RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLTB (Homo sapiens)

Ensembl gene IDs: ENSG00000175416

Ensembl transcript IDs: ENST00000310418.9, ENST00000345807.7, ENST00000502877.1, ENST00000507821.1, ENST00000508425.5, ENST00000509319.1, ENST00000510734.5

Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCATGCTCTGTGGCCATGCACCTAGCAGGCACCTAGCGGGACAGTaGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACAC +
Preference number: 1 (lower is better)
Translates to: PMLCGHAPSRHLAGQ*RLLQGHEHRAQAGH
Trigger: GTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATGGCCACAGAGCATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR TCA 90 bp AGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTaGAGTCACATAGCTGGGCCACCTTCTCCCACTCTGTGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: SAGGTHLCTACCSWG*SHIAGPPSPTLCLG
Trigger: CCCCAGGCACAGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR GCA 90 bp TTCAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTaGTTGCTGCTCTTGGGGTTGAAGTCACATAGCTGGGCCACCTTC +
Preference number: 1 (lower is better)
Translates to: FRDMSTERRRDTSLH*LLLLGLKSHSWATF
Trigger: GAAGGTGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR CCA 90 bp TCGGATGCCCGGTTGTTGATCTTGTTCTTCTCTACTTGTTCACTCTaGCGCTGGTTCCACTCCTCCAGGTCCTTCTTGGCCTTCTCCCGC +
Preference number: 1 (lower is better)
Translates to: SDARLLILFFSTCSL*RWFHSSRSFLAFSR
Trigger: GCGGGAGAAGGCCAAGAAGGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGGCATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR CCA 90 bp ACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGAAGTCACATAGCTaGGCCACCTTCTCCCACTCTGTGCCTGGGGTCTCCTCCTTGGAT +
Preference number: 1 (lower is better)
Translates to: TSLHCLLLLGLKSHS*ATFSHSVPGVSSLD
Trigger: ATCCAAGGAGGAGACCCCAGGCACAGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp GCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 2 (lower is better)
Translates to: AAAASLHPDQSSCSSCAQVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...CTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGGCTGTGGGTAGCAGCTaGTGCGAGTCTCCACCCCGA +
Preference number: 2 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRAVGSS*CESPPR
Trigger: TCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp GGGGAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 2 (lower is better)
Translates to: GEEWNRLWVAAAASLHPDPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...GTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp GGGGAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 2 (lower is better)
Translates to: GEEWNRLWVAAAASLHPDVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...GTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCGCTGTGGGTAGCAGCTaGTGCGAGTCTCCACCCCGA +
Preference number: 2 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSAVGSS*CESPPR
Trigger: TCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGTGCAGCCGTTTCCTCTaGTCCTCTCGCCACTTGCGG +
Preference number: 2 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRCSRFL*SSRHLR
Trigger: CCGCAAGTGGCGAGAGGAGCAGAGGAAACGGCTGCA...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR GCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAACCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 2 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp CATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 2 (lower is better)
Translates to: HAPSRHLAGQWRLLQGHEVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...CTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp CATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGCACCAGCCAAGCGTGTaGTGCGACTCCAGGGATGGC +
Preference number: 2 (lower is better)
Translates to: HAPSRHLAGQWRLLQGHEHQPSV*CDSRDG
Trigger: GCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTG...CTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR CCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGGAGTGGAATAGGCTGTaGGTAGCAGCTGCTGCGAGT +
Preference number: 2 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPREWNRL*VAAAAS
Trigger: ACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTC...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR CCA 90 bp CCCATGCTCTGTGGCCATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGGAGTGGAATAGGCTGTaGGTAGCAGCTGCTGCGAGT +
Preference number: 2 (lower is better)
Translates to: PMLCGHAPSRHLAGQWRLEWNRL*VAAAAS
Trigger: ACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTC...CAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATGGCCACAGAGCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR CAA 90 bp GAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTaGAAGTCACATAGCTGGGCCACCTTCTCCCACTCTGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: ERRRDTSLHCLLLLG*KSHSWATFSHSVPG
Trigger: CCCAGGCACAGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR TCA 90 bp CACCAGCGGCTAGAGCAATGTTCTGACTCCTCCCAAGCTCTGGAGAGAGAAAGGCTAGAATCCCTCTCCTaGGGGGCCCCTCTGCTGGGC +
Preference number: 2 (lower is better)
Translates to: HQRLEQCSDSSQALERERLESLS*GAPLLG
Trigger: GCCCAGCAGAGGGGCCCCTCAGGAGAGGGATTCTAG...CCTTTCTCTCTCCAGAGCTTGGGAGGAGTCAGAACATTGCTCTAGCCGCTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR CAA 90 bp AGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTaGGGGTTGAAGTCACATAGCTGGGCCACCTTCTCCCACTCTGTG +
Preference number: 2 (lower is better)
Translates to: STERRRDTSLHCLLL*GLKSHSWATFSHSV
Trigger: CACAGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR CAA 90 bp GTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTTaGCACTGCTTGCTGCTCTTGGGGTTGAAGTCACATAGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VCFRDMSTERRRDTS*HCLLLLGLKSHSWA
Trigger: GGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR-3UTR GCA 90 bp GGTCTCCTCCTTGGATTCCTTCACGAAAGCCTCCTCGGATGCCCGGTTGTTGATCCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 2 (lower is better)
Translates to: GLLLGFLHESLLGCPVVDPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...ATCAACAACCGGGCATCCGAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR GCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCCCCGACCAAAGCAGCTaGTCCTCCTGTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGPDQSS*SSCAQA
Trigger: GGCCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGG...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
3UTR-3UTR TCA 90 bp CACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGAAATCTAAGCTAAGCTaGGCTGCTGATTCCTCTAAG +
Preference number: 2 (lower is better)
Translates to: HLAGQWRLLQGHEHRAQAKSKLS*AADSSK
Trigger: CTTAGAGGAATCAGCAGCTCAGCTTAGCTTAGATTT...CGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR GCA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGCCCGACCAAAGCAGCTaGTCCTCCTGTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRPDQSS*SSCAQA
Trigger: GGCCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGG...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
3UTR CAA 90 bp GAAAGCCTCCTCGGATGCCCGGTTGTTGATCTTGTTCTTCTCTACTaGTTCACTCTGGCGCTGGTTCCACTCCTCCAGGTCCTTCTTGGC +
Preference number: 2 (lower is better)
Translates to: ESLLGCPVVDLVLLY*FTLALVPLLQVLLG
Trigger: GCCAAGAAGGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGGCATCCGAGGAGGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR CCA 90 bp TGCCCGGTTGTTGATCTTGTTCTTCTCTACTTGTTCACTCTGGCGCTGGTTCCATGGGGAGATCAGTCATaGCCAGGAGGGTTGGCAACC +
Preference number: 2 (lower is better)
Translates to: CPVVDLVLLYLFTLALVPWGDQS*PGGLAT
Trigger: GGTTGCCAACCCTCCTGGCCATGACTGATCTCCCCA...TGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR TCA 90 bp CACCAGCGGCTAGAGCAATGTTCTGACTCCTCCCAAGCTCTGGAGAGAGAAAGGATCCTTCTTTGGGATTaGTCAGCTAAATCTAAGCTA +
Preference number: 2 (lower is better)
Translates to: HQRLEQCSDSSQALERERILLWD*SAKSKL
Trigger: TAGCTTAGATTTAGCTGATCAATCCCAAAGAAGGAT...CCTTTCTCTCTCCAGAGCTTGGGAGGAGTCAGAACATTGCTCTAGCCGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR CCA 72 bp TGTGGCCATGCACCTAGCAGGCACCTAGCGGGACAGTaGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAG +
Preference number: 3 (lower is better)
Translates to: CGHAPSRHLAGQ*RLLQGHEHRAQ
Trigger: CTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATGGCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR CCA 72 bp CCACCTTCTCCCACTCTGTGCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCTCCTCGGATGCCCGGT +
Preference number: 3 (lower is better)
Translates to: PPSPTLCLGSPP*IPSRKPPRMPG
Trigger: ACCGGGCATCCGAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAGGCACAGAGTGGGAGAAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR GCA 72 bp AGAACCTCTGTGGACCCACACCAGCCAAGCGTGTGCTaGGACTCCAGGGATGGCCAAGAGGATGAGCCACAT +
Preference number: 3 (lower is better)
Translates to: RTSVDPHQPSVC*DSRDGQEDEPH
Trigger: ATGTGGCTCATCCTCTTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTGTGGGTCCACAGAGGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR-3UTR CAA 90 bp CATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGTCCTCGGATGCCCGGTaGTTGATCTTGTTCTTCTCT +
Preference number: 3 (lower is better)
Translates to: HAPSRHLAGQWRLLQGHESSDAR*LILFFS
Trigger: AGAGAAGAACAAGATCAACAACCGGGCATCCGAGGA...CTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR GCA 72 bp ATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTaGTTGCTGCTCTTGGGGTTGAAGTCACATAGCTGG +
Preference number: 3 (lower is better)
Translates to: MSTERRRDTSLH*LLLLGLKSHSW
Trigger: CCAGCTATGTGACTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
3UTR CCA 72 bp CGGTTGTTGATCTTGTTCTTCTCTACTTGTTCACTCTaGCGCTGGTTCCACTCCTCCAGGTCCTTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: RLLILFFSTCSL*RWFHSSRSFLA
Trigger: GGCCAAGAAGGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR TCA 72 bp AAGCGTGTGCTGCGACTCCAGGGATGGCCAAGAGGATaGGCCACATCCTTCTTTGGGATTGATCAGCTAAAT +
Preference number: 3 (lower is better)
Translates to: KRVLRLQGWPRG*ATSFFGIDQLN
Trigger: ATTTAGCTGATCAATCCCAAAGAAGGATGTGGCTCATCCTCTTGGCCATCCCTGGAGTCGCAGCACACGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp GCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGCGGCGGGGACGGGCTTaGCGCGGACCGCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: AAAASLHPDQSSCSSCAQRRGRA*RGPHFL
Trigger: GAGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCG...CTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp GTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCGGCGGGGACGGGCTTaGCGCGGACCGCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: VAAAASLHPDQSSCSSCARRGRA*RGPHFL
Trigger: GAGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCG...GGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR TCA 90 bp GCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGTCTGCTTCAGGGACATaGGCACCGAGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: AAAASLHPDQSSCSSCAQSASGT*APSAGG
Trigger: CCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGA...CTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGATGGCTGCCGGCAGGTaGCCCGAAGCCCTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRMAAGR*PEALVV
Trigger: AACGACGAGGGCTTCGGGGCACCTGCCGGCAGCCAT...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGATGGCTGCCGGCAGGTaGCCCGAAGCCCTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: HLAGQWRLLQGHEHRAQAMAAGR*PEALVV
Trigger: AACGACGAGGGCTTCGGGGCACCTGCCGGCAGCCAT...CGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR TCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTCTGCTTCAGGGACATaGGCACCGAGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCSASGT*APSAGG
Trigger: CCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR TCA 90 bp GGGGAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACTCTGCTTCAGGGACATaGGCACCGAGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GEEWNRLWVAAAASLHPDSASGT*APSAGG
Trigger: CCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGA...GTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCATGGCTGCCGGCAGGTaGCCCGAAGCCCTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSMAAGR*PEALVV
Trigger: AACGACGAGGGCTTCGGGGCACCTGCCGGCAGCCAT...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCCCCGACCAAAGCAGCTaGTCCTCCTGTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSPDQSS*SSCAQA
Trigger: GGCCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGG...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CCCATGCTCTGTGGCCATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGCCCGACCAAAGCAGCTaGTCCTCCTGTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PMLCGHAPSRHLAGQWRLPDQSS*SSCAQA
Trigger: GGCCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGG...CAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATGGCCACAGAGCATGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CGGGACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACACAGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 4 (lower is better)
Translates to: RDSGVCFRDMSTERRRDTVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...TGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGAGCTGTGGGTAGCAGCTaGTGCGAGTCTCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: LAGQWRLLQGHEHRAQAGAVGSS*CESPPR
Trigger: TCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC...TCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR TCA 90 bp GACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTCTAGAATCCCTCTCCTaGGGGGCCCCTCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DSGVCFRDMSTERRRDTSLESLS*GAPLLG
Trigger: GCCCAGCAGAGGGGCCCCTCAGGAGAGGGATTCTAG...AGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGCGGGACAGTGGCGTCTaGTTCAGGGACATGAGCACC +
Preference number: 4 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRRDSGV*FRDMST
Trigger: GGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCG...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp AGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 4 (lower is better)
Translates to: SSCCESPPRPKQLLLLCPVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...TGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GGGTTGAAGTCACATAGCTGGGCCACCTTCTCCCACTCTGTGCCTGGGGTCTCCGGGGAGGCGGAGTCCTaGAGGGCCCTTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLKSHSWATFSHSVPGVSGEAES*RALLSL
Trigger: CAGGGACAGAAGGGCCCTGCAGGACTCCGCCTCCCC...GGAGACCCCAGGCACAGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp ATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGATGGCTGCCGGCAGGTaGCCCGAAGCCCTCGTCGTT +
Preference number: 4 (lower is better)
Translates to: MSTERRRDTSLHCLLLLGMAAGR*PEALVV
Trigger: AACGACGAGGGCTTCGGGGCACCTGCCGGCAGCCAT...CCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCCTCGCCACTTGCGGATaGTCTCAGGCTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSLATCG*SQAPGS
Trigger: TGACCCAGGAGCCTGAGAGCATCCGCAAGTGGCGAG...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGCAGCCGTTTCCTCTaGTCCTCTCGCCACTTGCGG +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSCSRFL*SSRHLR
Trigger: CCGCAAGTGGCGAGAGGAGCAGAGGAAACGGCTGCA...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR GCA 90 bp GACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTCCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 4 (lower is better)
Translates to: DSGVCFRDMSTERRRDTSPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...AGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAACCCGACCAAAGCAGCTaGTCCTCCTGTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQPDQSS*SSCAQA
Trigger: GGCCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGG...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp CATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGCCCGACCAAAGCAGCTaGTCCTCCTGTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HAPSRHLAGQWRLLQGHEPDQSS*SSCAQA
Trigger: GGCCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGG...CTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp ACCTCTGTGGACCCACACCAGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAAGCTGTGGGTAGCAGCTaGTGCGAGTCTCCACCCCGA +
Preference number: 4 (lower is better)
Translates to: TSVDPHQPSVCCDSRDGQAVGSS*CESPPR
Trigger: TCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC...TTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTGTGGGTCCACAGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp ACCTCTGTGGACCCACACCAGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAACACCAGCCAAGCGTGTaGTGCGACTCCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: TSVDPHQPSVCCDSRDGQHQPSV*CDSRDG
Trigger: GCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTG...TTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTGTGGGTCCACAGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp AGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAATGCTCTCAGGCTCCTaGGTCAGCCTGTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSCCESPPRPKQLLLLCPMLSGS*VSLSAW
Trigger: CCAGGCTGACAGGCTGACCCAGGAGCCTGAGAGCAT...TGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp GGGGAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACATGCTCTCAGGCTCCTaGGTCAGCCTGTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GEEWNRLWVAAAASLHPDMLSGS*VSLSAW
Trigger: CCAGGCTGACAGGCTGACCCAGGAGCCTGAGAGCAT...GTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp TCCTCTGCTCCTCTCGCCACTTGCGGATGCTCTCAGGCTCCTGGGTCAGCCTGTGGATCTGTGCAGAGGTaGGGAGGCGGAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSAPLATCGCSQAPGSACGSVQR*GGGVLQ
Trigger: CTGCAGGACTCCGCCTCCCCACCTCTGCACAGATCC...ACAGGCTGACCCAGGAGCCTGAGAGCATCCGCAAGTGGCGAGAGGAGCAGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGGGCGGGACACATCTTTaGACTGCTTGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRGGTHL*TACCSW
Trigger: CCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCC...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAGTGGGTAGCAGCTGCTaGGAGTCTCCACCCCGACCA +
Preference number: 4 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQVGSSC*ESPPRP
Trigger: TGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCAC...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCCGGCGGGGACGGGCTTaGCGCGGACCGCACTTCCTC +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGRRGRA*RGPHFL
Trigger: GAGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCG...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTCAGCCTGGGCAATaGCTGCGTAGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSCQPGQ*LRSHQQ
Trigger: CTGCTGATGGCTACGCAGCCATTGCCCAGGCTGACA...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTGTCAGCCTGGGCAATaGCTGCGTAGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCCQPGQ*LRSHQQ
Trigger: CTGCTGATGGCTACGCAGCCATTGCCCAGGCTGACA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTGTCAGCCTGGGCAATaGCTGCGTAGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSCQPGQ*LRSHQQ
Trigger: CTGCTGATGGCTACGCAGCCATTGCCCAGGCTGACA...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp GACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTATGCTCTCAGGCTCCTaGGTCAGCCTGTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DSGVCFRDMSTERRRDTSMLSGS*VSLSAW
Trigger: CCAGGCTGACAGGCTGACCCAGGAGCCTGAGAGCAT...AGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp TCCTCTGCTCCTCTCGCCACTTGCGGATGCTCTCAGGCTCCTGGGTCAGCCTGTATGCTCTCAGGCTCCTaGGTCAGCCTGTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSAPLATCGCSQAPGSACMLSGS*VSLSAW
Trigger: CCAGGCTGACAGGCTGACCCAGGAGCCTGAGAGCAT...ACAGGCTGACCCAGGAGCCTGAGAGCATCCGCAAGTGGCGAGAGGAGCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCCCTCCAGGTCCTTCTTaGCCTTCTCCCGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSPPGPS*PSPAIP
Trigger: AGGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGG...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCAGAAAGGGGCAGGAATaGCCAGGACCAGAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCRKGQE*PGPEGR
Trigger: CCTGCCTTCTGGTCCTGGCCATTCCTGCCCCTTTCT...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp CCCATGCTCTGTGGCCATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGTGGGGAGATCAGTCATaGCCAGGAGGGTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: PMLCGHAPSRHLAGQWRLWGDQS*PGGLAT
Trigger: GGTTGCCAACCCTCCTGGCCATGACTGATCTCCCCA...CAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATGGCCACAGAGCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTGCTGCTCTTGGGGTTaGAGTCACATAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCCCSWG*SHIAGP
Trigger: TGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTTGCAGCCGTTTCCTCTaGTCCTCTCGCCACTTGCGG +
Preference number: 4 (lower is better)
Translates to: EHRAQAGHIFALLAALGVCSRFL*SSRHLR
Trigger: CCGCAAGTGGCGAGAGGAGCAGAGGAAACGGCTGCA...AACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCGGCGGGACACATCTTTaGACTGCTTGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLGGTHL*TACCSW
Trigger: CCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCC...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCGGCGGGACACATCTTTaGACTGCTTGCTGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSGGTHL*TACCSW
Trigger: CCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCC...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp ATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGCAGCCAAGCGTGTGCTaGGACTCCAGGGATGGCCAA +
Preference number: 4 (lower is better)
Translates to: MSTERRRDTSLHCLLLLGQPSVC*DSRDGQ
Trigger: TTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTG...CCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRLGSPP*IPSRKP
Trigger: AGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAG...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp AGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGAGTGGAATAGGCTGTaGGTAGCAGCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: SSCCESPPRPKQLLLLCPEWNRL*VAAAAS
Trigger: ACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTC...TGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCGGAGGCGTGAGGGGCTaGACCAGAGGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGGGVRG*TRGPGG
Trigger: CCCTCCTGGCCCTCTGGTCCAGCCCCTCACGCCTCC...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp GGGGAGATCAGTCATGGCCAGGAGGGTTGGCAACCAGGAGAGATCACCAGCGGCCATGGCCAGGAGGGTTaGCAACCAGGAGAGATCACC +
Preference number: 4 (lower is better)
Translates to: GEISHGQEGWQPGEITSGHGQEG*QPGEIT
Trigger: GGTGATCTCTCCTGGTTGCCAACCCTCCTGGCCATG...GCCGCTGGTGATCTCTCCTGGTTGCCAACCCTCCTGGCCATGACTGATCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCGGCTGTATTGGCAACTaGGTTTGTAGCTGGACCCGC +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSGCIGN*VCSWTR
Trigger: GCGGGTCCAGCTACAAACCCAGTTGCCAATACAGCC...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLLGSPP*IPSRKP
Trigger: CGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAG...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508425.5
CDS-3UTR TCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCGGACCGTTGGCCTCCTaGAACACATCTCCATTGACT +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSGPLAS*NTSPLT
Trigger: AGTCAATGGAGATGTGTTTCAGGAGGCCAACGGTCC...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
CDS-3UTR TCA 90 bp CCACACCAGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAAGAGGATGAGCCAGGATGGCCAAGAGGATaGGCCACATCCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PHQPSVCCDSRDGQEDEPGWPRG*ATSFFG
Trigger: CCCAAAGAAGGATGTGGCTCATCCTCTTGGCCATCC...TGGCTCATCCTCTTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp GGACATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTCGGGACAGTGGCGTCTaGTTCAGGGACATGAGCACC +
Preference number: 4 (lower is better)
Translates to: GHEHRAQAGHIFALLAALRDSGV*FRDMST
Trigger: GGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCG...AAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp ACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGAAGCGGGACAGTGGCGTCTaGTTCAGGGACATGAGCACC +
Preference number: 4 (lower is better)
Translates to: TERRRDTSLHCLLLLGLKRDSGV*FRDMST
Trigger: GGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCG...CTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCATCAGCAGGACCGTTaGCCTCCTGAAACACATCTC +
Preference number: 4 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLHQQDR*PPETHL
Trigger: GAGATGTGTTTCAGGAGGCCAACGGTCCTGCTGATG...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
CDS-3UTR CCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAATGTTCACTCTGGCGCTaGTTCCACTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQCSLWR*FHSSRS
Trigger: GGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACA...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp GTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCTCTACTTGTTCACTCTaGCGCTGGTTCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VAAAASLHPDQSSCSSCASTCSL*RWFHSS
Trigger: GGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGA...GGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCTACTTGTTCACTCTaGCGCTGGTTCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSSTCSL*RWFHSS
Trigger: GGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGA...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp GTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VAAAASLHPDQSSCSSCALGSPP*IPSRKP
Trigger: AGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAG...GGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCLGSPP*IPSRKP
Trigger: AGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAG...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CCA 90 bp GACAGTGGCGTCTGCTTCAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTGAGTGGAATAGGCTGTaGGTAGCAGCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: DSGVCFRDMSTERRRDTSEWNRL*VAAAAS
Trigger: ACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTC...AGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGACGCCACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp AGCAGGACCGTTGGCCTCCTGAGCATCTCAGTGGGGAGATCAGTCATGGCCAGGAACTGGGTTTGTAGCTaGACCCGCTGGTGGTGCACG +
Preference number: 4 (lower is better)
Translates to: SRTVGLLSISVGRSVMARNWVCS*TRWWCT
Trigger: CGTGCACCACCAGCGGGTCCAGCTACAAACCCAGTT...CCTGGCCATGACTGATCTCCCCACTGAGATGCTCAGGAGGCCAACGGTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp ACCTCTGTGGACCCACACCAGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAATTCTGTCCCTGCCCCTaGCTGTGCCAAATGGAACTG +
Preference number: 4 (lower is better)
Translates to: TSVDPHQPSVCCDSRDGQFCPCP*LCQMEL
Trigger: CAGTTCCATTTGGCACAGCCAGGGGCAGGGACAGAA...TTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTGTGGGTCCACAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCGAAACACATCTCCATTaGCTGTGGTCCCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSETHLH*LWSPCP
Trigger: AGGACATGGGGACCACAGTCAATGGAGATGTGTTTC...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR TCA 90 bp CATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGTGCTGCTCTTGGGGTTaGAGTCACATAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HEHRAQAGHIFALLAALGCCSWG*SHIAGP
Trigger: TGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCA...CCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR GCA 90 bp GGGGAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACTTCCGTGACCTTAGATaGAGCATCCAGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GEEWNRLWVAAAASLHPDFRDLR*SIQLLQ
Trigger: CTGCAAGAGCTGGATGCTGCATCTAAGGTCACGGAA...GTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR GCA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCTTCCGTGACCTTAGATaGAGCATCCAGCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLFRDLR*SIQLLQ
Trigger: CTGCAAGAGCTGGATGCTGCATCTAAGGTCACGGAA...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR GCA 90 bp GGACATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGAAAGCCGTTTCCTCTaGTCCTCTCGCCACTTGCGG +
Preference number: 4 (lower is better)
Translates to: GHEHRAQAGHIFALLAALESRFL*SSRHLR
Trigger: CCGCAAGTGGCGAGAGGAGCAGAGGAAACGGCTTTC...AAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508425.5
CDS-3UTR CCA 90 bp CCACTCCTCCAGGTCCTTCTTGGCCTTCTCCCGCCATTCCTGTTCCGTGACCTTCCTCCAGGTCCTTCTTaGCCTTCTCCCGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: PLLQVLLGLLPPFLFRDLPPGPS*PSPAIP
Trigger: AGGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGG...AAGGTCACGGAACAGGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTTGAAGTCACATAGCTaGGCCACCTTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCLKSHS*ATFSHS
Trigger: AGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp CCCATGCTCTGTGGCCATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGTTGAAGTCACATAGCTaGGCCACCTTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PMLCGHAPSRHLAGQWRLLKSHS*ATFSHS
Trigger: AGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAA...CAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATGGCCACAGAGCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAGAGTGGAATAGGCTGTaGGTAGCAGCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQEWNRL*VAAAAS
Trigger: ACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTC...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCCTGGCTGTGCCAAATaGAACTGGAATAGTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLPGCAK*NWNSCG
Trigger: CCCACAACTATTCCAGTTCCATTTGGCACAGCCAGG...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAATGCCACGTAGCCGATaGTATCAGCATCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQMPRSR*YQHLAA
Trigger: AGCAGCCAGATGCTGATATCATCGGCTACGTGGCAT...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR TCA 90 bp GGGGAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCGGATGCCCGGTTGTTaGTCTTGTTCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: GEEWNRLWVAAAASLHPDRMPGC*SCSSLL
Trigger: AAGTAGAGAAGAACAAGATCAACAACCGGGCATCCG...GTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS-3UTR GCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCCCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp ATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTCTACTTGTTCACTCTaGCGCTGGTTCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: MSTERRRDTSLHCLLLLGSTCSL*RWFHSS
Trigger: GGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGA...CCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp CCACACCAGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAAGAGGATGAGCCATTGAAGTCACATAGCTaGGCCACCTTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PHQPSVCCDSRDGQEDEPLKSHS*ATFSHS
Trigger: AGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAA...TGGCTCATCCTCTTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGAGGCGTGAGGGGCTaGACCAGAGGGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRGGVRG*TRGPGG
Trigger: CCCTCCTGGCCCTCTGGTCCAGCCCCTCACGCCTCC...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp AGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAAGAGGATGAGCCACATCCTTCATCAGCAGGACCGTTaGCCTCCTGAGCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: SQACAATPGMAKRMSHILHQQDR*PPEHLS
Trigger: ACTGAGATGCTCAGGAGGCCAACGGTCCTGCTGATG...AAGGATGTGGCTCATCCTCTTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp CAGGGACATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTGAAACACATCTCCATTaGCTGTGGTCCCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: QGHEHRAQAGHIFALLAAETHLH*LWSPCP
Trigger: AGGACATGGGGACCACAGTCAATGGAGATGTGTTTC...AGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR TCA 90 bp CACTCTGTGCCTGGGGTCTCCTCCTTGGATTCCTTCACGAAAGCCTCCTCGGATTGCTGCTCTTGGGGTTaGAGTCACATAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: HSVPGVSSLDSFTKASSDCCSWG*SHIAGP
Trigger: TGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCA...ATCCGAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAGGCACAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR GCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCCGGGACAGTGGCGTCTaGTTCAGGGACATGAGCACC +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGRDSGV*FRDMST
Trigger: GGTGCTCATGTCCCTGAAGCAGACGCCACTGTCCCG...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp GGTCTCCTCCTTGGATTCCTTCACGAAAGCCTCCTCGGATGCCCGGTTGTTGATTGTCAGCCTGGGCAATaGCTGCGTAGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLLLGFLHESLLGCPVVDCQPGQ*LRSHQQ
Trigger: CTGCTGATGGCTACGCAGCCATTGCCCAGGCTGACA...ATCAACAACCGGGCATCCGAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAATTGAAGTCACATAGCTaGGCCACCTTCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQLKSHS*ATFSHS
Trigger: AGAGTGGGAGAAGGTGGCCCAGCTATGTGACTTCAA...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CCA 90 bp CTCCAGGTCCTTCTTGGCCTTCTCCCGCCATTCCTGTTCCGTGACCTTAGATGCACTCCTCCCAAGCTCTaGAGAGAGAAAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQVLLGLLPPFLFRDLRCTPPKL*REKGAG
Trigger: TCCTGCCCCTTTCTCTCTCCAGAGCTTGGGAGGAGT...GCATCTAAGGTCACGGAACAGGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp GGACATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGAAACACATCTCCATTaGCTGTGGTCCCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: GHEHRAQAGHIFALLAALETHLH*LWSPCP
Trigger: AGGACATGGGGACCACAGTCAATGGAGATGTGTTTC...AAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR TCA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGTCTGCTTCAGGGACATaGGCACCGAGCGCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRSASGT*APSAGG
Trigger: CCCGCCTGCGCTCGGTGCTCATGTCCCTGAAGCAGA...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR GCA 90 bp GGATGCCCGGTTGTTGATCTTGTTCTTCTCTACTTGTTCACTCTGGCGCTGGTTCCCAGGCCCAGCCCATaGTCTGTGGCCATGCACCTA +
Preference number: 4 (lower is better)
Translates to: GCPVVDLVLLYLFTLALVPRPSP*SVAMHL
Trigger: TAGGTGCATGGCCACAGAGCATGGGCTGGGCCTGGG...AACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCCCTCCAGGTCCTTCTTaGCCTTCTCCCGCCATTCCT +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGPPGPS*PSPAIP
Trigger: AGGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGG...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCGATGATATCAGCATCTaGCTGCTGGTAGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSDDISI*LLVECF
Trigger: AAAGCATTCTACCAGCAGCCAGATGCTGATATCATC...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CCA 90 bp CACCAGCGGCTAGAGCAATGTTCTGACTCCTCCCAAGCTCTGGAGAGAGAAAGGGAGTGGAATAGGCTGTaGGTAGCAGCTGCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: HQRLEQCSDSSQALEREREWNRL*VAAAAS
Trigger: ACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTC...CCTTTCTCTCTCCAGAGCTTGGGAGGAGTCAGAACATTGCTCTAGCCGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCTGCTGCTCTTGGGGTTaGAGTCACATAGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGCCSWG*SHIAGP
Trigger: TGGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCA...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CCA 90 bp AGCCAAGCGTGTGCTGCGACTCCAGGGATGGCCAAGAGGATGAGCCACATCCTTTGTGCCAAATGGAACTaGAATAGTTGTGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQACAATPGMAKRMSHILCAKWN*NSCGQA
Trigger: AGCCTGCCCACAACTATTCCAGTTCCATTTGGCACA...AAGGATGTGGCTCATCCTCTTGGCCATCCCTGGAGTCGCAGCACACGCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
3UTR CAA 72 bp CTCGGATGCCCGGTTGTTGATCTTGTTCTTCTCTACTaGTTCACTCTGGCGCTGGTTCCACTCCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LGCPVVDLVLLY*FTLALVPLLQV
Trigger: GACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGGCATCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCGAAACACATCTCCATTaGCTGTGGTCCCCATGTCCT +
Preference number: 4 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGETHLH*LWSPCP
Trigger: AGGACATGGGGACCACAGTCAATGGAGATGTGTTTC...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR TCA 90 bp GGTCTCCTCCTTGGATTCCTTCACGAAAGCCTCCTCGGATGCCCGGTTGTTGATCGGATGCCCGGTTGTTaGTCTTGTTCTTCTCTACTT +
Preference number: 4 (lower is better)
Translates to: GLLLGFLHESLLGCPVVDRMPGC*SCSSLL
Trigger: AAGTAGAGAAGAACAAGATCAACAACCGGGCATCCG...ATCAACAACCGGGCATCCGAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR TCA 90 bp ACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGAAGAAATCTAAGCTAAGCTaGGCTGCTGATTCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TERRRDTSLHCLLLLGLKKSKLS*AADSSK
Trigger: CTTAGAGGAATCAGCAGCTCAGCTTAGCTTAGATTT...CTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGTGTTCACTCTGGCGCTaGTTCCACTCCTCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRCSLWR*FHSSRS
Trigger: GGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACA...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR TCA 90 bp AGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGATCCTTCTTTGGGATTaGTCAGCTAAATCTAAGCTA +
Preference number: 4 (lower is better)
Translates to: STERRRDTSLHCLLLLGLILLWD*SAKSKL
Trigger: TAGCTTAGATTTAGCTGATCAATCCCAAAGAAGGAT...CAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CCA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGCATCAGCAGGACCGTTaGCCTCCTGAAACACATCTC +
Preference number: 4 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRHQQDR*PPETHL
Trigger: GAGATGTGTTTCAGGAGGCCAACGGTCCTGCTGATG...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR GCA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGTGGCTGCTGGTAGAATaGTTTGTCAGCGATCCGGTT +
Preference number: 4 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRWLLVE*FVSDPV
Trigger: AACCGGATCGCTGACAAAGCATTCTACCAGCAGCCA...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CAA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGTCGGCGGGGACGGGCTaGGCGCGGACCGCACTTCCT +
Preference number: 5 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRSAGTG*ARTALP
Trigger: AGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCGA...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCTCGGCGGGGACGGGCTaGGCGCGGACCGCACTTCCT +
Preference number: 5 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLSAGTG*ARTALP
Trigger: AGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCGA...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTCGGCGGGGACGGGCTaGGCGCGGACCGCACTTCCT +
Preference number: 5 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCSAGTG*ARTALP
Trigger: AGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCGA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS CCA 90 bp GCGTGGAGGGCACGGGACGAGCGCTGGACACTCCATCAGAGGGGCTaGGCTTTACATCCCCCTTCTGCCACTCACTGGACTCGCGACCTT +
Preference number: 5 (lower is better)
Translates to: AWRARDERWTLHQRG*ALHPPSATHWTRDL
Trigger: AAGGTCGCGAGTCCAGTGAGTGGCAGAAGGGGGATGTAAAGCCCAGCCCCTCTGATGGAGTGTCCAGCGCTCGTCCCGTGCCCTCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS-3UTR CAA 90 bp AGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCATGCTCCTCTCGCCACTaGCGGATGCTCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: SSCCESPPRPKQLLLLCPCSSRH*RMLSGS
Trigger: GGAGCCTGAGAGCATCCGCAAGTGGCGAGAGGAGCA...TGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGTCCTCCAGGTCCTTCTaGGCCTTCTCCCGCCATTCC +
Preference number: 5 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPRSSRSF*AFSRHS
Trigger: GGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGGA...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCTCCTCCAGGTCCTTCTaGGCCTTCTCCCGCCATTCC +
Preference number: 5 (lower is better)
Translates to: VAAAASLHPDQSSCSSCASSRSF*AFSRHS
Trigger: GGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGGA...GGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS CCA 90 bp TGGGCAGGCTCGTCCTTAGGCTGTATTGGCAACTGGGTTTGTAGCTaGACCCGCTGGTGGTGCACGGGCTCAGCCTCCCACTGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: WAGSSLGCIGNWVCS*TRWWCTGSASHCWD
Trigger: ATCCCAGCAGTGGGAGGCTGAGCCCGTGCACCACCAGCGGGTCCAGCTACAAACCCAGTTGCCAATACAGCCTAAGGACGAGCCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509319.1
CDS-3UTR CAA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTGCAGCATCCAGCTCTaGCAGCCGTTTCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCCSIQL*QPFPLL
Trigger: GAGCAGAGGAAACGGCTGCAAGAGCTGGATGCTGCA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGTTGCTGCTCTTGGGGTaGAAGTCACATAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AAAASLHPDQSSCSSCAQLLLLG*KSHSWA
Trigger: GGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAA...CTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp CATGCACCTAGCAGGCACCTAGCGGGACAGTGGCGTCTGCTTCAGGGACATGAGTCCTCCAGGTCCTTCTaGGCCTTCTCCCGCCATTCC +
Preference number: 5 (lower is better)
Translates to: HAPSRHLAGQWRLLQGHESSRSF*AFSRHS
Trigger: GGAATGGCGGGAGAAGGCCAAGAAGGACCTGGAGGA...CTCATGTCCCTGAAGCAGACGCCACTGTCCCGCTAGGTGCCTGCTAGGTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CAA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTTGCTGCTCTTGGGGTaGAAGTCACATAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSLLLLG*KSHSWA
Trigger: GGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAA...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCTTGCTGCTCTTGGGGTaGAAGTCACATAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLLLLLG*KSHSWA
Trigger: GGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAA...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCAGGCGGGACACATCTTaGCACTGCTTGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLRRDTS*HCLLLL
Trigger: CAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCT...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp CAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGGGAGGGACAGTCACAATaGAGTAGACTGAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLLRVSTPTKAAAPPVPREGQSQ*SRLRGG
Trigger: GCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTC...CCTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS CCA 90 bp TCGTCCTTAGGCTGTATTGGCAACTGGGTTTGTAGCTGGACCCGCTaGTGGTGCACGGGCTCAGCCTCCCACTGCTGGGATTACAGGCGT +
Preference number: 5 (lower is better)
Translates to: SSLGCIGNWVCSWTR*WCTGSASHCWDYRR
Trigger: ACGCCTGTAATCCCAGCAGTGGGAGGCTGAGCCCGTGCACCACCAGCGGGTCCAGCTACAAACCCAGTTGCCAATACAGCCTAAGGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509319.1
CDS-3UTR CAA 90 bp AGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGTCATGGCCAGGAGGGTaGGCAACCAGGAGAGATCAC +
Preference number: 5 (lower is better)
Translates to: STERRRDTSLHCLLLLGLSWPGG*ATRRDH
Trigger: GTGATCTCTCCTGGTTGCCAACCCTCCTGGCCATGA...CAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS-3UTR CAA 90 bp ATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGCTGCTCTTGGGGTaGAAGTCACATAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: MSTERRRDTSLHCLLLLGLLLLG*KSHSWA
Trigger: GGCCCAGCTATGTGACTTCAACCCCAAGAGCAGCAA...CCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp CATGAGCACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGAGGCGGGACACATCTTaGCACTGCTTGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: HEHRAQAGHIFALLAALGRRDTS*HCLLLL
Trigger: CAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCT...CCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGTGCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTCCTCGGATGCCCGGTaGTTGATCTTGTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCSSDAR*LILFFS
Trigger: AGAGAAGAACAAGATCAACAACCGGGCATCCGAGGA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCTCCTCGGATGCCCGGTaGTTGATCTTGTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AVGSSCCESPPRPKQLLLSSDAR*LILFFS
Trigger: AGAGAAGAACAAGATCAACAACCGGGCATCCGAGGA...GAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCTTGTTCTTCTCTACTaGTTCACTCTGGCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: VAAAASLHPDQSSCSSCALVLLY*FTLALV
Trigger: AACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAG...GGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCCAGTCAGCGATCCGGTTGTaGATCTTGTTCTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: AAAASLHPDQSSCSSCAQSAIRL*ILFFST
Trigger: AGTAGAGAAGAACAAGATCAACAACCGGATCGCTGA...CTGGGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CAA 90 bp ACCGAGCGCAGGCGGGACACATCTTTGCACTGCTTGCTGCTCTTGGGGTTGAAGAGGCGGGACACATCTTaGCACTGCTTGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: TERRRDTSLHCLLLLGLKRRDTS*HCLLLL
Trigger: CAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCT...CTTCAACCCCAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCTGCGCTCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508425.5
ENST00000510734.5
CDS-3UTR CAA 90 bp GAGGAGTGGAATAGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAGAGGGACAGTCACAATaGAGTAGACTGAGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: EEWNRLWVAAAASLHPDQEGQSQ*SRLRGG
Trigger: GCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTC...TTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCTATTCCACTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CAA 90 bp AGGCTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCGGATGCCCGGTTGTaGATCTTGTTCTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: RLWVAAAASLHPDQSSCSSDARL*ILFFST
Trigger: AGTAGAGAAGAACAAGATCAACAACCGGGCATCCGA...GGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp GGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCTCGGATGCCCGGTTGTaGATCTTGTTCTTCTCTACT +
Preference number: 5 (lower is better)
Translates to: GSSCCESPPRPKQLLLLCSDARL*ILFFST
Trigger: AGTAGAGAAGAACAAGATCAACAACCGGGCATCCGA...GCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS TCA 90 bp CGACCTTTGAGAAGTCCCTTCCCTGGGCAGCTTGGCTTTCAAACCTaGGCATCTCAGTGGGGAGATCAGTCATGGCCAGGAGGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RPLRSPFPGQLGFQT*ASQWGDQSWPGGLA
Trigger: TGCCAACCCTCCTGGCCATGACTGATCTCCCCACTGAGATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 90 bp CTCACTGGACTCGCGACCTTTGAGAAGTCCCTTCCCTGGGCAGCTTaGCTTTCAAACCTGAGCATCTCAGTGGGGAGATCAGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: LTGLATFEKSLPWAA*LSNLSISVGRSVMA
Trigger: GGCCATGACTGATCTCCCCACTGAGATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAGTCCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 90 bp CGTATAAACCAAATGAATAAACAAGTAGCTGGGTACACAGGGGCGTaGAGGGCACGGGACGAGCGCTGGACACTCCATCAGAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RINQMNKQVAGYTGA*RARDERWTLHQRGW
Trigger: CCAGCCCCTCTGATGGAGTGTCCAGCGCTCGTCCCGTGCCCTCCACGCCCCTGTGTACCCAGCTACTTGTTTATTCATTTGGTTTATACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS-3UTR CAA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTTGTCAGCGATCCGGTaGTTGATCTTGTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSLSAIR*LILFFS
Trigger: AGAGAAGAACAAGATCAACAACCGGATCGCTGACAA...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CAA 90 bp GTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCTGTGCCGCCCGGTTGTTGATCTaGTTCTTCTCTACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: VAAAASLHPDQSSCSSCAARLLI*FFSTCS
Trigger: TGAACAAGTAGAGAAGAACAAGATCAACAACCGGGC...GGCACAGGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS-3UTR CAA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCGCCCGGTTGTTGATCTaGTTCTTCTCTACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSARLLI*FFSTCS
Trigger: TGAACAAGTAGAGAAGAACAAGATCAACAACCGGGC...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345807.7
ENST00000510734.5
CDS TCA 90 bp TGGGCTTTACATCCCCCTTCTGCCACTCACTGGACTCGCGACCTTTaGGAAGTCCCTTCCCTGGGCAGCTTGGCTTTCAAACCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: WALHPPSATHWTRDL*EVPSLGSLAFKPEH
Trigger: ATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAGTCCAGTGAGTGGCAGAAGGGGGATGTAAAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 90 bp CTTCTGCCACTCACTGGACTCGCGACCTTTGAGAAGTCCCTTCCCTaGGCAGCTTGGCTTTCAAACCTGAGCATCTCAGTGGGGAGATCA +
Preference number: 5 (lower is better)
Translates to: LLPLTGLATFEKSLP*AAWLSNLSISVGRS
Trigger: TGATCTCCCCACTGAGATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAGTCCAGTGAGTGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS-3UTR CAA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCTGCAGCATCCAGCTCTaGCAGCCGTTTCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGCSIQL*QPFPLL
Trigger: GAGCAGAGGAAACGGCTGCAAGAGCTGGATGCTGCA...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CAA 90 bp CATAGCTGGGCCACCTTCTCCCACTCTGTGCCTGGGGTCTCCTCCTTGGATTCCCTTGTTCTTCTCTACTaGTTCACTCTGGCGCTGGTT +
Preference number: 5 (lower is better)
Translates to: HSWATFSHSVPGVSSLDSLVLLY*FTLALV
Trigger: AACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAG...GGAATCCAAGGAGGAGACCCCAGGCACAGAGTGGGAGAAGGTGGCCCAGCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510734.5
CDS CCA 90 bp TCAGCGATCCGGTTGTTGATCTTGTTCTTCTCTACTTGTTCACTCTaGCGCTGGTTCCACTCCTCCAGGTCCTTCTTGGCCTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SAIRLLILFFSTCSL*RWFHSSRSFLAFSR
Trigger: GCGGGAGAAGGCCAAGAAGGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGATCGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CAA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGTGCTCCTCTCGCCACTaGCGGATGCTCTCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRCSSRH*RMLSGS
Trigger: GGAGCCTGAGAGCATCCGCAAGTGGCGAGAGGAGCA...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS-3UTR CAA 90 bp CTGTGGGTAGCAGCTGCTGCGAGTCTCCACCCCGACCAAAGCAGCTGCTCCTCCATCCGGTTGTTGATCTaGTTCTTCTCTACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: LWVAAAASLHPDQSSCSSIRLLI*FFSTCS
Trigger: TGAACAAGTAGAGAAGAACAAGATCAACAACCGGAT...GGAGGAGCAGCTGCTTTGGTCGGGGTGGAGACTCGCAGCAGCTGCTACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CAA 90 bp ATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGGGCAGGCGGGACACATCTTaGCACTGCTTGCTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: IHQEGQSQLSRLRGGVRGRRDTS*HCLLLL
Trigger: CAAGAGCAGCAAGCAGTGCAAAGATGTGTCCCGCCT...GCCCCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS CCA 90 bp CACGAAAGCCTCCTCGGATGCCACGTAGCCGATGATATCAGCATCTaGCTGCTGGTAGAATGCTTTGTCAGCGATCCGGTTGTTGATCTT +
Preference number: 5 (lower is better)
Translates to: HESLLGCHVADDISI*LLVECFVSDPVVDL
Trigger: AAGATCAACAACCGGATCGCTGACAAAGCATTCTACCAGCAGCCAGATGCTGATATCATCGGCTACGTGGCATCCGAGGAGGCTTTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS-3UTR CAA 90 bp AAAATACATCAGGAGGGACAGTCACAATTGAGTAGACTGAGAGGAGGCGTGAGGTGCAGCATCCAGCTCTaGCAGCCGTTTCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KIHQEGQSQLSRLRGGVRCSIQL*QPFPLL
Trigger: GAGCAGAGGAAACGGCTGCAAGAGCTGGATGCTGCA...CCTCACGCCTCCTCTCAGTCTACTCAATTGTGACTGTCCCTCCTGATGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310418.9
ENST00000345807.7
CDS CAA 90 bp GCTGTCACCCGAGCCGCGGGGGAGCCGGCGTCGGCGGGGACGGGCTaGGCGCGGACCGCACTTCCTCTCCGCCACCGGGCCCGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: AVTRAAGEPASAGTG*ARTALPLRHRARLA
Trigger: AGCCAGCCGGGCCCGGTGGCGGAGAGGAAGTGCGGTCCGCGCCAAGCCCGTCCCCGCCGACGCCGGCTCCCCCGCGGCTCGGGTGACAGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310418.9
ENST00000345807.7
ENST00000502877.1
ENST00000510734.5
CDS CCA 72 bp GCACGGGACGAGCGCTGGACACTCCATCAGAGGGGCTaGGCTTTACATCCCCCTTCTGCCACTCACTGGACT +
Preference number: 6 (lower is better)
Translates to: ARDERWTLHQRG*ALHPPSATHWT
Trigger: AGTCCAGTGAGTGGCAGAAGGGGGATGTAAAGCCCAGCCCCTCTGATGGAGTGTCCAGCGCTCGTCCCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 72 bp GGCTGTATTGGCAACTGGGTTTGTAGCTGGACCCGCTaGTGGTGCACGGGCTCAGCCTCCCACTGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: GCIGNWVCSWTR*WCTGSASHCWD
Trigger: ATCCCAGCAGTGGGAGGCTGAGCCCGTGCACCACCAGCGGGTCCAGCTACAAACCCAGTTGCCAATACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509319.1
CDS CCA 72 bp TTGTGGGCAGGCTCGTCCTTAGGCTGTATTGGCAACTaGGTTTGTAGCTGGACCCGCTGGTGGTGCACGGGC +
Preference number: 6 (lower is better)
Translates to: LWAGSSLGCIGN*VCSWTRWWCTG
Trigger: GCCCGTGCACCACCAGCGGGTCCAGCTACAAACCCAGTTGCCAATACAGCCTAAGGACGAGCCTGCCCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509319.1
ENST00000510734.5
CDS CCA 72 bp CCACCTTCTCCCACTCTGTGCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCTCCTCGGATGCCACGT +
Preference number: 6 (lower is better)
Translates to: PPSPTLCLGSPP*IPSRKPPRMPR
Trigger: ACGTGGCATCCGAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAGGCACAGAGTGGGAGAAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS CCA 72 bp TGTATTGGCAACTGGGTTTGTAGCTGGACCCGCTGGTaGTGCACGGGCTCAGCCTCCCACTGCTGGGATTAC +
Preference number: 6 (lower is better)
Translates to: CIGNWVCSWTRW*CTGSASHCWDY
Trigger: GTAATCCCAGCAGTGGGAGGCTGAGCCCGTGCACCACCAGCGGGTCCAGCTACAAACCCAGTTGCCAATACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509319.1
CDS GCA 72 bp ACTCCATCAGAGGGGCTGGGCTTTACATCCCCCTTCTaGCACTCACTGGACTCGCGACCTTTGAGAAGTCCC +
Preference number: 6 (lower is better)
Translates to: TPSEGLGFTSPF*HSLDSRPLRSP
Trigger: GGGACTTCTCAAAGGTCGCGAGTCCAGTGAGTGGCAGAAGGGGGATGTAAAGCCCAGCCCCTCTGATGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 72 bp CCACCTTCTCCCACTCTGTGCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCGTTTCCTCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: PPSPTLCLGSPP*IPSRKPFPLLL
Trigger: GAGGAGCAGAGGAAACGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAGGCACAGAGTGGGAGAAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508425.5
CDS TCA 72 bp CATCCCCCTTCTGCCACTCACTGGACTCGCGACCTTTaGGAAGTCCCTTCCCTGGGCAGCTTGGCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: HPPSATHWTRDL*EVPSLGSLAFK
Trigger: TTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAGTCCAGTGAGTGGCAGAAGGGGGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 72 bp CAAATGAATAAACAAGTAGCTGGGTACACAGGGGCGTaGAGGGCACGGGACGAGCGCTGGACACTCCATCAG +
Preference number: 6 (lower is better)
Translates to: QMNKQVAGYTGA*RARDERWTLHQ
Trigger: CTGATGGAGTGTCCAGCGCTCGTCCCGTGCCCTCCACGCCCCTGTGTACCCAGCTACTTGTTTATTCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CAA 72 bp ACATCCCCCTTCTGCCACTCACTGGACTCGCGACCTTaGAGAAGTCCCTTCCCTGGGCAGCTTGGCTTTCAA +
Preference number: 6 (lower is better)
Translates to: TSPFCHSLDSRP*RSPFPGQLGFQ
Trigger: TTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAGTCCAGTGAGTGGCAGAAGGGGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS TCA 72 bp AGAAGTCCCTTCCCTGGGCAGCTTGGCTTTCAAACCTaGGCATCTCAGTGGGGAGATCAGTCATGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: RSPFPGQLGFQT*ASQWGDQSWPG
Trigger: TCCTGGCCATGACTGATCTCCCCACTGAGATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 72 bp CCACCTTCTCCCACTCTGTGCCTGGGGTCTCCTCCTTaGATTCCTTCACGAAAGCCTCCTGAAACACATCTC +
Preference number: 6 (lower is better)
Translates to: PPSPTLCLGSPP*IPSRKPPETHL
Trigger: GAGATGTGTTTCAGGAGGCTTTCGTGAAGGAATCCAAGGAGGAGACCCCAGGCACAGAGTGGGAGAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502877.1
CDS CCA 72 bp CTCGCGACCTTTGAGAAGTCCCTTCCCTGGGCAGCTTaGCTTTCAAACCTGAGCATCTCAGTGGGGAGATCA +
Preference number: 6 (lower is better)
Translates to: LATFEKSLPWAA*LSNLSISVGRS
Trigger: TGATCTCCCCACTGAGATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 72 bp CTCACTGGACTCGCGACCTTTGAGAAGTCCCTTCCCTaGGCAGCTTGGCTTTCAAACCTGAGCATCTCAGTG +
Preference number: 6 (lower is better)
Translates to: LTGLATFEKSLP*AAWLSNLSISV
Trigger: CACTGAGATGCTCAGGTTTGAAAGCCAAGCTGCCCAGGGAAGGGACTTCTCAAAGGTCGCGAGTCCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507821.1
CDS CCA 72 bp CTCCTCGGATGCCACGTAGCCGATGATATCAGCATCTaGCTGCTGGTAGAATGCTTTGTCAGCGATCCGGTT +
Preference number: 6 (lower is better)
Translates to: LLGCHVADDISI*LLVECFVSDPV
Trigger: AACCGGATCGCTGACAAAGCATTCTACCAGCAGCCAGATGCTGATATCATCGGCTACGTGGCATCCGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS TCA 72 bp ATTCCTTCACGAAAGCCTCCTGAAACACATCTCCATTaGCTGTGGTCCCCATGTCCTCAGAACCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: IPSRKPPETHLH*LWSPCPQNQPH
Trigger: GTGGGGCTGGTTCTGAGGACATGGGGACCACAGTCAATGGAGATGTGTTTCAGGAGGCTTTCGTGAAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502877.1
CDS CAA 72 bp GTCAGCGATCCGGTTGTTGATCTTGTTCTTCTCTACTaGTTCACTCTGGCGCTGGTTCCACTCCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: VSDPVVDLVLLY*FTLALVPLLQV
Trigger: GACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGATCGCTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS CAA 90 bp GAATGCTTTGTCAGCGATCCGGTTGTTGATCTTGTTCTTCTCTACTaGTTCACTCTGGCGCTGGTTCCACTCCTCCAGGTCCTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: ECFVSDPVVDLVLLY*FTLALVPLLQVLLG
Trigger: GCCAAGAAGGACCTGGAGGAGTGGAACCAGCGCCAGAGTGAACAAGTAGAGAAGAACAAGATCAACAACCGGATCGCTGACAAAGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310418.9
CDS GCA 72 bp GTAGCCGATGATATCAGCATCTGGCTGCTGGTAGAATaGTTTGTCAGCGATCCGGTTGTTGATCTTGTTCTT +
Preference number: 6 (lower is better)
Translates to: VADDISIWLLVE*FVSDPVVDLVL
Trigger: AAGAACAAGATCAACAACCGGATCGCTGACAAAGCATTCTACCAGCAGCCAGATGCTGATATCATCGGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310418.9