCACCAGGGGCAGCTaGCCTGCCTTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEFTRGS*PAFEKK
Trigger: TTTCTTTTCAAAGGCAGGTCAGCTGCCCCTGGTGAA...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAATTCACCAGGGGCAGCTaGCCTGCCTTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEFTRGS*PAFEKK
Trigger: TTTCTTTTCAAAGGCAGGTCAGCTGCCCCTGGTGAA...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR GCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACACAAACAACTTCTCTaGCCCAGCCAGGTTACTACG +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEHKQLL*PSQVTT
Trigger: CGTAGTAACCTGGCTGGGGCAGAGAAGTTGTTTGTG...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAAGCATAGCTGCCCTGTaGAAAGAGGGTATTGAATTT +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLSIAAL*KEGIEF
Trigger: AAATTCAATACCCTCTTTGCACAGGGCAGCTATGCT...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTTTGCTTGGCACATTTaGCCGAAGGTACACACTCAG +
Preference number: 4 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRFAWHI*PKVHTQ
Trigger: CTGAGTGTGTACCTTCGGGCAAATGTGCCAAGCAAA...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCGAATTGGCCTGTTTCTaGAAAACACTGGATCACTTT +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGELACF*KTLDHF
Trigger: AAAGTGATCCAGTGTTTTGCAGAAACAGGCCAATTC...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCATCTGCAACCTGGGGTaGATGAACAAGGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: YTRKLYIGGWRSWEQRHIICNLG*MNKVHL
Trigger: GAGATGAACCTTGTTCATGCACCCCAGGTTGCAGAT...GATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGATCTGCAACCTGGGGTaGATGAACAAGGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGICNLG*MNKVHL
Trigger: GAGATGAACCTTGTTCATGCACCCCAGGTTGCAGAT...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTCCACCAGGGCCTGCGTaGCCAGCTGCTCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLPPGPA*PAARGT
Trigger: AGTACCACGAGCAGCTGGGCACGCAGGCCCTGGTGG...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTATTCTGTAGATTCCTGTaGTCGCTGAAGACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLFCRFL*SLKTEL
Trigger: TAACTCTGTCTTCAGCGAGCACAGGAATCTACAGAA...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCTCCAGGTTTCCAATGTaGTCGATCAGGACCTGGATT +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRSRFPM*SIRTWI
Trigger: AATCCAGGTCCTGATCGAGCACATTGGAAACCTGGA...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGACACAGCAGGCTCATTaGATCTCTCCGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGTQQAH*ISPQTH
Trigger: ATGAGTTTGCGGAGAGATGCAATGAGCCTGCTGTGT...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGCAGAAAAGCTCCAGATaGTCCAGCATCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEQKSSR*SSIFCG
Trigger: GCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTG...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACACTCATGATCTTTATCTaGATCACACTAAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTLMIFI*ITLKQR
Trigger: CCGCTGCTTTAGTGTGATGCAGATAAAGATCATGAG...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617926.4
ENST00000622493.4
CDS-3UTR CCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAACATCTTCATGGGCTaGGAGTCACCTTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGNIFMG*ESPSML
Trigger: GAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGGGCAGCCCACCAGACTaGTATGTCTATCAAACATCT +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLGSPPD*YVYQTS
Trigger: AGATGTTTGATAGACATACCAGTCTGGTGGGCTGCC...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCGGCAGCCCACCAGACTaGTATGTCTATCAAACATCT +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSGSPPD*YVYQTS
Trigger: AGATGTTTGATAGACATACCAGTCTGGTGGGCTGCC...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGATTCTTTACAAAAGGTTaGTTTCCCGCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGFFTKG*FPAAGC
Trigger: ACAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAA...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTTCTTTACAAAAGGTTaGTTTCCCGCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHFFTKG*FPAAGC
Trigger: ACAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAA...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGAGAGGTTGGTTTGTGTaGAGCAGTGACAAATATTGT +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPRGWFV*SSDKYC
Trigger: ACAATATTTGTCACTGCTCCACACAAACCAACCTCT...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAGAGGTTGGTTTGTGTaGAGCAGTGACAAATATTGT +
Preference number: 4 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGRGWFV*SSDKYC
Trigger: ACAATATTTGTCACTGCTCCACACAAACCAACCTCT...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGAATAATTCCAGAGGTTaGTTTGTGTGGAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLENNSRG*FVWSSD
Trigger: GTCACTGCTCCACACAAACCAACCTCTGGAATTATT...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCTGGATCACTTTGCTTaGCACATTTGCCCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLLDHFA*HICPKV
Trigger: TACCTTCGGGCAAATGTGCCAAGCAAAGTGATCCAG...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCAAAATGTCCACAATCTaGCTAATGTTGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRKMSTI*LMLASG
Trigger: GCCGCTGGCCAACATTAGCCAGATTGTGGACATTTT...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGTATAGGACAAGGTCATaGACAAAGCCAAAACGATCA +
Preference number: 4 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPYRTRS*TKPKRS
Trigger: TGATCGTTTTGGCTTTGTCCATGACCTTGTCCTATA...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCTGCTCGATCAGGACCTaGATTGCTGAGGCATTCATA +
Preference number: 4 (lower is better)
Translates to: YTRKLYIGGWRSWEQRHICSIRT*IAEAFI
Trigger: TATGAATGCCTCAGCAATCCAGGTCCTGATCGAGCA...GATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTCTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSLQHLL*LEFGVE
Trigger: CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAG...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CCACGAGGTTGTGCCTCCAGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTGTCATTGATGAGCAGTaGTTTGTAATCCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: PRGCASRPAQAPCLGEAGVIDEQ*FVIQIE
Trigger: TTCTATTTGGATTACAAACCACTGCTCATCAATGAC...ACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCTGGAGGCACAACCTCGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGTCCTCTGTCAGCAGGTaGTTGAGTGCCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: LCQQVVECLIHTLVVVALSSVSR*LSASFT
Trigger: TGTGAATGAGGCACTCAACCACCTGCTGACAGAGGA...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCACTGCAGCATGCTGCATaGCATCCTTTGAAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPLQHAA*HPLKRN
Trigger: GTTTCTTTTCAAAGGATGCCATGCAGCATGCTGCAG...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS-3UTR TCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTTCCTCAACACAAACTaGCAGTACCTGTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHFLNTN*QYLSLF
Trigger: AAAAAGGGACAGGTACTGTCAGTTTGTGTTGAGGAA...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTGTCTCCTCAAGGACGTaGGCCCAGAGCTCCGGATCC +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLVSSRT*AQSSGS
Trigger: GGATCCGGAGCTCTGGGCTCACGTCCTTGAGGAGAC...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGGTTGCTCCTGCTGGCTaGCTGAACAACTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEVAPAG*LNNFQV
Trigger: TACCTGGAAGTTGTTCAGTCAGCCAGCAGGAGCAAC...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTTTCACCAGGGGCAGCTaGCCTGCCTTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFFTRGS*PAFEKK
Trigger: TTTCTTTTCAAAGGCAGGTCAGCTGCCCCTGGTGAA...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCT +
Preference number: 4 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLALSAGG*VPHSHS
Trigger: AGAGTGTGAATGAGGCACTCAACCACCTGCTGACAG...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGCTGGGTCTCATTCATaGCCATCAAAATCAAACACG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRAGSHS*PSKSNT
Trigger: CGTGTTTGATTTTGATGGGCATGAATGAGACCCAGC...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGCTGGGTCTCATTCATaGCCATCAAAATCAAACACG +
Preference number: 4 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGAGSHS*PSKSNT
Trigger: CGTGTTTGATTTTGATGGGCATGAATGAGACCCAGC...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGCTGGAGTGACATaGTCCTTGGAGAAGTTAGTA +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEAAGVT*SLEKLV
Trigger: TACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGC...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCATTTAATATTTATGATTaGCAAGAGGCTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSFNIYD*QEAESP
Trigger: AGGACTCTCAGCCTCTTGGCAATCATAAATATTAAA...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAAGAGTAGAGCTGCATTaGTCCAACCACACGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTRVELH*SNHTVL
Trigger: CAAAACCGTGTGGTTGGAGCAATGCAGCTCTACTCT...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGAACACTGGATCACTTTaGTTGGCACATTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLNTGSL*LAHLPE
Trigger: TTCGGGCAAATGTGCCAAGCAAAGTGATCCAGTGTT...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTGCCTGCGTGCCCAGCTaGTCGTGGTACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLACVPS*SWYLEA
Trigger: GGCCTCTAAGTACCACGAGCAGCTGGGCACGCAGGC...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGATCTCAATGTACCTCTaGAGGTTGTTGCGGTATAAA +
Preference number: 4 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLISMYL*RLLRYK
Trigger: TTTATACCGCAACAACCTGCAGAGGTACATTGAGAT...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGTTCTGTAGATTCCTGTaGTCGCTGAAGACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTFCRFL*SLKTEL
Trigger: TAACTCTGTCTTCAGCGAGCACAGGAATCTACAGAA...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTCCACGTCCGGGTGCTaGTGGCCTTGCGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLSTSGC*WPCGCC
Trigger: ACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGA...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTAGGAGGATCTGCGCCATaGCTGGTGCGGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLGGSAP*LVRDLG
Trigger: GCCGAGGTCCCGCACCAGCCATGGCGCAGATCCTCC...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGAATAATTCCAGAGGTTaGTTTGTGTGGAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGNNSRG*FVWSSD
Trigger: GTCACTGCTCCACACAAACCAACCTCTGGAATTATT...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTACGCAGGATTCCCTTTaGTGCAGACGCTGCAACTTT +
Preference number: 4 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFTQDSL*CRRCNF
Trigger: AAAGTTGCAGCGTCTGCACCAAAGGGAATCCTGCGT...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAATACTCTGGAATTTCTaGACCGTCTCTCTGGTACGC +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTILWNF*TVSLVR
Trigger: GCGTACCAGAGAGACGGTCCAGAAATTCCAGAGTAT...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGTGTACCCAACCTTTTTaGCATAGAGCACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWCTQPF*HRAQFS
Trigger: AGAAAATTGTGCTCTATGCCAAAAAGGTTGGGTACA...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCCAGAAAGATCCAGTCTaGGGTGTACCCAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRQKDPV*GVPNLF
Trigger: AAAAAGGTTGGGTACACCCCAGACTGGATCTTTCTG...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAAAATGTCCACAATCTaGCTAATGTTGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGKMSTI*LMLASG
Trigger: GCCGCTGGCCAACATTAGCCAGATTGTGGACATTTT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAAAAATGTCCACAATCTaGCTAATGTTGGCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEKMSTI*LMLASG
Trigger: GCCGCTGGCCAACATTAGCCAGATTGTGGACATTTT...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAAGGTCATGGACAACCCTCCAATCACAGCTaGGGTCCGGCTAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: QCTSAGCCGINIGQGHGQPSNHS*GPARVD
Trigger: GTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGG...TTGTCCATGACCTTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CCA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACACAATTAGCTGTCTCCTaGATGGGTTGGTCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTQLAVS*MGWSPQ
Trigger: TTGAGGAGACCAACCCATCCAGGAGACAGCTAATTG...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGCTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRLQHLL*LEFGVE
Trigger: CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAG...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGTCTCTCGGATACATATaGACTTGTCAGATTCCATGG +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRSLGYI*TCQIPW
Trigger: CCATGGAATCTGACAAGTTCATATGTATCCGAGAGA...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGTTTGTGTGGAGCAGTaGCAAATATTGTGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEVCVEQ*QILCQH
Trigger: GTGCTGACACAATATTTGTCACTGCTCCACACAAAC...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCTTCCTCAACACAAACTaGCAGTACCTGTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLFLNTN*QYLSLF
Trigger: AAAAAGGGACAGGTACTGTCAGTTTGTGTTGAGGAA...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTAGTGCAAAGAGGGTATTaGATTTTCTCACAAACAACT +
Preference number: 4 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLVQRGY*IFSQTT
Trigger: AGTTGTTTGTGAGAAAATTCAATACCCTCTTTGCAC...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAAAGGAAGTACACTGCTaGATTAAACTGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTKEVHC*IKLFSM
Trigger: CATGGAAAACAGTTTAATTCAGCAGTGTACTTCCTT...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TCAGTGGGGTGGCTCATCATGGTGAGCACAGCATTGTCATACTCCTCGTACTTGGTCTTACAGGCAGCCTaGATGTATTTCAGATGCACA +
Preference number: 4 (lower is better)
Translates to: SVGWLIMVSTALSYSSYLVLQAA*MYFRCT
Trigger: TGTGCATCTGAAATACATTCAGGCTGCCTGTAAGAC...CAAGTACGAGGAGTATGACAATGCTGTGCTCACCATGATGAGCCACCCCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGAGCATAGCTGCCCTGTaGAAAGAGGGTATTGAATTT +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLSIAAL*KEGIEF
Trigger: AAATTCAATACCCTCTTTGCACAGGGCAGCTATGCT...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGAACACTGGATCACTTTaGTTGGCACATTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLENTGSL*LAHLPE
Trigger: TTCGGGCAAATGTGCCAAGCAAAGTGATCCAGTGTT...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAATTGGCCTGTTTCTaGAAAACACTGGATCACTTT +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQELACF*KTLDHF
Trigger: AAAGTGATCCAGTGTTTTGCAGAAACAGGCCAATTC...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCAATCTCAATGTACCTCTaGAGGTTGTTGCGGTATAAA +
Preference number: 4 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPISMYL*RLLRYK
Trigger: TTTATACCGCAACAACCTGCAGAGGTACATTGAGAT...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TTCCTCAGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTATCTCAATGTACCTCTaGAGGTTGTTGCGGTATAAA +
Preference number: 4 (lower is better)
Translates to: FLRTIHIKQPSNHSWGPAISMYL*RLLRYK
Trigger: TTTATACCGCAACAACCTGCAGAGGTACATTGAGAT...AGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR GCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCTTCTGTAGATTCCTGTaGTCGCTGAAGACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRFCRFL*SLKTEL
Trigger: TAACTCTGTCTTCAGCGAGCACAGGAATCTACAGAA...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTTTTCCTGGCCATCTaGAGAAATTTAACTAGATCC +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAFFLAI*RNLTRS
Trigger: GGATCTAGTTAAATTTCTGCAGATGGCCAGGAAAAA...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCCCAGTTTGTCCACCTTaGTCAGGTACTCCCTCATCA +
Preference number: 4 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLAPVCPP*SGTPSS
Trigger: TGATGAGGGAGTACCTGAGCAAGGTGGACAAACTGG...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGTATCACCTTAGAGGCTaGATTCATGATGGCACTCTC +
Preference number: 4 (lower is better)
Translates to: LCQQVVECLIHTLVVVALYHLRG*IHDGTL
Trigger: GAGAGTGCCATCATGAATCCAGCCTCTAAGGTGATA...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGTTCTTTACAAAAGGTTaGTTTCCCGCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LCQQVVECLIHTLVVVALFFTKG*FPAAGC
Trigger: ACAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAA...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCAATAATTCCAGAGGTTaGTTTGTGTGGAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNANNSRG*FVWSSD
Trigger: GTCACTGCTCCACACAAACCAACCTCTGGAATTATT...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAATGTACCCAACCTTTTTaGCATAGAGCACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQCTQPF*HRAQFS
Trigger: AGAAAATTGTGCTCTATGCCAAAAAGGTTGGGTACA...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTTATAGGACAAGGTCATaGACAAAGCCAAAACGATCA +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSYRTRS*TKPKRS
Trigger: TGATCGTTTTGGCTTTGTCCATGACCTTGTCCTATA...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGTATAGGACAAGGTCATaGACAAAGCCAAAACGATCA +
Preference number: 4 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTYRTRS*TKPKRS
Trigger: TGATCGTTTTGGCTTTGTCCATGACCTTGTCCTATA...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCGCTGTCTGTACCACCTaGTCAATTAGCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLAAVCTT*SISCLL
Trigger: CAGGAGACAGCTAATTGACCAGGTGGTACAGACAGC...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGCCAACCTGCTGGATGTaGGCATTGTTGGGTCCATTA +
Preference number: 4 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEPTCWM*ALLGPL
Trigger: TAATGGACCCAACAATGCCCACATCCAGCAGGTTGG...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGELQHLL*LEFGVE
Trigger: CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAG...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAAACACTCTTGTTGTTGTaGCTCTGGACTGACCGCAGG +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQTLLLL*LWTDRR
Trigger: CCTGCGGTCAGTCCAGAGCCACAACAACAAGAGTGT...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGATCTCTCGGATACATATaGACTTGTCAGATTCCATGG +
Preference number: 4 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGSLGYI*TCQIPW
Trigger: CCATGGAATCTGACAAGTTCATATGTATCCGAGAGA...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTTCAATATTAAAGATCTaGAGTGTCTTCCCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSSILKI*SVFPAF
Trigger: GAAAGCTGGGAAGACACTTCAGATCTTTAATATTGA...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGTGCAAAGAGGGTATTaGATTTTCTCACAAACAACT +
Preference number: 4 (lower is better)
Translates to: VIAGEETSCEALPLAFLQVQRGY*IFSQTT
Trigger: AGTTGTTTGTGAGAAAATTCAATACCCTCTTTGCAC...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TCAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAAGGTCATGGACAGGACCACAGCCCTCTTaGTGTCATAGAGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: SMYLCRLLRYKYRTRSWTGPQPS*CHRGRC
Trigger: ACACCGACCTCTATGACATCAAGAGGGCTGTGGTCC...TGTCCATGACCTTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR TCA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGCCTTTGTAACTCTTaGAGGATTCAAAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFGLCNS*RIQRAP
Trigger: TGGAGCTCTTTGAATCCTTCAAGAGTTACAAAGGCC...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCGCATCTTCTGTGGCTTaGATTTGGAGTAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLAASSVA*IWSRGW
Trigger: CCATCCTCTACTCCAAATTCAAGCCACAGAAGATGC...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTTAATATTTATGATTaGCAAGAGGCTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAFNIYD*QEAESP
Trigger: AGGACTCTCAGCCTCTTGGCAATCATAAATATTAAA...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGTTTAATATTTATGATTaGCAAGAGGCTGAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEFNIYD*QEAESP
Trigger: AGGACTCTCAGCCTCTTGGCAATCATAAATATTAAA...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGACTGAAGCACGTTGGTTaGATAATTCACAATGTTATC +
Preference number: 4 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGLKHVG*IIHNVI
Trigger: GATAACATTGTGAATTATGCAACCAACGTGCTTCAG...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTAGCCTGCGTGCCCAGCTaGTCGTGGTACTTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLACVPS*SWYLEA
Trigger: GGCCTCTAAGTACCACGAGCAGCTGGGCACGCAGGC...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGCTCCTCCAGCTCATCTaGATGAATGACGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVELLQLI*MNDDVK
Trigger: CTTCACATCGTCATTCATGCAGATGAGCTGGAGGAG...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCAGAGGTTGGTTTGTGTaGAGCAGTGACAAATATTGT +
Preference number: 4 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNARGWFV*SSDKYC
Trigger: ACAATATTTGTCACTGCTCCACACAAACCAACCTCT...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTGTACCCAACCTTTTTaGCATAGAGCACAATTTTCT +
Preference number: 4 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHCTQPF*HRAQFS
Trigger: AGAAAATTGTGCTCTATGCCAAAAAGGTTGGGTACA...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTTTTCAGATGCACATCTaGGTCTTGGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFFQMHI*VLAEVH
Trigger: GTGAACTTCAGCCAAGACCCAGATGTGCATCTGAAA...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAATGCTATAGAGCAGCTTaGCAGCCTCGTACATTCCCT +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQCYRAA*QPRTFP
Trigger: AGGGAATGTACGAGGCTGCCAAGCTGCTCTATAGCA...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGGTCATTGATGAGCAGTaGTTTGTAATCCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEVIDEQ*FVIQIE
Trigger: TTCTATTTGGATTACAAACCACTGCTCATCAATGAC...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGTCATTGATGAGCAGTaGTTTGTAATCCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLEVIDEQ*FVIQIE
Trigger: TTCTATTTGGATTACAAACCACTGCTCATCAATGAC...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTTTCCTCAACACAAACTaGCAGTACCTGTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFFLNTN*QYLSLF
Trigger: AAAAAGGGACAGGTACTGTCAGTTTGTGTTGAGGAA...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR TCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAATCAAGTTTATTGAGCTaGCCCTGGTCGAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQSSLLS*PWSSRI
Trigger: AATCCTGCTCGACCAGGGTCAGCTCAATAAACTTGA...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTGGCCCTGTTCCGGACTaGTCTTCATTACACCCCTCA +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLGPVPD*SSLHPS
Trigger: TGAGGGGTGTAATGAAGATCAGTCCGGAACAGGGCC...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTATCGGGATTGAGGAGGTaGGTGTGGACCACAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLSGLRR*VWTTAL
Trigger: GAGGGCTGTGGTCCACACTCACCTCCTCAATCCCGA...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGCTGAAGCACGTTGGTTaGATAATTCACAATGTTATC +
Preference number: 4 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLLKHVG*IIHNVI
Trigger: GATAACATTGTGAATTATGCAACCAACGTGCTTCAG...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR GCA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCTTTTTCCTGGCCATCTaGAGAAATTTAACTAGATCC +
Preference number: 4 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRFFLAI*RNLTRS
Trigger: GGATCTAGTTAAATTTCTGCAGATGGCCAGGAAAAA...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGATTCTGAAGCACGTTaGTTGCATAATTCACAATGT +
Preference number: 4 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRDSEAR*LHNSQC
Trigger: ACATTGTGAATTATGCAACCAACGTGCTTCAGAATC...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GCACGTAGATCTCAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAAGTTCTTCACACGCTCTaGGTTGTAGCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ARRSQCTSAGCCGINIGQVLHTL*VVAAAL
Trigger: GAGAGCAGCTGCTACAACCCAGAGCGTGTGAAGAAC...TTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTGAGATCTACGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTACCCTCCAATCACAGCTaGGGTCCGGCTAGGGTTGAC +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLPSNHS*GPARVD
Trigger: GTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGG...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGCTCCAGCATCTTCTGTaGCTTGAATTTGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVELQHLL*LEFGVE
Trigger: CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAG...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CCA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCATTGATGAGCAGTaGTTTGTAATCCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPVIDEQ*FVIQIE
Trigger: TTCTATTTGGATTACAAACCACTGCTCATCAATGAC...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR GCA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGTTTTTCCTGGCCATCTaGAGAAATTTAACTAGATCC +
Preference number: 4 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEFFLAI*RNLTRS
Trigger: GGATCTAGTTAAATTTCTGCAGATGGCCAGGAAAAA...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGATTCTGAAGCACGTTaGTTGCATAATTCACAATGT +
Preference number: 4 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEDSEAR*LHNSQC
Trigger: ACATTGTGAATTATGCAACCAACGTGCTTCAGAATC...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTGTTCTTCACACGCTCTaGGTTGTAGCAGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLVLHTL*VVAAAL
Trigger: GAGAGCAGCTGCTACAACCCAGAGCGTGTGAAGAAC...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp TTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCGTCATTGATGAGCAGTaGTTTGTAATCCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: LYIGGWRSWEQRHIHRGSVIDEQ*FVIQIE
Trigger: TTCTATTTGGATTACAAACCACTGCTCATCAATGAC...GCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR TCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTGCATCTTCTGTGGCTTaGATTTGGAGTAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLASSVA*IWSRGW
Trigger: CCATCCTCTACTCCAAATTCAAGCCACAGAAGATGC...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTAGCAGACAGCATGGCATaGAGACACTCCACAGAATCC +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLADSMA*RHSTES
Trigger: GGATTCTGTGGAGTGTCTGCATGCCATGCTGTCTGC...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp GCACGTAGATCTCAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAATTTCAGATGCACATCTaGGTCTTGGCTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: ARRSQCTSAGCCGINIGQFQMHI*VLAEVH
Trigger: GTGAACTTCAGCCAAGACCCAGATGTGCATCTGAAA...TTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTGAGATCTACGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTGCTCGATCAGGACCTaGATTGCTGAGGCATTCATA +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLCSIRT*IAEAFI
Trigger: TATGAATGCCTCAGCAATCCAGGTCCTGATCGAGCA...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAACTGAAGCACGTTGGTTaGATAATTCACAATGTTATC +
Preference number: 4 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQLKHVG*IIHNVI
Trigger: GATAACATTGTGAATTATGCAACCAACGTGCTTCAG...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR GCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTACAGAAAAGCTCCAGATaGTCCAGCATCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLQKSSR*SSIFCG
Trigger: GCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTG...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTAGCTGTCTGTACCACCTaGTCAATTAGCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLAVCTT*SISCLL
Trigger: CAGGAGACAGCTAATTGACCAGGTGGTACAGACAGC...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CCTTCTGCACGTAGATCTCAATGTACCTCTGCAGGTTGTTGCGGTATAAATATATATAGGACAAGGTCATaGACAAAGCCAAAACGATCA +
Preference number: 4 (lower is better)
Translates to: PSARRSQCTSAGCCGINIYRTRS*TKPKRS
Trigger: TGATCGTTTTGGCTTTGTCCATGACCTTGTCCTATA...TATATTTATACCGCAACAACCTGCAGAGGTACATTGAGATCTACGTGCAGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTCATATCAAACTTGTaGAAAACGGTGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLFISNL*KTVKAS
Trigger: GGAGGCCTTCACCGTTTTCCACAAGTTTGATATGAA...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CCA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTACAGAAAGATCCAGTCTaGGGTGTACCCAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLQKDPV*GVPNLF
Trigger: AAAAAGGTTGGGTACACCCCAGACTGGATCTTTCTG...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR TCA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTCAATATTAAAGATCTaGAGTGTCTTCCCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLSILKI*SVFPAF
Trigger: GAAAGCTGGGAAGACACTTCAGATCTTTAATATTGA...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS CCA 90 bp CCCTGCTGCCCACTGGTGAAACGGAGATGCCACCTCCGGAGGCTCTaGAGGGGACAGGTGGCTCACGGAGGCGCAGGTGCCCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: PCCPLVKRRCHLRRL*RGQVAHGGAGALGD
Trigger: GTCTCCCAGGGCACCTGCGCCTCCGTGAGCCACCTGTCCCCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp GCTGGGCCATTCCCTATGCCCTGCTGCCCACTGGTGAAACGGAGATaGCACCTCCGGAGGCTCTGGAGGGGACAGGTGGCTCACGGAGGC +
Preference number: 5 (lower is better)
Translates to: AGPFPMPCCPLVKRR*HLRRLWRGQVAHGG
Trigger: GCCTCCGTGAGCCACCTGTCCCCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp GAGTCACTGCCAGGGTTGGGTCATGCCACACAGGGGCCGGGGAGCTaGAGCCGGCCCGGCACCTACCTTGCTCAGGTACTCCCTCATCAC +
Preference number: 5 (lower is better)
Translates to: ESLPGLGHATQGPGS*SRPGTYLAQVLPHH
Trigger: GTGATGAGGGAGTACCTGAGCAAGGTAGGTGCCGGGCCGGCTGCAGCTCCCCGGCCCCTGTGTGGCATGACCCAACCCTGGCAGTGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp CTGGACCCATGGCTGGGCCATTCCCTATGCCCTGCTGCCCACTGGTaGAACGGAGATGCCACCTCCGGAGGCTCTGGAGGGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: LDPWLGHSLCPAAHW*NGDATSGGSGGDRW
Trigger: CCACCTGTCCCCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp TCCTCACTCTTCCCTGAGGCTTCACCAGGCACTGACCCCACCCACTaGCAGAGAGCGAGGCGGCAGCACTGCACTAGAGGGGCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SSLFPEASPGTDPTH*QRARRQHCTRGAAA
Trigger: TGCTGCCGCCCCTCTAGTGCAGTGCTGCCGCCTCGCTCTCTGGCAGTGGGTGGGGTCAGTGCCTGGTGAAGCCTCAGGGAAGAGTGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp TGCAGCAAGGCATGGAGAGGTGAAGCCTCGGTAGCTGGGCTGAGATaGAACGCCAGGTGGGGCCCCCAGAGCTTCCCAGTGGGCACTGGG +
Preference number: 5 (lower is better)
Translates to: CSKAWRGEASVAGLR*NARWGPQSFPVGTG
Trigger: CCCAGTGCCCACTGGGAAGCTCTGGGGGCCCCACCTGGCGTTCCATCTCAGCCCAGCTACCGAGGCTTCACCTCTCCATGCCTTGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp CCCCTGAGGACGCCCAGTGCCCACATCTGCATGGACCCGATGTGCTaGGCTGGCTCCGGAAAGAAGTCTCCCCCGCTGGCATGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PLRTPSAHICMDPMC*AGSGKKSPPLACCS
Trigger: TGAGCAGCATGCCAGCGGGGGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412649.5
ENST00000538828.1
CDS GCA 90 bp TGGAGCAAGCCTGGACCCATGGCTGGGCCATTCCCTATGCCCTGCTaGCCACTGGTGAAACGGAGATGCCACCTCCGGAGGCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: WSKPGPMAGPFPMPC*PLVKRRCHLRRLWR
Trigger: CCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTTGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CTGTGGAGCAAGCCTGGACCCATGGCTGGGCCATTCCCTATGCCCTaGTGCCCACTGGTGAAACGGAGATGCCACCTCCGGAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LWSKPGPMAGPFPMP*CPLVKRRCHLRRLW
Trigger: CCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTTGCTCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CTTCCACGTCCGGGTGCTGCTGGCCTTGCGGCTGTTGTCCACTGCTaGCTGATACTCACCGAGGTGAACCAAGGTGGAAGCCAGGCGGGC +
Preference number: 5 (lower is better)
Translates to: LPRPGAAGLAAVVHC*LILTEVNQGGSQAG
Trigger: GCCCGCCTGGCTTCCACCTTGGTTCACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAGGAGGCGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: SSNWPGGGSSSQSEAPRRRGSCT*EAGEVG
Trigger: CCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCG...CCTCCTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCAGCTGGTCTGTGAGCTaGGCCTCCTTCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFSWSVS*ASFRKF
Trigger: GAACTTCCTGAAGGAGGCCAAGCTCACAGACCAGCT...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS GCA 90 bp CTGCATGGCATCCTGCAGCCAAGGCAAATGCTTGCTTGGGCATCCTaGAGGCAGAGGCTTTGTGCCTGCAGCAGCTGGGCCGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LHGILQPRQMLAWAS*RQRLCACSSWAGGQ
Trigger: CTGCCCTCCGGCCCAGCTGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CTCCTTCCACGTCCGGGTGCTGCTGGCCTTGCGGCTGTTGTCCACTaGTGCCTGATACTCACCGAGGTGAACCAAGGTGGAAGCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLPRPGAAGLAAVVH*CLILTEVNQGGSQA
Trigger: CGCCTGGCTTCCACCTTGGTTCACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS GCA 90 bp TGCAGCCCTCAGCACCTGGACAAGGAGGTCAGGGTCGGCTTGTGCTaGACGTGGCCACGGCTGCCAGACTGCAAGGAGTACACGGTACCT +
Preference number: 5 (lower is better)
Translates to: CSPQHLDKEVRVGLC*TWPRLPDCKEYTVP
Trigger: AGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCAGGTGCTGAGGGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CCA 90 bp CTGCATGCCTGCCATCGCCTGCAGCACACACCTCTGAGTTCCGTTTaGGAGACCCCTGAGGACGCCCAGTGCCCACATCTGCATGGACCC +
Preference number: 5 (lower is better)
Translates to: LHACHRLQHTPLSSV*ETPEDAQCPHLHGP
Trigger: GGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGTGTGTGCTGCAGGCGATGGCAGGCATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp AGGGCAGGGAGTGGCACTAGACTCCACCAAGGACTTCCTGCGCTGTaGAGCAAGCCTGGACCCATGGCTGGGCCATTCCCTATGCCCTGC +
Preference number: 5 (lower is better)
Translates to: RAGSGTRLHQGLPAL*SKPGPMAGPFPMPC
Trigger: GCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTTGCTCCACAGCGCAGGAAGTCCTTGGTGGAGTCTAGTGCCACTCCCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp CTTGCTTGGGCATCCTGCAGGCAGAGGCTTTGTGCCTGCAGCAGCTaGGCCGGAGGGCAGGGAGTGGCACTAGACTCCACCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: LAWASCRQRLCACSS*AGGQGVALDSTKDF
Trigger: GAAGTCCTTGGTGGAGTCTAGTGCCACTCCCTGCCCTCCGGCCCAGCTGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp GTGGGGGAACCAGGGCCCTTGTCAATCCAACCAGTCCATGTCCCCTaGCAGCCCACGAATCTCAGGCCACGTAGCCAGGGCTGTCCCTTC +
Preference number: 5 (lower is better)
Translates to: VGEPGPLSIQPVHVP*QPTNLRPRSQGCPF
Trigger: GAAGGGACAGCCCTGGCTACGTGGCCTGAGATTCGTGGGCTGCCAGGGGACATGGACTGGTTGGATTGACAAGGGCCCTGGTTCCCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS-3UTR CAA 90 bp CCACGAGGTTGTGCCTCCAGGCCAGCTCAAGCACCATGTCTGGGCGAAGCAGGTGCCAAGTCCACGAGGTaGTGCCTCCAGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PRGCASRPAQAPCLGEAGAKSTR*CLQASS
Trigger: TGAGCTGGCCTGGAGGCACAACCTCGTGGACTTGGC...ACCTGCTTCGCCCAGACATGGTGCTTGAGCTGGCCTGGAGGCACAACCTCGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGCGGCTAAAGCTGGTCTaGCGCCGTCAGCCTCTACCC +
Preference number: 5 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWRLKLV*RRQPLP
Trigger: GGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCG...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS TCA 90 bp CCATCGCCTGCAGCACACACCTCTGAGTTCCGTTTGGGAGACCCCTaGGGACGCCCAGTGCCCACATCTGCATGGACCCGATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: PSPAAHTSEFRLGDP*GRPVPTSAWTRCAE
Trigger: CTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGTGTGTGCTGCAGGCGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp GCAGATGGGATGGGGTCACACTGTCCTACAGGAGGGCAACGGCCTTaGATGGACTCTGGGATGGCCTTTATCAGGGGCTGGGCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: ADGMGSHCPTGGQRP*MDSGMAFIRGWAAP
Trigger: GGGGGCTGCCCAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAGGACAGTGTGACCCCATCCCATCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp GCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTaGAGCCAAGGCAAATGCTTGCTTGGGCATCCTGCAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ASSASRDSAACCMAS*SQGKCLLGHPAGRG
Trigger: GCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp GAGGACGCCCAGTGCCCACATCTGCATGGACCCGATGTGCTGAGCTaGCTCCGGAAAGAAGTCTCCCCCGCTGGCATGCTGCTCATCGAT +
Preference number: 5 (lower is better)
Translates to: EDAQCPHLHGPDVLS*LRKEVSPAGMLLID
Trigger: ATCGATGAGCAGCATGCCAGCGGGGGAGACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412649.5
ENST00000538828.1
CDS CCA 90 bp GCACAGGCTGCTCTGAGGAAGGCACTGATGGGAGTTTGGGGGTTGTaGGGCTGCTGCAGAGGTGCTGCACTCAGGTCCATGGAGCGTGTG +
Preference number: 5 (lower is better)
Translates to: AQAALRKALMGVWGL*GCCRGAALRSMERV
Trigger: CACACGCTCCATGGACCTGAGTGCAGCACCTCTGCAGCAGCCCCACAACCCCCAAACTCCCATCAGTGCCTTCCTCAGAGCAGCCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp CCACCAAGGACTTCCTGCGCTGTGGAGCAAGCCTGGACCCATGGCTaGGCCATTCCCTATGCCCTGCTGCCCACTGGTGAAACGGAGATG +
Preference number: 5 (lower is better)
Translates to: PPRTSCAVEQAWTHG*AIPYALLPTGETEM
Trigger: CATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTTGCTCCACAGCGCAGGAAGTCCTTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp CCTCCTCTGGATACAGGGACACTGCCACTTACCGACCTGCAGGGCTaGGGCCATGTGCAGGGAACACTGTCTGCTTCTGGCTCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: PPLDTGTLPLTDLQG*GHVQGTLSASGSGQ
Trigger: CTGGCCAGAGCCAGAAGCAGACAGTGTTCCCTGCACATGGCCCCAGCCCTGCAGGTCGGTAAGTGGCAGTGTCCCTGTATCCAGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp GAGATGGAACGCCAGGTGGGGCCCCCAGAGCTTCCCAGTGGGCACTaGGGCAGTCAGTTGTTACAGGCTGTGCATGTGGCCTGCTTATGG +
Preference number: 5 (lower is better)
Translates to: EMERQVGPPELPSGH*GSQLLQAVHVACLW
Trigger: CCATAAGCAGGCCACATGCACAGCCTGTAACAACTGACTGCCCCAGTGCCCACTGGGAAGCTCTGGGGGCCCCACCTGGCGTTCCATCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp CCTCAGCACCTGGACAAGGAGGTCAGGGTCGGCTTGTGCTGCACGTaGCCACGGCTGCCAGACTGCAAGGAGTACACGGTACCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PQHLDKEVRVGLCCT*PRLPDCKEYTVPLG
Trigger: TCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCAGGTGCTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS-3UTR CAA 90 bp TCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAGGCGCCCAGGAGGGCATTCCCCTCCATCTaGAACTCTGCAAAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: SSNWPGGGSSSQSEAPRRAFPSI*NSAKAA
Trigger: TGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAATGC...CCTCCTGGGCGCCTCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCCGGGTGCTGCTGGCCTaGCGGCTGTTGTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGRVLLA*RLLSTA
Trigger: AGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCG...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS TCA 90 bp ATCTGTCTCCCTGCCGTGCCCTCCACCGGCCCAGCCTACCCTTGCTaGCTTGTCTTCCACATGTGCCTAAAGTGGGCCCTGCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: ICLPAVPSTGPAYPC*LVFHMCLKWALLCS
Trigger: GGAACAGAGCAGGGCCCACTTTAGGCACATGTGGAAGACAAGTCAGCAAGGGTAGGCTGGGCCGGTGGAGGGCACGGCAGGGAGACAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CACACACCTCTGAGTTCCGTTTGGGAGACCCCTGAGGACGCCCAGTaGCCACATCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAA +
Preference number: 5 (lower is better)
Translates to: HTPLSSVWETPEDAQ*PHLHGPDVLSWLRK
Trigger: TTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp GCTGCTCTGAGGAAGGCACTGATGGGAGTTTGGGGGTTGTGGGGCTaGTGCAGAGGTGCTGCACTCAGGTCCATGGAGCGTGTGACACCA +
Preference number: 5 (lower is better)
Translates to: AALRKALMGVWGLWG*CRGAALRSMERVTP
Trigger: TGGTGTCACACGCTCCATGGACCTGAGTGCAGCACCTCTGCAGCAGCCCCACAACCCCCAAACTCCCATCAGTGCCTTCCTCAGAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp GGCCAAGTCCTCCTCTGGATACAGGGACACTGCCACTTACCGACCTaGAGGGCTGGGGCCATGTGCAGGGAACACTGTCTGCTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GQVLLWIQGHCHLPT*RAGAMCREHCLLLA
Trigger: AGCCAGAAGCAGACAGTGTTCCCTGCACATGGCCCCAGCCCTGCAGGTCGGTAAGTGGCAGTGTCCCTGTATCCAGAGGAGGACTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp TGCAGCATGCTGCATGGCATCCTGCAGCCAAGGCAAATGCTTGCTTaGGCATCCTGCAGGCAGAGGCTTTGTGCCTGCAGCAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: CSMLHGILQPRQMLA*ASCRQRLCACSSWA
Trigger: GGCCCAGCTGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp AGCTACCACCAACCGTATGCTAACAGCTGCACCCCCAGACGCCACTaGGAGCTCCTCAGGGAGCTGGGATTGCCAGCCACCTCACTGTCA +
Preference number: 5 (lower is better)
Translates to: SYHQPYANSCTPRRH*ELLRELGLPATSLS
Trigger: TGACAGTGAGGTGGCTGGCAATCCCAGCTCCCTGAGGAGCTCCCAGTGGCGTCTGGGGGTGCAGCTGTTAGCATACGGTTGGTGGTAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp CATCCATGCAGGCAAAGCACACCTCCTTCCACGTCCGGGTGCTGCTaGCCTTGCGGCTGTTGTCCACTGCTGCCTGATACTCACCGAGGT +
Preference number: 5 (lower is better)
Translates to: HPCRQSTPPSTSGCC*PCGCCPLLPDTHRG
Trigger: ACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGGAGGTGTGCTTTGCCTGCATGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCACAATCTGGCTAATGTaGGCCAGCGGCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGTIWLM*ASGSSS
Trigger: GGACGAGGAGCCGCTGGCCAACATTAGCCAGATTGT...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACGGGTGCTGCTGGCCTaGCGGCTGTTGTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLRVLLA*RLLSTA
Trigger: AGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCG...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGCGGGTGCTGCTGGCCTaGCGGCTGTTGTCCACTGCT +
Preference number: 5 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLRVLLA*RLLSTA
Trigger: AGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCG...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS GCA 90 bp CGCGACTCTGCAGCATGCTGCATGGCATCCTGCAGCCAAGGCAAATaGTTGCTTGGGCATCCTGCAGGCAGAGGCTTTGTGCCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: RDSAACCMASCSQGK*LLGHPAGRGFVPAA
Trigger: TGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGTCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp TGGACAAGGAGGTCAGGGTCGGCTTGTGCTGCACGTGGCCACGGCTaGCAGACTGCAAGGAGTACACGGTACCTTTGGGATGTTGACACG +
Preference number: 5 (lower is better)
Translates to: WTRRSGSACAARGHG*QTARSTRYLWDVDT
Trigger: CGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CCA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATaGCATCCTGCAGCCAAGGCAAATGCTTGCTTGGGCATCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TSGPAQHPATLQHAA*HPAAKANACLGILQ
Trigger: CTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp CACATACCACACGTGCCGCCTGTAGGGAGTTGCCATCCACTGTGGTaGGGGAACCAGGGCCCTTGTCAATCCAACCAGTCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: HIPHVPPVGSCHPLW*GNQGPCQSNQSMSP
Trigger: AGGGGACATGGACTGGTTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGGTATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS-3UTR CAA 90 bp CCAGTGCCCACATCTGCATGGACCCGATGTGCTGAGCTGGCTCCGGAAAGAAGTGCGAAGCACTCCCTCTaGCCTTCCTCCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: PVPTSAWTRCAELAPERSAKHSL*PSSRNH
Trigger: GTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC...ACTTCTTTCCGGAGCCAGCTCAGCACATCGGGTCCATGCAGATGTGGGCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CAA 90 bp GGCCAGCTCAGTGAACATGCCCATGTGGGCCCGCTCCAGGCCCAGGGCCGCTTCATTAATTCCAAGGTTTaGGAGCTGGAAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GQLSEHAHVGPLQAQGRFINSKV*ELEVLL
Trigger: CAGGAGCACTTCCAGCTCCAAAACCTTGGAATTAAT...GAAGCGGCCCTGGGCCTGGAGCGGGCCCACATGGGCATGTTCACTGAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCTCCAACCACACGGTTTaGCTGAGCCGAGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGSNHTV*LSRDAY
Trigger: GTAGGCATCTCGGCTCAGCAAAACCGTGTGGTTGGA...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCATGGGGTCAGTGGTTTaGACCAAGTCTCCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGMGSVV*TKSPSS
Trigger: GGAGCTCGGAGACTTGGTCAAAACCACTGACCCCAT...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCAGCTGGTCTGTGAGCTaGGCCTCCTTCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGSWSVS*ASFRKF
Trigger: GAACTTCCTGAAGGAGGCCAAGCTCACAGACCAGCT...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCACGTGTGCGGTCTGCCTaGATGGCAGTCAGGATCAAC +
Preference number: 5 (lower is better)
Translates to: SNFWASSASRDSAACCMARVRSA*MAVRIN
Trigger: GTTGATCCTGACTGCCATCAAGGCAGACCGCACACG...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGTTTCTGGAGCTGGGCTaGGGCCAGCTGACTCCACAC +
Preference number: 5 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWFLELG*GQLTPH
Trigger: GTGTGGAGTCAGCTGGCCCAAGCCCAGCTCCAGAAA...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGATTTCTGGAGCTGGGCTaGGGCCAGCTGACTCCACAC +
Preference number: 5 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRFLELG*GQLTPH
Trigger: GTGTGGAGTCAGCTGGCCCAAGCCCAGCTCCAGAAA...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS TCA 90 bp CGCTGCCTCCTGACCCACACTGTTCCTACAAAGGCACCAGGATTCTaGCCCTCAGGTGAGAGCTCCAGGTGCCTTTGGGTCTCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: RCLLTHTVPTKAPGF*PSGESSRCLWVSAL
Trigger: CAAAGCGGAGACCCAAAGGCACCTGGAGCTCTCACCTGAGGGTCAGAATCCTGGTGCCTTTGTAGGAACAGTGTGGGTCAGGAGGCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp GGTGAAAGTGGAGTGGAAGGTCAGGACACAGGGCCTCCAGGAGAATaGCAGTGGAGGAGGTGCACATGGGCAGATGTGGAGTGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GESGVEGQDTGPPGE*QWRRCTWADVEWLS
Trigger: GCTGAGCCACTCCACATCTGCCCATGTGCACCTCCTCCACTGTCATTCTCCTGGAGGCCCTGTGTCCTGACCTTCCACTCCACTTTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp AAGCACGTGAGCACCCGCTTGACAGAGTGCAGTCCGGCCTCTAGGTaGAAGTGGAGTGGAAGGTCAGGACACAGGGCCTCCAGGAGAATG +
Preference number: 5 (lower is better)
Translates to: KHVSTRLTECSPASR*KWSGRSGHRASRRM
Trigger: CATTCTCCTGGAGGCCCTGTGTCCTGACCTTCCACTCCACTTTCACCTAGAGGCCGGACTGCACTCTGTCAAGCGGGTGCTCACGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp ACTCTGCAGCATGCTGCATGGCATCCTGCAGCCAAGGCAAATGCTTaGTTGGGCATCCTGCAGGCAGAGGCTTTGTGCCTGCAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLQHAAWHPAAKANA*LGILQAEALCLQQL
Trigger: CAGCTGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTaGATGGCATCCTGCAGCCAAGGCAAATGCTTGCTTGGGCATCCT +
Preference number: 5 (lower is better)
Translates to: SNFWASSASRDSAAC*MASCSQGKCLLGHP
Trigger: AGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CCCCAACCCTTGAGAGTCATCAGGGAGTCTCACTCAGGCATGCTATaGAGATGGGATGGGGTCACACTGTCCTACAGGAGGGCAACGGCC +
Preference number: 5 (lower is better)
Translates to: PQPLRVIRESHSGML*RWDGVTLSYRRATA
Trigger: GGCCGTTGCCCTCCTGTAGGACAGTGTGACCCCATCCCATCTGCATAGCATGCCTGAGTGAGACTCCCTGATGACTCTCAAGGGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp AACCACATACCACACGTGCCGCCTGTAGGGAGTTGCCATCCACTGTaGTGGGGGAACCAGGGCCCTTGTCAATCCAACCAGTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: NHIPHVPPVGSCHPL*WGNQGPCQSNQSMS
Trigger: GGACATGGACTGGTTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGGTATGTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS-3UTR CAA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGCGAAGCACTCCCTCTaGCCTTCCTCCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLAKHSL*PSSRNH
Trigger: GTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAGCCAAGTCCACGAGGTaGTGCCTCCAGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGAKSTR*CLQASS
Trigger: TGAGCTGGCCTGGAGGCACAACCTCGTGGACTTGGC...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAACATGCTCCTCTTGCTaGCGCAGACTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SNFWASSASRDSAACCMATCSSC*RRLSKA
Trigger: TGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGT...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCTGTCACATGCTCCTCTaGCTTGCGCAGACTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPCHMLL*LAQTLQ
Trigger: TTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACA...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTCGGCTAAAGCTGGTCTaGCGCCGTCAGCCTCTACCC +
Preference number: 5 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSRLKLV*RRQPLP
Trigger: GGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCG...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTCGGCTAAAGCTGGTCTaGCGCCGTCAGCCTCTACCC +
Preference number: 5 (lower is better)
Translates to: SAGRVGGDNAHYTRKLYIRLKLV*RRQPLP
Trigger: GGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCG...AATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTTCCAACCACACGGTTTaGCTGAGCCGAGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPSNHTV*LSRDAY
Trigger: GTAGGCATCTCGGCTCAGCAAAACCGTGTGGTTGGA...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCAAAAAGGGTGGCAGGCTaGGCATTCCCCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SNFWASSASRDSAACCMAKRVAG*AFPSIL
Trigger: CAAGATGGAGGGGAATGCCAAGCCTGCCACCCTTTT...TGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCTACGCAGGATTCCCTTaGGTGCAGACGCTGCAACTT +
Preference number: 5 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPYAGFP*VQTLQL
Trigger: AAGTTGCAGCGTCTGCACCAAAGGGAATCCTGCGTA...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGACGTGTGCGGTCTGCCTaGATGGCAGTCAGGATCAAC +
Preference number: 5 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRRVRSA*MAVRIN
Trigger: GTTGATCCTGACTGCCATCAAGGCAGACCGCACACG...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQCEAEL*SIHAGK
Trigger: TTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCA...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCAGCACCTTTGGGATGTaGACACGGGACCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGSTFGM*TRDQKS
Trigger: GCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGCT...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTGCCTCATTCACACTCTaGTTGTTGTGGCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: CRLKLVLRRQPLPWPPQAASFTL*LLWLWT
Trigger: AGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGC...AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCTCTGTCAGCAGGTGGTaGAGTGCCTCATTCACACTC +
Preference number: 5 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVASVSRW*SASFTL
Trigger: GAGTGTGAATGAGGCACTCAACCACCTGCTGACAGA...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS TCA 90 bp AAGAAGTCTCCCCCGCTGGCATGCTGCTCATCGATCGCTGCCTCCTaGCCCACACTGTTCCTACAAAGGCACCAGGATTCTGACCCTCAG +
Preference number: 5 (lower is better)
Translates to: KKSPPLACCSSIAAS*PTLFLQRHQDSDPQ
Trigger: CTGAGGGTCAGAATCCTGGTGCCTTTGTAGGAACAGTGTGGGTCAGGAGGCAGCGATCGATGAGCAGCATGCCAGCGGGGGAGACTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp AATCTCAGGCCACGTAGCCAGGGCTGTCCCTTCCTCCCCAACCCTTaGGAGTCATCAGGGAGTCTCACTCAGGCATGCTATGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: NLRPRSQGCPFLPNP*ESSGSLTQACYADG
Trigger: CCCATCTGCATAGCATGCCTGAGTGAGACTCCCTGATGACTCTCAAGGGTTGGGGAGGAAGGGACAGCCCTGGCTACGTGGCCTGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 90 bp TCTCCCAGCACTGCTGTGTGGTGTCAGCTGAGCACCAGCTCAAGCTaGCAATCAGCTCACACCCCCATGCCACTGACTGGGAAACCCCTT +
Preference number: 5 (lower is better)
Translates to: SPSTAVWCQLSTSSS*QSAHTPMPLTGKPL
Trigger: AAGGGGTTTCCCAGTCAGTGGCATGGGGGTGTGAGCTGATTGTCAGCTTGAGCTGGTGCTCAGCTGACACCACACAGCAGTGCTGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CTGCATACCACAAACCACATACCACACGTGCCGCCTGTAGGGAGTTaGCATCCACTGTGGTGGGGGAACCAGGGCCCTTGTCAATCCAAC +
Preference number: 5 (lower is better)
Translates to: LHTTNHIPHVPPVGS*HPLWWGNQGPCQSN
Trigger: GTTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGGTATGTGGTTTGTGGTATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CTCCTCATACAGTGCGCTGCTGACAGCGATGCTCGCGATGTCCAGTaGGTCATAGTTGTCCAGGCGGCTGATGTACTCCATGACCCGTGT +
Preference number: 5 (lower is better)
Translates to: LLIQCAADSDARDVQ*VIVVQAADVLHDPC
Trigger: ACACGGGTCATGGAGTACATCAGCCGCCTGGACAACTATGACGCACTGGACATCGCGAGCATCGCTGTCAGCAGCGCACTGTATGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp GCACGTGGCCACGGCTGCCAGACTGCAAGGAGTACACGGTACCTTTaGGATGTTGACACGGGACCAGAAAAGCTCCAGATGCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: ARGHGCQTARSTRYL*DVDTGPEKLQMLQH
Trigger: ATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS-3UTR CAA 90 bp AAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAGCGAAGCACTCCCTCTaGCCTTCCTCCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: KLVTLQVGWVVTTPTTRGAKHSL*PSSRNH
Trigger: GTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC...TCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATGCGAAGCACTCCCTCTaGCCTTCCTCCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHAKHSL*PSSRNH
Trigger: GTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGCCAAGTCCACGAGGTaGTGCCTCCAGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGAKSTR*CLQASS
Trigger: TGAGCTGGCCTGGAGGCACAACCTCGTGGACTTGGC...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACACGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTRGSCT*EAGEVG
Trigger: CCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCG...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCACGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEARGSCT*EAGEVG
Trigger: CCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCG...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGGGGATGGCTCAGAGGTaGCCGTCATTGGGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEGMAQR*PSLGFS
Trigger: GCTGAAACCCAATGACGGCAACCTCTGAGCCATCCC...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGACAGTCCAGTCTCTGTaGTCGGCTAAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWTVQSL*SAKAGL
Trigger: AAGACCAGCTTTAGCCGACAACAGAGACTGGACTGT...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTTCAATGATGTGCAACTaGCCTCCTGTGGGATTACGT +
Preference number: 5 (lower is better)
Translates to: CRLKLVLRRQPLPWPPQASMMCN*PPVGLR
Trigger: ACGTAATCCCACAGGAGGCAAGTTGCACATCATTGA...AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCACTGGATCACTTTGCTaGGCACATTTGCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGTGSLC*AHLPEG
Trigger: ACCTTCGGGCAAATGTGCCAAGCAAAGTGATCCAGT...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAACACACAGCAGGCTCATaGCATCTCTCCGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQHTAGS*HLSANS
Trigger: TGAGTTTGCGGAGAGATGCAATGAGCCTGCTGTGTG...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAAGCACCTTTGGGATGTaGACACGGGACCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSSTFGM*TRDQKS
Trigger: GCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGCT...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCTTCGACGTTGGCAACCTaGGTAATGATGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CRLKLVLRRQPLPWPPQASTLAT*VMMSLN
Trigger: GTTCAAGGACATCATTACCAAGGTTGCCAACGTCGA...AGCCTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGGCCTCATTCACACTCTaGTTGTTGTGGCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQASFTL*LLWLWT
Trigger: AGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGC...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAATCCAAGGCATCCAGTTaGTCCACCTTGCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQSKASS*STLLRY
Trigger: GTACCTGAGCAAGGTGGACAAACTGGATGCCTTGGA...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS GCA 90 bp TCCTCTTGCTTGCGCAGACTCTCCAAGGCATCCAGTTTGTCCACCTaGAAGGAGGCAAAAGCACGTGAGCACCCGCTTGACAGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSCLRRLSKASSLST*KEAKAREHPLDRVQ
Trigger: CTGCACTCTGTCAAGCGGGTGCTCACGTGCTTTTGCCTCCTTGCAGGTGGACAAACTGGATGCCTTGGAGAGTCTGCGCAAGCAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp CTCCGGAAAGAAGTCTCCCCCGCTGGCATGCTGCTCATCGATCGCTaGCTCCTGACCCACACTGTTCCTTGTAGAGATGATCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: LRKEVSPAGMLLIDR*LLTHTVPCRDDPSC
Trigger: GCAAGAAGGATCATCTCTACAAGGAACAGTGTGGGTCAGGAGGCAGCGATCGATGAGCAGCATGCCAGCGGGGGAGACTTCTTTCCGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAGCCAAGTCCACGAGGTaGTGCCTCCAGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGAKSTR*CLQASS
Trigger: TGAGCTGGCCTGGAGGCACAACCTCGTGGACTTGGC...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGCCAAGTCCACGAGGTaGTGCCTCCAGGCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEAKSTR*CLQASS
Trigger: TGAGCTGGCCTGGAGGCACAACCTCGTGGACTTGGC...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGACATGCTCCTCTTGCTaGCGCAGACTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLETCSSC*RRLSKA
Trigger: TGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGT...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCACATGCTCCTCTTGCTaGCGCAGACTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGTCSSC*RRLSKA
Trigger: TGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGT...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCGGAGTGACATGCTCCTaGGAGAAGTTAGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGGVTCS*EKLVTL
Trigger: CAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCC...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGGATGGCTCAGAGGTaGCCGTCATTGGGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRGMAQR*PSLGFS
Trigger: GCTGAAACCCAATGACGGCAACCTCTGAGCCATCCC...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCTCCAACCACACGGTTTaGCTGAGCCGAGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGSNHTV*LSRDAY
Trigger: GTAGGCATCTCGGCTCAGCAAAACCGTGTGGTTGGA...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CCGCTCCAGGCCCAGGGCCGCTTCCAACAGCAAGATCAGCTCCTCAAAGTAGCCTCAATGATGTGCAACTaGCCTCCTGTGGGATTACGT +
Preference number: 5 (lower is better)
Translates to: PLQAQGRFQQQDQLLKVASMMCN*PPVGLR
Trigger: ACGTAATCCCACAGGAGGCAAGTTGCACATCATTGA...GGCTACTTTGAGGAGCTGATCTTGCTGTTGGAAGCGGCCCTGGGCCTGGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATACAATCTGGCTAATGTaGGCCAGCGGCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHTIWLM*ASGSSS
Trigger: GGACGAGGAGCCGCTGGCCAACATTAGCCAGATTGT...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCATCCTCTCCACCTCCTaGATCTGCCCTGTCTTACAG +
Preference number: 5 (lower is better)
Translates to: QSTSSSPPITAGVRLGLTILSTS*ICPVLQ
Trigger: CTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGAT...GGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CAA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGATCCTCTCCACCTCCTaGATCTGCCCTGTCTTACAG +
Preference number: 5 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWILSTS*ICPVLQ
Trigger: CTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGAT...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp ATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTAGGGTTGACCTTAGCTGGTCTGTGAGCTaGGCCTCCTTCAGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: IHIKQPSNHSWGPARVDLSWSVS*ASFRKF
Trigger: GAACTTCCTGAAGGAGGCCAAGCTCACAGACCAGCT...AAGGTCAACCCTAGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CAA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCTTCTCATTGCACACCTaGATGAGCTCAAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPFSLHT*MSSRSH
Trigger: GTGTGACCTTGAGCTCATCAAGGTGTGCAATGAGAA...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAAACTAGATCCTCCCAGTaGTTGCTCCTGCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQTRSSQ*LLLLAD
Trigger: GTCAGCCAGCAGGAGCAACAACTGGGAGGATCTAGT...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPCEAEL*SIHAGK
Trigger: TTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCA...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCATGGTGAGCACAGCATaGTCATACTCCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: EAGEVGSRGISIGEAGRGMVSTA*SYSSYL
Trigger: CAAGTACGAGGAGTATGACAATGCTGTGCTCACCAT...GCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGATGGTGAGCACAGCATaGTCATACTCCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWMVSTA*SYSSYL
Trigger: CAAGTACGAGGAGTATGACAATGCTGTGCTCACCAT...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCTCATTCACACTCTTGTaGTTGTGGCTCTGGACTGAC +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGSFTLL*LWLWTD
Trigger: GTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGA...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp CCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCTCTGTCAGCAGGTGGTaGAGTGCCTCATTCACACTC +
Preference number: 5 (lower is better)
Translates to: PTTRGSCTLEAGEVGSRGSVSRW*SASFTL
Trigger: GAGTGTGAATGAGGCACTCAACCACCTGCTGACAGA...GCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp TTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGTCCAGTTTGTCCACCTaGCTCAGGTACTCCCTCATC +
Preference number: 5 (lower is better)
Translates to: LEAGEVGSRGISIGEAGRSSLST*LRYSLI
Trigger: GATGAGGGAGTACCTGAGCAAGGTGGACAAACTGGA...CCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGATCCAAGGCATCCAGTTaGTCCACCTTGCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRSKASS*STLLRY
Trigger: GTACCTGAGCAAGGTGGACAAACTGGATGCCTTGGA...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS TCA 90 bp CCACGGCTGCCAGACTGCAAGGAGTACACGGTACCTTTGGGATGTTaGCACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: PRLPDCKEYTVPLGC*HGTRKAPDAPASSV
Trigger: CACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS GCA 90 bp GTGATAGTGGCTGCTAACTCCATCATCCGCAACAGAAAGGGAATGTaGGCCTCAAAGTCCTGGGGGATCCCCACAAGCACTTTGACCCCC +
Preference number: 5 (lower is better)
Translates to: VIVAANSIIRNRKGM*ASKSWGIPTSTLTP
Trigger: GGGGGTCAAAGTGCTTGTGGGGATCCCCCAGGACTTTGAGGCGCACATTCCCTTTCTGTTGCGGATGATGGAGTTAGCAGCCACTATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp ATGTTGGCCAGCGGCTCCTCGTCCTGCACTAGCATTCGAGAAAACTaGAGGCCCTGTTCCGGACTGATCTTCATTACACCCCTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: MLASGSSSCTSIREN*RPCSGLIFITPLSR
Trigger: TCTGCTGAGGGGTGTAATGAAGATCAGTCCGGAACAGGGCCTGCAGTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCTGGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000540896.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp CATGATGGCACTCTCTGCAGAGATAGGCCGTCGGATCGGAGCCATTaGGTCACTCATGTCAATGATCGTGACCTGTGCCTGCTCACCAAC +
Preference number: 5 (lower is better)
Translates to: HDGTLCRDRPSDRSH*VTHVNDRDLCLLTN
Trigger: GTTGGTGAGCAGGCACAGGTCACGATCATTGACATGAGTGACCCAATGGCTCCGATCCGACGGCCTATCTCTGCAGAGAGTGCCATCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp TCACCTGGCAGCCCACCAGACTGGTATGTCTATCAAACATCTTCATaGGCTGGGAGTCACCTTCCATGCTCCAGTGGTAGACCGCGGTCT +
Preference number: 5 (lower is better)
Translates to: SPGSPPDWYVYQTSS*AGSHLPCSSGRPRS
Trigger: AGACCGCGGTCTACCACTGGAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATAGACATACCAGTCTGGTGGGCTGCCAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS-3UTR CAA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTATGTCACATGCTCCTCTaGCTTGCGCAGACTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLCHMLL*LAQTLQ
Trigger: TTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACA...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGTGTCACATGCTCCTCTaGCTTGCGCAGACTCTCCAA +
Preference number: 5 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWECHMLL*LAQTLQ
Trigger: TTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACA...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACCGCGGAAGTTGTACATaGGAGGCTGGCGAAGTTGGG +
Preference number: 5 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYRGSCT*EAGEVG
Trigger: CCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCG...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCCACTACACGCGGAAGTaGTACATTGGAGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: TRGSCTLEAGEVGSRGISHYTRK*YIGGWR
Trigger: TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG...GGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATCACTACACGCGGAAGTaGTACATTGGAGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: HYTRKLYIGGWRSWEQRHHYTRK*YIGGWR
Trigger: TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG...ATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGACAGTCCAGTCTCTGTaGTCGGCTAAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWTVQSL*SAKAGL
Trigger: AAGACCAGCTTTAGCCGACAACAGAGACTGGACTGT...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTAAAAGGGTGGCAGGCTaGGCATTCCCCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSKRVAG*AFPSIL
Trigger: CAAGATGGAGGGGAATGCCAAGCCTGCCACCCTTTT...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCATTCCAGAGGTTGGTTaGTGTGGAGCAGTGACAAAT +
Preference number: 5 (lower is better)
Translates to: LCCRLKLVLRRQPLPWPPIPEVG*CGAVTN
Trigger: ATTTGTCACTGCTCCACACAAACCAACCTCTGGAAT...GGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TGCAGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGACTGGATCACTTTGCTaGGCACATTTGCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: CRAPRSGPTSYCPCTDRPTGSLC*AHLPEG
Trigger: ACCTTCGGGCAAATGTGCCAAGCAAAGTGATCCAGT...CGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCACAATCTGGCTAATGTaGGCCAGCGGCTCCTCGTCC +
Preference number: 5 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRTIWLM*ASGSSS
Trigger: GGACGAGGAGCCGCTGGCCAACATTAGCCAGATTGT...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTTTCTCATTGCACACCTaGATGAGCTCAAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPFSLHT*MSSRSH
Trigger: GTGTGACCTTGAGCTCATCAAGGTGTGCAATGAGAA...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCGTGTGCGGTCTGCCTaGATGGCAGTCAGGATCAAC +
Preference number: 5 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNARVRSA*MAVRIN
Trigger: GTTGATCCTGACTGCCATCAAGGCAGACCGCACACG...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CAGCAACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCGCATTCATATCAAACTaGTGGAAAACGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QQLLGQLSIPRLCSMLHGAFISN*WKTVKA
Trigger: GGCCTTCACCGTTTTCCACAAGTTTGATATGAATGC...GCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCGATCAGGACCTGGATaGCTGAGGCATTCATATCAA +
Preference number: 5 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPRSGPG*LRHSYQ
Trigger: TTGATATGAATGCCTCAGCAATCCAGGTCCTGATCG...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCACACAGCAGGCTCATaGCATCTCTCCGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEHTAGS*HLSANS
Trigger: TGAGTTTGCGGAGAGATGCAATGAGCCTGCTGTGTG...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: QVGWVVTTPTTRGSCTLECEAEL*SIHAGK
Trigger: TTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCA...CTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAAAGCACCTTTGGGATGTaGACACGGGACCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQSTFGM*TRDQKS
Trigger: GCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGCT...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GGAGGGCCCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAATGGTGAGCACAGCATaGTCATACTCCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GGPTVQSLLSAKAGLAPSMVSTA*SYSSYL
Trigger: CAAGTACGAGGAGTATGACAATGCTGTGCTCACCAT...TGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGGGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGTTCACACTCTTGTTGTaGTGGCTCTGGACTGACCGC +
Preference number: 5 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLFTLLL*WLWTDR
Trigger: GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAA...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTATTCACACTCTTGTTGTaGTGGCTCTGGACTGACCGC +
Preference number: 5 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLFTLLL*WLWTDR
Trigger: GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAA...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp AACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTCATTCACACTCTTGTaGTTGTGGCTCTGGACTGAC +
Preference number: 5 (lower is better)
Translates to: NFWASSASRDSAACCMASSFTLL*LWLWTD
Trigger: GTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGA...GGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGTCCAAGGCATCCAGTTaGTCCACCTTGCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWESKASS*STLLRY
Trigger: GTACCTGAGCAAGGTGGACAAACTGGATGCCTTGGA...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAATCCAAGGCATCCAGTTaGTCCACCTTGCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQSKASS*STLLRY
Trigger: GTACCTGAGCAAGGTGGACAAACTGGATGCCTTGGA...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS TCA 90 bp AGCAGGATTCCGAAGTACTGCAGCAATGGAGAAGCCTGGCCAGACTaGGCGGGTATACTCTGGAATTTCTGGACCGTCTCTCTGGTACGC +
Preference number: 5 (lower is better)
Translates to: SRIPKYCSNGEAWPD*AGILWNFWTVSLVR
Trigger: GCGTACCAGAGAGACGGTCCAGAAATTCCAGAGTATACCCGCTCAGTCTGGCCAGGCTTCTCCATTGCTGCAGTACTTCGGAATCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp GCATGCTGCATGGCATCCTTTGAAAAGAAACTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGCACCAGCAGCAGGTCATTGATGAGC +
Preference number: 5 (lower is better)
Translates to: ACCMASFEKKLTVQV*SSRGESTSSRSLMS
Trigger: GCTCATCAATGACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCACACCTGGACAGTCAGTTTCTTTTCAAAGGATGCCATGCAGCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS-3UTR CAA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTGTCACATGCTCCTCTaGCTTGCGCAGACTCTCCAA +
Preference number: 5 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRCHMLL*LAQTLQ
Trigger: TTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACA...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGACAGTCCAGTCTCTGTaGTCGGCTAAAGCTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LQVGWVVTTPTTRGSCTLTVQSL*SAKAGL
Trigger: AAGACCAGCTTTAGCCGACAACAGAGACTGGACTGT...CAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTGCATTCCCCTCCATCTaGAACTCTGCAAAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSAFPSI*NSAKAA
Trigger: TGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAATGC...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCAAAAGGGTGGCAGGCTaGGCATTCCCCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LQTRRVHVVFKLAWRGQLKRVAG*AFPSIL
Trigger: CAAGATGGAGGGGAATGCCAAGCCTGCCACCCTTTT...GAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGATCAATGATGTGCAACTaGCCTCCTGTGGGATTACGT +
Preference number: 5 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGSMMCN*PPVGLR
Trigger: ACGTAATCCCACAGGAGGCAAGTTGCACATCATTGA...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCATGGGGTCAGTGGTTTaGACCAAGTCTCCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: YTRKLYIGGWRSWEQRHIMGSVV*TKSPSS
Trigger: GGAGCTCGGAGACTTGGTCAAAACCACTGACCCCAT...GATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATAAACACTGGATCACTTaGCTTGGCACATTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: EGQALSHAPLACADSPRHKHWIT*LGTFAR
Trigger: TCGGGCAAATGTGCCAAGCAAAGTGATCCAGTGTTT...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp TGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTACCCTGGCCTCCCCAGTACCTCTGCAGGTTGTaGCGGTATAAATATAGGACA +
Preference number: 5 (lower is better)
Translates to: CCRLKLVLRRQPLPWPPQYLCRL*RYKYRT
Trigger: TGTCCTATATTTATACCGCAACAACCTGCAGAGGTA...CTGGGGAGGCCAGGGTAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGATGTACCTCTGCAGGTaGTTGCGGTATAAATATAGG +
Preference number: 5 (lower is better)
Translates to: AGEVGSRGISIGEAGRGWMYLCR*LRYKYR
Trigger: CCTATATTTATACCGCAACAACCTGCAGAGGTACAT...CCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCAACAGAGAATTCTCATaGCACACCTTGATGAGCTCA +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGNREFS*HTLMSS
Trigger: TGAGCTCATCAAGGTGTGCAATGAGAATTCTCTGTT...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGCCTCCCCAGGCTCTGGGATGGCTCAGAGGTTGCCGTCATTGGGTTTCAGCAAGCATTCATATCAAACTaGTGGAAAACGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GLPRLWDGSEVAVIGFQQAFISN*WKTVKA
Trigger: GGCCTTCACCGTTTTCCACAAGTTTGATATGAATGC...TTGCTGAAACCCAATGACGGCAACCTCTGAGCCATCCCAGAGCCTGGGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGACTAGATCCTCCCAGTaGTTGCTCCTGCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRTRSSQ*LLLLAD
Trigger: GTCAGCCAGCAGGAGCAACAACTGGGAGGATCTAGT...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCTTCACACTCTTGTTGTaGTGGCTCTGGACTGACCGC +
Preference number: 5 (lower is better)
Translates to: EKLVTLQVGWVVTTPTTRFTLLL*WLWTDR
Trigger: GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAA...GCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATCCAGTTTGTCCACCTaGCTCAGGTACTCCCTCATC +
Preference number: 5 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPSSLST*LRYSLI
Trigger: GATGAGGGAGTACCTGAGCAAGGTGGACAAACTGGA...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GTCATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGTCCAGTTTGTCCACCTaGCTCAGGTACTCCCTCATC +
Preference number: 5 (lower is better)
Translates to: VIAGEETSCEALPLAFLQSSLST*LRYSLI
Trigger: GATGAGGGAGTACCTGAGCAAGGTGGACAAACTGGA...CTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS TCA 90 bp TTGCCCGAAGGTACACACTCAGAGCGAGCATGGGGTCAGTGGTTTTaGCCAAGTCTCCGAGCTCCTCTGAGCACTCCAGCTTATCTTCTT +
Preference number: 5 (lower is better)
Translates to: LPEGTHSERAWGQWF*PSLRAPLSTPAYLL
Trigger: AAGAAGATAAGCTGGAGTGCTCAGAGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCATGCTCGCTCTGAGTGTGTACCTTCGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 90 bp TGGTATGTCTATCAAACATCTTCATGGGCTGGGAGTCACCTTCCATaGTCCAGTGGTAGACCGCGGTCTCGGTCACCAAGGCAACAGTGT +
Preference number: 5 (lower is better)
Translates to: WYVYQTSSWAGSHLP*SSGRPRSRSPRQQC
Trigger: ACACTGTTGCCTTGGTGACCGAGACCGCGGTCTACCACTGGAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATAGACATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 90 bp AAAATGTCCACAATCTGGCTAATGTTGGCCAGCGGCTCCTCGTCCTaGACTAGCATTCGAGAAAACTGCAGGCCCTGTTCCGGACTGATC +
Preference number: 5 (lower is better)
Translates to: KMSTIWLMLASGSSS*TSIRENCRPCSGLI
Trigger: GATCAGTCCGGAACAGGGCCTGCAGTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCTGGCCAACATTAGCCAGATTGTGGACATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000540896.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp ATTGAGCTGACCCTGGTCGAGCAGGATTCCGAAGTACTGCAGCAATaGAGAAGCCTGGCCAGACTGAGCGGGTATACTCTGGAATTTCTG +
Preference number: 5 (lower is better)
Translates to: IELTLVEQDSEVLQQ*RSLARLSGYTLEFL
Trigger: CAGAAATTCCAGAGTATACCCGCTCAGTCTGGCCAGGCTTCTCCATTGCTGCAGTACTTCGGAATCCTGCTCGACCAGGGTCAGCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS-3UTR CAA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGGCGAAGCACTCCCTCTaGCCTTCCTCCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEAKHSL*PSSRNH
Trigger: GTGGTTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGC...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAACATGCTCCTCTTGCTaGCGCAGACTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SCTLEAGEVGSRGISIGETCSSC*RRLSKA
Trigger: TGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGT...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACATGCTCCTCTTGCTaGCGCAGACTCTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGTCSSC*RRLSKA
Trigger: TGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCTGTCACATGCTCCTCTaGCTTGCGCAGACTCTCCAA +
Preference number: 5 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRCHMLL*LAQTLQ
Trigger: TTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACA...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACACACTACACGCGGAAGTaGTACATTGGAGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTHYTRK*YIGGWR
Trigger: TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCGGAGTGACATGCTCCTaGGAGAAGTTAGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGGVTCS*EKLVTL
Trigger: CAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCC...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGAGTGACATGCTCCTaGGAGAAGTTAGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGGVTCS*EKLVTL
Trigger: CAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCC...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAGGAGTGACATGCTCCTaGGAGAAGTTAGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAGVTCS*EKLVTL
Trigger: CAGAGTTACTAACTTCTCCAAGGAGCATGTCACTCC...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCGCATTCCCCTCCATCTaGAACTCTGCAAAAGCCGCA +
Preference number: 5 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRAFPSI*NSAKAA
Trigger: TGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAATGC...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATTTCTTTACAAAAGGTaGGTTTCCCGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAFLYKR*VSRCRL
Trigger: CAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAAA...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAAAACACTGGATCACTTaGCTTGGCACATTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLKHWIT*LGTFAR
Trigger: TCGGGCAAATGTGCCAAGCAAAGTGATCCAGTGTTT...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp ACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACAAAACACTGGATCACTTaGCTTGGCACATTTGCCCGA +
Preference number: 5 (lower is better)
Translates to: TLQVGWVVTTPTTRGSCTKHWIT*LGTFAR
Trigger: TCGGGCAAATGTGCCAAGCAAAGTGATCCAGTGTTT...TGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGAAGGAGCCAAAGAAATaGACAAGCCACTCGGGATTG +
Preference number: 5 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEKEPKK*TSHSGL
Trigger: CAATCCCGAGTGGCTTGTCAATTTCTTTGGCTCCTT...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGAAGGAGCCAAAGAAATaGACAAGCCACTCGGGATTG +
Preference number: 5 (lower is better)
Translates to: GDNAHYTRKLYIGGWRSWKEPKK*TSHSGL
Trigger: CAATCCCGAGTGGCTTGTCAATTTCTTTGGCTCCTT...CCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCATCCTCTCCACCTCCTaGATCTGCCCTGTCTTACAG +
Preference number: 5 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRILSTS*ICPVLQ
Trigger: CTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGAT...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTATGTACCTCTGCAGGTaGTTGCGGTATAAATATAGG +
Preference number: 5 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPMYLCR*LRYKYR
Trigger: CCTATATTTATACCGCAACAACCTGCAGAGGTACAT...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGGCATTCATATCAAACTaGTGGAAAACGGTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: RVGGDNAHYTRKLYIGGWAFISN*WKTVKA
Trigger: GGCCTTCACCGTTTTCCACAAGTTTGATATGAATGC...CCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAACACACAGCAGGCTCATaGCATCTCTCCGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: IAGEETSCEALPLAFLQEHTAGS*HLSANS
Trigger: TGAGTTTGCGGAGAGATGCAATGAGCCTGCTGTGTG...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGTTTCTGGAGCTGGGCTaGGGCCAGCTGACTCCACAC +
Preference number: 5 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEFLELG*GQLTPH
Trigger: GTGTGGAGTCAGCTGGCCCAAGCCCAGCTCCAGAAA...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAACTAGATCCTCCCAGTaGTTGCTCCTGCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGTRSSQ*LLLLAD
Trigger: GTCAGCCAGCAGGAGCAACAACTGGGAGGATCTAGT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNACEAEL*SIHAGK
Trigger: TTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCA...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRCEAEL*SIHAGK
Trigger: TTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCA...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACAGCACCTTTGGGATGTaGACACGGGACCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYSTFGM*TRDQKS
Trigger: GCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGCT...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGATCGACGTTGGCAACCTaGGTAATGATGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGSTLAT*VMMSLN
Trigger: GTTCAAGGACATCATTACCAAGGTTGCCAACGTCGA...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCTCGACGTTGGCAACCTaGGTAATGATGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGSTLAT*VMMSLN
Trigger: GTTCAAGGACATCATTACCAAGGTTGCCAACGTCGA...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTATCATTCACACTCTTGTaGTTGTGGCTCTGGACTGAC +
Preference number: 5 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLSFTLL*LWLWTD
Trigger: GTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGA...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGGCCTCATTCACACTCTaGTTGTTGTGGCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGASFTL*LLWLWT
Trigger: AGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGC...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp TACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCTCTGTCAGCAGGTGGTaGAGTGCCTCATTCACACTC +
Preference number: 5 (lower is better)
Translates to: YTRKLYIGGWRSWEQRHISVSRW*SASFTL
Trigger: GAGTGTGAATGAGGCACTCAACCACCTGCTGACAGA...GATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp GGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGTCTGTCAGCAGGTGGTaGAGTGCCTCATTCACACTC +
Preference number: 5 (lower is better)
Translates to: GSCTLEAGEVGSRGISIGSVSRW*SASFTL
Trigger: GAGTGTGAATGAGGCACTCAACCACCTGCTGACAGA...CCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS-3UTR CAA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCTCCAGTTTGTCCACCTaGCTCAGGTACTCCCTCATC +
Preference number: 5 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNASSLST*LRYSLI
Trigger: GATGAGGGAGTACCTGAGCAAGGTGGACAAACTGGA...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS CCA 90 bp TGGTTCTCAGAACACAGACTACTTTCAGGAAAGACACCCGAGGGATaGGAAAACCTGCTCATCATGGTGACAGCAGCTTCCACAGGCACG +
Preference number: 5 (lower is better)
Translates to: WFSEHRLLSGKTPEG*ENLLIMVTAASTGT
Trigger: CGTGCCTGTGGAAGCTGCTGTCACCATGATGAGCAGGTTTTCCCATCCCTCGGGTGTCTTTCCTGAAAGTAGTCTGTGTTCTGAGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp GGTACTCATCAGTCCGGTAGTGAATCACCTGGCAGCCCACCAGACTaGTATGTCTATCAAACATCTTCATGGGCTGGGAGTCACCTTCCA +
Preference number: 5 (lower is better)
Translates to: GTHQSGSESPGSPPD*YVYQTSSWAGSHLP
Trigger: TGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATAGACATACCAGTCTGGTGGGCTGCCAGGTGATTCACTACCGGACTGATGAGTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp TGCTCGATCAGGACCTGGATTGCTGAGGCATTCATATCAAACTTGTaGAAAACGGTGAAGGCCTCCTCATACAGTGCGCTGCTGACAGCG +
Preference number: 5 (lower is better)
Translates to: CSIRTWIAEAFISNL*KTVKASSYSALLTA
Trigger: CGCTGTCAGCAGCGCACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGTTTGATATGAATGCCTCAGCAATCCAGGTCCTGATCGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS-3UTR CAA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGACAGAGGTTGCCGTCATaGGGTTTCAGCAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGQRLPS*GFSKNK
Trigger: TTTATTTTTGCTGAAACCCAATGACGGCAACCTCTG...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp TATGAGGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCGGGATGGCTCAGAGGTaGCCGTCATTGGGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: YEVRYLQTRRVHVVFKLAGMAQR*PSLGFS
Trigger: GCTGAAACCCAATGACGGCAACCTCTGAGCCATCCC...GGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGATTAATTCCAAGGTTTaGGAGCTGGAAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DNAHYTRKLYIGGWRSWEINSKV*ELEVLL
Trigger: CAGGAGCACTTCCAGCTCCAAAACCTTGGAATTAAT...CTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCAATTAATTCCAAGGTTTaGGAGCTGGAAGTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: PLHAEVVHWRLAKLGAEAINSKV*ELEVLL
Trigger: CAGGAGCACTTCCAGCTCCAAAACCTTGGAATTAAT...TGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGACGGATACATATGAACTaGTCAGATTCCATGGTCAGT +
Preference number: 5 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGRIHMN*SDSMVS
Trigger: ACTGACCATGGAATCTGACAAGTTCATATGTATCCG...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCAGGGGCTGGGCTGTGCAAAGAGGGTATaGAATTTTCTCACAAACAAC +
Preference number: 5 (lower is better)
Translates to: WRSWEQRHIHRGSWQGLGCAKRV*NFLTNN
Trigger: GTTGTTTGTGAGAAAATTCAATACCCTCTTTGCACA...GCCCAGCCCCTGCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAATACGCAGGATTCCCTTaGGTGCAGACGCTGCAACTT +
Preference number: 5 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEYAGFP*VQTLQL
Trigger: AAGTTGCAGCGTCTGCACCAAAGGGAATCCTGCGTA...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTATGGGGTCAGTGGTTTaGACCAAGTCTCCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFMGSVV*TKSPSS
Trigger: GGAGCTCGGAGACTTGGTCAAAACCACTGACCCCAT...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGACTGGATCACTTTGCTaGGCACATTTGCCCGAAGGT +
Preference number: 5 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRTGSLC*AHLPEG
Trigger: ACCTTCGGGCAAATGTGCCAAGCAAAGTGATCCAGT...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGTTCTCATTGCACACCTaGATGAGCTCAAGGTCACAC +
Preference number: 5 (lower is better)
Translates to: GEVSNSAGRVGGDNAHYTFSLHT*MSSRSH
Trigger: GTGTGACCTTGAGCTCATCAAGGTGTGCAATGAGAA...CGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATAACAGAGAATTCTCATaGCACACCTTGATGAGCTCA +
Preference number: 5 (lower is better)
Translates to: EGQALSHAPLACADSPRHNREFS*HTLMSS
Trigger: TGAGCTCATCAAGGTGTGCAATGAGAATTCTCTGTT...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGTCGGAAACAGAGAATTCTCATaGCACACCTTGATGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RVHVVFKLAWRGQLQPVGNREFS*HTLMSS
Trigger: TGAGCTCATCAAGGTGTGCAATGAGAATTCTCTGTT...TCCGACTGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCACCTTTGGGATGTaGACACGGGACCAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGSTFGM*TRDQKS
Trigger: GCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTGCT...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTCTGGGTCGACGTTGGCAACCTaGGTAATGATGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AAWHPCRDDPSCRAPRSGSTLAT*VMMSLN
Trigger: GTTCAAGGACATCATTACCAAGGTTGCCAACGTCGA...CCCAGAGCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CTCTGTCAGCAGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGTTCACACTCTTGTTGTaGTGGCTCTGGACTGACCGC +
Preference number: 5 (lower is better)
Translates to: LCQQVVECLIHTLVVVALFTLLL*WLWTDR
Trigger: GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAA...CAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAATCCAAGGCATCCAGTTaGTCCACCTTGCTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SCTLEAGEVGSRGISIGESKASS*STLLRY
Trigger: GTACCTGAGCAAGGTGGACAAACTGGATGCCTTGGA...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GCCTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTACAGAGGTTGCCGTCATaGGGTTTCAGCAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: ASHCVPCAAGVTCSLEKLQRLPS*GFSKNK
Trigger: TTTATTTTTGCTGAAACCCAATGACGGCAACCTCTG...TAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp AGGTGGTTGAGTGCCTCATTCACACTCTTGTTGTTGTGGCTCTGGACTGACCGCTTTCTTTACAAAAGGTaGGTTTCCCGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RWLSASFTLLLLWLWTDRFLYKR*VSRCRL
Trigger: CAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAAA...GCGGTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTACCTGTCCCTTTTaGTTGACACCAATAATTCCA +
Preference number: 5 (lower is better)
Translates to: VGGDNAHYTRKLYIGGWRSTCPF*LTPIIP
Trigger: TGGAATTATTGGTGTCAACAAAAAGGGACAGGTACT...TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp ACTTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATGGCATCCTTGTGCAAAGAGGGTATaGAATTTTCTCACAAACAAC +
Preference number: 5 (lower is better)
Translates to: TSGPAQHPATLQHAAWHPCAKRV*NFLTNN
Trigger: GTTGTTTGTGAGAAAATTCAATACCCTCTTTGCACA...AGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTTACGCAGGATTCCCTTaGGTGCAGACGCTGCAACTT +
Preference number: 5 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFYAGFP*VQTLQL
Trigger: AAGTTGCAGCGTCTGCACCAAAGGGAATCCTGCGTA...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GTACAGATAGGCCGCAATGCACCTGAACTCCATCAGCTGATGCTTCTCCAGCTGAAGGAGCCAAAGAAATaGACAAGCCACTCGGGATTG +
Preference number: 5 (lower is better)
Translates to: VQIGRNAPELHQLMLLQLKEPKK*TSHSGL
Trigger: CAATCCCGAGTGGCTTGTCAATTTCTTTGGCTCCTT...CAGCTGGAGAAGCATCAGCTGATGGAGTTCAGGTGCATTGCGGCCTATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCAGCTGTCATAAAGGCTTaGACAGTGACCGAAATCTCT +
Preference number: 5 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPAVIKA*TVTEIS
Trigger: AGAGATTTCGGTCACTGTCAAAGCCTTTATGACAGC...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACCGATCAGGACCTGGATaGCTGAGGCATTCATATCAA +
Preference number: 5 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYRSGPG*LRHSYQ
Trigger: TTGATATGAATGCCTCAGCAATCCAGGTCCTGATCG...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AGAGCTCCACGCTCTGGGCCCACCAGTTATTGCCCTTGTACAGATAGGCCGCAATGCTGGATGTGGGCATaGTTGGGTCCATTAATAAAA +
Preference number: 5 (lower is better)
Translates to: RAPRSGPTSYCPCTDRPQCWMWA*LGPLIK
Trigger: TTTTATTAATGGACCCAACAATGCCCACATCCAGCA...TTGCGGCCTATCTGTACAAGGGCAATAACTGGTGGGCCCAGAGCGTGGAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CCACAGTCCAGTCTCTGTTGTCGGCTAAAGCTGGTCTTGCGCCGTCAGCCTCTATGCTGGATGTGGGCATaGTTGGGTCCATTAATAAAA +
Preference number: 5 (lower is better)
Translates to: PQSSLCCRLKLVLRRQPLCWMWA*LGPLIK
Trigger: TTTTATTAATGGACCCAACAATGCCCACATCCAGCA...TAGAGGCTGACGGCGCAAGACCAGCTTTAGCCGACAACAGAGACTGGACTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACATGGTGAGCACAGCATaGTCATACTCCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYMVSTA*SYSSYL
Trigger: CAAGTACGAGGAGTATGACAATGCTGTGCTCACCAT...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCTCGACGTTGGCAACCTaGGTAATGATGTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: MLLGEVSNSAGRVGGDNASTLAT*VMMSLN
Trigger: GTTCAAGGACATCATTACCAAGGTTGCCAACGTCGA...GGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp CCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCATCATTCACACTCTTGTaGTTGTGGCTCTGGACTGAC +
Preference number: 5 (lower is better)
Translates to: PNKTCSCSLQTGLEGAAPSFTLL*LWLWTD
Trigger: GTCAGTCCAGAGCCACAACAACAAGAGTGTGAATGA...TGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAGCCTCATTCACACTCTaGTTGTTGTGGCTCTGGACT +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGASFTL*LLWLWT
Trigger: AGTCCAGAGCCACAACAACAAGAGTGTGAATGAGGC...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
CDS TCA 90 bp CATCTTGAACTCTGCAAAAGCCGCAGCATGGCCTTCTATGGGTTGTaGAACCTTCCTATCCACAGAGTAGAGCTGCATTGCTCCAACCAC +
Preference number: 5 (lower is better)
Translates to: HLELCKSRSMAFYGL*NLPIHRVELHCSNH
Trigger: GTGGTTGGAGCAATGCAGCTCTACTCTGTGGATAGGAAGGTTTCACAACCCATAGAAGGCCATGCTGCGGCTTTTGCAGAGTTCAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 90 bp CGGGCCTCTACTGCCAGGAAGAGATTCAAGCACTTTCTTTCCTTGTaGTGGTTCTCAGAACACAGACTACTTTCAGGAAAGACACCCGAG +
Preference number: 5 (lower is better)
Translates to: RASTARKRFKHFLSL*WFSEHRLLSGKTPE
Trigger: CTCGGGTGTCTTTCCTGAAAGTAGTCTGTGTTCTGAGAACCAGCACAAGGAAAGAAAGTGCTTGAATCTCTTCCTGGCAGTAGAGGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 90 bp ATTCATATCAAACTTGTGGAAAACGGTGAAGGCCTCCTCATACAGTaGGCTGCTGACAGCGATGCTCGCGATGTCCAGTGCGTCATAGTT +
Preference number: 5 (lower is better)
Translates to: IHIKLVENGEGLLIQ*AADSDARDVQCVIV
Trigger: AACTATGACGCACTGGACATCGCGAGCATCGCTGTCAGCAGCGCACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGTTTGATATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS-3UTR CAA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAACACTACACGCGGAAGTaGTACATTGGAGGCTGGCGA +
Preference number: 5 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQHYTRK*YIGGWR
Trigger: TCGCCAGCCTCCAATGTACAACTTCCGCGTGTAGTG...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp ACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGGGGGCAGCTCCAGCCACGGATACATATGAACTaGTCAGATTCCATGGTCAGT +
Preference number: 5 (lower is better)
Translates to: TRRVHVVFKLAWRGQLQPRIHMN*SDSMVS
Trigger: ACTGACCATGGAATCTGACAAGTTCATATGTATCCG...TGGCTGGAGCTGCCCCCTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GTGACATGCTCCTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACATTTCTTTACAAAAGGTaGGTTTCCCGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VTCSLEKLVTLQVGWVVTFLYKR*VSRCRL
Trigger: CAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAAA...TGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAGGAGCATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGATTCCAGAGGTTGGTTaGTGTGGAGCAGTGACAAAT +
Preference number: 5 (lower is better)
Translates to: RKLYIGGWRSWEQRHIHRIPEVG*CGAVTN
Trigger: ATTTGTCACTGCTCCACACAAACCAACCTCTGGAAT...CCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GAGGGGCAGGCTCTGTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATTCTGAAGCACGTTGGTaGCATAATTCACAATGTTAT +
Preference number: 5 (lower is better)
Translates to: EGQALSHAPLACADSPRHSEARW*HNSQCY
Trigger: ATAACATTGTGAATTATGCAACCAACGTGCTTCAGA...ATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGACAGAGCCTGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp TTCCTCAGAACAATCCACATCAAGCAGCCCTCCAATCACAGCTGGGGTCCGGCTTACCTCTGCAGGTTGTaGCGGTATAAATATAGGACA +
Preference number: 5 (lower is better)
Translates to: FLRTIHIKQPSNHSWGPAYLCRL*RYKYRT
Trigger: TGTCCTATATTTATACCGCAACAACCTGCAGAGGTA...AGCCGGACCCCAGCTGTGATTGGAGGGCTGCTTGATGTGGATTGTTCTGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGACGATCAGGACCTGGATaGCTGAGGCATTCATATCAA +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGRSGPG*LRHSYQ
Trigger: TTGATATGAATGCCTCAGCAATCCAGGTCCTGATCG...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GCAGGTAGGGTGGGTGGTGACAACGCCCACTACACGCGGAAGTTGTACATTGGATGGATGTGGGCATTGTaGGGTCCATTAATAAAATCT +
Preference number: 5 (lower is better)
Translates to: AGRVGGDNAHYTRKLYIGWMWAL*GPLIKS
Trigger: AGATTTTATTAATGGACCCAACAATGCCCACATCCA...TCCAATGTACAACTTCCGCGTGTAGTGGGCGTTGTCACCACCCACCCTACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS TCA 90 bp CAACTTTGGCGGCTTCAGCATAGCTGCCCTGTGCAAAGAGGGTATTaGATTTTCTCACAAACAACTTCTCTGCCCCAGCCAGGTTACTAC +
Preference number: 5 (lower is better)
Translates to: QLWRLQHSCPVQRGY*IFSQTTSLPQPGYY
Trigger: GTAGTAACCTGGCTGGGGCAGAGAAGTTGTTTGTGAGAAAATTCAATACCCTCTTTGCACAGGGCAGCTATGCTGAAGCCGCCAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 90 bp TCGGATCGGAGCCATTGGGTCACTCATGTCAATGATCGTGACCTGTaGCTGCTCACCAACTTTCTCTCGGATACATATGAACTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SDRSHWVTHVNDRDL*LLTNFLSDTYELVR
Trigger: TCTGACAAGTTCATATGTATCCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATTGACATGAGTGACCCAATGGCTCCGATCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 90 bp GCCTCTACTGCCAGGAAGAGATTCAAGCACTTTCTTTCCTTGTGCTaGTTCTCAGAACACAGACTACTTTCAGGAAAGACACCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: ASTARKRFKHFLSLC*FSEHRLLSGKTPEG
Trigger: TCCCTCGGGTGTCTTTCCTGAAAGTAGTCTGTGTTCTGAGAACCAGCACAAGGAAAGAAAGTGCTTGAATCTCTTCCTGGCAGTAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS-3UTR CAA 90 bp ACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGGCTGTGCAAAGAGGGTATaGAATTTTCTCACAAACAAC +
Preference number: 5 (lower is better)
Translates to: TLEAGEVGSRGISIGEAGCAKRV*NFLTNN
Trigger: GTTGTTTGTGAGAAAATTCAATACCCTCTTTGCACA...GCCAGCTTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp ATAGCAGGTGAAGAGACAAGCTGCGAAGCACTCCCTCTTGCCTTCCTCCAGGAATACCTCTGCAGGTTGTaGCGGTATAAATATAGGACA +
Preference number: 5 (lower is better)
Translates to: IAGEETSCEALPLAFLQEYLCRL*RYKYRT
Trigger: TGTCCTATATTTATACCGCAACAACCTGCAGAGGTA...TTCCTGGAGGAAGGCAAGAGGGAGTGCTTCGCAGCTTGTCTCTTCACCTGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGAAGCTGTCATAAAGGCTTaGACAGTGACCGAAATCTCT +
Preference number: 5 (lower is better)
Translates to: SCTLEAGEVGSRGISIGEAVIKA*TVTEIS
Trigger: AGAGATTTCGGTCACTGTCAAAGCCTTTATGACAGC...TTCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAATCCAGTTTGTCCACCTaGCTCAGGTACTCCCTCATC +
Preference number: 5 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQSSLST*LRYSLI
Trigger: GATGAGGGAGTACCTGAGCAAGGTGGACAAACTGGA...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS GCA 90 bp ATCGGAGCCATTGGGTCACTCATGTCAATGATCGTGACCTGTGCCTaGTCACCAACTTTCTCTCGGATACATATGAACTTGTCAGATTCC +
Preference number: 5 (lower is better)
Translates to: IGAIGSLMSMIVTCA*SPTFSRIHMNLSDS
Trigger: GGAATCTGACAAGTTCATATGTATCCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATTGACATGAGTGACCCAATGGCTCCGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS-3UTR CAA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGCAGAGGTTGCCGTCATaGGGTTTCAGCAAAAATAAA +
Preference number: 5 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEQRLPS*GFSKNK
Trigger: TTTATTTTTGCTGAAACCCAATGACGGCAACCTCTG...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000621271.4
ENST00000622493.4
CDS-3UTR CAA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTATTCCAGAGGTTGGTTaGTGTGGAGCAGTGACAAAT +
Preference number: 5 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFIPEVG*CGAVTN
Trigger: ATTTGTCACTGCTCCACACAAACCAACCTCTGGAAT...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CTTGGAGAAGTTAGTAACTCTGCAGGTAGGGTGGGTGGTGACAACGCCCACTACAGTACCTGTCCCTTTTaGTTGACACCAATAATTCCA +
Preference number: 5 (lower is better)
Translates to: LGEVSNSAGRVGGDNAHYSTCPF*LTPIIP
Trigger: TGGAATTATTGGTGTCAACAAAAAGGGACAGGTACT...GTAGTGGGCGTTGTCACCACCCACCCTACCTGCAGAGTTACTAACTTCTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CTCCCATTGCGTCCCCTGTGCTGCTGGAGTGACATGCTCCTTGGAGAAGTTAGTTCTGAAGCACGTTGGTaGCATAATTCACAATGTTAT +
Preference number: 5 (lower is better)
Translates to: LPLRPLCCWSDMLLGEVSSEARW*HNSQCY
Trigger: ATAACATTGTGAATTATGCAACCAACGTGCTTCAGA...ACTAACTTCTCCAAGGAGCATGTCACTCCAGCAGCACAGGGGACGCAATGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CACGCGGAAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATCTGAAGCACGTTGGTaGCATAATTCACAATGTTAT +
Preference number: 5 (lower is better)
Translates to: HAEVVHWRLAKLGAEAYPSEARW*HNSQCY
Trigger: ATAACATTGTGAATTATGCAACCAACGTGCTTCAGA...TGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTTCCGCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GGTCCGGTACCTCCAAACAAGACGTGTTCATGTAGTCTTCAAACTGGCCTGGAGTACCTCTGCAGGTTGTaGCGGTATAAATATAGGACA +
Preference number: 5 (lower is better)
Translates to: GPVPPNKTCSCSLQTGLEYLCRL*RYKYRT
Trigger: TGTCCTATATTTATACCGCAACAACCTGCAGAGGTA...CTCCAGGCCAGTTTGAAGACTACATGAACACGTCTTGTTTGGAGGTACCGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGCTGTCATAAAGGCTTaGACAGTGACCGAAATCTCT +
Preference number: 5 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFAVIKA*TVTEIS
Trigger: AGAGATTTCGGTCACTGTCAAAGCCTTTATGACAGC...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CAGCATGCTGCATGGCATCCTTGTAGAGATGATCCTTCTTGCAGAGCTCCACGCTGGATGTGGGCATTGTaGGGTCCATTAATAAAATCT +
Preference number: 5 (lower is better)
Translates to: QHAAWHPCRDDPSCRAPRWMWAL*GPLIKS
Trigger: AGATTTTATTAATGGACCCAACAATGCCCACATCCA...GCGTGGAGCTCTGCAAGAAGGATCATCTCTACAAGGATGCCATGCAGCATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGATGGTGAGCACAGCATaGTCATACTCCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVEMVSTA*SYSSYL
Trigger: CAAGTACGAGGAGTATGACAATGCTGTGCTCACCAT...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp AAGTTGTACATTGGAGGCTGGCGAAGTTGGGAGCAGAGGCATATCCATAGGGGATGGATGTGGGCATTGTaGGGTCCATTAATAAAATCT +
Preference number: 5 (lower is better)
Translates to: KLYIGGWRSWEQRHIHRGWMWAL*GPLIKS
Trigger: AGATTTTATTAATGGACCCAACAATGCCCACATCCA...TCCCCTATGGATATGCCTCTGCTCCCAACTTCGCCAGCCTCCAATGTACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp CCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTGGAGTAGAGCGGATACATATGAACTaGTCAGATTCCATGGTCAGT +
Preference number: 5 (lower is better)
Translates to: PEKLQMLQHLLWLEFGVERIHMN*SDSMVS
Trigger: ACTGACCATGGAATCTGACAAGTTCATATGTATCCG...CTCTACTCCAAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp GACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGTGGCTTGAATTTAGTACCTGTCCCTTTTaGTTGACACCAATAATTCCA +
Preference number: 5 (lower is better)
Translates to: DTGPEKLQMLQHLLWLEFSTCPF*LTPIIP
Trigger: TGGAATTATTGGTGTCAACAAAAAGGGACAGGTACT...AAATTCAAGCCACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617103.4
CDS-3UTR CAA 90 bp TGCCTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTATCCTCTCCACCTCCTaGATCTGCCCTGTCTTACAG +
Preference number: 5 (lower is better)
Translates to: CLDKPTLIFMIAKRLRVLILSTS*ICPVLQ
Trigger: CTGTAAGACAGGGCAGATCAAGGAGGTGGAGAGGAT...AAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS CCA 90 bp ATGAGGCAGAGAGTCATCCTCCCTATAGCTGTTAGAAGGATTCAGTaGATCTGTGAATACTCCTACTATGTGTTCAGCAAAAGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: MRQRVILPIAVRRIQ*ICEYSYYVFSKRQL
Trigger: TAGCTGCCTTTTGCTGAACACATAGTAGGAGTATTCACAGATCCACTGAATCCTTCTAACAGCTATAGGGAGGATGACTCTCTGCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 90 bp TACGAACGGCCAAACGCAGACCAAGGTCTGGATTCTGAAGCACGTTaGTTGCATAATTCACAATGTTATCTTCCTCAACACAAACTGACA +
Preference number: 5 (lower is better)
Translates to: YERPNADQGLDSEAR*LHNSQCYLPQHKLT
Trigger: TGTCAGTTTGTGTTGAGGAAGATAACATTGTGAATTATGCAACCAACGTGCTTCAGAATCCAGACCTTGGTCTGCGTTTGGCCGTTCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS-3UTR CAA 90 bp TATGATTGCCAAGAGGCTGAGAGTCCTTTTATGAGGTCCGGTACCTCCAAACAAATGTACCTCTGCAGGTaGTTGCGGTATAAATATAGG +
Preference number: 5 (lower is better)
Translates to: YDCQEAESPFMRSGTSKQMYLCR*LRYKYR
Trigger: CCTATATTTATACCGCAACAACCTGCAGAGGTACAT...TTGTTTGGAGGTACCGGACCTCATAAAAGGACTCTCAGCCTCTTGGCAATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS-3UTR CAA 90 bp TCAATGTACCTCTGCAGGTTGTTGCGGTATAAATATAGGACAAGGTCATGGACAATGTACCTCTGCAGGTaGTTGCGGTATAAATATAGG +
Preference number: 5 (lower is better)
Translates to: SMYLCRLLRYKYRTRSWTMYLCR*LRYKYR
Trigger: CCTATATTTATACCGCAACAACCTGCAGAGGTACAT...TGTCCATGACCTTGTCCTATATTTATACCGCAACAACCTGCAGAGGTACATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458188.2
CDS TCA 90 bp AACAGACACATTTTTGTTTGGTTTCCTGTTCTGCCTAAAGCTGCATaGCCATTTCACTTCAGTCAGAAGCAATCAGGTACTAAGCATTTC +
Preference number: 5 (lower is better)
Translates to: NRHIFVWFPVLPKAA*PFHFSQKQSGTKHF
Trigger: GAAATGCTTAGTACCTGATTGCTTCTGACTGAAGTGAAATGGTCATGCAGCTTTAGGCAGAACAGGAAACCAAACAAAAATGTGTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611723.1
CDS-3UTR CAA 90 bp CTGGATAAACCGACTTTAATATTTATGATTGCCAAGAGGCTGAGAGTCCTTTTATGCTGGATGTGGGCATaGTTGGGTCCATTAATAAAA +
Preference number: 5 (lower is better)
Translates to: LDKPTLIFMIAKRLRVLLCWMWA*LGPLIK
Trigger: TTTTATTAATGGACCCAACAATGCCCACATCCAGCA...TAAAAGGACTCTCAGCCTCTTGGCAATCATAAATATTAAAGTCGGTTTATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427926.6
ENST00000621271.4
CDS TCA 90 bp AGGAAGTTATCCATCCTTTGTTTTAAACTCGTGTTAACAAAGAAATaGGCAGCAACATTATCATGTGTAGGTACCACCTTCTGCCAAACA +
Preference number: 5 (lower is better)
Translates to: RKLSILCFKLVLTKK*AATLSCVGTTFCQT
Trigger: TGTTTGGCAGAAGGTGGTACCTACACATGATAATGTTGCTGCTCATTTCTTTGTTAACACGAGTTTAAAACAAAGGATGGATAACTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540896.1
CDS GCA 72 bp CTGAAAGCGAACAGGGAGGATCTGCGCCATGGCTGGTaGGGGACCTCGGCGGCGGCGGCGGCAGCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LKANREDLRHGW*GTSAAAAAAAG
Trigger: TCCTGCCGCTGCCGCCGCCGCCGCCGAGGTCCCGCACCAGCCATGGCGCAGATCCTCCCTGTTCGCTTTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000621271.4
CDS CCA 72 bp CTCCTGAAAGCGAACAGGGAGGATCTGCGCCATGGCTaGTGCGGGACCTCGGCGGCGGCGGCGGCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: LLKANREDLRHG*CGTSAAAAAAA
Trigger: TGCCGCTGCCGCCGCCGCCGCCGAGGTCCCGCACCAGCCATGGCGCAGATCCTCCCTGTTCGCTTTCAGGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000621271.4
CDS GCA 72 bp CCAGGGTTGGGTCATGCCACACAGGGGCCGGGGAGCTaGAGCCGGCCCGGCACCTACCTTGCTCAGGTACTC +
Preference number: 6 (lower is better)
Translates to: PGLGHATQGPGS*SRPGTYLAQVL
Trigger: GAGTACCTGAGCAAGGTAGGTGCCGGGCCGGCTGCAGCTCCCCGGCCCCTGTGTGGCATGACCCAACCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp GGAGATGCCACCTCCGGAGGCTCTGGAGGGGACAGGTaGCTCACGGAGGCGCAGGTGCCCTGGGAGACAGGA +
Preference number: 6 (lower is better)
Translates to: GDATSGGSGGDR*LTEAQVPWETG
Trigger: TCCTGTCTCCCAGGGCACCTGCGCCTCCGTGAGCCACCTGTCCCCTCCAGAGCCTCCGGAGGTGGCATCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CCACTGGTGAAACGGAGATGCCACCTCCGGAGGCTCTaGAGGGGACAGGTGGCTCACGGAGGCGCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: PLVKRRCHLRRL*RGQVAHGGAGA
Trigger: GGCACCTGCGCCTCCGTGAGCCACCTGTCCCCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp GACCCCACCCACTGCCAGAGAGCGAGGCGGCAGCACTaGACTAGAGGGGCGGCAGCAACTGTGCAGCTAGGA +
Preference number: 6 (lower is better)
Translates to: DPTHCQRARRQH*TRGAAATVQLG
Trigger: TCCTAGCTGCACAGTTGCTGCCGCCCCTCTAGTGCAGTGCTGCCGCCTCGCTCTCTGGCAGTGGGTGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp GCATCCTGCAGGCAGAGGCTTTGTGCCTGCAGCAGCTaGGCCGGAGGGCAGGGAGTGGCACTAGACTCCACC +
Preference number: 6 (lower is better)
Translates to: ASCRQRLCACSS*AGGQGVALDST
Trigger: GGTGGAGTCTAGTGCCACTCCCTGCCCTCCGGCCCAGCTGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CCACCACCTCCCAGGGCCAGTGGAGTCTGGGAACCCTaGGCCAAGGCTGTGCAGCCACAGTGTGGACCAACG +
Preference number: 6 (lower is better)
Translates to: PPPPRASGVWEP*AKAVQPQCGPT
Trigger: CGTTGGTCCACACTGTGGCTGCACAGCCTTGGCCCAGGGTTCCCAGACTCCACTGGCCCTGGGAGGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp TGGCTGGGCCATTCCCTATGCCCTGCTGCCCACTGGTaGAACGGAGATGCCACCTCCGGAGGCTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: WLGHSLCPAAHW*NGDATSGGSGG
Trigger: CCCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp TTCCCTGAGGCTTCACCAGGCACTGACCCCACCCACTaGCAGAGAGCGAGGCGGCAGCACTGCACTAGAGGG +
Preference number: 6 (lower is better)
Translates to: FPEASPGTDPTH*QRARRQHCTRG
Trigger: CCCTCTAGTGCAGTGCTGCCGCCTCGCTCTCTGGCAGTGGGTGGGGTCAGTGCCTGGTGAAGCCTCAGGGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CTACAATGGGAGAGCGCTGGGGGCGTCTCAGAGGGATaGCCCTCAAGCTTCCCAGATGAGCCACGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: LQWESAGGVSEG*PSSFPDEPRGP
Trigger: GGGGCCTCGTGGCTCATCTGGGAAGCTTGAGGGCCATCCCTCTGAGACGCCCCCAGCGCTCTCCCATTGTAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 72 bp AGCCCTCAGCACCTGGACAAGGAGGTCAGGGTCGGCTaGTGCTGCACGTGGCCACGGCTGCCAGACTGCAAG +
Preference number: 6 (lower is better)
Translates to: SPQHLDKEVRVG*CCTWPRLPDCK
Trigger: CTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCAGGTGCTGAGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CAA 90 bp CTGCTCTGCAGCCCTCAGCACCTGGACAAGGAGGTCAGGGTCGGCTaGTGCTGCACGTGGCCACGGCTGCCAGACTGCAAGGAGTACACG +
Preference number: 6 (lower is better)
Translates to: LLCSPQHLDKEVRVG*CCTWPRLPDCKEYT
Trigger: CGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCAGGTGCTGAGGGCTGCAGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS GCA 72 bp TTCCCTATGCCCTGCTGCCCACTGGTGAAACGGAGATaGCACCTCCGGAGGCTCTGGAGGGGACAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: FPMPCCPLVKRR*HLRRLWRGQVA
Trigger: AGCCACCTGTCCCCTCCAGAGCCTCCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp AAGCCTGGACCCATGGCTGGGCCATTCCCTATGCCCTaGTGCCCACTGGTGAAACGGAGATGCCACCTCCGG +
Preference number: 6 (lower is better)
Translates to: KPGPMAGPFPMP*CPLVKRRCHLR
Trigger: CCGGAGGTGGCATCTCCGTTTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp AGGCCCCAGGCCCAGCTGTCCACCAGGAAAGGACTGTaGTTCTTGTCCGCGCCCTCATTCTCCCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: RPQAQLSTRKGL*FLSAPSFSQHC
Trigger: GCAGTGCTGGGAGAATGAGGGCGCGGACAAGAAGCACAGTCCTTTCCTGGTGGACAGCTGGGCCTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp CCATGCAGGCAAAGCACACCTCCTTCCACGTCCGGGTaGTGCTGGCCTTGCGGCTGTTGTCCACTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: PCRQSTPPSTSG*CWPCGCCPLLP
Trigger: AGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGGAGGTGTGCTTTGCCTGCATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS GCA 72 bp CAGCACCTGGACAAGGAGGTCAGGGTCGGCTTGTGCTaGACGTGGCCACGGCTGCCAGACTGCAAGGAGTAC +
Preference number: 6 (lower is better)
Translates to: QHLDKEVRVGLC*TWPRLPDCKEY
Trigger: GTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCAGGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CCA 72 bp CAACCGTATGCTAACAGCTGCACCCCCAGACGCCACTaGGAGCTCCTCAGGGAGCTGGGATTGCCAGCCACC +
Preference number: 6 (lower is better)
Translates to: QPYANSCTPRRH*ELLRELGLPAT
Trigger: GGTGGCTGGCAATCCCAGCTCCCTGAGGAGCTCCCAGTGGCGTCTGGGGGTGCAGCTGTTAGCATACGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CTACAGGAGGGCAACGGCCTTGAATGGACTCTGGGATaGCCTTTATCAGGGGCTGGGCAGCCCCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: LQEGNGLEWTLG*PLSGAGQPPGG
Trigger: GCCTCCAGGGGGCTGCCCAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CCAGGGCCCTTGTCAATCCAACCAGTCCATGTCCCCTaGCAGCCCACGAATCTCAGGCCACGTAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGPLSIQPVHVP*QPTNLRPRSQG
Trigger: GCCCTGGCTACGTGGCCTGAGATTCGTGGGCTGCCAGGGGACATGGACTGGTTGGATTGACAAGGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp GGGCTGGGGATGAGCACGCCTGTTGTGCTCCTAGCAGTGTGCACATaGGGACAGCTGCCCAGCCAGAGTCTACAGGAGGGCTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: GLGMSTPVVLLAVCT*GQLPSQSLQEGCCQ
Trigger: CTGGCAGCAGCCCTCCTGTAGACTCTGGCTGGGCAGCTGTCCCAATGTGCACACTGCTAGGAGCACAACAGGCGTGCTCATCCCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp CGTGCACAGGCTGCTCTGAGGAAGGCACTGATGGGAGTTTGGGGGTaGTGGGGCTGCTGCAGAGGTGCTGCACTCAGGTCCATGGAGCGT +
Preference number: 6 (lower is better)
Translates to: RAQAALRKALMGVWG*WGCCRGAALRSMER
Trigger: ACGCTCCATGGACCTGAGTGCAGCACCTCTGCAGCAGCCCCACAACCCCCAAACTCCCATCAGTGCCTTCCTCAGAGCAGCCTGTGCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp CAGGTGAGAGCTCCAGGTGCCTTTGGGTCTCCGCTTTaGGGACCTGTGACGCCCGCTCATCTGTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: QVRAPGAFGSPL*GPVTPAHLSPC
Trigger: GCAGGGAGACAGATGAGCGGGCGTCACAGGTCCTCAAAGCGGAGACCCAAAGGCACCTGGAGCTCTCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp GCAGCACACACCTCTGAGTTCCGTTTGGGAGACCCCTaGGGACGCCCAGTGCCCACATCTGCATGGACCCGA +
Preference number: 6 (lower is better)
Translates to: AAHTSEFRLGDP*GRPVPTSAWTR
Trigger: TCGGGTCCATGCAGATGTGGGCACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGTGTGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp CTCTGCATGCCTGCCATCGCCTGCAGCACACACCTCTaGGTTCCGTTTGGGAGACCCCTGAGGACGCCCAGT +
Preference number: 6 (lower is better)
Translates to: LCMPAIACSTHL*VPFGRPLRTPS
Trigger: ACTGGGCGTCCTCAGGGGTCTCCCAAACGGAACTCAGAGGTGTGTGCTGCAGGCGATGGCAGGCATGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp TCTCCAGGGATACCCTGTGGCGGTCCCAGCTCTGCATaGCTGCCATCGCCTGCAGCACACACCTCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: SPGIPCGGPSSA*LPSPAAHTSEF
Trigger: GAACTCAGAGGTGTGTGCTGCAGGCGATGGCAGGCATGCAGAGCTGGGACCGCCACAGGGTATCCCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp CCGGGTGCTGCTGGCCTTGCGGCTGTTGTCCACTGCTaGCTGATACTCACCGAGGTGAACCAAGGTGGAAGC +
Preference number: 6 (lower is better)
Translates to: PGAAGLAAVVHC*LILTEVNQGGS
Trigger: GCTTCCACCTTGGTTCACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS GCA 72 bp CGTCCGGGTGCTGCTGGCCTTGCGGCTGTTGTCCACTaGTGCCTGATACTCACCGAGGTGAACCAAGGTGGA +
Preference number: 6 (lower is better)
Translates to: RPGAAGLAAVVH*CLILTEVNQGG
Trigger: TCCACCTTGGTTCACCTCGGTGAGTATCAGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS CCA 72 bp ACTTCCTGCGCTGTGGAGCAAGCCTGGACCCATGGCTaGGCCATTCCCTATGCCCTGCTGCCCACTGGTGAA +
Preference number: 6 (lower is better)
Translates to: TSCAVEQAWTHG*AIPYALLPTGE
Trigger: TTCACCAGTGGGCAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTTGCTCCACAGCGCAGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp ACTCCACCAAGGACTTCCTGCGCTGTGGAGCAAGCCTaGACCCATGGCTGGGCCATTCCCTATGCCCTGCTG +
Preference number: 6 (lower is better)
Translates to: TPPRTSCAVEQA*THGWAIPYALL
Trigger: CAGCAGGGCATAGGGAATGGCCCAGCCATGGGTCCAGGCTTGCTCCACAGCGCAGGAAGTCCTTGGTGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CTGTCCTACAGGAGGGCAACGGCCTTGAATGGACTCTaGGATGGCCTTTATCAGGGGCTGGGCAGCCCCCTG +
Preference number: 6 (lower is better)
Translates to: LSYRRATALNGL*DGLYQGLGSPL
Trigger: CAGGGGGCTGCCCAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CCACACGTGCCGCCTGTAGGGAGTTGCCATCCACTGTaGTGGGGGAACCAGGGCCCTTGTCAATCCAACCAG +
Preference number: 6 (lower is better)
Translates to: PHVPPVGSCHPL*WGNQGPCQSNQ
Trigger: CTGGTTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CTGGACAAGGAGGTCAGGGTCGGCTTGTGCTGCACGTaGCCACGGCTGCCAGACTGCAAGGAGTACACGGTA +
Preference number: 6 (lower is better)
Translates to: LDKEVRVGLCCT*PRLPDCKEYTV
Trigger: TACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCTCCTTGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CAA 72 bp GCTGCTCTGAGGAAGGCACTGATGGGAGTTTGGGGGTaGTGGGGCTGCTGCAGAGGTGCTGCACTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: AALRKALMGVWG*WGCCRGAALRS
Trigger: GGACCTGAGTGCAGCACCTCTGCAGCAGCCCCACAACCCCCAAACTCCCATCAGTGCCTTCCTCAGAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 72 bp GAGTTGCCATCCACTGTGGTGGGGGAACCAGGGCCCTaGTCAATCCAACCAGTCCATGTCCCCTGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: ELPSTVVGEPGP*SIQPVHVPWQP
Trigger: GGGCTGCCAGGGGACATGGACTGGTTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp CTGCAGCATGCTGCATGGCATCCTGCAGCCAAGGCAAATGCTTGCTaGGGCATCCTGCAGGCAGAGGCTTTGTGCCTGCAGCAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LQHAAWHPAAKANAC*GILQAEALCLQQLG
Trigger: GCCCAGCTGCTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp TGCAGATGGGATGGGGTCACACTGTCCTACAGGAGGGCAACGGCCTaGAATGGACTCTGGGATGGCCTTTATCAGGGGCTGGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: CRWDGVTLSYRRATA*NGLWDGLYQGLGSP
Trigger: GGGGCTGCCCAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAGGACAGTGTGACCCCATCCCATCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp GCCTGTAGGGAGTTGCCATCCACTGTGGTGGGGGAACCAGGGCCCTaGTCAATCCAACCAGTCCATGTCCCCTGGCAGCCCACGAATCTC +
Preference number: 6 (lower is better)
Translates to: ACRELPSTVVGEPGP*SIQPVHVPWQPTNL
Trigger: GAGATTCGTGGGCTGCCAGGGGACATGGACTGGTTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp AGCACCCGCTTGACAGAGTGCAGTCCGGCCTCTAGGTaGAAGTGGAGTGGAAGGTCAGGACACAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: STRLTECSPASR*KWSGRSGHRAS
Trigger: GGAGGCCCTGTGTCCTGACCTTCCACTCCACTTTCACCTAGAGGCCGGACTGCACTCTGTCAAGCGGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp AGGAAGGCACTGATGGGAGTTTGGGGGTTGTGGGGCTaGTGCAGAGGTGCTGCACTCAGGTCCATGGAGCGT +
Preference number: 6 (lower is better)
Translates to: RKALMGVWGLWG*CRGAALRSMER
Trigger: ACGCTCCATGGACCTGAGTGCAGCACCTCTGCAGCAGCCCCACAACCCCCAAACTCCCATCAGTGCCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp GGACAGCTGCCCAGCCAGAGTCTACAGGAGGGCTGCTaGCAGTGGGCACTCCCCATGATGATTTTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GQLPSQSLQEGC*QWALPMMIFWR
Trigger: CCTCCAGAAAATCATCATGGGGAGTGCCCACTGGCAGCAGCCCTCCTGTAGACTCTGGCTGGGCAGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp GCAAAAGGCAGCTACCACCAACCGTATGCTAACAGCTaGACCCCCAGACGCCACTGGGAGCTCCTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: AKGSYHQPYANS*TPRRHWELLRE
Trigger: CTCCCTGAGGAGCTCCCAGTGGCGTCTGGGGGTGCAGCTGTTAGCATACGGTTGGTGGTAGCTGCCTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp AGGTCAGGGTCGGCTTGTGCTGCACGTGGCCACGGCTaGCAGACTGCAAGGAGTACACGGTACCTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: RSGSACAARGHG*QTARSTRYLWD
Trigger: ATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGCCACGTGCAGCACAAGCCGACCCTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CCA 72 bp GCTCTGAGGAAGGCACTGATGGGAGTTTGGGGGTTGTaGGGCTGCTGCAGAGGTGCTGCACTCAGGTCCATG +
Preference number: 6 (lower is better)
Translates to: ALRKALMGVWGL*GCCRGAALRSM
Trigger: CATGGACCTGAGTGCAGCACCTCTGCAGCAGCCCCACAACCCCCAAACTCCCATCAGTGCCTTCCTCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp CCAGCTCAGCATCCCGCGACTCTGCAGCATGCTGCATaGCATCCTGCAGCCAAGGCAAATGCTTGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: PAQHPATLQHAA*HPAAKANACLG
Trigger: GCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp GATACAGGGACACTGCCACTTACCGACCTGCAGGGCTaGGGCCATGTGCAGGGAACACTGTCTGCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: DTGTLPLTDLQG*GHVQGTLSASG
Trigger: GCCAGAAGCAGACAGTGTTCCCTGCACATGGCCCCAGCCCTGCAGGTCGGTAAGTGGCAGTGTCCCTGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp AGGCAAAGCACACCTCCTTCCACGTCCGGGTGCTGCTaGCCTTGCGGCTGTTGTCCACTGCTGCCTGATACT +
Preference number: 6 (lower is better)
Translates to: RQSTPPSTSGCC*PCGCCPLLPDT
Trigger: AGTATCAGGCAGCAGTGGACAACAGCCGCAAGGCCAGCAGCACCCGGACGTGGAAGGAGGTGTGCTTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS CAA 72 bp TCAGGTGAGAGCTCCAGGTGCCTTTGGGTCTCCGCTTaGAGGACCTGTGACGCCCGCTCATCTGTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: SGESSRCLWVSA*RTCDARSSVSL
Trigger: CAGGGAGACAGATGAGCGGGCGTCACAGGTCCTCAAAGCGGAGACCCAAAGGCACCTGGAGCTCTCACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 72 bp CACAAACCACATACCACACGTGCCGCCTGTAGGGAGTaGCCATCCACTGTGGTGGGGGAACCAGGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: HKPHTTRAACRE*PSTVVGEPGPL
Trigger: CAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGGTATGTGGTTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp TGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATGCTaGATGGCATCCTGCAGCCAAGGCAAATGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: WASSASRDSAAC*MASCSQGKCLL
Trigger: AAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp ACAAACCACATACCACACGTGCCGCCTGTAGGGAGTTaGCATCCACTGTGGTGGGGGAACCAGGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: TNHIPHVPPVGS*HPLWWGNQGPC
Trigger: ACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGGTATGTGGTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp CTGTGCTTCTTGTCCGCGCCCTCATTCTCCCAGCACTaGTGTGTGGTGTCAGCTGAGCACCAGCTCAAGCTG +
Preference number: 6 (lower is better)
Translates to: LCFLSAPSFSQH*CVVSAEHQLKL
Trigger: CAGCTTGAGCTGGTGCTCAGCTGACACCACACAGCAGTGCTGGGAGAATGAGGGCGCGGACAAGAAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp GGTCACACTGTCCTACAGGAGGGCAACGGCCTTGAATaGACTCTGGGATGGCCTTTATCAGGGGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GHTVLQEGNGLE*TLGWPLSGAGQ
Trigger: CTGCCCAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAGGACAGTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 72 bp GCTGCATGGCATCCTGCAGCCAAGGCAAATGCTTGCTaGGGCATCCTGCAGGCAGAGGCTTTGTGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: AAWHPAAKANAC*GILQAEALCLQ
Trigger: CTGCAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 72 bp ATGAGCACGCCTGTTGTGCTCCTAGCAGTGTGCACATaGGGACAGCTGCCCAGCCAGAGTCTACAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: MSTPVVLLAVCT*GQLPSQSLQEG
Trigger: GCCCTCCTGTAGACTCTGGCTGGGCAGCTGTCCCAATGTGCACACTGCTAGGAGCACAACAGGCGTGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp ATGGGGTCACACTGTCCTACAGGAGGGCAACGGCCTTaGATGGACTCTGGGATGGCCTTTATCAGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: MGSHCPTGGQRP*MDSGMAFIRGW
Trigger: CCAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAGGACAGTGTGACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp ACTGCTGTGTGGTGTCAGCTGAGCACCAGCTCAAGCTaGCAATCAGCTCACACCCCCATGCCACTGACTGGG +
Preference number: 6 (lower is better)
Translates to: TAVWCQLSTSSS*QSAHTPMPLTG
Trigger: CCCAGTCAGTGGCATGGGGGTGTGAGCTGATTGTCAGCTTGAGCTGGTGCTCAGCTGACACCACACAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp AGCTGTCTCCTGGATGGGTTGGTCTCCTCAAGGACGTaGGCCCAGAGCTCCGGATCCTTTCTGCATACCAGG +
Preference number: 6 (lower is better)
Translates to: SCLLDGLVSSRT*AQSSGSFLHTR
Trigger: CCTGGTATGCAGAAAGGATCCGGAGCTCTGGGCTCACGTCCTTGAGGAGACCAACCCATCCAGGAGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp CATGCTGCATGGCATCCTGCAGCCAAGGCAAATGCTTaGTTGGGCATCCTGCAGGCAGAGGCTTTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: HAAWHPAAKANA*LGILQAEALCL
Trigger: CAGGCACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp GCAGCATGCTGCATGGCATCCTGCAGCCAAGGCAAATaGTTGCTTGGGCATCCTGCAGGCAGAGGCTTTGTG +
Preference number: 6 (lower is better)
Translates to: AACCMASCSQGK*LLGHPAGRGFV
Trigger: CACAAAGCCTCTGCCTGCAGGATGCCCAAGCAAGCATTTGCCTTGGCTGCAGGATGCCATGCAGCATGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp CAGTGCGCTGCTGACAGCGATGCTCGCGATGTCCAGTaGGTCATAGTTGTCCAGGCGGCTGATGTACTCCAT +
Preference number: 6 (lower is better)
Translates to: QCAADSDARDVQ*VIVVQAADVLH
Trigger: ATGGAGTACATCAGCCGCCTGGACAACTATGACGCACTGGACATCGCGAGCATCGCTGTCAGCAGCGCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 72 bp GATGGGGTCACACTGTCCTACAGGAGGGCAACGGCCTaGAATGGACTCTGGGATGGCCTTTATCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: DGVTLSYRRATA*NGLWDGLYQGL
Trigger: CAGCCCCTGATAAAGGCCATCCCAGAGTCCATTCAAGGCCGTTGCCCTCCTGTAGGACAGTGTGACCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp GTACCCCATTCAGAGACCAGGAACCTGAGACCCAGATGTAGTCACTaGCCCAGGGCCACTCCACCTGGAGTTGGCCATGATCCACTGACT +
Preference number: 6 (lower is better)
Translates to: VPHSETRNLRPRCSH*PRATPPGVGHDPLT
Trigger: AGTCAGTGGATCATGGCCAACTCCAGGTGGAGTGGCCCTGGGCAAGTGACTACATCTGGGTCTCAGGTTCCTGGTCTCTGAATGGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp ACTGCATACCACAAACCACATACCACACGTGCCGCCTGTAGGGAGTaGCCATCCACTGTGGTGGGGGAACCAGGGCCCTTGTCAATCCAA +
Preference number: 6 (lower is better)
Translates to: TAYHKPHTTRAACRE*PSTVVGEPGPLSIQ
Trigger: TTGGATTGACAAGGGCCCTGGTTCCCCCACCACAGTGGATGGCAACTCCCTACAGGCGGCACGTGTGGTATGTGGTTTGTGGTATGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 90 bp GTCACATGCTCCTCTTGCTTGCGCAGACTCTCCAAGGCATCCAGTTaGTCCACCTGCAAGGAGGCAAAAGCACGTGAGCACCCGCTTGAC +
Preference number: 6 (lower is better)
Translates to: VTCSSCLRRLSKASS*STCKEAKAREHPLD
Trigger: GTCAAGCGGGTGCTCACGTGCTTTTGCCTCCTTGCAGGTGGACAAACTGGATGCCTTGGAGAGTCTGCGCAAGCAAGAGGAGCATGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp CTGACCCACACTGTTCCTACAAAGGCACCAGGATTCTaGCCCTCAGGTGAGAGCTCCAGGTGCCTTTGGGTC +
Preference number: 6 (lower is better)
Translates to: LTHTVPTKAPGF*PSGESSRCLWV
Trigger: GACCCAAAGGCACCTGGAGCTCTCACCTGAGGGTCAGAATCCTGGTGCCTTTGTAGGAACAGTGTGGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp GGTACACACTCAGAGCGAGCATGGGGTCAGTGGTTTTaGCCAAGTCTCCGAGCTCCTCTGAGCACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GTHSERAWGQWF*PSLRAPLSTPA
Trigger: AGCTGGAGTGCTCAGAGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCATGCTCGCTCTGAGTGTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS TCA 72 bp CCCCCGCTGGCATGCTGCTCATCGATCGCTGCCTCCTaGCCCACACTGTTCCTTGTAGAGATGATCCTTCTT +
Preference number: 6 (lower is better)
Translates to: PPLACCSSIAAS*PTLFLVEMILL
Trigger: AAGAAGGATCATCTCTACAAGGAACAGTGTGGGTCAGGAGGCAGCGATCGATGAGCAGCATGCCAGCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS GCA 72 bp GAAGTCTCCCCCGCTGGCATGCTGCTCATCGATCGCTaGCTCCTGACCCACACTGTTCCTTGTAGAGATGAT +
Preference number: 6 (lower is better)
Translates to: EVSPAGMLLIDR*LLTHTVPCRDD
Trigger: ATCATCTCTACAAGGAACAGTGTGGGTCAGGAGGCAGCGATCGATGAGCAGCATGCCAGCGGGGGAGACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538828.1
CDS CCA 72 bp GTTTGCCCGCCCCTCCAAACCAGCAGAGAGATCATGTaGCTCTCAGAGACAAGTCACCTGGCACCTAGACAC +
Preference number: 6 (lower is better)
Translates to: VCPPLQTSREIM*LSETSHLAPRH
Trigger: GTGTCTAGGTGCCAGGTGACTTGTCTCTGAGAGCCACATGATCTCTCTGCTGGTTTGGAGGGGCGGGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp GGGGCTGGGCCCACGGCAGGGCTTAGTGCAATCAGCTaGGTCTCATTCATGCCCATCAAAATCAAACACGAG +
Preference number: 6 (lower is better)
Translates to: GAGPTAGLSAIS*VSFMPIKIKHE
Trigger: CTCGTGTTTGATTTTGATGGGCATGAATGAGACCCAGCTGATTGCACTAAGCCCTGCCGTGGGCCCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000412649.5
ENST00000427926.6
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS CCA 72 bp ACCCTGGTCGAGCAGGATTCCGAAGTACTGCAGCAATaGAGAAGCCTGGCCAGACTGAGCGGGTATACTCTG +
Preference number: 6 (lower is better)
Translates to: TLVEQDSEVLQQ*RSLARLSGYTL
Trigger: CAGAGTATACCCGCTCAGTCTGGCCAGGCTTCTCCATTGCTGCAGTACTTCGGAATCCTGCTCGACCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 72 bp GTACCACCTGGTCAATTAGCTGTCTCCTGGATGGGTTaGTCTCCTCAAGGACGTGAGCCCAGAGCTCCGGAT +
Preference number: 6 (lower is better)
Translates to: VPPGQLAVSWMG*SPQGREPRAPD
Trigger: ATCCGGAGCTCTGGGCTCACGTCCTTGAGGAGACCAACCCATCCAGGAGACAGCTAATTGACCAGGTGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 72 bp AGGTACACACTCAGAGCGAGCATGGGGTCAGTGGTTTaGACCAAGTCTCCGAGCTCCTCTGAGCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: RYTLRASMGSVV*TKSPSSSEHSS
Trigger: GCTGGAGTGCTCAGAGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCATGCTCGCTCTGAGTGTGTACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 90 bp GCCACGGCTGCCAGACTGCAAGGAGTACACGGTACCTTTGGGATGTaGACACGGGACCAGAAAAGCTCCAGATGCTCCAGCATCTTCTGT +
Preference number: 6 (lower is better)
Translates to: ATAARLQGVHGTFGM*TRDQKSSRCSSIFC
Trigger: ACAGAAGATGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS GCA 72 bp GCTGCTAACTCCATCATCCGCAACAGAAAGGGAATGTaGGCCTCAAAGTCCTGGGGGATCCCCACAAGCACT +
Preference number: 6 (lower is better)
Translates to: AANSIIRNRKGM*ASKSWGIPTST
Trigger: AGTGCTTGTGGGGATCCCCCAGGACTTTGAGGCGCACATTCCCTTTCTGTTGCGGATGATGGAGTTAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp TATCAAACATCTTCATGGGCTGGGAGTCACCTTCCATaGTCCAGTGGTAGACCGCGGTCTCGGTCACCAAGG +
Preference number: 6 (lower is better)
Translates to: YQTSSWAGSHLP*SSGRPRSRSPR
Trigger: CCTTGGTGACCGAGACCGCGGTCTACCACTGGAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp AGCGGCTCCTCGTCCTGCACTAGCATTCGAGAAAACTaGAGGCCCTGTTCCGGACTGATCTTCATTACACCC +
Preference number: 6 (lower is better)
Translates to: SGSSSCTSIREN*RPCSGLIFITP
Trigger: GGGTGTAATGAAGATCAGTCCGGAACAGGGCCTGCAGTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000540896.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp ACAATCTGGCTAATGTTGGCCAGCGGCTCCTCGTCCTaGACTAGCATTCGAGAAAACTGCAGGCCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: TIWLMLASGSSS*TSIRENCRPCS
Trigger: GGAACAGGGCCTGCAGTTTTCTCGAATGCTAGTGCAGGACGAGGAGCCGCTGGCCAACATTAGCCAGATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000540896.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp AAACTTGTGGAAAACGGTGAAGGCCTCCTCATACAGTaGGCTGCTGACAGCGATGCTCGCGATGTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: KLVENGEGLLIQ*AADSDARDVQC
Trigger: GCACTGGACATCGCGAGCATCGCTGTCAGCAGCGCACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 72 bp ACTCTCTGCAGAGATAGGCCGTCGGATCGGAGCCATTaGGTCACTCATGTCAATGATCGTGACCTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: TLCRDRPSDRSH*VTHVNDRDLCL
Trigger: CAGGCACAGGTCACGATCATTGACATGAGTGACCCAATGGCTCCGATCCGACGGCCTATCTCTGCAGAGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 72 bp CACGGCTGCCAGACTGCAAGGAGTACACGGTACCTTTaGGATGTTGACACGGGACCAGAAAAGCTCCAGATG +
Preference number: 6 (lower is better)
Translates to: HGCQTARSTRYL*DVDTGPEKLQM
Trigger: CATCTGGAGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGCAGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CAA 72 bp GCCAGACTGCAAGGAGTACACGGTACCTTTGGGATGTaGACACGGGACCAGAAAAGCTCCAGATGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ARLQGVHGTFGM*TRDQKSSRCSS
Trigger: GCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS CAA 90 bp TTGTCCAGGCGGCTGATGTACTCCATGACCCGTGTGCGGTCTGCCTaGATGGCAGTCAGGATCAACAGATTCTGTAGATTCCTGTGCTCG +
Preference number: 6 (lower is better)
Translates to: LSRRLMYSMTRVRSA*MAVRINRFCRFLCS
Trigger: CGAGCACAGGAATCTACAGAATCTGTTGATCCTGACTGCCATCAAGGCAGACCGCACACGGGTCATGGAGTACATCAGCCGCCTGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 90 bp ATGAATGACGATGTGAAGACCACACAGCTGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAAGCACACCTCCTTCCACGTCCGGGT +
Preference number: 6 (lower is better)
Translates to: MNDDVKTTQLCEAEL*SIHAGKAHLLPRPG
Trigger: ACCCGGACGTGGAAGGAGGTGTGCTTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTTCACATCGTCATTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS TCA 72 bp CCAGACTGCAAGGAGTACACGGTACCTTTGGGATGTTaGCACGGGACCAGAAAAGCTCCAGATGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PDCKEYTVPLGC*HGTRKAPDAPA
Trigger: TGCTGGAGCATCTGGAGCTTTTCTGGTCCCGTGTCAACATCCCAAAGGTACCGTGTACTCCTTGCAGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615606.4
CDS GCA 72 bp TTGAGAGTCATCAGGGAGTCTCACTCAGGCATGCTATaGAGATGGGATGGGGTCACACTGTCCTACAGGAGG +
Preference number: 6 (lower is better)
Translates to: LRVIRESHSGML*RWDGVTLSYRR
Trigger: CCTCCTGTAGGACAGTGTGACCCCATCCCATCTGCATAGCATGCCTGAGTGAGACTCCCTGATGACTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp TTCTGGGCCAGCTCAGCATCCCGCGACTCTGCAGCATaGTGCATGGCATCCTTTGAAAAGAAACTGACTGTC +
Preference number: 6 (lower is better)
Translates to: FWASSASRDSAA*CMASFEKKLTV
Trigger: GACAGTCAGTTTCTTTTCAAAGGATGCCATGCAGCATGCTGCAGAGTCGCGGGATGCTGAGCTGGCCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS CCA 72 bp ATGCTGTCTGTACCACCTGGTCAATTAGCTGTCTCCTaGATGGGTTGGTCTCCTCAAGGACGTGAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: MLSVPPGQLAVS*MGWSPQGREPR
Trigger: TCTGGGCTCACGTCCTTGAGGAGACCAACCCATCCAGGAGACAGCTAATTGACCAGGTGGTACAGACAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 72 bp ATGGCATCCTTTGAAAAGAAACTGACTGTCCAGGTGTaGTCCAGCCGGGGTGAAAGCACCAGCAGCAGGTCA +
Preference number: 6 (lower is better)
Translates to: MASFEKKLTVQV*SSRGESTSSRS
Trigger: TGACCTGCTGCTGGTGCTTTCACCCCGGCTGGACCACACCTGGACAGTCAGTTTCTTTTCAAAGGATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622493.4
CDS CAA 72 bp GATGTGAAGACCACACAGCTGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAAGCACACCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: DVKTTQLCEAEL*SIHAGKAHLLP
Trigger: TGGAAGGAGGTGTGCTTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTTCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS CAA 72 bp GATGTGAAGACCACACAGCTGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAAGCACACCGAGGTGAA +
Preference number: 6 (lower is better)
Translates to: DVKTTQLCEAEL*SIHAGKAHRGE
Trigger: TTCACCTCGGTGTGCTTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTTCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611723.1
ENST00000617103.4
CDS CAA 90 bp TTTGCCCGAAGGTACACACTCAGAGCGAGCATGGGGTCAGTGGTTTaGACCAAGTCTCCGAGCTCCTCTGAGCACTCCAGCTTATCTTCT +
Preference number: 6 (lower is better)
Translates to: FARRYTLRASMGSVV*TKSPSSSEHSSLSS
Trigger: AGAAGATAAGCTGGAGTGCTCAGAGGAGCTCGGAGACTTGGTCAAAACCACTGACCCCATGCTCGCTCTGAGTGTGTACCTTCGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 90 bp ATGAATGACGATGTGAAGACCACACAGCTGTGCGAAGCGGAACTCTaGTCCATCCATGCAGGCAAAGCACACCGAGGTGAACCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: MNDDVKTTQLCEAEL*SIHAGKAHRGEPRW
Trigger: CCACCTTGGTTCACCTCGGTGTGCTTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTTCACATCGTCATTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611723.1
ENST00000617103.4
CDS CCA 72 bp CAGTCCGGTAGTGAATCACCTGGCAGCCCACCAGACTaGTATGTCTATCAAACATCTTCATGGGCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: QSGSESPGSPPD*YVYQTSSWAGS
Trigger: ACTCCCAGCCCATGAAGATGTTTGATAGACATACCAGTCTGGTGGGCTGCCAGGTGATTCACTACCGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 72 bp CGGCTGATGTACTCCATGACCCGTGTGCGGTCTGCCTaGATGGCAGTCAGGATCAACAGATTCTGTAGATTC +
Preference number: 6 (lower is better)
Translates to: RLMYSMTRVRSA*MAVRINRFCRF
Trigger: GAATCTACAGAATCTGTTGATCCTGACTGCCATCAAGGCAGACCGCACACGGGTCATGGAGTACATCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS TCA 72 bp CTCTGCAAAAGCCGCAGCATGGCCTTCTATGGGTTGTaGAACCTTCCTATCCACAGAGTAGAGCTGCATTGC +
Preference number: 6 (lower is better)
Translates to: LCKSRSMAFYGL*NLPIHRVELHC
Trigger: GCAATGCAGCTCTACTCTGTGGATAGGAAGGTTTCACAACCCATAGAAGGCCATGCTGCGGCTTTTGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS TCA 72 bp CATCCTGATAGTCCTCCTCCTCTGTCAGCAGGTGGTTaGGTGCCTCATTCACACTCTTGTTGTTGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: HPDSPPPLSAGG*VPHSHSCCCGS
Trigger: AGAGCCACAACAACAAGAGTGTGAATGAGGCACTCAACCACCTGCTGACAGAGGAGGAGGACTATCAGGATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621271.4
CDS CCA 72 bp GAACACAGACTACTTTCAGGAAAGACACCCGAGGGATaGGAAAACCTGCTCATCATGGTGACAGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: EHRLLSGKTPEG*ENLLIMVTAAS
Trigger: GGAAGCTGCTGTCACCATGATGAGCAGGTTTTCCCATCCCTCGGGTGTCTTTCCTGAAAGTAGTCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CCA 72 bp AGCCCACCAGACTGGTATGTCTATCAAACATCTTCATaGGCTGGGAGTCACCTTCCATGCTCCAGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: SPPDWYVYQTSS*AGSHLPCSSGR
Trigger: TCTACCACTGGAGCATGGAAGGTGACTCCCAGCCCATGAAGATGTTTGATAGACATACCAGTCTGGTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 90 bp CCACGGGCCTCTACTGCCAGGAAGAGATTCAAGCACTTTCTTTCCTaGTGCTGGTTCTCAGAACACAGACTACTTTCAGGAAAGACACCC +
Preference number: 6 (lower is better)
Translates to: PRASTARKRFKHFLS*CWFSEHRLLSGKTP
Trigger: GGGTGTCTTTCCTGAAAGTAGTCTGTGTTCTGAGAACCAGCACAAGGAAAGAAAGTGCTTGAATCTCTTCCTGGCAGTAGAGGCCCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS TCA 72 bp CGGCTTCAGCATAGCTGCCCTGTGCAAAGAGGGTATTaGATTTTCTCACAAACAACTTCTCTGCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: RLQHSCPVQRGY*IFSQTTSLPQP
Trigger: TGGCTGGGGCAGAGAAGTTGTTTGTGAGAAAATTCAATACCCTCTTTGCACAGGGCAGCTATGCTGAAGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp ATCTGCATGAATGACGATGTGAAGACCACACAGCTGTaGGAAGCGGAACTCTTGTCCATCCATGCAGGCAAA +
Preference number: 6 (lower is better)
Translates to: ICMNDDVKTTQL*EAELLSIHAGK
Trigger: TTTGCCTGCATGGATGGACAAGAGTTCCGCTTCGCACAGCTGTGTGGTCTTCACATCGTCATTCATGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000427926.6
ENST00000611723.1
ENST00000615606.4
ENST00000617103.4
ENST00000617926.4
ENST00000621271.4
ENST00000622493.4
CDS CCA 72 bp TTCCCCTCCATCTTGAACTCTGCAAAAGCCGCAGCATaGCCTTCTATGGGTTGTGAAACCTTCCTATCCACA +
Preference number: 6 (lower is better)
Translates to: FPSILNSAKAAA*PSMGCETFLST
Trigger: TGTGGATAGGAAGGTTTCACAACCCATAGAAGGCCATGCTGCGGCTTTTGCAGAGTTCAAGATGGAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 72 bp AGGACCTGGATTGCTGAGGCATTCATATCAAACTTGTaGAAAACGGTGAAGGCCTCCTCATACAGTGCGCTG +
Preference number: 6 (lower is better)
Translates to: RTWIAEAFISNL*KTVKASSYSAL
Trigger: CAGCGCACTGTATGAGGAGGCCTTCACCGTTTTCCACAAGTTTGATATGAATGCCTCAGCAATCCAGGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 90 bp GTGACCTGTGCCTGCTCACCAACTTTCTCTCGGATACATATGAACTaGTCAGATTCCATGGTCAGTGTGCTGAATCCAATGTTAGCTGGA +
Preference number: 6 (lower is better)
Translates to: VTCACSPTFSRIHMN*SDSMVSVLNPMLAG
Trigger: TCCAGCTAACATTGGATTCAGCACACTGACCATGGAATCTGACAAGTTCATATGTATCCGAGAGAAAGTTGGTGAGCAGGCACAGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp AGCCATTGGGTCACTCATGTCAATGATCGTGACCTGTaGCTGCTCACCAACTTTCTCTCGGATACATATGAA +
Preference number: 6 (lower is better)
Translates to: SHWVTHVNDRDL*LLTNFLSDTYE
Trigger: TTCATATGTATCCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATTGACATGAGTGACCCAATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp ATTGGGTCACTCATGTCAATGATCGTGACCTGTGCCTaGTCACCAACTTTCTCTCGGATACATATGAACTTG +
Preference number: 6 (lower is better)
Translates to: IGSLMSMIVTCA*SPTFSRIHMNL
Trigger: CAAGTTCATATGTATCCGAGAGAAAGTTGGTGAGCAGGCACAGGTCACGATCATTGACATGAGTGACCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS GCA 72 bp ATCTACTGCTTTCTTTACAAAAGGTTGGTTTCCCGCTaGAGGCTGTCCAACTTCAATGATGTGCAACTTGCC +
Preference number: 6 (lower is better)
Translates to: IYCFLYKRLVSR*RLSNFNDVQLA
Trigger: GGCAAGTTGCACATCATTGAAGTTGGACAGCCTGCAGCGGGAAACCAACCTTTTGTAAAGAAAGCAGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 72 bp GCCTGCTCACCAACTTTCTCTCGGATACATATGAACTaGTCAGATTCCATGGTCAGTGTGCTGAATCCAATG +
Preference number: 6 (lower is better)
Translates to: ACSPTFSRIHMN*SDSMVSVLNPM
Trigger: CATTGGATTCAGCACACTGACCATGGAATCTGACAAGTTCATATGTATCCGAGAGAAAGTTGGTGAGCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000427926.6
ENST00000449918.1
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CAA 90 bp GAACGGCCAAACGCAGACCAAGGTCTGGATTCTGAAGCACGTTGGTaGCATAATTCACAATGTTATCTTCCTCAACACAAACTGACAGTA +
Preference number: 6 (lower is better)
Translates to: ERPNADQGLDSEARW*HNSQCYLPQHKLTV
Trigger: TACTGTCAGTTTGTGTTGAGGAAGATAACATTGTGAATTATGCAACCAACGTGCTTCAGAATCCAGACCTTGGTCTGCGTTTGGCCGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS TCA 72 bp ATCATTGACAAAATAACACCTGCACCTGACCAGTCCTaGAGAAGCCTGCACTTTCTGTGGCCATTCTCTATT +
Preference number: 6 (lower is better)
Translates to: IIDKITPAPDQS*RSLHFLWPFSI
Trigger: AATAGAGAATGGCCACAGAAAGTGCAGGCTTCTTCAGGACTGGTCAGGTGCAGGTGTTATTTTGTCAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp ACTGCCAGGAAGAGATTCAAGCACTTTCTTTCCTTGTaGTGGTTCTCAGAACACAGACTACTTTCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: TARKRFKHFLSL*WFSEHRLLSGK
Trigger: CTTTCCTGAAAGTAGTCTGTGTTCTGAGAACCAGCACAAGGAAAGAAAGTGCTTGAATCTCTTCCTGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS GCA 72 bp GGCATAGAGCACAATTTTCTGGAATTGGCCTGTTTCTaGAAAACACTGGATCACTTTGCTTGGCACATTTGC +
Preference number: 6 (lower is better)
Translates to: GIEHNFLELACF*KTLDHFAWHIC
Trigger: GCAAATGTGCCAAGCAAAGTGATCCAGTGTTTTGCAGAAACAGGCCAATTCCAGAAAATTGTGCTCTATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS CCA 72 bp AGAGTCATCCTCCCTATAGCTGTTAGAAGGATTCAGTaGATCTGTGAATACTCCTACTATGTGTTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: RVILPIAVRRIQ*ICEYSYYVFSK
Trigger: TTTGCTGAACACATAGTAGGAGTATTCACAGATCCACTGAATCCTTCTAACAGCTATAGGGAGGATGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412649.5
CDS CAA 72 bp AACGCAGACCAAGGTCTGGATTCTGAAGCACGTTGGTaGCATAATTCACAATGTTATCTTCCTCAACACAAA +
Preference number: 6 (lower is better)
Translates to: NADQGLDSEARW*HNSQCYLPQHK
Trigger: TTTGTGTTGAGGAAGATAACATTGTGAATTATGCAACCAACGTGCTTCAGAATCCAGACCTTGGTCTGCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000427926.6
ENST00000615606.4
ENST00000617103.4
ENST00000621271.4
CDS TCA 72 bp ATTTTTGTTTGGTTTCCTGTTCTGCCTAAAGCTGCATaGCCATTTCACTTCAGTCAGAAGCAATCAGGTACT +
Preference number: 6 (lower is better)
Translates to: IFVWFPVLPKAA*PFHFSQKQSGT
Trigger: AGTACCTGATTGCTTCTGACTGAAGTGAAATGGTCATGCAGCTTTAGGCAGAACAGGAAACCAAACAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611723.1