RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLTC (Homo sapiens)

Ensembl gene IDs: ENSG00000141367

Ensembl transcript IDs: ENST00000269122.8, ENST00000393043.5, ENST00000466513.1, ENST00000472129.3, ENST00000472651.5, ENST00000475458.1, ENST00000483176.2, ENST00000498711.1, ENST00000579456.5, ENST00000580081.1, ENST00000584313.5, ENST00000585198.1, ENST00000621829.4

Found 634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAGTACGAAGAATTCCCTTTGGTGCATTAGCAGCCACCTTTGCTaGCTCCGAGTAATTTCCCTGGGCAAAAAGAGCATTAAATTTCCG +
Preference number: 1 (lower is better)
Translates to: WSTKNSLWCISSHLC*LRVISLGKKSIKFP
Trigger: CGGAAATTTAATGCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGTACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR TCA 90 bp TTTTTCAATAATCTGGGAAGCACTGCAATCCAGTGTACGATGTGCTaGTTAGTGTTGTCTTTGTTGGCACTGACAGTCTTGCATGGTCAT +
Preference number: 1 (lower is better)
Translates to: FFNNLGSTAIQCTMC*LVLSLLALTVLHGH
Trigger: ATGACCATGCAAGACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCAGTGCTTCCCAGATTATTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR TCA 90 bp GATACAATCCTAATAATTACTATGTTATACCAGTTACCCAGAATATaGGGCAGAGGGTCCCAACTCCCCAAGCCACATAGCTTCCTGATA +
Preference number: 1 (lower is better)
Translates to: DTILIITMLYQLPRI*GRGSQLPKPHSFLI
Trigger: TATCAGGAAGCTATGTGGCTTGGGGAGTTGGGACCCTCTGCCTCATATTCTGGGTAACTGGTATAACATAGTAATTATTAGGATTGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GGCTGGGCTGGGACACTCTGGAACCGACGGATAGTGTCTGGAGTACGAAGAATTGGTTTCCCCACATACTaGATCCACAGTTTTATCGTT +
Preference number: 2 (lower is better)
Translates to: GWAGTLWNRRIVSGVRRIGFPTY*IHSFIV
Trigger: AACGATAAAACTGTGGATTCAGTATGTGGGGAAACC...AATTCTTCGTACTCCAGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR-3UTR CCA 90 bp ACGTTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACATGGGCTGGGACACTCTaGAACCGACGGATAGTGTCT +
Preference number: 2 (lower is better)
Translates to: TLALRYTLSANVGSTDFTWAGTL*NRRIVS
Trigger: AGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCA...TGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR-3UTR GCA 90 bp GGCTGGGCTGGGACACTCTGGAACCGACGGATAGTGTCTGGAGTACGAAGAATTGTCCTTAGTAAGATCTaGTACAGGAAACAGAAAAGG +
Preference number: 2 (lower is better)
Translates to: GWAGTLWNRRIVSGVRRIVLSKI*YRKQKR
Trigger: CCTTTTCTGTTTCCTGTAGCAGATCTTACTAAGGAC...AATTCTTCGTACTCCAGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR-3UTR TCA 90 bp ATTTCCGGGCAAAGAGTTCTTCAGCACCGGCTAAGTTATTACGTACAGCCATTCTTCTTCCACACACACTaGCAGAACCTTAGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: ISGQRVLQHRLSYYVQPFFFHTH*QNLRFP
Trigger: GGGAAACCTAAGGTTCTGTCAGTGTGTGTGGAAGAA...GAATGGCTGTACGTAATAACTTAGCCGGTGCTGAAGAACTCTTTGCCCGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR-3UTR GCA 90 bp CCTGGTCCAAAAGGATACCAAAGTACTGAAGTAGAGGAGAAGTTTGACCTGGCTAAGAATTCCCTTTGGTaGATTAGCAGCCACCTTTGC +
Preference number: 2 (lower is better)
Translates to: PGPKGYQSTEVEEKFDLAKNSLW*ISSHLC
Trigger: GCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTT...AGCCAGGTCAAACTTCTCCTCTACTTCAGTACTTTGGTATCCTTTTGGACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR-3UTR CCA 90 bp ACGTTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACATTGTTGAGCTGTCCCTaGTCCAAAAGGATACCAAAG +
Preference number: 2 (lower is better)
Translates to: TLALRYTLSANVGSTDFTLLSCP*SKRIPK
Trigger: CTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAA...TGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTCCCCCATTATAAACTaGGAAGTGGGTAAAGACGAT +
Preference number: 2 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSPIIN*EVGKDD
Trigger: ATCGTCTTTACCCACTTCTCAGTTTATAATGGGGGA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGTGCAAAAGCAGTGGTaGGGAAAACTGATGGCACCT +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSVQKQW*GKLMAP
Trigger: AGGTGCCATCAGTTTTCCCCACCACTGCTTTTGCAC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCAGTACGAAAATAGGTaGCTACAGGATCAGCGCTTC +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSQYENR*LQDQRF
Trigger: GAAGCGCTGATCCTGTAGTCACCTATTTTCGTACTG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGGCTCAGGTAATTTCTaGGGTTTGCCTCAGATAGAC +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSGSGNF*GLPQID
Trigger: GTCTATCTGAGGCAAACCTCAGAAATTACCTGAGCC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCAGTACGAAAATAGGTaGCTACAGGATCAGCGCTTC +
Preference number: 2 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNQYENR*LQDQRF
Trigger: GAAGCGCTGATCCTGTAGTCACCTATTTTCGTACTG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGGCACCTGTTACATATaGAGTGAGCAAAACATACTA +
Preference number: 2 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGGTCYI*SEQNIL
Trigger: TAGTATGTTTTGCTCACTTCATATGTAACAGGTGCC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTAGCATTTTCTATATaGATAATGGGGAAACCTGCA +
Preference number: 2 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLAFSI*IMGKPA
Trigger: TGCAGGTTTCCCCATTATGCATATAGAAAATGCTAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTCTGTGTTGATATTTaGACTGAGGGTGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLCVDI*TEGAKA
Trigger: TGCTTTTGCACCCTCAGTGCAAATATCAACACAGAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGCCACCACACCTGGTaGGACAGGGATTTTAAGTTT +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISHHTW*DRDFKF
Trigger: AAACTTAAAATCCCTGTCCCACCAGGTGTGGTGGCT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCCCCCATTATAAACTaGGAAGTGGGTAAAGACGAT +
Preference number: 2 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSPIIN*EVGKDD
Trigger: ATCGTCTTTACCCACTTCTCAGTTTATAATGGGGGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTGTCTTTGTTGGCACTaGCAGTCTTGCATGGTCATA +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKICLCWH*QSCMVI
Trigger: TATGACCATGCAAGACTGTCAGTGCCAACAAAGACA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCAGTGTACGATGTGCTaGTTAGTGTTGTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNQCTMC*LVLSLL
Trigger: CAACAAAGACAACACTAATCAGCACATCGTACACTG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGGCACCTGTTACATATaGAGTGAGCAAAACATACTA +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSGTCYI*SEQNIL
Trigger: TAGTATGTTTTGCTCACTTCATATGTAACAGGTGCC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTAAACACTACAGAGTaGAAATCAGGTTCTTCACAA +
Preference number: 2 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLNTTE*KSGSSQ
Trigger: TTGTGAAGAACCTGATTTGCACTCTGTAGTGTTTAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTCCTCTTCCTTTCATaGCTCCCTAATGCCTCAGTA +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIFLFLS*LPNASV
Trigger: TACTGAGGCATTAGGGAGGCATGAAAGGAAGAGGAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCTCACTACAACCTTTaGCTCACAGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAHYNL*LTGSSD
Trigger: ATCACTTGAACCTGTGAGGCAAAGGTTGTAGTGAGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTACAAGATTGGAATCATaGTGCTCTTTGCTCCTGAAT +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSTRLES*CSLLLN
Trigger: ATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGCCATAAGCAAGAGCTaGATTCACACAACCAATTTT +
Preference number: 2 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSAISKS*IHTTNF
Trigger: AAAATTGGTTGTGTGAATCCAGCTCTTGCTTATGGC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCAGTGTACGATGTGCTaGTTAGTGTTGTCTTTGTTG +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIQCTMC*LVLSLL
Trigger: CAACAAAGACAACACTAATCAGCACATCGTACACTG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCTTGCATGGTCATATaGCAGTGTTTTTGCTTTAGC +
Preference number: 2 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSCMVI*QCFCFS
Trigger: GCTAAAGCAAAAACACTGGCATATGACCATGCAAGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAAACACACACAAGATTaGAATCATGGTGCTCTTTGC +
Preference number: 2 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNKHTQD*NHGALC
Trigger: GCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGGTATGTGTAGCTATTaGGGATTAAGGGATAGTGAA +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIGMCSY*GLRDSE
Trigger: TTCACTATCCCTTAATCCTCAATAGCTACACATACC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTACAAGATTGGAATCATaGTGCTCTTTGCTCCTGAAT +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKITRLES*CSLLLN
Trigger: ATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTTCTGTACACTCAGTaGTCTAAAACACCACAATAT +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILLYTQ*SKTPQY
Trigger: ATATTGTGGTGTTTTAGATCACTGAGTGTACAGAAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCATTTTTCAATAATCTaGGAAGCACTGCAATCCAGT +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIHFSII*EALQSS
Trigger: ACTGGATTGCAGTGCTTCCCAGATTATTGAAAAATG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTATTCTTCACTGACCTaGACTCACATTAAACACTTT +
Preference number: 2 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIYSSLT*THIKHF
Trigger: AAAGTGTTTAATGTGAGTGCAGGTCAGTGAAGAATA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR CCA 72 bp CTGGGCTGGGACACTCTGGAACCGACGGATAGTGTCTaGAGTACGAAGAATTCCCTTTGGTGCATTAGCAGC +
Preference number: 3 (lower is better)
Translates to: LGWDTLEPTDSV*STKNSLWCISS
Trigger: GCTGCTAATGCACCAAAGGGAATTCTTCGTACTCCAGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR GCA 72 bp ACGAAGAATTCCCTTTGGTGCATTAGCAGCCACCTTTaGTGCCTCCGAGTAATTTCCCTGGGCAAAAAGAGC +
Preference number: 3 (lower is better)
Translates to: TKNSLWCISSHL*CLRVISLGKKS
Trigger: GCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR CCA 72 bp GTGTTGATATTTGCACTGAGGGTGCAAAAGCAGTGGTaGGGAAAACTGATGGCACCTCCCACAAATCAAAGC +
Preference number: 3 (lower is better)
Translates to: VLIFALRVQKQW*GKLMAPPTNQS
Trigger: GCTTTGATTTGTGGGAGGTGCCATCAGTTTTCCCCACCACTGCTTTTGCACCCTCAGTGCAAATATCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR GCA 72 bp AAGAATTCCCTTTGGTGCATTAGCAGCCACCTTTGCTaGCTCCGAGTAATTTCCCTGGGCAAAAAGAGCATT +
Preference number: 3 (lower is better)
Translates to: KNSLWCISSHLC*LRVISLGKKSI
Trigger: AATGCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR TCA 72 bp AATCTGGGAAGCACTGCAATCCAGTGTACGATGTGCTaGTTAGTGTTGTCTTTGTTGGCACTGACAGTCTTG +
Preference number: 3 (lower is better)
Translates to: NLGSTAIQCTMC*LVLSLLALTVL
Trigger: CAAGACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCAGTGCTTCCCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CAA 90 bp TTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACAAGAAAGGATTCGTATTTGTaGAGCTGTCCCTGGTCCAAA +
Preference number: 3 (lower is better)
Translates to: LALRYTLSANVGSTDFTRKDSYL*SCPWSK
Trigger: TTTGGACCAGGGACAGCTCAACAAATACGAATCCTT...TCTTGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR TCA 72 bp CTAATAATTACTATGTTATACCAGTTACCCAGAATATaGGGCAGAGGGTCCCAACTCCCCAAGCCACATAGC +
Preference number: 3 (lower is better)
Translates to: LIITMLYQLPRI*GRGSQLPKPHS
Trigger: GCTATGTGGCTTGGGGAGTTGGGACCCTCTGCCTCATATTCTGGGTAACTGGTATAACATAGTAATTATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR GCA 72 bp GCCCATTTTAAGTGGCTCCACCTCTCTATGGTTAACTaGAATATAAGCAGCGTTATAGCACCATCTCAAGGT +
Preference number: 3 (lower is better)
Translates to: AHFKWLHLSMVN*NISSVIAPSQG
Trigger: ACCTTGAGATGGTGCTATAACGCTGCTTATATTGCAGTTAACCATAGAGAGGTGGAGCCACTTAAAATGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGGTTACAAGAACACGTaGCCTGTTTTCCCCCATTAT +
Preference number: 3 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGGYKNT*PVFPHY
Trigger: ATAATGGGGGAAAACAGGCAACGTGTTCTTGTAACC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTAGTGTTGTCTTTGTaGGCACTGACAGTCTTGCAT +
Preference number: 3 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLVLSL*ALTVLH
Trigger: ATGCAAGACTGTCAGTGCCAACAAAGACAACACTAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR TCA 72 bp GCAAGACTAACTAGGCAAGGGGGTATGTGTAGCTATTaGGGATTAAGGGATAGTGAAATGAACTTTAGGAAC +
Preference number: 3 (lower is better)
Translates to: ARLTRQGGMCSY*GLRDSEMNFRN
Trigger: GTTCCTAAAGTTCATTTCACTATCCCTTAATCCTCAATAGCTACACATACCCCCTTGCCTAGTTAGTCTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR TCA 72 bp TTTAACCATTTCTCCAAAAGCTGTTTTCGCCCTTGCTaGAGTACAGGCCTACAAAGCTCTAAGGATTCGTAT +
Preference number: 3 (lower is better)
Translates to: FNHFSKSCFRPC*STGLQSSKDSY
Trigger: ATACGAATCCTTAGAGCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTTTTGGAGAAATGGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR TCA 72 bp ACAAGAACACGTTGCCTGTTTTCCCCCATTATAAACTaGGAAGTGGGTAAAGACGATGTTTCAGTACGAAAA +
Preference number: 3 (lower is better)
Translates to: TRTRCLFSPIIN*EVGKDDVSVRK
Trigger: TTTTCGTACTGAAACATCGTCTTTACCCACTTCTCAGTTTATAATGGGGGAAAACAGGCAACGTGTTCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000579456.5
ENST00000621829.4
3UTR-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTAGTGTTGTCTTTGTaGGCACTGACAGTCTTGCAT +
Preference number: 3 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLVLSL*ALTVLH
Trigger: ATGCAAGACTGTCAGTGCCAACAAAGACAACACTAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR TCA 72 bp CACTACAGAGTGCAAATCAGGTTCTTCACAACAGATTaGATATTGAGCAGTTCTTTAAAGAAAGAGGGGGAA +
Preference number: 3 (lower is better)
Translates to: HYRVQIRFFTTD*ILSSSLKKEGE
Trigger: TTCCCCCTCTTTCTTTAAAGAACTGCTCAATATTCAATCTGTTGTGAAGAACCTGATTTGCACTCTGTAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR TCA 72 bp ACACACACTGACAGAACCTTAGGTTTCCCCACATACTaGATCCACAGTTTTATCGTTATCATACTTAAAGAC +
Preference number: 3 (lower is better)
Translates to: THTDRTLGFPTY*IHSFIVIILKD
Trigger: GTCTTTAAGTATGATAACGATAAAACTGTGGATTCAGTATGTGGGGAAACCTAAGGTTCTGTCAGTGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483176.2
3UTR GCA 72 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTaGATGTACCTTGTTAATGAACTACAGGAATGCACA +
Preference number: 3 (lower is better)
Translates to: SHYSSDSGSLDY*MYLVNELQECT
Trigger: TGTGCATTCCTGTAGTTCATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR CCA 72 bp ATTAGTGTTGTCTTTGTTGGCACTGACAGTCTTGCATaGTCATATGCCAGTGTTTTTGCTTTAGCTTTTCTT +
Preference number: 3 (lower is better)
Translates to: ISVVFVGTDSLA*SYASVFALAFL
Trigger: AAGAAAAGCTAAAGCAAAAACACTGGCATATGACCATGCAAGACTGTCAGTGCCAACAAAGACAACACTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAAACCTCGGTGTCACTaGGTTAAAATATTGGAGACA +
Preference number: 3 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIKPRCH*VKILET
Trigger: TGTCTCCAATATTTTAACCAAGTGACACCGAGGTTT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
3UTR TCA 72 bp CAAGTTAATATAACAGCCATGATTTGTTCATTTAAGTaGAATGCTTCGATAAAAACCTCGGTGTCACTTGGT +
Preference number: 3 (lower is better)
Translates to: QVNITAMICSFK*NASIKTSVSLG
Trigger: ACCAAGTGACACCGAGGTTTTTATCGAAGCATTTCACTTAAATGAACAAATCATGGCTGTTATATTAACTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGAGGGGCTGCGGGGCAGTaGCTGCCCGGGCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SFHLKLCKASCMSFNGLRGAAGQ*LPGLSK
Trigger: CTTGGAGAGCCCGGGCAGCCACTGCCCCGCAGCCCC...TCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR GCA 90 bp GTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTTGGCCCCGAACTGCAAAATCCTGTCACTGGGGCTaGGGGGCAGTGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: VPTSIICNFPPAWPRTAKSCHWG*GAVAAR
Trigger: CCGGGCAGCCACTGCCCCGCAGCCCCAGTGACAGGA...TTTTGCAGTTCGGGGCCAAGCTGGAGGGAAGTTACATATTATTGAAGTTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGGGGCTGCGGGGCAGTaGCTGCCCGGGCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGGAAGQ*LPGLSK
Trigger: CTTGGAGAGCCCGGGCAGCCACTGCCCCGCAGCCCC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTCCTGTCACTGGGGCTaGGGGGCAGTGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSCHWG*GAVAAR
Trigger: CCGGGCAGCCACTGCCCCGCAGCCCCAGTGACAGGA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGGGGCTGCGGGGCAGTaGCTGCCCGGGCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSGAAGQ*LPGLSK
Trigger: CTTGGAGAGCCCGGGCAGCCACTGCCCCGCAGCCCC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTCCTGTCACTGGGGCTaGGGGGCAGTGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSCHWG*GAVAAR
Trigger: CCGGGCAGCCACTGCCCCGCAGCCCCAGTGACAGGA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTTGGCCCCGAACTGCAAAACGAATTGGCAGAATCTaGGCCATGGCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: VPTSIICNFPPAWPRTAKRIGRI*AMALSG
Trigger: CCCCGACAGCGCCATGGCCCAGATTCTGCCAATTCG...TTTTGCAGTTCGGGGCCAAGCTGGAGGGAAGTTACATATTATTGAAGTTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp ACGTTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACATTGACCTGGCTGGGCTaGGACACTCTGGAACCGACG +
Preference number: 4 (lower is better)
Translates to: TLALRYTLSANVGSTDFTLTWLG*DTLEPT
Trigger: CGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAA...TGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGGGGCTGCGGGGCAGTaGCTGCCCGGGCTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHGAAGQ*LPGLSK
Trigger: CTTGGAGAGCCCGGGCAGCCACTGCCCCGCAGCCCC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGACTCCGGAAACGGCTaGGCCCAGCGGAAGGATCCC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSDSGNG*AQRKDP
Trigger: GGGATCCTTCCGCTGGGCTCAGCCGTTTCCGGAGTC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTCCTGTCACTGGGGCTaGGGGGCAGTGGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSCHWG*GAVAAR
Trigger: CCGGGCAGCCACTGCCCCGCAGCCCCAGTGACAGGA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGAATTCGGGGCGCAGTaGGCCCGGTGCCTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNEFGAQ*ARCLAS
Trigger: GGAAGCGAGGCACCGGGCGCACTGCGCCCCGAATTC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621829.4
CDS-3UTR CCA 90 bp GATTCTTCTGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTCGCTGTCGGGGGTTATaGTCTCCTCCTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: DSSAFPSILNCAKLAACPRCRGL*SPPVTG
Trigger: CCCAGTGACAGGAGGAGACCATAACCCCCGACAGCG...AGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCAGAAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp GATTCTTCTGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTGCAGAATCTGGGCCATaGCGCTGTCGGGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: DSSAFPSILNCAKLAACPAESGP*RCRGLW
Trigger: CCATAACCCCCGACAGCGCCATGGCCCAGATTCTGC...AGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCAGAAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGCAGAATCTGGGCCATaGCGCTGTCGGGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGAESGP*RCRGLW
Trigger: CCATAACCCCCGACAGCGCCATGGCCCAGATTCTGC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGTCTCCTCCTGTCACTaGGGCTGCGGGGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNVSSCH*GCGAVA
Trigger: AGCCACTGCCCCGCAGCCCCAGTGACAGGAGGAGAC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TCTAGCAACCAGTCCTTAGTAAGATCTGCTACAGGAAACAGAAAAGGCTCCAGTTGGGCTGGGACACTCTaGAACCGACGGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSNQSLVRSATGNRKGSSWAGTL*NRRIVS
Trigger: AGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCA...ACTGGAGCCTTTTCTGTTTCCTGTAGCAGATCTTACTAAGGACTGGTTGCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTGGGCTGGGACACTCTaGAACCGACGGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSWAGTL*NRRIVS
Trigger: AGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGAGGGACGGCAACACTaGGTCCTGCTGTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGEGRQH*VLLSAS
Trigger: TGATGCTGACAGCAGGACCCAGTGTTGCCGTCCCTC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGGTTCCCTGTAGGTGGTGTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTGATGGCGCTGTCTGCTaGAATTGGTCTTCGAATTGG +
Preference number: 4 (lower is better)
Translates to: WFPVGGVPTSIICNFPPADGAVC*NWSSNW
Trigger: CCAATTCGAAGACCAATTTCAGCAGACAGCGCCATC...AGCTGGAGGGAAGTTACATATTATTGAAGTTGGCACACCACCTACAGGGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTGGGCTTTTGCAAGTTaGCTCCAGACCGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSWAFAS*LQTAGS
Trigger: TGAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGACTCCGGAAACGGCTaGGCCCAGCGGAAGGATCCC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHDSGNG*AQRKDP
Trigger: GGGATCCTTCCGCTGGGCTCAGCCGTTTCCGGAGTC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGACTGTGCAAAGCTAGCTaGATGTCCTTCAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: SFHLKLCKASCMSFNGLRLCKAS*MSFNGL
Trigger: CAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAG...TCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGCAGCCACCTTTGCTaGCTCCGAGTAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSSHLC*LRVISL
Trigger: CAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCAGCCACCTTTGCTGCCTCCGAGTAATTTCCCTGGGCAAAAAGAGCATTAAAATTAGCAGCCACCTTTaGTGCCTCCGAGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: SSHLCCLRVISLGKKSIKISSHL*CLRVIS
Trigger: GGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAAT...TTTAATGCTCTTTTTGCCCAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGTCTCCTGTAAGGATTaGTTTCCAGCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSVSCKD*FPAARC
Trigger: GCAGCGTGCTGCTGGAAAGCAATCCTTACAGGAGAC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGCCCCATCAACAGCTaGCTGATATTCACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSPINS*LIFTQV
Trigger: CACCTGGGTGAATATCAGGCAGCTGTTGATGGGGCT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGCGCTTCATCTCACATaGTGTACCCAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSALHLT*CTQSQA
Trigger: AGCCTGGCTTTGGGTACAGCATGTGAGATGAAGCGC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCGCTGTCGGGGGTTATaGTCTCCTCCTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSRCRGL*SPPVTG
Trigger: CCCAGTGACAGGAGGAGACCATAACCCCCGACAGCG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCGAATTGGCAGAATCTaGGCCATGGCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSRIGRI*AMALSG
Trigger: CCCCGACAGCGCCATGGCCCAGATTCTGCCAATTCG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTGACCTGGCTGGGCTaGGACACTCTGGAACCGACG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLTWLG*DTLEPT
Trigger: CGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAGGAGAAGTTTGACCTaGCTGGGCTGGGACACTCTG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGRRSLT*LGWDTL
Trigger: CAGAGTGTCCCAGCCCAGCCAGGTCAAACTTCTCCT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp CAGATTTCTAGCAACCAGTCCTTAGTAAGATCTGCTACAGGAAACAGAAAAGGCAGGAGAAGTTTGACCTaGCTGGGCTGGGACACTCTG +
Preference number: 4 (lower is better)
Translates to: QISSNQSLVRSATGNRKGRRSLT*LGWDTL
Trigger: CAGAGTGTCCCAGCCCAGCCAGGTCAAACTTCTCCT...GCCTTTTCTGTTTCCTGTAGCAGATCTTACTAAGGACTGGTTGCTAGAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGCTGCCCCACAATTCTaGATCCTTTCGACGTACCAG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSAAPQF*ILSTYQ
Trigger: CTGGTACGTCGAAAGGATCCAGAATTGTGGGGCAGC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCCCAAAGCCAGGCTGTaGCTGTCCATACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSPKARL*LSIRWC
Trigger: GCACCACCGTATGGACAGCCACAGCCTGGCTTTGGG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGAAGCTGGAGATGCTCCTaGAAACGAATTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: SFHLKLCKASCMSFNGLRSWRCS*KRIGRI
Trigger: GATTCTGCCAATTCGTTTTCAGGAGCATCTCCAGCT...TCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCAATGTTTGCTGGGTTaGTACCCAGGTTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSQCLLG*YPGSGA
Trigger: AGCTCCAGAACCTGGGTATCAACCCAGCAAACATTG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACAAGATGTTTTCGCCCTTGCTaGAGTACAGGCCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: LALRYTLSANVGSTDFTRCFRPC*STGLQS
Trigger: GCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACA...TCTTGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTCCTCACAGCCCTCATaGATTCTGGCCTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSSQPS*ILASSQ
Trigger: TTGGCTAGAGGCCAGAATTCATGAGGGCTGTGAGGA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGTAAACATTCCCATGTaGGCTCGCTCAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSVNIPM*ARSSPS
Trigger: ACTGGGACTTGAGCGAGCTCACATGGGAATGTTTAC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAGTTACCCAGAATATaGGGCAGAGGGTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQLPRI*GRGSQL
Trigger: GAGTTGGGACCCTCTGCCTCATATTCTGGGTAACTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCATGTTCACCTTCCCTaGCCCATACTGGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGHVHLP*PILAKG
Trigger: ACCTTTGGCCAGTATGGGTCAGGGAAGGTGAACATG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAACCATTTCTCCAAAAGCTGTTTTCGCCCTTGCTGAAGTACAGGCCTACAAAAGCAGCCACCTTTGCTaGCTCCGAGTAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LTISPKAVFALAEVQAYKSSHLC*LRVISL
Trigger: CAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCT...TTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTTTTGGAGAAATGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGTCTCCTGTAAGGATTaGTTTCCAGCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGVSCKD*FPAARC
Trigger: GCAGCGTGCTGCTGGAAAGCAATCCTTACAGGAGAC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTGCAACTGGGCTTTTaGAAGTTGACTCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLQLGF*KLTPDR
Trigger: GCGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTCAAGTCCCAGTGCTaGTTCCAACATGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLKSQC*FQHGDQ
Trigger: CTGATCACCATGTTGGAAGCAGCACTGGGACTTGAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGGCAACACTGGGTCCTaGTGTCAGCATCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSGNTGS*CQHQLG
Trigger: CCCCAGTTGATGCTGACAGCAGGACCCAGTGTTGCC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCGCTGTCGGGGGTTATaGTCTCCTCCTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNRCRGL*SPPVTG
Trigger: CCCAGTGACAGGAGGAGACCATAACCCCCGACAGCG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCGAATTGGCAGAATCTaGGCCATGGCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNRIGRI*AMALSG
Trigger: CCCCGACAGCGCCATGGCCCAGATTCTGCCAATTCG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp CATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGACACTTTCTCCTGAAAACGAATTaGCAGAATCTGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: HLKLCKASCMSFNGLRHFLLKTN*QNLGHG
Trigger: GCCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAG...AAAGTGTCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp TCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGAGAAGCCAATGTTTGCTaGGTTGATACCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SFHLKLCKASCMSFNGLREANVC*VDTQVL
Trigger: CAGAACCTGGGTATCAACCCAGCAAACATTGGCTTC...TCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGTGTGATCCAACCGTaGAGACAGCACCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSVIQP*RQHHQQ
Trigger: TTGCTGATGGTGCTGTCTCCACGGTTGGATCACACT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCCCAAAGCCAGGCTGTaGCTGTCCATACGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNPKARL*LSIRWC
Trigger: GCACCACCGTATGGACAGCCACAGCCTGGCTTTGGG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAGGATGGCATGGGGTaGCTAAGTAACTGTCATGGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQDGMG*LSNCHG
Trigger: GCCATGACAGTTACTTAGCCACCCCATGCCATCCTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGATGGCGCTGTCTGCTaGAATTGGTCTTCGAATTGG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGDGAVC*NWSSNW
Trigger: CCAATTCGAAGACCAATTTCAGCAGACAGCGCCATC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp ACGTTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACAAGGATTCGTATTTGTTaGGCTGTCCCTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: TLALRYTLSANVGSTDFTRIRIC*AVPGPK
Trigger: TTTTGGACCAGGGACAGCTCAACAAATACGAATCCT...TGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTACTTCTTCAGGGTCCTaGGTCTCAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSTSSGS*VSDKAV
Trigger: AACAGCTTTGTCTGAGACTCAGGACCCTGAAGAAGT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGCCTTTACAGTTACTaGCACTTCTTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSLYSY*HFFRVL
Trigger: CAGGACCCTGAAGAAGTGTCAGTAACTGTAAAGGCT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTGACTGCACGAGTGTaGTCCAACCGTGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLTARV*SNRGDS
Trigger: GCTGTCTCCACGGTTGGATCACACTCGTGCAGTCAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGCATGGCAAAATCCATaGTATTGTGCCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSAWQNP*YCASMQ
Trigger: CTGCATGGAGGCACAATATCATGGATTTTGCCATGC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCAGTACGAAAATAGGTaGCTACAGGATCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSQYENR*LQDQRF
Trigger: GAAGCGCTGATCCTGTAGTCACCTATTTTCGTACTG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACAAGATTCTTCCACACACACTaGCAGAACCTTAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: LALRYTLSANVGSTDFTRFFHTH*QNLRFP
Trigger: GGGAAACCTAAGGTTCTGTCAGTGTGTGTGGAAGAA...TCTTGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTGTGCAAAGCTAGCTaGATGTCCTTCAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLCKAS*MSFNGL
Trigger: CAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCGCTGTCGGGGGTTATaGTCTCCTCCTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRCRGL*SPPVTG
Trigger: CCCAGTGACAGGAGGAGACCATAACCCCCGACAGCG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCAGAATCTGGGCCATaGCGCTGTCGGGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAESGP*RCRGLW
Trigger: CCATAACCCCCGACAGCGCCATGGCCCAGATTCTGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGCAGAATCTGGGCCATaGCGCTGTCGGGGGTTATGG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSAESGP*RCRGLW
Trigger: CCATAACCCCCGACAGCGCCATGGCCCAGATTCTGC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCGAATTGGCAGAATCTaGGCCATGGCGCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRIGRI*AMALSG
Trigger: CCCCGACAGCGCCATGGCCCAGATTCTGCCAATTCG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTCCTGAAAACGAATTaGCAGAATCTGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLLKTN*QNLGHG
Trigger: GCCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGAAGCCAATGTTTGCTaGGTTGATACCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSEANVC*VDTQVL
Trigger: CAGAACCTGGGTATCAACCCAGCAAACATTGGCTTC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGGTTCCCTGTAGGTGGTGTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTTCAATGATTACCACCTaGGCCTGCTCTCCTACTTTT +
Preference number: 4 (lower is better)
Translates to: WFPVGGVPTSIICNFPPASMITT*ACSPTF
Trigger: AAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGA...AGCTGGAGGGAAGTTACATATTATTGAAGTTGGCACACCACCTACAGGGAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp ATTTCCGGGCAAAGAGTTCTTCAGCACCGGCTAAGTTATTACGTACAGCCATTCACGAAGAATTCCCTTTaGTGCATTAGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: ISGQRVLQHRLSYYVQPFTKNSL*CISSHL
Trigger: AAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGT...GAATGGCTGTACGTAATAACTTAGCCGGTGCTGAAGAACTCTTTGCCCGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CCA 90 bp TCTAGCAACCAGTCCTTAGTAAGATCTGCTACAGGAAACAGAAAAGGCTCCAGTCCGACGGATAGTGTCTaGAGTACGAAGAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: SSNQSLVRSATGNRKGSSPTDSV*STKNSL
Trigger: AAGGGAATTCTTCGTACTCCAGACACTATCCGTCGG...ACTGGAGCCTTTTCTGTTTCCTGTAGCAGATCTTACTAAGGACTGGTTGCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTGACCTGGCTGGGCTaGGACACTCTGGAACCGACG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILTWLG*DTLEPT
Trigger: CGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTGACCTGGCTGGGCTaGGACACTCTGGAACCGACG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLTWLG*DTLEPT
Trigger: CGTCGGTTCCAGAGTGTCCCAGCCCAGCCAGGTCAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTGGCTGTCCATACGGTaGTGCGGTATAACCATAACC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGWLSIR*CGITIT
Trigger: GGTTATGGTTATACCGCACCACCGTATGGACAGCCA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGCCACCACACCTGGTaGGACAGGGATTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSHHTW*DRDFKF
Trigger: AAACTTAAAATCCCTGTCCCACCAGGTGTGGTGGCT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTATGGAGTCACCATGTTaGTCAGGCTTGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSMESPC*SGLSRT
Trigger: AGTTCGAGACAAGCCTGACCAACATGGTGACTCCAT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTTCCTGACGCCACATaGGGGGAAACAGAGGAACCG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLPDAT*GETEEP
Trigger: CGGTTCCTCTGTTTCCCCCCATGTGGCGTCAGGAAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAACATTTTCACTGGCTaGGACTCTCCTTCCATACTC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSNIFTG*DSPSIL
Trigger: GAGTATGGAAGGAGAGTCTCAGCCAGTGAAAATGTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp CATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGACACTTTTGTCCTTCAATGGGCTaGGACACTTTCCTATCTACA +
Preference number: 4 (lower is better)
Translates to: HLKLCKASCMSFNGLRHFCPSMG*DTFLST
Trigger: TGTAGATAGGAAAGTGTCTCAGCCCATTGAAGGACA...AAAGTGTCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR TCA 90 bp TCTAGCAACCAGTCCTTAGTAAGATCTGCTACAGGAAACAGAAAAGGCTCCAGTCCAGCTGTGGCTTCATaGGGTGCAGTAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: SSNQSLVRSATGNRKGSSPAVAS*GAVTKI
Trigger: AATTTTTGTTACTGCACCTCATGAAGCCACAGCTGG...ACTGGAGCCTTTTCTGTTTCCTGTAGCAGATCTTACTAAGGACTGGTTGCTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCCAGCTGTGGCTTCATaGGGTGCAGTAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSPAVAS*GAVTKI
Trigger: AATTTTTGTTACTGCACCTCATGAAGCCACAGCTGG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGTCCCTGATCTGGACTaGTTCGCATTACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSVPDLD*FALHFS
Trigger: TGAGAAATGTAATGCGAATCAGTCCAGATCAGGGAC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCATCTACAATCTGTGTaGTGTCAGCAAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSHLQSV*CQQEAL
Trigger: AAGAGCCTCTTGCTGACATCACACAGATTGTAGATG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTGGCTAAGGCATTGTaGGTAGCAGGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLAKAL*VAGSSQ
Trigger: CTGTGAGGAGCCTGCTACTCACAATGCCTTAGCCAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTACTTCTTCAGGGTCCTaGGTCTCAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGTSSGS*VSDKAV
Trigger: AACAGCTTTGTCTGAGACTCAGGACCCTGAAGAAGT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGAAGGTCTGCAGTCATaGAAGCCTTTACAGTTACTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSEGLQS*KPLQLL
Trigger: CAGTAACTGTAAAGGCTTTCATGACTGCAGACCTTC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGAGCATGGCAAAATCCATaGTATTGTGCCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRAWQNP*YCASMQ
Trigger: CTGCATGGAGGCACAATATCATGGATTTTGCCATGC...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGCATGGCAAAATCCATaGTATTGTGCCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGAWQNP*YCASMQ
Trigger: CTGCATGGAGGCACAATATCATGGATTTTGCCATGC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGTGGTGGGGAAAACTaGTGGCACCTCCCACAAATC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSGGEN*WHLPQI
Trigger: GATTTGTGGGAGGTGCCATCAGTTTTCCCCACCACT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTGCCTCAGATAGACTaGTGGCTCCAAATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLPQID*WLQIQR
Trigger: CCTTTGAATTTGGAGCCATCAGTCTATCTGAGGCAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGGCTCAGGTAATTTCTaGGGTTTGCCTCAGATAGAC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGGSGNF*GLPQID
Trigger: GTCTATCTGAGGCAAACCTCAGAAATTACCTGAGCC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGATTCCATCTTAAACTGTaGAAAGCTAGCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: SFHLKLCKASCMSFNGLRFHLKL*KASCMS
Trigger: GGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAA...TCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAAAGAAGACATCCACTaGCTTCTTTGGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSKEDIH*LLWKGL
Trigger: CAGCCCTTTCCAAAGAAGGCAGTGGATGTCTTCTTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGAAAGAAGACATCCACTaGCTTCTTTGGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CISFHLKLCKASCMSFNGKEDIH*LLWKGL
Trigger: CAGCCCTTTCCAAAGAAGGCAGTGGATGTCTTCTTT...CCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGCAGCCACCTTTGCTaGCTCCGAGTAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSSHLC*LRVISL
Trigger: CAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTATTAGCAGCCACCTTTaGTGCCTCCGAGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGISSHL*CLRVIS
Trigger: GGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAAT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAAGAATTCCCTTTGGTaGATTAGCAGCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSKNSLW*ISSHLC
Trigger: GCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTCTACTTCTTTGATTTaGCCAGTCTTGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSTSLI*PVLQAA
Trigger: GGCAGCTTGCAAGACTGGGCAAATCAAAGAAGTAGA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTTCCAGCAGCACGCTaGCCCACAATTCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFPAAR*PTILDP
Trigger: AGGATCCAGAATTGTGGGGCAGCGTGCTGCTGGAAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTACGGTCAGCCTTAATTaGAGTGAGGATAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSTVSLN*SEDKEV
Trigger: AACCTCCTTATCCTCACTGCAATTAAGGCTGACCGT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGACCGCAGGTTCATTaGAACGTTCAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSRPQVH*NVQQTH
Trigger: ATGAGTTTGCTGAACGTTGCAATGAACCTGCGGTCT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGCTGAAATAATTGACTaGACGAGTGTGATCCAACCG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSAEIID*TSVIQP
Trigger: CGGTTGGATCACACTCGTGCAGTCAATTATTTCAGC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGGCAACACTGGGTCCTaGTGTCAGCATCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIGNTGS*CQHQLG
Trigger: CCCCAGTTGATGCTGACAGCAGGACCCAGTGTTGCC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTGTCCATACGGTGGTaGGGTATAACCATAACCAAA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLSIRW*GITITK
Trigger: TTTGGTTATGGTTATACCGCACCACCGTATGGACAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTCCTCTTCCTTTCATaGCTCCCTAATGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSFLFLS*LPNASV
Trigger: TACTGAGGCATTAGGGAGGCATGAAAGGAAGAGGAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTGCTGTCCCTGATCTaGACTGATTCGCATTACATT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLLSLI*TDSHYI
Trigger: AATGTAATGCGAATCAGTCCAGATCAGGGACAGCAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGAGGGACGGCAACACTaGGTCCTGCTGTCAGCATCA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIEGRQH*VLLSAS
Trigger: TGATGCTGACAGCAGGACCCAGTGTTGCCGTCCCTC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTATGGACCTTAACAGATaGAAATGGGTGGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGMDLNR*KWVGPS
Trigger: ACTTGGGCCCACCCATTTCCATCTGTTAAGGTCCAT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTGTCCTTCAATGGGCTaGGACACTTTCCTATCTACA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGCPSMG*DTFLST
Trigger: TGTAGATAGGAAAGTGTCTCAGCCCATTGAAGGACA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCCTCACAGCCCTCATaGATTCTGGCCTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSSQPS*ILASSQ
Trigger: TTGGCTAGAGGCCAGAATTCATGAGGGCTGTGAGGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGAAGGTCTGCAGTCATaGAAGCCTTTACAGTTACTG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGEGLQS*KPLQLL
Trigger: CAGTAACTGTAAAGGCTTTCATGACTGCAGACCTTC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTGGGCTTTTGCAAGTTaGCTCCAGACCGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNWAFAS*LQTAGS
Trigger: TGAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTGCTTCCAACATGGTaGTCAGCTCTTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLLPTW*SALQNS
Trigger: GCTATTTTGAAGAGCTGATCACCATGTTGGAAGCAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTGACTGCACGAGTGTaGTCCAACCGTGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLTARV*SNRGDS
Trigger: GCTGTCTCCACGGTTGGATCACACTCGTGCAGTCAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTGACTGCACGAGTGTaGTCCAACCGTGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILTARV*SNRGDS
Trigger: GCTGTCTCCACGGTTGGATCACACTCGTGCAGTCAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGTCATAAGCATCTATTaGTGTTCGCAGAGCCTGATA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSVISIY*CSQSLI
Trigger: TATCAGGCTCTGCGAACATCAATAGATGCTTATGAC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTGTTTTTCCAAACGCTaGGCAAGCGAGATATTGTCA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSCFSKR*ASEILS
Trigger: TGACAATATCTCGCTTGCTCAGCGTTTGGAAAAACA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCAGTGTACGATGTGCTaGTTAGTGTTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSQCTMC*LVLSLL
Trigger: CAACAAAGACAACACTAATCAGCACATCGTACACTG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCAGTTACCCAGAATATaGGGCAGAGGGTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNQLPRI*GRGSQL
Trigger: GAGTTGGGACCCTCTGCCTCATATTCTGGGTAACTG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCATGTTCACCTTCCCTaGCCCATACTGGCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNHVHLP*PILAKG
Trigger: ACCTTTGGCCAGTATGGGTCAGGGAAGGTGAACATG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTACTGAAGCCAATGTTTaGTGGGTTGATACCCAGGTT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGTEANV*WVDTQV
Trigger: AACCTGGGTATCAACCCAGCAAACATTGGCTTCAGT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GATTCTTCTGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTATTACCACCTGGGCCTaGTCTCCTACTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: DSSAFPSILNCAKLAACPITTWA*SPTFSL
Trigger: TAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAAT...AGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCAGAAGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCACACGATTTTGCTGTaGAGATATACCAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSHTILL*RYTSQK
Trigger: CTTCTGACTGGTATATCTGCACAGCAAAATCGTGTG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTCCATCTTAAACTGTaGAAAGCTAGCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSFHLKL*KASCMS
Trigger: GGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGAATTATGTTTTCTTCTTCCACACACACTGACAGAACCTTAGGTTTCCCCACAAAGAATTCCCTTTGGTaGATTAGCAGCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: GIMFSSSTHTDRTLGFPTKNSLW*ISSHLC
Trigger: GCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTT...TGTGGGGAAACCTAAGGTTCTGTCAGTGTGTGTGGAAGAAGAAAACATAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR GCA 90 bp ACGTTAGCCCTTAGGTACACACTAAGTGCCAATGTAGGGTCCACAGATTTCACAGACTTGACCTGTTTCTaGAAAGCACTGAATGACTTT +
Preference number: 4 (lower is better)
Translates to: TLALRYTLSANVGSTDFTDLTCF*KALNDF
Trigger: AAAGTCATTCAGTGCTTTGCAGAAACAGGTCAAGTC...TGTGAAATCTGTGGACCCTACATTGGCACTTAGTGTGTACCTAAGGGCTAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAGGATAAGGAGGTTTTaGAGATTCCTGTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSRIRRF*RFLCSL
Trigger: CAGTGAACACAGGAATCTGCAAAACCTCCTTATCCT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTGCAACTGGGCTTTTaGAAGTTGACTCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLQLGF*KLTPDR
Trigger: GCGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTCGCTCAAGTCCCAGTaGTGCTTCCAACATGGTGAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSLKSQ*CFQHGD
Trigger: ATCACCATGTTGGAAGCAGCACTGGGACTTGAGCGA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCAAAAACACCAGTTCTaGCCAAAGATGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSQKHQF*PKMSLF
Trigger: GAACAAGCTCATCTTTGGGCAGAACTGGTGTTTTTG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAAAGGCTGTCTTTCTTaGACAGCTCTACACTCTGTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSKGCLS*TALHSV
Trigger: AACAGAGTGTAGAGCTGTGCAAGAAAGACAGCCTTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTACCATAACCAAAAGGTaGCTGGGGAGGGACGGCAAC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKITITKR*LGRDGN
Trigger: GTTGCCGTCCCTCCCCAGGCACCTTTTGGTTATGGT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGCGCTTCATCTCACATaGTGTACCCAAAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNALHLT*CTQSQA
Trigger: AGCCTGGCTTTGGGTACAGCATGTGAGATGAAGCGC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGCTCACTACAACCTTTaGCTCACAGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGAHYNL*LTGSSD
Trigger: ATCACTTGAACCTGTGAGGCAAAGGTTGTAGTGAGC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTCTGTGTTGATATTTaGACTGAGGGTGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLCVDI*TEGAKA
Trigger: TGCTTTTGCACCCTCAGTGCAAATATCAACACAGAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCCTGCAAGGCTAGAATaGCGATCAAACATTTTCACT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSPARLE*RSNIFT
Trigger: AGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GATTCTTCTGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTCTGCATGTCCTTCAATaGGCTGAGACACTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: DSSAFPSILNCAKLAACPLHVLQ*AETLSY
Trigger: ATAGGAAAGTGTCTCAGCCCATTGAAGGACATGCAG...AGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCAGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp GATTCTTCTGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTCTGGTTCCCTGTAGGTaGTGTGCCAACTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: DSSAFPSILNCAKLAACPLVPCR*CANFNN
Trigger: ATTATTGAAGTTGGCACACCACCTACAGGGAACCAG...AGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCAGAAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTGGGCTGGGACACTCTaGAACCGACGGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIWAGTL*NRRIVS
Trigger: AGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTGGGCTGGGACACTCTaGAACCGACGGATAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSWAGTL*NRRIVS
Trigger: AGACACTATCCGTCGGTTCCAGAGTGTCCCAGCCCA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAGGAGAAGTTTGACCTaGCTGGGCTGGGACACTCTG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSRRSLT*LGWDTL
Trigger: CAGAGTGTCCCAGCCCAGCCAGGTCAAACTTCTCCT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGCTGCCCCACAATTCTaGATCCTTTCGACGTACCAG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNAAPQF*ILSTYQ
Trigger: CTGGTACGTCGAAAGGATCCAGAATTGTGGGGCAGC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTGTTTTCGCCCTTGCTaGAGTACAGGCCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNCFRPC*STGLQS
Trigger: GCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAGAGGCTCTTCATCTTaGACTAACATTTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGRGSSS*TNIWAN
Trigger: GTTTGCCCAAATGTTAGTTCAAGATGAAGAGCCTCT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTCCTCACAGCCCTCATaGATTCTGGCCTCTAGCCAA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSSQPS*ILASSQ
Trigger: TTGGCTAGAGGCCAGAATTCATGAGGGCTGTGAGGA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTGGCTAAGGCATTGTaGGTAGCAGGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLAKAL*VAGSSQ
Trigger: CTGTGAGGAGCCTGCTACTCACAATGCCTTAGCCAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTGGCTAAGGCATTGTaGGTAGCAGGCTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILAKAL*VAGSSQ
Trigger: CTGTGAGGAGCCTGCTACTCACAATGCCTTAGCCAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGCCTTTACAGTTACTaGCACTTCTTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSLYSY*HFFRVL
Trigger: CAGGACCCTGAAGAAGTGTCAGTAACTGTAAAGGCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGATTCCTGTGTTCACTaGATACAGAGTTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSDSCVH*IQSYQG
Trigger: TCCTTGATAACTCTGTATTCAGTGAACACAGGAATC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTGGGCTTTTGCAAGTTaGCTCCAGACCGCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSWAFAS*LQTAGS
Trigger: TGAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGTTCTGCCCAAAGATaGGCTTGTTCTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSSAQR*ACSAAL
Trigger: AAGAGCTGCAGAACAAGCTCATCTTTGGGCAGAACT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTGTTGTTATGGTTCTaGACTGAACGCAAATACGGT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLLLWF*TERKYG
Trigger: ACCGTATTTGCGTTCAGTTCAGAACCATAACAACAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGGCACCTGTTACATATaGAGTGAGCAAAACATACTA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSGTCYI*SEQNIL
Trigger: TAGTATGTTTTGCTCACTTCATATGTAACAGGTGCC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGAAGCCACTGAAACTTaGGTAACCTTATGGACCTTA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGEATET*VTLWTL
Trigger: TAAGGTCCATAAGGTTACTCAAGTTTCAGTGGCTTC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGAATTATGTTTTCTTCTTCCACACACACTGACAGAACCTTAGGTTTCCCCACAGGTTTCCCCACATACTaGATCCACAGTTTTATCGTT +
Preference number: 4 (lower is better)
Translates to: GIMFSSSTHTDRTLGFPTGFPTY*IHSFIV
Trigger: AACGATAAAACTGTGGATTCAGTATGTGGGGAAACC...TGTGGGGAAACCTAAGGTTCTGTCAGTGTGTGTGGAAGAAGAAAACATAATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTTCCCAGCTTTCAGTaGAATTACTTTGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGFPSFQ*NYFASW
Trigger: CCAGCTAGCAAAGTAATTGCACTGAAAGCTGGGAAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269122.8
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTACTCCAGTGATAAACTaGATTATCCGTAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSTPVIN*IIRNKS
Trigger: GCTCTTGTTACGGATAATGCAGTTTATCACTGGAGT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGATAATCTGGCACCCTaGAAGGCTAGAATGGCGATC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNDNLAP*KARMAI
Trigger: GATCGCCATTCTAGCCTTGCAGGGTGCCAGATTATC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTGTGCAAAGCTAGCTaGATGTCCTTCAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLCKAS*MSFNGL
Trigger: CAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTCCATCTTAAACTGTaGAAAGCTAGCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGFHLKL*KASCMS
Trigger: GGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAGCAGCCACCTTTGCTaGCTCCGAGTAATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSSHLC*LRVISL
Trigger: CAGGGAAATTACTCGGAGGCAGCAAAGGTGGCTGCT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCAGGATCGTAGCAGTTaGTTTCTCTACAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSQDRSS*FLYRFF
Trigger: AAAGAATCTGTAGAGAAAGCAACTGCTACGATCCTG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTTCCAGCAGCACGCTaGCCCACAATTCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIFPAAR*PTILDP
Trigger: AGGATCCAGAATTGTGGGGCAGCGTGCTGCTGGAAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTTCCAGCAGCACGCTaGCCCACAATTCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHFPAAR*PTILDP
Trigger: AGGATCCAGAATTGTGGGGCAGCGTGCTGCTGGAAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGTCTCCTGTAAGGATTaGTTTCCAGCAGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHVSCKD*FPAARC
Trigger: GCAGCGTGCTGCTGGAAAGCAATCCTTACAGGAGAC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCTGCAACTGGGCTTTTaGAAGTTGACTCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLQLGF*KLTPDR
Trigger: GCGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGTTTGTTTTAGCCAGTaGGAATATCAGTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSVCFSQ*EYQFCL
Trigger: GAGACAGAACTGATATTCGCACTGGCTAAAACAAAC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGCCCCATCAACAGCTaGCTGATATTCACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISPINS*LIFTQV
Trigger: CACCTGGGTGAATATCAGGCAGCTGTTGATGGGGCT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGCCCCATCAACAGCTaGCTGATATTCACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSPINS*LIFTQV
Trigger: CACCTGGGTGAATATCAGGCAGCTGTTGATGGGGCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTCAAGTCCCAGTGCTaGTTCCAACATGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLKSQC*FQHGDQ
Trigger: CTGATCACCATGTTGGAAGCAGCACTGGGACTTGAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCGCTCAAGTCCCAGTaGTGCTTCCAACATGGTGAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSLKSQ*CFQHGD
Trigger: ATCACCATGTTGGAAGCAGCACTGGGACTTGAGCGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAAAAACACCAGTTCTaGCCAAAGATGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQKHQF*PKMSLF
Trigger: GAACAAGCTCATCTTTGGGCAGAACTGGTGTTTTTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGAAAAGGCTGTCTTTCTTaGACAGCTCTACACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRKGCLS*TALHSV
Trigger: AACAGAGTGTAGAGCTGTGCAAGAAAGACAGCCTTT...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAGAAGCATACTGCATTaGATCCTTGTAAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGRSILH*ILVKAV
Trigger: GACAGCCTTTACAAGGATGCAATGCAGTATGCTTCT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGAAGAAGCATACTGCATTaGATCCTTGTAAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRRSILH*ILVKAV
Trigger: GACAGCCTTTACAAGGATGCAATGCAGTATGCTTCT...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAAATCCATGATATTGTaGCTCCATGCAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSKSMIL*LHAVSR
Trigger: CCTAGAAACTGCATGGAGGCACAATATCATGGATTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTCTTGCATGGTCATATaGCAGTGTTTTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSCMVI*QCFCFS
Trigger: GCTAAAGCAAAAACACTGGCATATGACCATGCAAGA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGCTGCCCCACAATTCTaGATCCTTTCGACGTACCAG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHAAPQF*ILSTYQ
Trigger: CTGGTACGTCGAAAGGATCCAGAATTGTGGGGCAGC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAGTGTGATCCAACCGTaGAGACAGCACCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSVIQP*RQHHQQ
Trigger: TTGCTGATGGTGCTGTCTCCACGGTTGGATCACACT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTGGCTGTCCATACGGTaGTGCGGTATAACCATAACC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNWLSIR*CGITIT
Trigger: GGTTATGGTTATACCGCACCACCGTATGGACAGCCA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTACTGACAGTCTTGCATaGTCATATGCCAGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSTDSLA*SYASVF
Trigger: AAAAACACTGGCATATGACCATGCAAGACTGTCAGT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGCCACCACACCTGGTaGGACAGGGATTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSHHTW*DRDFKF
Trigger: AAACTTAAAATCCCTGTCCCACCAGGTGTGGTGGCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGTGCAAAAGCAGTGGTaGGGAAAACTGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNVQKQW*GKLMAP
Trigger: AGGTGCCATCAGTTTTCCCCACCACTGCTTTTGCAC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTTAACAGATGGAAATaGGTGGGCCCAAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLNRWK*VGPSKN
Trigger: ATTCTTACTTGGGCCCACCCATTTCCATCTGTTAAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTATGGACCTTAACAGATaGAAATGGGTGGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSMDLNR*KWVGPS
Trigger: ACTTGGGCCCACCCATTTCCATCTGTTAAGGTCCAT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTCCCTGACCCATACTaGCCAAAGGTTAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFPDPY*PKVNQQ
Trigger: CTGCTGATTAACCTTTGGCCAGTATGGGTCAGGGAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAGCTGGAGATGCTCCTaGAAACGAATTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSWRCS*KRIGRI
Trigger: GATTCTGCCAATTCGTTTTCAGGAGCATCTCCAGCT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGATGGCGCTGTCTGCTaGAATTGGTCTTCGAATTGG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSDGAVC*NWSSNW
Trigger: CCAATTCGAAGACCAATTTCAGCAGACAGCGCCATC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGATGGCGCTGTCTGCTaGAATTGGTCTTCGAATTGG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIDGAVC*NWSSNW
Trigger: CCAATTCGAAGACCAATTTCAGCAGACAGCGCCATC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAACATTTTCACTGGCTaGGACTCTCCTTCCATACTC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSNIFTG*DSPSIL
Trigger: GAGTATGGAAGGAGAGTCTCAGCCAGTGAAAATGTT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCCAGCTGTGGCTTCATaGGGTGCAGTAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSPAVAS*GAVTKI
Trigger: AATTTTTGTTACTGCACCTCATGAAGCCACAGCTGG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGGATTCGTATTTGTTaGGCTGTCCCTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSRIRIC*AVPGPK
Trigger: TTTTGGACCAGGGACAGCTCAACAAATACGAATCCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTGTTTTCGCCCTTGCTaGAGTACAGGCCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKICFRPC*STGLQS
Trigger: GCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTGTTTTCGCCCTTGCTaGAGTACAGGCCTACAAAGC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHCFRPC*STGLQS
Trigger: GCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATATAGCATCTGCAACTTaGGGCGCATGCATAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNIASAT*GACIRF
Trigger: GAACCTTATGCATGCGCCTCAAGTTGCAGATGCTAT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCCCGGTCATAATGTGTaGACATCTGATTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSPGHNV*TSDCLE
Trigger: TTCTAGGCAATCAGATGTTCACACATTATGACCGGG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTAAGAAGATGGGTGTaGACCACTGCACGTTTTATA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLRRWV*TTARFI
Trigger: TATAAAACGTGCAGTGGTTCACACCCATCTTCTTAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGTAAACATTCCCATGTaGGCTCGCTCAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIVNIPM*ARSSPS
Trigger: ACTGGGACTTGAGCGAGCTCACATGGGAATGTTTAC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGTAAACATTCCCATGTaGGCTCGCTCAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHVNIPM*ARSSPS
Trigger: ACTGGGACTTGAGCGAGCTCACATGGGAATGTTTAC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTGTCTTTGTTGGCACTaGCAGTCTTGCATGGTCATA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSCLCWH*QSCMVI
Trigger: TATGACCATGCAAGACTGTCAGTGCCAACAAAGACA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTTCTGTACACTCAGTaGTCTAAAACACCACAATAT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLLYTQ*SKTPQY
Trigger: ATATTGTGGTGTTTTAGATCACTGAGTGTACAGAAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGGTATGTGTAGCTATTaGGGATTAAGGGATAGTGAA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGGMCSY*GLRDSE
Trigger: TTCACTATCCCTTAATCCTCAATAGCTACACATACC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTTCGCACAGGCATATaGCAGCACAGGAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLRTGI*QHRRKI
Trigger: AATTTTTCTCCTGTGCTGTCATATGCCTGTGCGAAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTATTACCACCTGGGCCTaGTCTCCTACTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSITTWA*SPTFSL
Trigger: TAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAAT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTACTCCAGTGATAAACTaGATTATCCGTAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGTPVIN*IIRNKS
Trigger: GCTCTTGTTACGGATAATGCAGTTTATCACTGGAGT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGATAATCTGGCACCCTaGAAGGCTAGAATGGCGATC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHDNLAP*KARMAI
Trigger: GATCGCCATTCTAGCCTTGCAGGGTGCCAGATTATC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGATAATCTGGCACCCTaGAAGGCTAGAATGGCGATC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIDNLAP*KARMAI
Trigger: GATCGCCATTCTAGCCTTGCAGGGTGCCAGATTATC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTGTGCAAAGCTAGCTaGATGTCCTTCAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLCKAS*MSFNGL
Trigger: CAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTCTATTCATGTAGATaGAGGTACCAGTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSFYSCR*RYQSQD
Trigger: ATCTTGAGACTGGTACCTGCATCTACATGAATAGAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTCAAGTCCCAGTGCTaGTTCCAACATGGTGATCAG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLKSQC*FQHGDQ
Trigger: CTGATCACCATGTTGGAAGCAGCACTGGGACTTGAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTCGCTCAAGTCCCAGTaGTGCTTCCAACATGGTGAT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSLKSQ*CFQHGD
Trigger: ATCACCATGTTGGAAGCAGCACTGGGACTTGAGCGA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTATGATATCTTTGAATTaGCCTTCTTTCCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSMISLN*PSFQAS
Trigger: TGATGCCTGGAAAGAAGGGCAATTCAAAGATATCAT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGAAAATCCATGATATTGTaGCTCCATGCAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRKSMIL*LHAVSR
Trigger: CCTAGAAACTGCATGGAGGCACAATATCATGGATTT...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTAGCATTTTCTATATaGATAATGGGGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLAFSI*IMGKPA
Trigger: TGCAGGTTTCCCCATTATGCATATAGAAAATGCTAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTCCTCTTCCTTTCATaGCTCCCTAATGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFLFLS*LPNASV
Trigger: TACTGAGGCATTAGGGAGGCATGAAAGGAAGAGGAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCTCCTGAAAACGAATTaGCAGAATCTGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLLKTN*QNLGHG
Trigger: GCCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTCCTGAAAACGAATTaGCAGAATCTGGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILLKTN*QNLGHG
Trigger: GCCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGAAGCCAATGTTTGCTaGGTTGATACCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNEANVC*VDTQVL
Trigger: CAGAACCTGGGTATCAACCCAGCAAACATTGGCTTC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTGAGAAATTGGTCTTCGAATTaGATTACTTGGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: SFHLKLCKASCMSFNGLRNWSSN*ITWVIH
Trigger: ATGAATGACCCAAGTAATCCAATTCGAAGACCAATT...TCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTGCATGTCCTTCAATaGGCTGAGACACTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLHVLQ*AETLSY
Trigger: ATAGGAAAGTGTCTCAGCCCATTGAAGGACATGCAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTGGTTCCCTGTAGGTaGTGTGCCAACTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLVPCR*CANFNN
Trigger: ATTATTGAAGTTGGCACACCACCTACAGGGAACCAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTACGAAGAATTCCCTTTaGTGCATTAGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSTKNSL*CISSHL
Trigger: AAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCCGACGGATAGTGTCTaGAGTACGAAGAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNPTDSV*STKNSL
Trigger: AAGGGAATTCTTCGTACTCCAGACACTATCCGTCGG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTTAAAGTGCACATCTaGGTCCTGGCTAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGFKVHI*VLAKVN
Trigger: GTTAACTTTAGCCAGGACCCAGATGTGCACTTTAAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGCTGTTTGTACAACCTaGTCAATTAGGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNAVCTT*SIRGLL
Trigger: CAGGAGACCCCTAATTGACCAGGTTGTACAAACAGC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTTCCAGGCATCAGTTaGATGATTCATCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSFPGIS*MIHHGN
Trigger: ATTACCATGATGAATCATCCAACTGATGCCTGGAAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAGTGTGATCCAACCGTaGAGACAGCACCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSVIQP*RQHHQQ
Trigger: TTGCTGATGGTGCTGTCTCCACGGTTGGATCACACT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCATTTTTCAATAATCTaGGAAGCACTGCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSHFSII*EALQSS
Trigger: ACTGGATTGCAGTGCTTCCCAGATTATTGAAAAATG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAAACACACACAAGATTaGAATCATGGTGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGKHTQD*NHGALC
Trigger: GCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGCCATAAGCAAGAGCTaGATTCACACAACCAATTTT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGAISKS*IHTTNF
Trigger: AAAATTGGTTGTGTGAATCCAGCTCTTGCTTATGGC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTATGAGCCACCACACCTaGTGGGACAGGGATTTTAAG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIMSHHT*WDRDFK
Trigger: CTTAAAATCCCTGTCCCACCAGGTGTGGTGGCTCAT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGTGCAAAAGCAGTGGTaGGGAAAACTGATGGCACCT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIVQKQW*GKLMAP
Trigger: AGGTGCCATCAGTTTTCCCCACCACTGCTTTTGCAC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGCTGGAGATGCTCCTaGAAACGAATTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSWRCS*KRIGRI
Trigger: GATTCTGCCAATTCGTTTTCAGGAGCATCTCCAGCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGCTGGAGATGCTCCTaGAAACGAATTGGCAGAATC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISWRCS*KRIGRI
Trigger: GATTCTGCCAATTCGTTTTCAGGAGCATCTCCAGCT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTCATCAGTCATGGTATaGGCCTTCATTTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSSVMV*AFILLF
Trigger: GAAAAGTAAAATGAAGGCTCATACCATGACTGATGA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTGTCCTTCAATGGGCTaGGACACTTTCCTATCTACA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNCPSMG*DTFLST
Trigger: TGTAGATAGGAAAGTGTCTCAGCCCATTGAAGGACA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCATCATGCTTTTCACTaGTCTGCATTGCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSHHAFH*SALQQE
Trigger: TTCCTGTTGCAATGCAGATCAGTGAAAAGCATGATG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTCTTCCACACACACTaGCAGAACTTGTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNFFHTH*QNLSLS
Trigger: AGAAAGGGACAAGTTCTGTCAGTGTGTGTGGAAGAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGTCCCTGATCTGGACTaGTTCGCATTACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNVPDLD*FALHFS
Trigger: TGAGAAATGTAATGCGAATCAGTCCAGATCAGGGAC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGAGGCTCTTCATCTTaGACTAACATTTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSRGSSS*TNIWAN
Trigger: GTTTGCCCAAATGTTAGTTCAAGATGAAGAGCCTCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCATCTACAATCTGTGTaGTGTCAGCAAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNHLQSV*CQQEAL
Trigger: AAGAGCCTCTTGCTGACATCACACAGATTGTAGATG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTATAGCATCTGCAACTTaGGGCGCATGCATAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSIASAT*GACIRF
Trigger: GAACCTTATGCATGCGCCTCAAGTTGCAGATGCTAT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTATAGCATCTGCAACTTaGGGCGCATGCATAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIIASAT*GACIRF
Trigger: GAACCTTATGCATGCGCCTCAAGTTGCAGATGCTAT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACACTTCTTCAGGGTCCTaGGTCTCAGACAAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHTSSGS*VSDKAV
Trigger: AACAGCTTTGTCTGAGACTCAGGACCCTGAAGAAGT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGCCTTTACAGTTACTaGCACTTCTTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSLYSY*HFFRVL
Trigger: CAGGACCCTGAAGAAGTGTCAGTAACTGTAAAGGCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCAAACAGCTCATTGCTaGTGGCGATATTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSQTAHC*WRYWQY
Trigger: ATATTGCCAATATCGCCATCAGCAATGAGCTGTTTG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGAACTGCTGAAGTATTaGCATCAAATTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGELLKY*HQISGK
Trigger: TTTTCCGGAAATTTGATGTCAATACTTCAGCAGTTC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTGCTTCCAACATGGTaGTCAGCTCTTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLLPTW*SALQNS
Trigger: GCTATTTTGAAGAGCTGATCACCATGTTGGAAGCAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAGTTCTGCCCAAAGATaGGCTTGTTCTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSSAQR*ACSAAL
Trigger: AAGAGCTGCAGAACAAGCTCATCTTTGGGCAGAACT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGTTCTGCCCAAAGATaGGCTTGTTCTGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISSAQR*ACSAAL
Trigger: AAGAGCTGCAGAACAAGCTCATCTTTGGGCAGAACT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGTTATGGTTCTGAACTaGACGCAAATACGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSVMVLN*TQIRFH
Trigger: GTGAAACCGTATTTGCGTTCAGTTCAGAACCATAAC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGCATGGCAAAATCCATaGTATTGTGCCTCCATGCAG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSAWQNP*YCASMQ
Trigger: CTGCATGGAGGCACAATATCATGGATTTTGCCATGC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTCCCCCATTATAAACTaGGAAGTGGGTAAAGACGAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSPIIN*EVGKDD
Trigger: ATCGTCTTTACCCACTTCTCAGTTTATAATGGGGGA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCAGTGTACGATGTGCTaGTTAGTGTTGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSQCTMC*LVLSLL
Trigger: CAACAAAGACAACACTAATCAGCACATCGTACACTG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTGCCTCAGATAGACTaGTGGCTCCAAATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLPQID*WLQIQR
Trigger: CCTTTGAATTTGGAGCCATCAGTCTATCTGAGGCAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGGCTCAGGTAATTTCTaGGGTTTGCCTCAGATAGAC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIGSGNF*GLPQID
Trigger: GTCTATCTGAGGCAAACCTCAGAAATTACCTGAGCC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGAAGCCACTGAAACTTaGGTAACCTTATGGACCTTA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSEATET*VTLWTL
Trigger: TAAGGTCCATAAGGTTACTCAAGTTTCAGTGGCTTC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATATTACCACCTGGGCCTaGTCTCCTACTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNITTWA*SPTFSL
Trigger: TAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAAT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCACACGATTTTGCTGTaGAGATATACCAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSHTILL*RYTSQK
Trigger: CTTCTGACTGGTATATCTGCACAGCAAAATCGTGTG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAAGAACACCACATCATaGTTTTCACTGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGKNTTS*FSLICI
Trigger: AATGCAGATCAGTGAAAAGCATGATGTGGTGTTCTT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTGTGGCTTCATGAGGTaGAGTAACAAAAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGCGFMR*SNKNCF
Trigger: GAAACAATTTTTGTTACTGCACCTCATGAAGCCACA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTATTAGCAGCCACCTTTaGTGCCTCCGAGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIISSHL*CLRVIS
Trigger: GGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAAT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTATTAGCAGCCACCTTTaGTGCCTCCGAGTAATTTCC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSISSHL*CLRVIS
Trigger: GGAAATTACTCGGAGGCAGCAAAGGTGGCTGCTAAT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCTACTTCTTTGATTTaGCCAGTCTTGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSTSLI*PVLQAA
Trigger: GGCAGCTTGCAAGACTGGGCAAATCAAAGAAGTAGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGGATAAGGAGGTTTTaGAGATTCCTGTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSRIRRF*RFLCSL
Trigger: CAGTGAACACAGGAATCTGCAAAACCTCCTTATCCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTCACCATTCCTTTCTaGAACTGGGCTTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFTIPF*NWAFAS
Trigger: ACTTGCAAAAGCCCAGTTGCAGAAAGGAATGGTGAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTATGATATCTTTGAATTaGCCTTCTTTCCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGMISLN*PSFQAS
Trigger: TGATGCCTGGAAAGAAGGGCAATTCAAAGATATCAT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAGAAGCATACTGCATTaGATCCTTGTAAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSRSILH*ILVKAV
Trigger: GACAGCCTTTACAAGGATGCAATGCAGTATGCTTCT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTATTCTTCACTGACCTaGACTCACATTAAACACTTT +
Preference number: 4 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSYSSLT*THIKHF
Trigger: AAAGTGTTTAATGTGAGTGCAGGTCAGTGAAGAATA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAGTGATGCAACAAAATaGAACGTTAAGACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSDATK*NVKTEL
Trigger: CAACTCAGTCTTAACGTTGCATTTTGTTGCATCACT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGAAGCCAATGTTTGCTaGGTTGATACCCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSEANVC*VDTQVL
Trigger: CAGAACCTGGGTATCAACCCAGCAAACATTGGCTTC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCAATGATTACCACCTaGGCCTGCTCTCCTACTTTT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSMITT*ACSPTF
Trigger: AAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTGGTTCCCTGTAGGTaGTGTGCCAACTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLVPCR*CANFNN
Trigger: ATTATTGAAGTTGGCACACCACCTACAGGGAACCAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATACGAAGAATTCCCTTTaGTGCATTAGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNTKNSL*CISSHL
Trigger: AAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCCGACGGATAGTGTCTaGAGTACGAAGAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHPTDSV*STKNSL
Trigger: AAGGGAATTCTTCGTACTCCAGACACTATCCGTCGG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTGCTGTCCCTGATCTaGACTGATTCGCATTACATT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLLSLI*TDSHYI
Trigger: AATGTAATGCGAATCAGTCCAGATCAGGGACAGCAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGCTGTTTGTACAACCTaGTCAATTAGGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSAVCTT*SIRGLL
Trigger: CAGGAGACCCCTAATTGACCAGGTTGTACAAACAGC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCTGTTTGTACAACCTaGTCAATTAGGGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAVCTT*SIRGLL
Trigger: CAGGAGACCCCTAATTGACCAGGTTGTACAAACAGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTATGGAGTCACCATGTTaGTCAGGCTTGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIMESPC*SGLSRT
Trigger: AGTTCGAGACAAGCCTGACCAACATGGTGACTCCAT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTTAACAGATGGAAATaGGTGGGCCCAAGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLNRWK*VGPSKN
Trigger: ATTCTTACTTGGGCCCACCCATTTCCATCTGTTAAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAACATTTTCACTGGCTaGGACTCTCCTTCCATACTC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSNIFTG*DSPSIL
Trigger: GAGTATGGAAGGAGAGTCTCAGCCAGTGAAAATGTT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTGTCCTTCAATGGGCTaGGACACTTTCCTATCTACA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHCPSMG*DTFLST
Trigger: TGTAGATAGGAAAGTGTCTCAGCCCATTGAAGGACA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCCAGCTGTGGCTTCATaGGGTGCAGTAACAAAAATT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHPAVAS*GAVTKI
Trigger: AATTTTTGTTACTGCACCTCATGAAGCCACAGCTGG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTCTTCCACACACACTaGCAGAACTTGTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSFFHTH*QNLSLS
Trigger: AGAAAGGGACAAGTTCTGTCAGTGTGTGTGGAAGAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGGATTCGTATTTGTTaGGCTGTCCCTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRIRIC*AVPGPK
Trigger: TTTTGGACCAGGGACAGCTCAACAAATACGAATCCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGGATTCGTATTTGTTaGGCTGTCCCTGGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIRIRIC*AVPGPK
Trigger: TTTTGGACCAGGGACAGCTCAACAAATACGAATCCT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGTCCCTGATCTGGACTaGTTCGCATTACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSVPDLD*FALHFS
Trigger: TGAGAAATGTAATGCGAATCAGTCCAGATCAGGGAC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCATCTACAATCTGTGTaGTGTCAGCAAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHHLQSV*CQQEAL
Trigger: AAGAGCCTCTTGCTGACATCACACAGATTGTAGATG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCCCGGTCATAATGTGTaGACATCTGATTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIPGHNV*TSDCLE
Trigger: TTCTAGGCAATCAGATGTTCACACATTATGACCGGG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCCCGGTCATAATGTGTaGACATCTGATTGCCTAGAA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHPGHNV*TSDCLE
Trigger: TTCTAGGCAATCAGATGTTCACACATTATGACCGGG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTAAGAAGATGGGTGTaGACCACTGCACGTTTTATA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLRRWV*TTARFI
Trigger: TATAAAACGTGCAGTGGTTCACACCCATCTTCTTAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTATTTAGAAGCCACCTaGACACAAATCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSYLEAT*TQICRF
Trigger: GAATCTGCAGATTTGTGTTCAGGTGGCTTCTAAATA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGAAGGTCTGCAGTCATaGAAGCCTTTACAGTTACTG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHEGLQS*KPLQLL
Trigger: CAGTAACTGTAAAGGCTTTCATGACTGCAGACCTTC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCAAACAGCTCATTGCTaGTGGCGATATTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNQTAHC*WRYWQY
Trigger: ATATTGCCAATATCGCCATCAGCAATGAGCTGTTTG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTGCTCAATTAAGACCTaGACTGCTGAAGTATTGACA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSCSIKT*TAEVLT
Trigger: TGTCAATACTTCAGCAGTTCAGGTCTTAATTGAGCA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTGCTTCCAACATGGTaGTCAGCTCTTCAAAATAGC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLLPTW*SALQNS
Trigger: GCTATTTTGAAGAGCTGATCACCATGTTGGAAGCAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGTTATGGTTCTGAACTaGACGCAAATACGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNVMVLN*TQIRFH
Trigger: GTGAAACCGTATTTGCGTTCAGTTCAGAACCATAAC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTGTTGTTATGGTTCTaGACTGAACGCAAATACGGT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLLLWF*TERKYG
Trigger: ACCGTATTTGCGTTCAGTTCAGAACCATAACAACAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGTCATAAGCATCTATTaGTGTTCGCAGAGCCTGATA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNVISIY*CSQSLI
Trigger: TATCAGGCTCTGCGAACATCAATAGATGCTTATGAC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTTCGCACAGGCATATaGCAGCACAGGAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILRTGI*QHRRKI
Trigger: AATTTTTCTCCTGTGCTGTCATATGCCTGTGCGAAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTATTACCACCTGGGCCTaGTCTCCTACTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSITTWA*SPTFSL
Trigger: TAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAAT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAAAGAAGACATCCACTaGCTTCTTTGGAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSKEDIH*LLWKGL
Trigger: CAGCCCTTTCCAAAGAAGGCAGTGGATGTCTTCTTT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAAGAATTCCCTTTGGTaGATTAGCAGCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSKNSLW*ISSHLC
Trigger: GCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAAGAATTCCCTTTGGTaGATTAGCAGCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIKNSLW*ISSHLC
Trigger: GCAAAGGTGGCTGCTAATGCACCAAAGGGAATTCTT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGACTTGACCTGTTTCTaGAAAGCACTGAATGACTTT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSDLTCF*KALNDF
Trigger: AAAGTCATTCAGTGCTTTGCAGAAACAGGTCAAGTC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTCTACTTCTTTGATTTaGCCAGTCTTGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSTSLI*PVLQAA
Trigger: GGCAGCTTGCAAGACTGGGCAAATCAAAGAAGTAGA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACACGGTCAGCCTTAATTaGAGTGAGGATAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHTVSLN*SEDKEV
Trigger: AACCTCCTTATCCTCACTGCAATTAAGGCTGACCGT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGACCGCAGGTTCATTaGAACGTTCAGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRPQVH*NVQQTH
Trigger: ATGAGTTTGCTGAACGTTGCAATGAACCTGCGGTCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTCACCATTCCTTTCTaGAACTGGGCTTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNFTIPF*NWAFAS
Trigger: ACTTGCAAAAGCCCAGTTGCAGAAAGGAATGGTGAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGTTTGTTTTAGCCAGTaGGAATATCAGTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSVCFSQ*EYQFCL
Trigger: GAGACAGAACTGATATTCGCACTGGCTAAAACAAAC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGCTGAAATAATTGACTaGACGAGTGTGATCCAACCG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHAEIID*TSVIQP
Trigger: CGGTTGGATCACACTCGTGCAGTCAATTATTTCAGC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAAAGGCTGTCTTTCTTaGACAGCTCTACACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNKGCLS*TALHSV
Trigger: AACAGAGTGTAGAGCTGTGCAAGAAAGACAGCCTTT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAAATCCATGATATTGTaGCTCCATGCAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSKSMIL*LHAVSR
Trigger: CCTAGAAACTGCATGGAGGCACAATATCATGGATTT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTGTCCATACGGTGGTaGGGTATAACCATAACCAAA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILSIRW*GITITK
Trigger: TTTGGTTATGGTTATACCGCACCACCGTATGGACAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCTCTCTATGGTTAACTaGAATATAAGCAGCGTTATA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLSMVN*NISSVI
Trigger: TATAACGCTGCTTATATTGCAGTTAACCATAGAGAG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGACACCTTTTCCTTTATTaGATCAACCTTTGTCAAGTA +
Preference number: 4 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRHLFLY*INLCQV
Trigger: TACTTGACAAAGGTTGATGCAATAAAGGAAAAGGTG...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTCAATGATTACCACCTaGGCCTGCTCTCCTACTTTT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISMITT*ACSPTF
Trigger: AAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTCAATGATTACCACCTaGGCCTGCTCTCCTACTTTT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSMITT*ACSPTF
Trigger: AAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCTGCATGTCCTTCAATaGGCTGAGACACTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLHVLQ*AETLSY
Trigger: ATAGGAAAGTGTCTCAGCCCATTGAAGGACATGCAG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCTGGTTCCCTGTAGGTaGTGTGCCAACTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLVPCR*CANFNN
Trigger: ATTATTGAAGTTGGCACACCACCTACAGGGAACCAG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTGGATATAACCATACTTaGTTATCAAGAACACCACAT +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGGYNHT*LSRTPH
Trigger: ATGTGGTGTTCTTGATAACCAAGTATGGTTATATCC...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACACGAAGAATTCCCTTTaGTGCATTAGCAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHTKNSL*CISSHL
Trigger: AAGGTGGCTGCTAATGCACCAAAGGGAATTCTTCGT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTGTTGAGCTGTCCCTaGTCCAAAAGGATACCAAAG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILLSCP*SKRIPK
Trigger: CTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTGTTGAGCTGTCCCTaGTCCAAAAGGATACCAAAG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLLSCP*SKRIPK
Trigger: CTTTGGTATCCTTTTGGACCAGGGACAGCTCAACAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTGCTGTCCCTGATCTaGACTGATTCGCATTACATT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLLSLI*TDSHYI
Trigger: AATGTAATGCGAATCAGTCCAGATCAGGGACAGCAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTTAAAGTGCACATCTaGGTCCTGGCTAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFKVHI*VLAKVN
Trigger: GTTAACTTTAGCCAGGACCCAGATGTGCACTTTAAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTACAGGAAGTCGACTTaGATTCACCTTCTGTACATA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSYRKST*IHLLYI
Trigger: TATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAAATTTCCGGAAAATaGCAAATGCTTCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQISGK*QMLLQT
Trigger: TGTTTGAAGAAGCATTTGCCATTTTCCGGAAATTTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAAACACACACAAGATTaGAATCATGGTGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSKHTQD*NHGALC
Trigger: GCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTACAGATGGAAATGGGTaGGCCCAAGTAAGAATTTAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSTDGNG*AQVRIY
Trigger: ATAAATTCTTACTTGGGCCCACCCATTTCCATCTGT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCATCATGCTTTTCACTaGTCTGCATTGCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSHHAFH*SALQQE
Trigger: TTCCTGTTGCAATGCAGATCAGTGAAAAGCATGATG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGAGGCTCTTCATCTTaGACTAACATTTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRGSSS*TNIWAN
Trigger: GTTTGCCCAAATGTTAGTTCAAGATGAAGAGCCTCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTCATCAGTAGAGAATTaGCCTCTTACAACAAGAATC +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSSVEN*PLTTRI
Trigger: GATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGATTCCTGTGTTCACTaGATACAGAGTTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNDSCVH*IQSYQG
Trigger: TCCTTGATAACTCTGTATTCAGTGAACACAGGAATC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCAAACAGCTCATTGCTaGTGGCGATATTGGCAATAT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSQTAHC*WRYWQY
Trigger: ATATTGCCAATATCGCCATCAGCAATGAGCTGTTTG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCCAACTTGTTGGATATaGGCATTATTTGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNPTCWI*ALFGPL
Trigger: CAATGGACCAAATAATGCTCATATCCAACAAGTTGG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGTTATGGTTCTGAACTaGACGCAAATACGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHVMVLN*TQIRFH
Trigger: GTGAAACCGTATTTGCGTTCAGTTCAGAACCATAAC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGTCATAAGCATCTATTaGTGTTCGCAGAGCCTGATA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHVISIY*CSQSLI
Trigger: TATCAGGCTCTGCGAACATCAATAGATGCTTATGAC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTGTTTTTCCAAACGCTaGGCAAGCGAGATATTGTCA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKICFSKR*ASEILS
Trigger: TGACAATATCTCGCTTGCTCAGCGTTTGGAAAAACA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTGTTTTTCCAAACGCTaGGCAAGCGAGATATTGTCA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSCFSKR*ASEILS
Trigger: TGACAATATCTCGCTTGCTCAGCGTTTGGAAAAACA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTCCCCCATTATAAACTaGGAAGTGGGTAAAGACGAT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISPIIN*EVGKDD
Trigger: ATCGTCTTTACCCACTTCTCAGTTTATAATGGGGGA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGGTATGTGTAGCTATTaGGGATTAAGGGATAGTGAA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNGMCSY*GLRDSE
Trigger: TTCACTATCCCTTAATCCTCAATAGCTACACATACC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTTCCCAGCTTTCAGTaGAATTACTTTGCTAGCTGG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHFPSFQ*NYFASW
Trigger: CCAGCTAGCAAAGTAATTGCACTGAAAGCTGGGAAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCACACGATTTTGCTGTaGAGATATACCAGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSHTILL*RYTSQK
Trigger: CTTCTGACTGGTATATCTGCACAGCAAAATCGTGTG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTCCATCTTAAACTGTaGAAAGCTAGCTGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSFHLKL*KASCMS
Trigger: GGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTGCTTTTCACTGATCTaGATTGCAACAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSCFSLI*IATGKS
Trigger: TGATTTTCCTGTTGCAATGCAGATCAGTGAAAAGCA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGACTTGACCTGTTTCTaGAAAGCACTGAATGACTTT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNDLTCF*KALNDF
Trigger: AAAGTCATTCAGTGCTTTGCAGAAACAGGTCAAGTC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGGATAAGGAGGTTTTaGAGATTCCTGTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRIRRF*RFLCSL
Trigger: CAGTGAACACAGGAATCTGCAAAACCTCCTTATCCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTCACCATTCCTTTCTaGAACTGGGCTTTTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSFTIPF*NWAFAS
Trigger: ACTTGCAAAAGCCCAGTTGCAGAAAGGAATGGTGAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCAAAAACACCAGTTCTaGCCAAAGATGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHQKHQF*PKMSLF
Trigger: GAACAAGCTCATCTTTGGGCAGAACTGGTGTTTTTG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAAAGGCTGTCTTTCTTaGACAGCTCTACACTCTGTT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSKGCLS*TALHSV
Trigger: AACAGAGTGTAGAGCTGTGCAAGAAAGACAGCCTTT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGAAGCATACTGCATTaGATCCTTGTAAAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHRSILH*ILVKAV
Trigger: GACAGCCTTTACAAGGATGCAATGCAGTATGCTTCT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTCTGTGTTGATATTTaGACTGAGGGTGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILCVDI*TEGAKA
Trigger: TGCTTTTGCACCCTCAGTGCAAATATCAACACAGAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCCTGCAAGGCTAGAATaGCGATCAAACATTTTCACT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHPARLE*RSNIFT
Trigger: AGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCCTGCAAGGCTAGAATaGCGATCAAACATTTTCACT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIPARLE*RSNIFT
Trigger: AGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTACAGGAAGTCGACTTaGATTCACCTTCTGTACATA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNYRKST*IHLLYI
Trigger: TATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTTCCAGGCATCAGTTaGATGATTCATCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFPGIS*MIHHGN
Trigger: ATTACCATGATGAATCATCCAACTGATGCCTGGAAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCATTTTTCAATAATCTaGGAAGCACTGCAATCCAGT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSHFSII*EALQSS
Trigger: ACTGGATTGCAGTGCTTCCCAGATTATTGAAAAATG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATACAAGATTGGAATCATaGTGCTCTTTGCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNTRLES*CSLLLN
Trigger: ATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTAAGAAGATGGGTGTaGACCACTGCACGTTTTATA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLRRWV*TTARFI
Trigger: TATAAAACGTGCAGTGGTTCACACCCATCTTCTTAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTATTTAGAAGCCACCTaGACACAAATCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSYLEAT*TQICRF
Trigger: GAATCTGCAGATTTGTGTTCAGGTGGCTTCTAAATA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTATTTAGAAGCCACCTaGACACAAATCTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIYLEAT*TQICRF
Trigger: GAATCTGCAGATTTGTGTTCAGGTGGCTTCTAAATA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTCTTTCTACTTCTTTaGTTTGCCCAGTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIFFLLL*FAQSCK
Trigger: CTTGCAAGACTGGGCAAATCAAAGAAGTAGAAAGAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTCTTTCTACTTCTTTaGTTTGCCCAGTCTTGCAAG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHFFLLL*FAQSCK
Trigger: CTTGCAAGACTGGGCAAATCAAAGAAGTAGAAAGAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCATCAGTAGAGAATTaGCCTCTTACAACAAGAATC +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSSVEN*PLTTRI
Trigger: GATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGATTCCTGTGTTCACTaGATACAGAGTTATCAAGGA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSDSCVH*IQSYQG
Trigger: TCCTTGATAACTCTGTATTCAGTGAACACAGGAATC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTGCTCAATTAAGACCTaGACTGCTGAAGTATTGACA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKICSIKT*TAEVLT
Trigger: TGTCAATACTTCAGCAGTTCAGGTCTTAATTGAGCA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTGCTCAATTAAGACCTaGACTGCTGAAGTATTGACA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSCSIKT*TAEVLT
Trigger: TGTCAATACTTCAGCAGTTCAGGTCTTAATTGAGCA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCCAACTTGTTGGATATaGGCATTATTTGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSPTCWI*ALFGPL
Trigger: CAATGGACCAAATAATGCTCATATCCAACAAGTTGG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCCAACTTGTTGGATATaGGCATTATTTGGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIPTCWI*ALFGPL
Trigger: CAATGGACCAAATAATGCTCATATCCAACAAGTTGG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTGTTGTTATGGTTCTaGACTGAACGCAAATACGGT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLLLWF*TERKYG
Trigger: ACCGTATTTGCGTTCAGTTCAGAACCATAACAACAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAATTGCAACTGTGAATaGTGCCACAATAGCAACTAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNNCNCE*CHNSNY
Trigger: ATAGTTGCTATTGTGGCATCATTCACAGTTGCAATT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTACTCCAGTGATAAACTaGATTATCCGTAACAAGAGC +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSTPVIN*IIRNKS
Trigger: GCTCTTGTTACGGATAATGCAGTTTATCACTGGAGT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTCTATTCATGTAGATaGAGGTACCAGTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNFYSCR*RYQSQD
Trigger: ATCTTGAGACTGGTACCTGCATCTACATGAATAGAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGACTTGACCTGTTTCTaGAAAGCACTGAATGACTTT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHDLTCF*KALNDF
Trigger: AAAGTCATTCAGTGCTTTGCAGAAACAGGTCAAGTC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCAGGATCGTAGCAGTTaGTTTCTCTACAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIQDRSS*FLYRFF
Trigger: AAAGAATCTGTAGAGAAAGCAACTGCTACGATCCTG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCAGGATCGTAGCAGTTaGTTTCTCTACAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSQDRSS*FLYRFF
Trigger: AAAGAATCTGTAGAGAAAGCAACTGCTACGATCCTG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTGGAGGAAGGATCATCTaGTTTGATATAAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSGGRII*FDIRIN
Trigger: ATTGATTCTTATATCAAAGCAGATGATCCTTCCTCC...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGTTTGTTTTAGCCAGTaGGAATATCAGTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHVCFSQ*EYQFCL
Trigger: GAGACAGAACTGATATTCGCACTGGCTAAAACAAAC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAAATCCATGATATTGTaGCTCCATGCAGTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHKSMIL*LHAVSR
Trigger: CCTAGAAACTGCATGGAGGCACAATATCATGGATTT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTAAACACTACAGAGTaGAAATCAGGTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLNTTE*KSGSSQ
Trigger: TTGTGAAGAACCTGATTTGCACTCTGTAGTGTTTAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTCTTGCATGGTCATATaGCAGTGTTTTTGCTTTAGC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISCMVI*QCFCFS
Trigger: GCTAAAGCAAAAACACTGGCATATGACCATGCAAGA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTAGCATTTTCTATATaGATAATGGGGAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLAFSI*IMGKPA
Trigger: TGCAGGTTTCCCCATTATGCATATAGAAAATGCTAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAATTGGTCTTCGAATTaGATTACTTGGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSNWSSN*ITWVIH
Trigger: ATGAATGACCCAAGTAATCCAATTCGAAGACCAATT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTTAAAGTGCACATCTaGGTCCTGGCTAAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHFKVHI*VLAKVN
Trigger: GTTAACTTTAGCCAGGACCCAGATGTGCACTTTAAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTACAGGAAGTCGACTTaGATTCACCTTCTGTACATA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHYRKST*IHLLYI
Trigger: TATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAACCTCGGTGTCACTTaGTTAAAATATTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKINLGVT*LKYWRQ
Trigger: CTGTCTCCAATATTTTAACCAAGTGACACCGAGGTT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCCATAAGCAAGAGCTaGATTCACACAACCAATTTT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAISKS*IHTTNF
Trigger: AAAATTGGTTGTGTGAATCCAGCTCTTGCTTATGGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTCATCAGTCATGGTATaGGCCTTCATTTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISSVMV*AFILLF
Trigger: GAAAAGTAAAATGAAGGCTCATACCATGACTGATGA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTCATCAGTCATGGTATaGGCCTTCATTTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSSVMV*AFILLF
Trigger: GAAAAGTAAAATGAAGGCTCATACCATGACTGATGA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTCATCAGTAGAGAATTaGCCTCTTACAACAAGAATC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSSVEN*PLTTRI
Trigger: GATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGAACTGCTGAAGTATTaGCATCAAATTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIELLKY*HQISGK
Trigger: TTTTCCGGAAATTTGATGTCAATACTTCAGCAGTTC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR TCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGAACTGCTGAAGTATTaGCATCAAATTTCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHELLKY*HQISGK
Trigger: TTTTCCGGAAATTTGATGTCAATACTTCAGCAGTTC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR TCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAATTGCAACTGTGAATaGTGCCACAATAGCAACTAT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKINCNCE*CHNSNY
Trigger: ATAGTTGCTATTGTGGCATCATTCACAGTTGCAATT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTGCTTTTCACTGATCTaGATTGCAACAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKICFSLI*IATGKS
Trigger: TGATTTTCCTGTTGCAATGCAGATCAGTGAAAAGCA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTGCTTTTCACTGATCTaGATTGCAACAGGAAAATCA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSCFSLI*IATGKS
Trigger: TGATTTTCCTGTTGCAATGCAGATCAGTGAAAAGCA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAAGAACACCACATCATaGTTTTCACTGATCTGCATT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHKNTTS*FSLICI
Trigger: AATGCAGATCAGTGAAAAGCATGATGTGGTGTTCTT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTCTATTCATGTAGATaGAGGTACCAGTCTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSFYSCR*RYQSQD
Trigger: ATCTTGAGACTGGTACCTGCATCTACATGAATAGAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTGTGGCTTCATGAGGTaGAGTAACAAAAATTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHCGFMR*SNKNCF
Trigger: GAAACAATTTTTGTTACTGCACCTCATGAAGCCACA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGGAGGAAGGATCATCTaGTTTGATATAAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNGGRII*FDIRIN
Trigger: ATTGATTCTTATATCAAAGCAGATGATCCTTCCTCC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACATGATATCTTTGAATTaGCCTTCTTTCCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHMISLN*PSFQAS
Trigger: TGATGCCTGGAAAGAAGGGCAATTCAAAGATATCAT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGTGATGCAACAAAATaGAACGTTAAGACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISDATK*NVKTEL
Trigger: CAACTCAGTCTTAACGTTGCATTTTGTTGCATCACT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAATTGGTCTTCGAATTaGATTACTTGGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNNWSSN*ITWVIH
Trigger: ATGAATGACCCAAGTAATCCAATTCGAAGACCAATT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGATATTGGCAATATCTaGGGCATCATAATTATCCAG +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIDIGNI*GIIIIQ
Trigger: CTGGATAATTATGATGCCCCAGATATTGCCAATATC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGATATTGGCAATATCTaGGGCATCATAATTATCCAG +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHDIGNI*GIIIIQ
Trigger: CTGGATAATTATGATGCCCCAGATATTGCCAATATC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTTCCAGGCATCAGTTaGATGATTCATCATGGTAAT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHFPGIS*MIHHGN
Trigger: ATTACCATGATGAATCATCCAACTGATGCCTGGAAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGGAGGAAGGATCATCTaGTTTGATATAAGAATCAAT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHGGRII*FDIRIN
Trigger: ATTGATTCTTATATCAAAGCAGATGATCCTTCCTCC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTAAACACTACAGAGTaGAAATCAGGTTCTTCACAA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILNTTE*KSGSSQ
Trigger: TTGTGAAGAACCTGATTTGCACTCTGTAGTGTTTAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR GCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTCTCTATGGTTAACTaGAATATAAGCAGCGTTATA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILSMVN*NISSVI
Trigger: TATAACGCTGCTTATATTGCAGTTAACCATAGAGAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAATTGGTCTTCGAATTaGATTACTTGGGTCATTCAT +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSNWSSN*ITWVIH
Trigger: ATGAATGACCCAAGTAATCCAATTCGAAGACCAATT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGGATATAACCATACTTaGTTATCAAGAACACCACAT +
Preference number: 4 (lower is better)
Translates to: FLESLLHFRSLLYSILRHGYNHT*LSRTPH
Trigger: ATGTGGTGTTCTTGATAACCAAGTATGGTTATATCC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGGATATAACCATACTTaGTTATCAAGAACACCACAT +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIGYNHT*LSRTPH
Trigger: ATGTGGTGTTCTTGATAACCAAGTATGGTTATATCC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCAAATTTCCGGAAAATaGCAAATGCTTCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIQISGK*QMLLQT
Trigger: TGTTTGAAGAAGCATTTGCCATTTTCCGGAAATTTG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CCA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCAAATTTCCGGAAAATaGCAAATGCTTCTTCAAACA +
Preference number: 4 (lower is better)
Translates to: LESLLHFRSLLYSILRHSQISGK*QMLLQT
Trigger: TGTTTGAAGAAGCATTTGCCATTTTCCGGAAATTTG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS CCA 90 bp AGCTCGGGTCGGGGGCGGAGGCTCCAGGGGCCAGGAGAGCCGCAATaGCGGAACCGGGCGCAGCGCAGACTCCGGAAACGGCTGAGCCCA +
Preference number: 5 (lower is better)
Translates to: SSGRGRRLQGPGEPQ*RNRAQRRLRKRLSP
Trigger: TGGGCTCAGCCGTTTCCGGAGTCTGCGCTGCGCCCGGTTCCGCCATTGCGGCTCTCCTGGCCCCTGGAGCCTCCGCCCCCGACCCGAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393043.5
ENST00000621829.4
CDS TCA 90 bp AGCCGCAATGGCGGAACCGGGCGCAGCGCAGACTCCGGAAACGGCTaGGCCCAGCGGAAGGATCCCGGCGACAGAACTCCGCCCAGTCGC +
Preference number: 5 (lower is better)
Translates to: SRNGGTGRSADSGNG*AQRKDPGDRTPPSR
Trigger: GCGACTGGGCGGAGTTCTGTCGCCGGGATCCTTCCGCTGGGCTCAGCCGTTTCCGGAGTCTGCGCTGCGCCCGGTTCCGCCATTGCGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621829.4
CDS GCA 90 bp CTGTGGCTGTCCATACGGTGGTGCGGTATAACCATAACCAAAAGGTaGCTGGGGAGGGACGGCAACACTGGGTCCTGCTGTCAGCATCAA +
Preference number: 5 (lower is better)
Translates to: LWLSIRWCGITITKR*LGRDGNTGSCCQHQ
Trigger: TTGATGCTGACAGCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGACAGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS GCA 90 bp TCACATGCTGTACCCAAAGCCAGGCTGTGGCTGTCCATACGGTGGTaGGGTATAACCATAACCAAAAGGTGCCTGGGGAGGGACGGCAAC +
Preference number: 5 (lower is better)
Translates to: SHAVPKARLWLSIRW*GITITKRCLGRDGN
Trigger: GTTGCCGTCCCTCCCCAGGCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGACAGCCACAGCCTGGCTTTGGGTACAGCATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS CCA 90 bp ATCTCACATGCTGTACCCAAAGCCAGGCTGTGGCTGTCCATACGGTaGTGCGGTATAACCATAACCAAAAGGTGCCTGGGGAGGGACGGC +
Preference number: 5 (lower is better)
Translates to: ISHAVPKARLWLSIR*CGITITKRCLGRDG
Trigger: GCCGTCCCTCCCCAGGCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGACAGCCACAGCCTGGCTTTGGGTACAGCATGTGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS CCA 90 bp CAGGATCAGCGCTTCATCTCACATGCTGTACCCAAAGCCAGGCTGTaGCTGTCCATACGGTGGTGCGGTATAACCATAACCAAAAGGTGC +
Preference number: 5 (lower is better)
Translates to: QDQRFISHAVPKARL*LSIRWCGITITKRC
Trigger: GCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGACAGCCACAGCCTGGCTTTGGGTACAGCATGTGAGATGAAGCGCTGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS GCA 90 bp TTTCCATGTTCGAGTACTGTTAGCTTTCCTAGCCCCATCAACAGCTaGCTGATATTCACCCAGGTGAACCAGGGTAGATGCCAAACGTCC +
Preference number: 5 (lower is better)
Translates to: FPCSSTVSFPSPINS*LIFTQVNQGRCQTS
Trigger: GGACGTTTGGCATCTACCCTGGTTCACCTGGGTGAATATCAGGCAGCTGTTGATGGGGCTAGGAAAGCTAACAGTACTCGAACATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000621829.4
CDS CCA 90 bp TCTCCTGTAAGGATTGCTTTCCAGCAGCACGCTGCCCCACAATTCTaGATCCTTTCGACGTACCAGGTAGCGAGAAAGACTTTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SPVRIAFQQHAAPQF*ILSTYQVARKTFEE
Trigger: CTCTTCAAAAGTCTTTCTCGCTACCTGGTACGTCGAAAGGATCCAGAATTGTGGGGCAGCGTGCTGCTGGAAAGCAATCCTTACAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS-3UTR CAA 90 bp GTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTTGGCCCCGAACTGCAAAAGCTCCTGAAAACGAATaGGCAGAATCTGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: VPTSIICNFPPAWPRTAKAPENE*AESGPW
Trigger: CCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAGC...TTTTGCAGTTCGGGGCCAAGCTGGAGGGAAGTTACATATTATTGAAGTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCCAATGTTTGCTGGGTaGATACCCAGGTTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSPMFAG*IPRFWS
Trigger: GCTCCAGAACCTGGGTATCAACCCAGCAAACATTGG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp CCAAAAGCTGTTTTCGCCCTTGCTGAAGTACAGGCCTACAAAGCTCTAAGGATTAAGCTGTTTTCGCCCTaGCTGAAGTACAGGCCTACA +
Preference number: 5 (lower is better)
Translates to: PKAVFALAEVQAYKALRIKLFSP*LKYRPT
Trigger: TGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTT...AATCCTTAGAGCTTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTCTGCAACTGGGCTTTaGCAAGTTGACTCCAGACCG +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSSATGL*QVDSRP
Trigger: CGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAGA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGATGGAGTCACCATGTaGGTCAGGCTTGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSDGVTM*VRLVSN
Trigger: GTTCGAGACAAGCCTGACCAACATGGTGACTCCATC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAAGCTGTTTTCGCCCTaGCTGAAGTACAGGCCTACA +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSKLFSP*LKYRPT
Trigger: TGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTCTGCAACTGGGCTTTaGCAAGTTGACTCCAGACCG +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSATGL*QVDSRP
Trigger: CGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAGA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS TCA 90 bp TCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGCTaGGACACTTTCCTATCTACAGAATATAGCTGCATAGCTCCCACC +
Preference number: 5 (lower is better)
Translates to: SILNCAKLAACPSMG*DTFLSTEYSCIAPT
Trigger: GGTGGGAGCTATGCAGCTATATTCTGTAGATAGGAAAGTGTCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000472129.3
ENST00000584313.5
ENST00000585198.1
ENST00000621829.4
CDS GCA 90 bp AGAATCAATGGCTTCTTTCACCATTCCTTTCTGCAACTGGGCTTTTaGAAGTTGACTCCAGACCGCAGGTTCATTGCAACGTTCAGCAAA +
Preference number: 5 (lower is better)
Translates to: RINGFFHHSFLQLGF*KLTPDRRFIATFSK
Trigger: TTTGCTGAACGTTGCAATGAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAGAAAGGAATGGTGAAAGAAGCCATTGATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS CCA 90 bp AATCTGGCACCCTGCAAGGCTAGAATGGCGATCAAACATTTTCACTaGCTGAGACTCTCCTTCCATACTCCAGTGATAAACTGCATTATC +
Preference number: 5 (lower is better)
Translates to: NLAPCKARMAIKHFH*LRLSFHTPVINCII
Trigger: GATAATGCAGTTTATCACTGGAGTATGGAAGGAGAGTCTCAGCCAGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGGGTGCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS-3UTR CAA 90 bp GTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTTGGCCCCGAACTGCAAAACGCTGTCTGCTGAAATaGGTCTTCGAATTGGATTAC +
Preference number: 5 (lower is better)
Translates to: VPTSIICNFPPAWPRTAKRCLLK*VFELDY
Trigger: GTAATCCAATTCGAAGACCAATTTCAGCAGACAGCG...TTTTGCAGTTCGGGGCCAAGCTGGAGGGAAGTTACATATTATTGAAGTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAGCCTTTTCACACAGTaGAGCAATATGAGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSLFTQ*SNMSPV
Trigger: GACCGGGCTCATATTGCTCAACTGTGTGAAAAGGCT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAGACCGCAGGTTCATaGCAACGTTCAGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQTAGS*QRSANS
Trigger: TGAGTTTGCTGAACGTTGCAATGAACCTGCGGTCTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGAATCATGGTGCTCTTaGCTCCTGAATGGAATGGTC +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSESWCS*LLNGMV
Trigger: GACCATTCCATTCAGGAGCAAAGAGCACCATGATTC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAAGGTCTAAGGTCATaGGTGGAGTATTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQGLRS*VEYCGQ
Trigger: CTGCCCACAATACTCCACCAATGACCTTAGACCTTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS GCA 90 bp CAGGCGGTTAATATACTCCATAACACGTGTACGGTCAGCCTTAATTaGAGTGAGGATAAGGAGGTTTTGCAGATTCCTGTGTTCACTGAA +
Preference number: 5 (lower is better)
Translates to: QAVNILHNTCTVSLN*SEDKEVLQIPVFTE
Trigger: TTCAGTGAACACAGGAATCTGCAAAACCTCCTTATCCTCACTGCAATTAAGGCTGACCGTACACGTGTTATGGAGTATATTAACCGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS-3UTR CAA 90 bp TGGTTCCCTGTAGGTGGTGTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTCTAATGCAGATGAATTaGTCAGACTCCATAGTCAGG +
Preference number: 5 (lower is better)
Translates to: WFPVGGVPTSIICNFPPALMQMN*SDSIVR
Trigger: CCTGACTATGGAGTCTGACAAATTCATCTGCATTAG...AGCTGGAGGGAAGTTACATATTATTGAAGTTGGCACACCACCTACAGGGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAAGGATTCGTATTTGTaGAGCTGTCCCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSKDSYL*SCPWSK
Trigger: TTTGGACCAGGGACAGCTCAACAAATACGAATCCTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTACAGGAAGTCGACTaGGATTCACCTTCTGTACAT +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLQEVD*DSPSVH
Trigger: ATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTGGGCTTTTGCAAGTaGACTCCAGACCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLGFCK*TPDRRF
Trigger: GAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGGTTACAAGAACACGTaGCCTGTTTTCCCCCATTAT +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSGYKNT*PVFPHY
Trigger: ATAATGGGGGAAAACAGGCAACGTGTTCTTGTAACC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGCTCCTGAAAACGAATaGGCAGAATCTGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNAPENE*AESGPW
Trigger: CCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAGC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAACCATTTCTCCAAAAGCTGTTTTCGCCCTTGCTGAAGTACAGGCCTACAAAAAGGATTCGTATTTGTaGAGCTGTCCCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LTISPKAVFALAEVQAYKKDSYL*SCPWSK
Trigger: TTTGGACCAGGGACAGCTCAACAAATACGAATCCTT...TTTGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTTTTGGAGAAATGGTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTAATAGCATCTGCAACTaGAGGCGCATGCATAAGGTT +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGNSICN*RRMHKV
Trigger: AACCTTATGCATGCGCCTCAAGTTGCAGATGCTATT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTCTACTTCTTTGATTaGCCCAGTCTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGFYFFD*PSLASC
Trigger: GCAGCTTGCAAGACTGGGCAAATCAAAGAAGTAGAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCAGACCGCAGGTTCATaGCAACGTTCAGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSQTAGS*QRSANS
Trigger: TGAGTTTGCTGAACGTTGCAATGAACCTGCGGTCTG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTGGGCTTTTGCAAGTaGACTCCAGACCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLGFCK*TPDRRF
Trigger: GAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTGGGCTTTTGCAAGTaGACTCCAGACCGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILGFCK*TPDRRF
Trigger: GAACCTGCGGTCTGGAGTCAACTTGCAAAAGCCCAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGACAGAAGCATACTGCATaGCATCCTTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRQKHTA*HPCKGC
Trigger: ACAGCCTTTACAAGGATGCAATGCAGTATGCTTCTG...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTGCAAAATCCATGATATaGTGCCTCCATGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSAKSMI*CLHAVS
Trigger: AGAAACTGCATGGAGGCACAATATCATGGATTTTGC...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTACCATAAACAATGGGTaGTGTCTCTGTAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSTINNG*CLCSLF
Trigger: GAACAAGCTACAGAGACACAACCCATTGTTTATGGT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTAACGTTAAGACTGAGTaGAACTCAGTGCTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSNVKTE*NSVLSA
Trigger: TGCACTTAGCACTGAGTTCAACTCAGTCTTAACGTT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS TCA 90 bp GAAGATGGGTGTGAACCACTGCACGTTTTATATCATATAAATCAGTaGAATGTTCTAATGCACGCTGCAGTAGGCCAGCCTTTTCACACA +
Preference number: 5 (lower is better)
Translates to: EDGCEPLHVLYHINQ*NVLMHAAVGQPFHT
Trigger: TGTGTGAAAAGGCTGGCCTACTGCAGCGTGCATTAGAACATTTCACTGATTTATATGATATAAAACGTGCAGTGGTTCACACCCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000466513.1
ENST00000621829.4
CDS TCA 90 bp CAAATTTCCGGAAAATGGCAAATGCTTCTTCAAACAGCTCATTGCTaGTGGCGATATTGGCAATATCTGGGGCATCATAATTATCCAGGC +
Preference number: 5 (lower is better)
Translates to: QISGKWQMLLQTAHC*WRYWQYLGHHNYPG
Trigger: GCCTGGATAATTATGATGCCCCAGATATTGCCAATATCGCCATCAGCAATGAGCTGTTTGAAGAAGCATTTGCCATTTTCCGGAAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS CCA 90 bp TGCTTCTTCAAACAGCTCATTGCTGATGGCGATATTGGCAATATCTaGGGCATCATAATTATCCAGGCGGTTAATATACTCCATAACACG +
Preference number: 5 (lower is better)
Translates to: CFFKQLIADGDIGNI*GIIIIQAVNILHNT
Trigger: CGTGTTATGGAGTATATTAACCGCCTGGATAATTATGATGCCCCAGATATTGCCAATATCGCCATCAGCAATGAGCTGTTTGAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCTCCTGAAAACGAATaGGCAGAATCTGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAPENE*AESGPW
Trigger: CCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGCTCCTGAAAACGAATaGGCAGAATCTGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSAPENE*AESGPW
Trigger: CCATGGCCCAGATTCTGCCAATTCGTTTTCAGGAGC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TGGTTCCCTGTAGGTGGTGTGCCAACTTCAATAATATGTAACTTCCCTCCAGCTAAATTGGTCTTCGAATaGGATTACTTGGGTCATTCA +
Preference number: 5 (lower is better)
Translates to: WFPVGGVPTSIICNFPPAKLVFE*DYLGHS
Trigger: TGAATGACCCAAGTAATCCAATTCGAAGACCAATTT...AGCTGGAGGGAAGTTACATATTATTGAAGTTGGCACACCACCTACAGGGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CAA 90 bp TGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTGCATGTCCTTCAATGGGTTCAGTGCAATTACTTaGCTAGCTGGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: CISFHLKLCKASCMSFNGFSAIT*LAGFMM
Trigger: CATCATGAATCCAGCTAGCAAAGTAATTGCACTGAA...CCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584313.5
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTCAGTGCAATTACTTaGCTAGCTGGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSFSAIT*LAGFMM
Trigger: CATCATGAATCCAGCTAGCAAAGTAATTGCACTGAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTCCCACCACACGATTTaGCTGTGCAGATATACCAGT +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSSHHTI*LCRYTS
Trigger: ACTGGTATATCTGCACAGCAAAATCGTGTGGTGGGA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTCTGCAACTGGGCTTTaGCAAGTTGACTCCAGACCG +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSATGL*QVDSRP
Trigger: CGGTCTGGAGTCAACTTGCAAAAGCCCAGTTGCAGA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTACGGTCACCAACTTGTaGGATATGAGCATTATTTGG +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGTVTNL*DMSIIW
Trigger: CCAAATAATGCTCATATCCAACAAGTTGGTGACCGT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTGTCATAAGCATCTATaGATGTTCGCAGAGCCTGAT +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGCHKHL*MFAEPD
Trigger: ATCAGGCTCTGCGAACATCAATAGATGCTTATGACA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGAGCAAAATCCATGATATaGTGCCTCCATGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRAKSMI*CLHAVS
Trigger: AGAAACTGCATGGAGGCACAATATCATGGATTTTGC...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTTTGTGTCTCTGTAGCTaGTTCTTCTTCTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLCLCS*FFFFSQ
Trigger: CTGAGAAAAGAAGAAGAACAAGCTACAGAGACACAA...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTACCATAAACAATGGGTaGTGTCTCTGTAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGTINNG*CLCSLF
Trigger: GAACAAGCTACAGAGACACAACCCATTGTTTATGGT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGATGGAGTCACCATGTaGGTCAGGCTTGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIDGVTM*VRLVSN
Trigger: GTTCGAGACAAGCCTGACCAACATGGTGACTCCATC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAAAGCAGGGGCACCATaGTATTCTTCACTGACCTGC +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNKAGAP*YSSLTC
Trigger: GCAGGTCAGTGAAGAATACAATGGTGCCCCTGCTTT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS GCA 90 bp ATTGGATTACTTGGGTCATTCATATCAATGATTACCACCTGGGCCTaGTCTCCTACTTTTTCTCTAATGCAGATGAATTTGTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: IGLLGSFISMITTWA*SPTFSLMQMNLSDS
Trigger: GGAGTCTGACAAATTCATCTGCATTAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGATATGAATGACCCAAGTAATCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000580081.1
ENST00000584313.5
ENST00000621829.4
CDS GCA 90 bp CATTTTCACTGGCTGAGACTCTCCTTCCATACTCCAGTGATAAACTaGATTATCCGTAACAAGAGCAACCGTATTCAAAGAGATCCATTT +
Preference number: 5 (lower is better)
Translates to: HFHWLRLSFHTPVIN*IIRNKSNRIQRDPF
Trigger: AAATGGATCTCTTTGAATACGGTTGCTCTTGTTACGGATAATGCAGTTTATCACTGGAGTATGGAAGGAGAGTCTCAGCCAGTGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAAGCTGTTTTCGCCCTaGCTGAAGTACAGGCCTACA +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSKLFSP*LKYRPT
Trigger: TGTAGGCCTGTACTTCAGCAAGGGCGAAAACAGCTT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAGCCTTTTCACACAGTaGAGCAATATGAGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSLFTQ*SNMSPV
Trigger: GACCGGGCTCATATTGCTCAACTGTGTGAAAAGGCT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAGCCTTTTCACACAGTaGAGCAATATGAGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISLFTQ*SNMSPV
Trigger: GACCGGGCTCATATTGCTCAACTGTGTGAAAAGGCT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTATTCTTTCTACTTCTTaGATTTGCCCAGTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSILSTS*ICPVLQ
Trigger: TTGCAAGACTGGGCAAATCAAAGAAGTAGAAAGAAT...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTACAGGAAGTCGACTaGGATTCACCTTCTGTACAT +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLQEVD*DSPSVH
Trigger: ATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCAGACCGCAGGTTCATaGCAACGTTCAGCAAACTCA +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHQTAGS*QRSANS
Trigger: TGAGTTTGCTGAACGTTGCAATGAACCTGCGGTCTG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTACAACGGTCACCAACTaGTTGGATATGAGCATTATT +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGTTVTN*LDMSII
Trigger: AATAATGCTCATATCCAACAAGTTGGTGACCGTTGT...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGCAGCTCTTAGCACCTaGGGAATATTCACTCTAGAC +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNAALST*GIFTLD
Trigger: GTCTAGAGTGAATATTCCCAAGGTGCTAAGAGCTGC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TGCAATCCAGTGTACGATGTGCTGATTAGTGTTGTCTTTGTTGGCACTGACAGTCTAAGTAGAACTGTATaGCTCTGTAGTATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: CNPVYDVLISVVFVGTDSLSRTV*LCSIVP
Trigger: TGGAACTATACTACAGAGCAATACAGTTCTACTTAG...ACTGTCAGTGCCAACAAAGACAACACTAATCAGCACATCGTACACTGGATTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCAGAAGCATACTGCATaGCATCCTTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSQKHTA*HPCKGC
Trigger: ACAGCCTTTACAAGGATGCAATGCAGTATGCTTCTG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGAATCATGGTGCTCTTaGCTCCTGAATGGAATGGTC +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNESWCS*LLNGMV
Trigger: GACCATTCCATTCAGGAGCAAAGAGCACCATGATTC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAAAGCAGGGGCACCATaGTATTCTTCACTGACCTGC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIKAGAP*YSSLTC
Trigger: GCAGGTCAGTGAAGAATACAATGGTGCCCCTGCTTT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCAAGGTCTAAGGTCATaGGTGGAGTATTGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIQGLRS*VEYCGQ
Trigger: CTGCCCACAATACTCCACCAATGACCTTAGACCTTG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGAATTATGTTTTCTTCTTCCACACACACTGACAGAACCTTAGGTTTCCCCACACTAAAGTACTCAGTTTaGTCCCTTTCTGTTTACTCC +
Preference number: 5 (lower is better)
Translates to: GIMFSSSTHTDRTLGFPTLKYSV*SLSVYS
Trigger: GGAGTAAACAGAAAGGGACAAAACTGAGTACTTTAG...TGTGGGGAAACCTAAGGTTCTGTCAGTGTGTGTGGAAGAAGAAAACATAATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483176.2
CDS TCA 90 bp ACCGTGGAGACAGCACCATCAGCAAATCATTTAACAACAGAGGCTTaGATTCTAAGTAGAACTGTATTGCTCTGTAGTATAGTTCCACAT +
Preference number: 5 (lower is better)
Translates to: TVETAPSANHLTTEA*ILSRTVLLCSIVPH
Trigger: ATGTGGAACTATACTACAGAGCAATACAGTTCTACTTAGAATTCAAGCCTCTGTTGTTAAATGATTTGCTGATGGTGCTGTCTCCACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000621829.4
CDS CCA 90 bp CTTCGAATTGGATTACTTGGGTCATTCATATCAATGATTACCACCTaGGCCTGCTCTCCTACTTTTTCTCTAATGCAGATGAATTTGTCA +
Preference number: 5 (lower is better)
Translates to: LRIGLLGSFISMITT*ACSPTFSLMQMNLS
Trigger: TGACAAATTCATCTGCATTAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGATATGAATGACCCAAGTAATCCAATTCGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000580081.1
ENST00000584313.5
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCGCTGTCTGCTGAAATaGGTCTTCGAATTGGATTAC +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNRCLLK*VFELDY
Trigger: GTAATCCAATTCGAAGACCAATTTCAGCAGACAGCG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTCCCACCACACGATTTaGCTGTGCAGATATACCAGT +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSSHHTI*LCRYTS
Trigger: ACTGGTATATCTGCACAGCAAAATCGTGTGGTGGGA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTCCCACCACACGATTTaGCTGTGCAGATATACCAGT +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKISHHTI*LCRYTS
Trigger: ACTGGTATATCTGCACAGCAAAATCGTGTGGTGGGA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAAGGATTCGTATTTGTaGAGCTGTCCCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNKDSYL*SCPWSK
Trigger: TTTGGACCAGGGACAGCTCAACAAATACGAATCCTT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTCAATCAGAGACTGAGTaGACAGTTGTTCATGATATT +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGQSETE*TVVHDI
Trigger: AATATCATGAACAACTGTCAACTCAGTCTCTGATTG...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTGCTGATGGCGATATaGGCAATATCTGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILLMAI*AISGAS
Trigger: TGATGCCCCAGATATTGCCAATATCGCCATCAGCAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTGCTGATGGCGATATaGGCAATATCTGGGGCATCA +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLLMAI*AISGAS
Trigger: TGATGCCCCAGATATTGCCAATATCGCCATCAGCAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCAGCTCTTAGCACCTaGGGAATATTCACTCTAGAC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAALST*GIFTLD
Trigger: GTCTAGAGTGAATATTCCCAAGGTGCTAAGAGCTGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGCAGCTCTTAGCACCTaGGGAATATTCACTCTAGAC +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSAALST*GIFTLD
Trigger: GTCTAGAGTGAATATTCCCAAGGTGCTAAGAGCTGC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTTGGTAATGATATCTTaGAATTGCCCTTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGLVMIS*NCPSFQ
Trigger: CTGGAAAGAAGGGCAATTCAAAGATATCATTACCAA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GTAAACACACACAAGATTGGAATCATGGTGCTCTTTGCTCCTGAATGGAATGGTTCCACATTGGCAACCTaGGTAATGATATCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: VNTHKIGIMVLFAPEWNGSTLAT*VMISLN
Trigger: ATTCAAAGATATCATTACCAAGGTTGCCAATGTGGA...ACCATTCCATTCAGGAGCAAAGAGCACCATGATTCCAATCTTGTGTGTGTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTAGTGTTGTCTTTGTaGGCACTGACAGTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLVLSL*ALTVLH
Trigger: ATGCAAGACTGTCAGTGCCAACAAAGACAACACTAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCAGCAGCAGCAGTGTAGAAGAGGAAGGAAAAACATCATGCAAATTCCTTAGATCACCTTTTCCTTTATaGCATCAACCTTTGTCAAGT +
Preference number: 5 (lower is better)
Translates to: SSSSSVEEEGKTSCKFLRSPFPL*HQPLSS
Trigger: ACTTGACAAAGGTTGATGCAATAAAGGAAAAGGTGA...TCTAAGGAATTTGCATGATGTTTTTCCTTCCTCTTCTACACTGCTGCTGCTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475458.1
CDS TCA 90 bp ACTTGTCCCTTTCTGTTTACTCCAATTATTCCAGCTGTGGCTTCATaGGGTGCAGTAACAAAAATTGTTTCTCCACTGATTCTATTCATG +
Preference number: 5 (lower is better)
Translates to: TCPFLFTPIIPAVAS*GAVTKIVSPLILFM
Trigger: CATGAATAGAATCAGTGGAGAAACAATTTTTGTTACTGCACCTCATGAAGCCACAGCTGGAATAATTGGAGTAAACAGAAAGGGACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000472129.3
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTAATGCAGATGAATTaGTCAGACTCCATAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLMQMN*SDSIVR
Trigger: CCTGACTATGGAGTCTGACAAATTCATCTGCATTAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCGCTGTCTGCTGAAATaGGTCTTCGAATTGGATTAC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIRCLLK*VFELDY
Trigger: GTAATCCAATTCGAAGACCAATTTCAGCAGACAGCG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCGCTGTCTGCTGAAATaGGTCTTCGAATTGGATTAC +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSRCLLK*VFELDY
Trigger: GTAATCCAATTCGAAGACCAATTTCAGCAGACAGCG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAAGGATTCGTATTTGTaGAGCTGTCCCTGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSKDSYL*SCPWSK
Trigger: TTTGGACCAGGGACAGCTCAACAAATACGAATCCTT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTAATAGCATCTGCAACTaGAGGCGCATGCATAAGGTT +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSNSICN*RRMHKV
Trigger: AACCTTATGCATGCGCCTCAAGTTGCAGATGCTATT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTCTACTTCTTTGATTaGCCCAGTCTTGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSFYFFD*PSLASC
Trigger: GCAGCTTGCAAGACTGGGCAAATCAAAGAAGTAGAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTACAGGAAGTCGACTaGGATTCACCTTCTGTACAT +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLQEVD*DSPSVH
Trigger: ATGTACAGAAGGTGAATCCAAGTCGACTTCCTGTAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTGTCATAAGCATCTATaGATGTTCGCAGAGCCTGAT +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNCHKHL*MFAEPD
Trigger: ATCAGGCTCTGCGAACATCAATAGATGCTTATGACA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCAGAAGCATACTGCATaGCATCCTTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSQKHTA*HPCKGC
Trigger: ACAGCCTTTACAAGGATGCAATGCAGTATGCTTCTG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCAGAAGCATACTGCATaGCATCCTTGTAAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIQKHTA*HPCKGC
Trigger: ACAGCCTTTACAAGGATGCAATGCAGTATGCTTCTG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATGCAAAATCCATGATATaGTGCCTCCATGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNAKSMI*CLHAVS
Trigger: AGAAACTGCATGGAGGCACAATATCATGGATTTTGC...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAAACCTCGGTGTCACTaGGTTAAAATATTGGAGACA +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSKPRCH*VKILET
Trigger: TGTCTCCAATATTTTAACCAAGTGACACCGAGGTTT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATAACGTTAAGACTGAGTaGAACTCAGTGCTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNNVKTE*NSVLSA
Trigger: TGCACTTAGCACTGAGTTCAACTCAGTCTTAACGTT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCTAATGCAGATGAATTaGTCAGACTCCATAGTCAGG +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLMQMN*SDSIVR
Trigger: CCTGACTATGGAGTCTGACAAATTCATCTGCATTAG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTAATGCAGATGAATTaGTCAGACTCCATAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILMQMN*SDSIVR
Trigger: CCTGACTATGGAGTCTGACAAATTCATCTGCATTAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTAAATTGGTCTTCGAATaGGATTACTTGGGTCATTCA +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSKLVFE*DYLGHS
Trigger: TGAATGACCCAAGTAATCCAATTCGAAGACCAATTT...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTCAGTGCAATTACTTaGCTAGCTGGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNFSAIT*LAGFMM
Trigger: CATCATGAATCCAGCTAGCAAAGTAATTGCACTGAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACACGGTCACCAACTTGTaGGATATGAGCATTATTTGG +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHTVTNL*DMSIIW
Trigger: CCAAATAATGCTCATATCCAACAAGTTGGTGACCGT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTCTAAGTAGAACTGTATaGCTCTGTAGTATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSLSRTV*LCSIVP
Trigger: TGGAACTATACTACAGAGCAATACAGTTCTACTTAG...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTGTCATAAGCATCTATaGATGTTCGCAGAGCCTGAT +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSCHKHL*MFAEPD
Trigger: ATCAGGCTCTGCGAACATCAATAGATGCTTATGACA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACGCAAAATCCATGATATaGTGCCTCCATGCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHAKSMI*CLHAVS
Trigger: AGAAACTGCATGGAGGCACAATATCATGGATTTTGC...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTACCATAAACAATGGGTaGTGTCTCTGTAGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSTINNG*CLCSLF
Trigger: GAACAAGCTACAGAGACACAACCCATTGTTTATGGT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTAGTGTTGTCTTTGTaGGCACTGACAGTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILVLSL*ALTVLH
Trigger: ATGCAAGACTGTCAGTGCCAACAAAGACAACACTAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GAATGTTTACTGGCTGCAAAAGTGATGCAACAAAATGCAACGTTAAGACTGAGTTTCCTAGAACTAACTTaGACAATTAAGGGTGCCTTT +
Preference number: 5 (lower is better)
Translates to: ECLLAAKVMQQNATLRLSFLELT*TIKGAF
Trigger: AAAGGCACCCTTAATTGTCAAAGTTAGTTCTAGGAA...ACTCAGTCTTAACGTTGCATTTTGTTGCATCACTTTTGCAGCCAGTAAACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS GCA 90 bp ATCCTAGTGACTGGACAAGTATTTGGGCAGAATAAGCTATTCTTTTaGCAATTGTGTATAACTTCTGATGATATTGGTTATAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: ILVTGQVFGQNKLFF*QLCITSDDIGYSCR
Trigger: TCTGCAGCTATAACCAATATCATCAGAAGTTATACACAATTGGCAAAAGAATAGCTTATTCTGCCCAAATACTTGTCCAGTCACTAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498711.1
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTCAGTGCAATTACTTaGCTAGCTGGATTCATGATG +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHFSAIT*LAGFMM
Trigger: CATCATGAATCCAGCTAGCAAAGTAATTGCACTGAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATATTCTTTCTACTTCTTaGATTTGCCCAGTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNILSTS*ICPVLQ
Trigger: TTGCAAGACTGGGCAAATCAAAGAAGTAGAAAGAAT...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATCTCATCAGTAGAGAATaGACCTCTTACAACAAGAAT +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNLISRE*TSYNKN
Trigger: ATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGAG...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACACAACGGTCACCAACTaGTTGGATATGAGCATTATT +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHTTVTN*LDMSII
Trigger: AATAATGCTCATATCCAACAAGTTGGTGACCGTTGT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAATGATATCTTTGAATaGCCCTTCTTTCCAGGCATC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKINDIFE*PFFPGI
Trigger: GATGCCTGGAAAGAAGGGCAATTCAAAGATATCATT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAATGATATCTTTGAATaGCCCTTCTTTCCAGGCATC +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHNDIFE*PFFPGI
Trigger: GATGCCTGGAAAGAAGGGCAATTCAAAGATATCATT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTCCACATTGGCAACCTaGGTAATGATATCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNSTLAT*VMISLN
Trigger: ATTCAAAGATATCATTACCAAGGTTGCCAATGTGGA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTGTGTCTCTGTAGCTaGTTCTTCTTCTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLCLCS*FFFFSQ
Trigger: CTGAGAAAAGAAGAAGAACAAGCTACAGAGACACAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTTTGTGTCTCTGTAGCTaGTTCTTCTTCTTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILCLCS*FFFFSQ
Trigger: CTGAGAAAAGAAGAAGAACAAGCTACAGAGACACAA...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp AGCCACTATAGTAGTGACTCTGGTTCTTTAGACTATTGCATGTACCTTGTTAATTTCCTAGAACTAACTTaGACAATTAAGGGTGCCTTT +
Preference number: 5 (lower is better)
Translates to: SHYSSDSGSLDYCMYLVNFLELT*TIKGAF
Trigger: AAAGGCACCCTTAATTGTCAAAGTTAGTTCTAGGAA...ATTAACAAGGTACATGCAATAGTCTAAAGAACCAGAGTCACTACTATAGTGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS GCA 90 bp AAAAGGACAGGATTGTTCCCAACTCATCAGGTTATCTTATTTTATTaGTTAAGTTTCAAGGTTTCCTTACTTGTCCCTTTCTGTTTACTC +
Preference number: 5 (lower is better)
Translates to: KRTGLFPTHQVILFY*LSFKVSLLVPFCLL
Trigger: GAGTAAACAGAAAGGGACAAGTAAGGAAACCTTGAAACTTAAGCAATAAAATAAGATAACCTGATGAGTTGGGAACAATCCTGTCCTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472129.3
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAAATTGGTCTTCGAATaGGATTACTTGGGTCATTCA +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHKLVFE*DYLGHS
Trigger: TGAATGACCCAAGTAATCCAATTCGAAGACCAATTT...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTAAATTGGTCTTCGAATaGGATTACTTGGGTCATTCA +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIKLVFE*DYLGHS
Trigger: TGAATGACCCAAGTAATCCAATTCGAAGACCAATTT...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCAATCAGAGACTGAGTaGACAGTTGTTCATGATATT +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIQSETE*TVVHDI
Trigger: AATATCATGAACAACTGTCAACTCAGTCTCTGATTG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACCAATCAGAGACTGAGTaGACAGTTGTTCATGATATT +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHQSETE*TVVHDI
Trigger: AATATCATGAACAACTGTCAACTCAGTCTCTGATTG...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTATTCTTTCTACTTCTTaGATTTGCCCAGTCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSILSTS*ICPVLQ
Trigger: TTGCAAGACTGGGCAAATCAAAGAAGTAGAAAGAAT...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTCTCATCAGTAGAGAATaGACCTCTTACAACAAGAAT +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKILISRE*TSYNKN
Trigger: ATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGAG...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCTCATCAGTAGAGAATaGACCTCTTACAACAAGAAT +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLISRE*TSYNKN
Trigger: ATTCTTGTTGTAAGAGGTCAATTCTCTACTGATGAG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp GGGTGGCTAAGTAACTGTCATGGCATATCTACTAAAAGGAATACTATGAAAATTGCCAAACGTCCAAAATaGGAAACATTATTGTACAAC +
Preference number: 5 (lower is better)
Translates to: GWLSNCHGISTKRNTMKIAKRPK*ETLLYN
Trigger: GTTGTACAATAATGTTTCCAATTTTGGACGTTTGGC...AATTTTCATAGTATTCCTTTTAGTAGATATGCCATGACAGTTACTTAGCCACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000269122.8
ENST00000621829.4
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTGCCAAACGTCCAAAATaGGAAACATTATTGTACAAC +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSAKRPK*ETLLYN
Trigger: GTTGTACAATAATGTTTCCAATTTTGGACGTTTGGC...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTTGGTAATGATATCTTaGAATTGCCCTTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHLVMIS*NCPSFQ
Trigger: CTGGAAAGAAGGGCAATTCAAAGATATCATTACCAA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTCTTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACTCCACATTGGCAACCTaGGTAATGATATCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: FLESLLHFRSLLYSILRHSTLAT*VMISLN
Trigger: ATTCAAAGATATCATTACCAAGGTTGCCAATGTGGA...GTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTCTAAGTAGAACTGTATaGCTCTGTAGTATAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSLSRTV*LCSIVP
Trigger: TGGAACTATACTACAGAGCAATACAGTTCTACTTAG...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTTTGCACTTTAGAAGCTTGTTGTATTCTATTTTGAGGCACAGTTTCTTAGAAAGCCTTTaGCACTTTAGAAGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LESLLHFRSLLYSILRHSFLESL*HFRSLL
Trigger: CAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAAGAA...ACTGTGCCTCAAAATAGAATACAACAAGCTTCTAAAGTGCAAAAGGCTTTCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393043.5
CDS TCA 72 bp GGCGGAACCGGGCGCAGCGCAGACTCCGGAAACGGCTaGGCCCAGCGGAAGGATCCCGGCGACAGAACTCCG +
Preference number: 6 (lower is better)
Translates to: GGTGRSADSGNG*AQRKDPGDRTP
Trigger: CGGAGTTCTGTCGCCGGGATCCTTCCGCTGGGCTCAGCCGTTTCCGGAGTCTGCGCTGCGCCCGGTTCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393043.5
ENST00000621829.4
CDS CCA 72 bp TTATGGTCTCCTCCTGTCACTGGGGCTGCGGGGCAGTaGCTGCCCGGGCTCTCCAAGGGAGAGGAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: LWSPPVTGAAGQ*LPGLSKGEEEK
Trigger: CTTCTCCTCCTCTCCCTTGGAGAGCCCGGGCAGCCACTGCCCCGCAGCCCCAGTGACAGGAGGAGACCATAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000580081.1
ENST00000584313.5
ENST00000621829.4
CDS CCA 72 bp CGCAGTGCGCCCGGTGCCTCGCTTCCTGACGCCACATaGGGGGAAACAGAGGAACCGGAGGGACTACTTTTT +
Preference number: 6 (lower is better)
Translates to: RSAPGASLPDAT*GETEEPEGLLF
Trigger: AAAAAGTAGTCCCTCCGGTTCCTCTGTTTCCCCCCATGTGGCGTCAGGAAGCGAGGCACCGGGCGCACTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621829.4
CDS GCA 72 bp TCCATACGGTGGTGCGGTATAACCATAACCAAAAGGTaGCTGGGGAGGGACGGCAACACTGGGTCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SIRWCGITITKR*LGRDGNTGSCC
Trigger: ACAGCAGGACCCAGTGTTGCCGTCCCTCCCCAGGCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269122.8
ENST00000472651.5
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS GCA 72 bp GTACCCAAAGCCAGGCTGTGGCTGTCCATACGGTGGTaGGGTATAACCATAACCAAAAGGTGCCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: VPKARLWLSIRW*GITITKRCLGR
Trigger: CCTCCCCAGGCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGACAGCCACAGCCTGGCTTTGGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS CCA 72 bp GCTGTACCCAAAGCCAGGCTGTGGCTGTCCATACGGTaGTGCGGTATAACCATAACCAAAAGGTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AVPKARLWLSIR*CGITITKRCLG
Trigger: CCCCAGGCACCTTTTGGTTATGGTTATACCGCACCACCGTATGGACAGCCACAGCCTGGCTTTGGGTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS GCA 72 bp GGGGTCTCCTGTAAGGATTGCTTTCCAGCAGCACGCTaGCCCACAATTCTGGATCCTTTCGACGTACCAGGT +
Preference number: 6 (lower is better)
Translates to: GVSCKDCFPAAR*PTILDPFDVPG
Trigger: ACCTGGTACGTCGAAAGGATCCAGAATTGTGGGGCAGCGTGCTGCTGGAAAGCAATCCTTACAGGAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS CCA 72 bp AGGATTGCTTTCCAGCAGCACGCTGCCCCACAATTCTaGATCCTTTCGACGTACCAGGTAGCGAGAAAGACT +
Preference number: 6 (lower is better)
Translates to: RIAFQQHAAPQF*ILSTYQVARKT
Trigger: AGTCTTTCTCGCTACCTGGTACGTCGAAAGGATCCAGAATTGTGGGGCAGCGTGCTGCTGGAAAGCAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS GCA 72 bp TCGAGTACTGTTAGCTTTCCTAGCCCCATCAACAGCTaGCTGATATTCACCCAGGTGAACCAGGGTAGATGC +
Preference number: 6 (lower is better)
Translates to: SSTVSFPSPINS*LIFTQVNQGRC
Trigger: GCATCTACCCTGGTTCACCTGGGTGAATATCAGGCAGCTGTTGATGGGGCTAGGAAAGCTAACAGTACTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000621829.4
CDS GCA 72 bp AAACATTCCCATGTGAGCTCGCTCAAGTCCCAGTGCTaGTTCCAACATGGTGATCAGCTCTTCAAAATAGCC +
Preference number: 6 (lower is better)
Translates to: KHSHVSSLKSQC*FQHGDQLFKIA
Trigger: GGCTATTTTGAAGAGCTGATCACCATGTTGGAAGCAGCACTGGGACTTGAGCGAGCTCACATGGGAATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000621829.4
CDS CAA 90 bp ACCACCTGGGCCTGCTCTCCTACTTTTTCTCTAATGCAGATGAATTaGTCAGACTCCATAGTCAGGGTACTGAAGCCAATGTTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: TTWACSPTFSLMQMN*SDSIVRVLKPMFAG
Trigger: CCCAGCAAACATTGGCTTCAGTACCCTGACTATGGAGTCTGACAAATTCATCTGCATTAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000580081.1
ENST00000584313.5
ENST00000621829.4
CDS TCA 72 bp AGGAAGGTCTGCAGTCATGAAAGCCTTTACAGTTACTaGCACTTCTTCAGGGTCCTGAGTCTCAGACAAAGC +
Preference number: 6 (lower is better)
Translates to: RKVCSHESLYSY*HFFRVLSLRQS
Trigger: GCTTTGTCTGAGACTCAGGACCCTGAAGAAGTGTCAGTAACTGTAAAGGCTTTCATGACTGCAGACCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS GCA 72 bp TGCATTTCCTTCCATCTTAAACTGTGCAAAGCTAGCTaGATGTCCTTCAATGGGCTGAGACACTTTCCTATC +
Preference number: 6 (lower is better)
Translates to: CISFHLKLCKAS*MSFNGLRHFPI
Trigger: GATAGGAAAGTGTCTCAGCCCATTGAAGGACATGCAGCTAGCTTTGCACAGTTTAAGATGGAAGGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000472129.3
ENST00000584313.5
ENST00000585198.1
ENST00000621829.4
CDS TCA 72 bp AAGTGGGTAAAGACGATGTTTCAGTACGAAAATAGGTaGCTACAGGATCAGCGCTTCATCTCACATGCTGTA +
Preference number: 6 (lower is better)
Translates to: KWVKTMFQYENR*LQDQRFISHAV
Trigger: TACAGCATGTGAGATGAAGCGCTGATCCTGTAGTCACCTATTTTCGTACTGAAACATCGTCTTTACCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000498711.1
ENST00000579456.5
ENST00000621829.4
CDS GCA 72 bp TGGCTGAGACTCTCCTTCCATACTCCAGTGATAAACTaGATTATCCGTAACAAGAGCAACCGTATTCAAAGA +
Preference number: 6 (lower is better)
Translates to: WLRLSFHTPVIN*IIRNKSNRIQR
Trigger: TCTTTGAATACGGTTGCTCTTGTTACGGATAATGCAGTTTATCACTGGAGTATGGAAGGAGAGTCTCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS GCA 72 bp TTTTGCATCTGTACGGTAATTGATAATCTGGCACCCTaGAAGGCTAGAATGGCGATCAAACATTTTCACTGG +
Preference number: 6 (lower is better)
Translates to: FCICTVIDNLAP*KARMAIKHFHW
Trigger: CCAGTGAAAATGTTTGATCGCCATTCTAGCCTTGCAGGGTGCCAGATTATCAATTACCGTACAGATGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS GCA 72 bp AATATACTCCATAACACGTGTACGGTCAGCCTTAATTaGAGTGAGGATAAGGAGGTTTTGCAGATTCCTGTG +
Preference number: 6 (lower is better)
Translates to: NILHNTCTVSLN*SEDKEVLQIPV
Trigger: CACAGGAATCTGCAAAACCTCCTTATCCTCACTGCAATTAAGGCTGACCGTACACGTGTTATGGAGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS GCA 72 bp CTTGGGTCATTCATATCAATGATTACCACCTGGGCCTaGTCTCCTACTTTTTCTCTAATGCAGATGAATTTG +
Preference number: 6 (lower is better)
Translates to: LGSFISMITTWA*SPTFSLMQMNL
Trigger: CAAATTCATCTGCATTAGAGAAAAAGTAGGAGAGCAGGCCCAGGTGGTAATCATTGATATGAATGACCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000580081.1
ENST00000584313.5
ENST00000621829.4
CDS CCA 72 bp AAACAGCTCATTGCTGATGGCGATATTGGCAATATCTaGGGCATCATAATTATCCAGGCGGTTAATATACTC +
Preference number: 6 (lower is better)
Translates to: KQLIADGDIGNI*GIIIIQAVNIL
Trigger: GAGTATATTAACCGCCTGGATAATTATGATGCCCCAGATATTGCCAATATCGCCATCAGCAATGAGCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS TCA 72 bp CTAGACCAGAACAGCTCCAGGTGCTCCCTCATTTTCTaGGGCTTAAATTTAGAGTATAGAATAGCTAATTCA +
Preference number: 6 (lower is better)
Translates to: LDQNSSRCSLIF*GLNLEYRIANS
Trigger: TGAATTAGCTATTCTATACTCTAAATTTAAGCCTCAGAAAATGAGGGAGCACCTGGAGCTGTTCTGGTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000579456.5
ENST00000621829.4
CDS CAA 90 bp ATCGTAGCAGTTGCTTTCTCTACAGATTCTTTCTACTTCTTTGATTaGCCCAGTCTTGCAAGCTGCCTGAATATATTTAAAGTGCACATC +
Preference number: 6 (lower is better)
Translates to: IVAVAFSTDSFYFFD*PSLASCLNIFKVHI
Trigger: GATGTGCACTTTAAATATATTCAGGCAGCTTGCAAGACTGGGCAAATCAAAGAAGTAGAAAGAATCTGTAGAGAAAGCAACTGCTACGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS CAA 90 bp TGCAGACTGAAGTTTAAGATTCAAGTGGCTCCATATTCAATCTTTTaGCATAAAGAAAGGCTGCATGTTTTAATACTGTGTGGGCTCTGT +
Preference number: 6 (lower is better)
Translates to: CRLKFKIQVAPYSIF*HKERLHVLILCGLC
Trigger: ACAGAGCCCACACAGTATTAAAACATGCAGCCTTTCTTTATGCAAAAAGATTGAATATGGAGCCACTTGAATCTTAAACTTCAGTCTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498711.1
CDS CAA 90 bp GTGACTGGACAAGTATTTGGGCAGAATAAGCTATTCTTTTGCCAATaGTGTATAACTTCTGATGATATTGGTTATAGCTGCAGACTGAAG +
Preference number: 6 (lower is better)
Translates to: VTGQVFGQNKLFFCQ*CITSDDIGYSCRLK
Trigger: CTTCAGTCTGCAGCTATAACCAATATCATCAGAAGTTATACACAATTGGCAAAAGAATAGCTTATTCTGCCCAAATACTTGTCCAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498711.1
CDS CCA 72 bp AGTAAATGGCTACTATATGCTAGCTACTCTTCAAAGTaGATAGTATCAGACAGAAGTAATTCTGTAGAGCAG +
Preference number: 6 (lower is better)
Translates to: SKWLLYASYSSK*IVSDRSNSVEQ
Trigger: CTGCTCTACAGAATTACTTCTGTCTGATACTATCCACTTTGAAGAGTAGCTAGCATATAGTAGCCATTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498711.1
CDS TCA 72 bp CAATATGCTCAATTAAGACCTGAACTGCTGAAGTATTaGCATCAAATTTCCGGAAAATGGCAAATGCTTCTT +
Preference number: 6 (lower is better)
Translates to: QYAQLRPELLKY*HQISGKWQMLL
Trigger: AAGAAGCATTTGCCATTTTCCGGAAATTTGATGTCAATACTTCAGCAGTTCAGGTCTTAATTGAGCATATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269122.8
ENST00000393043.5
ENST00000621829.4
CDS CAA 72 bp CAAGTATTTGGGCAGAATAAGCTATTCTTTTGCCAATaGTGTATAACTTCTGATGATATTGGTTATAGCTGC +
Preference number: 6 (lower is better)
Translates to: QVFGQNKLFFCQ*CITSDDIGYSC
Trigger: GCAGCTATAACCAATATCATCAGAAGTTATACACAATTGGCAAAAGAATAGCTTATTCTGCCCAAATACTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498711.1