RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLSTN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158258

Ensembl transcript IDs: ENST00000458420.7, ENST00000511524.1

Found 867 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGACTGTCCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATaGCTCCTGGGCCCTGTGGTTCTGTTTGCTGAGTGCCCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: VTVLVVLSWGSACVE*LLGPVVLFAECPWQ
Trigger: CTGCCAGGGGCACTCAGCAAACAGAACCACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGGACAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp ACTTCTCACATGTTCCCAGGTGATGCAGCTGGCCCAGGGAACCACTaGTCCTCAGCACCAAATGTAAGCCCTCAGCAGGTCTCGTGGAGG +
Preference number: 1 (lower is better)
Translates to: TSHMFPGDAAGPGNH*SSAPNVSPQQVSWR
Trigger: CCTCCACGAGACCTGCTGAGGGCTTACATTTGGTGCTGAGGAGCAGTGGTTCCCTGGGCCAGCTGCATCACCTGGGAACATGTGAGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp AACATGAGCAGACCTCTTCTGAATCCCACACATCAGCCATGCTCTTaGAGCCATGTAGAGGAGCTGGAGGTGGGTGGGCGTGGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: NMSRPLLNPTHQPCS*SHVEELEVGGRGLQ
Trigger: CTGGAGCCCACGCCCACCCACCTCCAGCTCCTCTACATGGCTGCAAGAGCATGGCTGATGTGTGGGATTCAGAAGAGGTCTGCTCATGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TTCAGCTCTGATGTTGGGCCTCAGGAGGGCTCCCTTGCATCAGTCTaGCTTGTGCCTTTTGAGACTTGGCTCCTGCTGGCCCCTCTACCT +
Preference number: 1 (lower is better)
Translates to: FSSDVGPQEGSLASV*LVPFETWLLLAPLP
Trigger: AGGTAGAGGGGCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAGGCCCAACATCAGAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TGCTCCTCAGCACCAAATGTAAGCCCTCAGCAGGTCTCGTGGAGGTaGGCCCTCCTTAGATCTTCAGCTCTGATGTTGGGCCTCAGGAGG +
Preference number: 1 (lower is better)
Translates to: CSSAPNVSPQQVSWR*ALLRSSALMLGLRR
Trigger: CCTCCTGAGGCCCAACATCAGAGCTGAAGATCTAAGGAGGGCCCACCTCCACGAGACCTGCTGAGGGCTTACATTTGGTGCTGAGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp CACATCATTCAACTGCATGTTCTCATGGGGGCGGGGTCCTGCCTCTaGGGAGGTGTTGCCTCAATGGTCCAGAGGTACCAGCTCCCTTCT +
Preference number: 1 (lower is better)
Translates to: HIIQLHVLMGAGSCL*GGVASMVQRYQLPS
Trigger: AGAAGGGAGCTGGTACCTCTGGACCATTGAGGCAACACCTCCCCAGAGGCAGGACCCCGCCCCCATGAGAACATGCAGTTGAATGATGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TCTGGGGTGGGGCCCAAGAATATGCACTTCTCACATGTTCCCAGGTaGTGCAGCTGGCCCAGGGAACCACTGCTCCTCAGCACCAAATGT +
Preference number: 1 (lower is better)
Translates to: SGVGPKNMHFSHVPR*CSWPREPLLLSTKC
Trigger: ACATTTGGTGCTGAGGAGCAGTGGTTCCCTGGGCCAGCTGCATCACCTGGGAACATGTGAGAAGTGCATATTCTTGGGCCCCACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TGCTCAGCTTACAGAAACCTGGCAGGTGGCCTTCCTGGGGATGAGTaGCCTCATGGCAGCCTCTCCTGGGCAGTCTCTCTCTCTAGGATA +
Preference number: 1 (lower is better)
Translates to: CSAYRNLAGGLPGDE*PHGSLSWAVSLSRI
Trigger: TATCCTAGAGAGAGAGACTGCCCAGGAGAGGCTGCCATGAGGTCACTCATCCCCAGGAAGGCCACCTGCCAGGTTTCTGTAAGCTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAACACAGGGAGTaGCCAAGGCTTAAAGGGTGGGCTCCAGGAAGCTGGAGAAGGCCT +
Preference number: 1 (lower is better)
Translates to: HAGLLGTSPWMKHRE*PRLKGWAPGSWRRP
Trigger: AGGCCTTCTCCAGCTTCCTGGAGCCCACCCTTTAAGCCTTGGGCACTCCCTGTGTTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CTAGTGAACATGAGCAGACCTCTTCTGAATCCCACACATCAGCCATaGTCTTGCAGCCATGTAGAGGAGCTGGAGGTGGGTGGGCGTGGG +
Preference number: 1 (lower is better)
Translates to: LVNMSRPLLNPTHQP*SCSHVEELEVGGRG
Trigger: CCCACGCCCACCCACCTCCAGCTCCTCTACATGGCTGCAAGAGCATGGCTGATGTGTGGGATTCAGAAGAGGTCTGCTCATGTTCACTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp CCCTCCTTGTATGAAGCAACCTGGAGTCAGCATAGGAGAACCTACTaGTCTGTGTGGAGGAGACGCACAGTGAGTTGGAACCCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: PSLYEATWSQHRRTY*SVWRRRTVSWNPRA
Trigger: GGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCCACACAGACCAGTAGGTTCTCCTATGCTGACTCCAGGTTGCTTCATACAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp AACCACTGCTCCTCAGCACCAAATGTAAGCCCTCAGCAGGTCTCGTaGAGGTGGGCCCTCCTTAGATCTTCAGCTCTGATGTTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: NHCSSAPNVSPQQVS*RWALLRSSALMLGL
Trigger: GAGGCCCAACATCAGAGCTGAAGATCTAAGGAGGGCCCACCTCCACGAGACCTGCTGAGGGCTTACATTTGGTGCTGAGGAGCAGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GCTGGAGGTGGGTGGGCGTGGGCTCCAGATGTGAGTGTTCTATATTaGCCAGGATGGATGCACTTTTGCCACCAAGGGTGGATGAGCCTT +
Preference number: 1 (lower is better)
Translates to: AGGGWAWAPDVSVLY*PGWMHFCHQGWMSL
Trigger: AAGGCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACTCACATCTGGAGCCCACGCCCACCCACCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATaGAACACAGGGAGTGCCCAAGGCTTAAAGGGTGGGCTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: SSLMAMLGFLELPHG*NTGSAQGLKGGLQE
Trigger: TTCCTGGAGCCCACCCTTTAAGCCTTGGGCACTCCCTGTGTTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp AGCCATGTAGAGGAGCTGGAGGTGGGTGGGCGTGGGCTCCAGATGTaGGTGTTCTATATTGGCCAGGATGGATGCACTTTTGCCACCAAG +
Preference number: 1 (lower is better)
Translates to: SHVEELEVGGRGLQM*VFYIGQDGCTFATK
Trigger: CTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACTCACATCTGGAGCCCACGCCCACCCACCTCCAGCTCCTCTACATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp GGCAGGCAGGCAGGAATTGTCTCATGCCCAAGGGCAGGTGAAGGATaGGGACTAGGACCAAGGTTCCTTGAAACCACTGCTTCAGTGAGT +
Preference number: 1 (lower is better)
Translates to: GRQAGIVSCPRAGEG*GLGPRFLETTASVS
Trigger: ACTCACTGAAGCAGTGGTTTCAAGGAACCTTGGTCCTAGTCCGCATCCTTCACCTGCCCTTGGGCATGAGACAATTCCTGCCTGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TATGAAGCAACCTGGAGTCAGCATAGGAGAACCTACTGGTCTGTGTaGAGGAGACGCACAGTGAGTTGGAACCCCAGGGCCTTGGGGACT +
Preference number: 1 (lower is better)
Translates to: YEATWSQHRRTYWSV*RRRTVSWNPRALGT
Trigger: AGTCCCCAAGGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCCACACAGACCAGTAGGTTCTCCTATGCTGACTCCAGGTTGCTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TGTGTCCTTGTTGTCCTTGTTGTGACTGTCCTTGTTGTGTTGTCCTaGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGGTTCTG +
Preference number: 1 (lower is better)
Translates to: CVLVVLVVTVLVVLS*GSACVECLLGPVVL
Trigger: CAGAACCACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGGACAGTCACAACAAGGACAACAAGGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp ATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGACATaGGCCTGCATCTGCCTGGCTGCCAACATCTCAGTTAGAGGTCAT +
Preference number: 1 (lower is better)
Translates to: MNWAVAKPVSSSSWT*ACICLAANISVRGH
Trigger: ATGACCTCTAACTGAGATGTTGGCAGCCAGGCAGATGCAGGCTCATGTCCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp CATGACCCACAGGCACAAGCAAGGCCCTCCTCACAGAGGCCCTTATaGATCCTTCTGAAGAGGAGATGCTACCTCCTCATCCCTTTGCCT +
Preference number: 1 (lower is better)
Translates to: HDPQAQARPSSQRPL*ILLKRRCYLLIPLP
Trigger: AGGCAAAGGGATGAGGAGGTAGCATCTCCTCTTCAGAAGGATTCATAAGGGCCTCTGTGAGGAGGGCCTTGCTTGTGCCTGTGGGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp ACCACAAAGGGACATCCCAACAGCTCACAGGCCAAGAGCTCCTCATaGTCAGGGAAACATGCCTTGTTCATCCTCCCTTCCCCTGTTGCT +
Preference number: 1 (lower is better)
Translates to: TTKGHPNSSQAKSSS*SGKHALFILPSPVA
Trigger: AGCAACAGGGGAAGGGAGGATGAACAAGGCATGTTTCCCTGACCATGAGGAGCTCTTGGCCTGTGAGCTGTTGGGATGTCCCTTTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GCACAAGGCTGGGTCATTAACAAATTAGGGTTTTCTCTCCTCAGTTaGGATGCTGCCCATGACCTCGACGGTGGAGCAAGCAGGCCTCAC +
Preference number: 1 (lower is better)
Translates to: AQGWVINKLGFSLLS*DAAHDLDGGASRPH
Trigger: GTGAGGCCTGCTTGCTCCACCGTCGAGGTCATGGGCAGCATCCCAACTGAGGAGAGAAAACCCTAATTTGTTAATGACCCAGCCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp CCCGTCTTGTTCTCATCCATGGTGAGGAAGAGGGTGTTGCGAAGATaGCCAATGCCTGCCAACCCAGCGGATTCATTCAAGTGCCTGATC +
Preference number: 1 (lower is better)
Translates to: PVLFSSMVRKRVLRR*PMPANPADSFKCLI
Trigger: GATCAGGCACTTGAATGAATCCGCTGGGTTGGCAGGCATTGGTCATCTTCGCAACACCCTCTTCCTCACCATGGATGAGAACAAGACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CTGCAGTTTCAGTGTTTCTCCACAAAATATGGCCCTCGAAGAGGCTaGTCAGCTTACAGAAACCTGGCAGGTGGCCTTCCTGGGGATGAG +
Preference number: 1 (lower is better)
Translates to: LQFQCFSTKYGPRRG*SAYRNLAGGLPGDE
Trigger: CTCATCCCCAGGAAGGCCACCTGCCAGGTTTCTGTAAGCTGAGCAGCCTCTTCGAGGGCCATATTTTGTGGAGAAACACTGAAACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GCAGCTTGCTTTCTCCTGAGGTGGAAGGCTAACTTCCATGGTGTATaGTACGGGTTGCCAAACTTTGGCCTTGGGCCAAATCTAGCTGGC +
Preference number: 1 (lower is better)
Translates to: AACFLLRWKANFHGV*YGLPNFGLGPNLAG
Trigger: GCCAGCTAGATTTGGCCCAAGGCCAAAGTTTGGCAACCCGTACCATACACCATGGAAGTTAGCCTTCCACCTCAGGAGAAAGCAAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GTGACCAGGGTCACTGCTGCAGTTTCAGTGTTTCTCCACAAAATATaGCCCTCGAAGAGGCTGCTCAGCTTACAGAAACCTGGCAGGTGG +
Preference number: 1 (lower is better)
Translates to: VTRVTAAVSVFLHKI*PSKRLLSLQKPGRW
Trigger: CCACCTGCCAGGTTTCTGTAAGCTGAGCAGCCTCTTCGAGGGCCATATTTTGTGGAGAAACACTGAAACTGCAGCAGTGACCCTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GCCTCAGTGATGCATATCAGGGCCCCTAGAATTACACCTGTCATCTaGCTTAGGGTGGGTAGCTGTCAAAGCAAGTTACCCTGCCTCCCT +
Preference number: 1 (lower is better)
Translates to: ASVMHIRAPRITPVI*LRVGSCQSKLPCLP
Trigger: AGGGAGGCAGGGTAACTTGCTTTGACAGCTACCCACCCTAAGTCAGATGACAGGTGTAATTCTAGGGGCCCTGATATGCATCACTGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp ATACAGAGCAATGCTTTGGCATCTGGGGGAGGGGGTTGTTCCTGGTaGTGTCACTTGTACCCACTCTCCTGTTTCCTCTCCAACTATGAG +
Preference number: 1 (lower is better)
Translates to: IQSNALASGGGGCSW*CHLYPLSCFLSNYE
Trigger: CTCATAGTTGGAGAGGAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TTGGAGATCTATACTAGTCTCACATGGCCACGTTTTCCAAGGTCCTaGCCAGGCACCACATCATTCAACTGCATGTTCTCATGGGGGCGG +
Preference number: 1 (lower is better)
Translates to: LEIYTSLTWPRFPRS*PGTTSFNCMFSWGR
Trigger: CCGCCCCCATGAGAACATGCAGTTGAATGATGTGGTGCCTGGCCAGGACCTTGGAAAACGTGGCCATGTGAGACTAGTATAGATCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp ACCTCCTGCCCACCCTGTCCAGCTCAGGACATCAACAACCCTTTATaGAAACCACCGAGGTCAGACTGGATGCAGTCAGTTGGATTGATT +
Preference number: 1 (lower is better)
Translates to: TSCPPCPAQDINNPL*KPPRSDWMQSVGLI
Trigger: AATCAATCCAACTGACTGCATCCAGTCTGACCTCGGTGGTTTCCATAAAGGGTTGTTGATGTCCTGAGCTGGACAGGGTGGGCAGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp CTGGCACAGGGCCTGACCCATCACAAGTGCCCAGTGAAGGTCTGCTaGATTACACTGAACATAGCTGCAAACACAGACTCCCATCTGTTT +
Preference number: 1 (lower is better)
Translates to: LAQGLTHHKCPVKVC*ITLNIAANTDSHLF
Trigger: AAACAGATGGGAGTCTGTGTTTGCAGCTATGTTCAGTGTAATTCAGCAGACCTTCACTGGGCACTTGTGATGGGTCAGGCCCTGTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp AAGTTACCCTGCCTCCCTAACACTAAACTTCTGTCCCCAAAGTCCTaGCTGCTCGTGCACAGCTTCCAACACCACAAAGGGACATCCCAA +
Preference number: 1 (lower is better)
Translates to: KLPCLPNTKLLSPKS*LLVHSFQHHKGTSQ
Trigger: TTGGGATGTCCCTTTGTGGTGTTGGAAGCTGTGCACGAGCAGTCAGGACTTTGGGGACAGAAGTTTAGTGTTAGGGAGGCAGGGTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GTCTTTGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTaGGCAGGAGAGAATCTGGGTTCTTCAGAACTCAACAGATGGTGC +
Preference number: 1 (lower is better)
Translates to: VFGPFRRTLKRLLRL*AGENLGSSELNRWC
Trigger: GCACCATCTGTTGAGTTCTGAAGAACCCAGATTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GCAAACTTGGATGCATCTTTAGATACAGAGCAATGCTTTGGCATCTaGGGGAGGGGGTTGTTCCTGGTGCTGTCACTTGTACCCACTCTC +
Preference number: 1 (lower is better)
Translates to: ANLDASLDTEQCFGI*GRGLFLVLSLVPTL
Trigger: GAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTATCTAAAGATGCATCCAAGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GGAAGCTGGAGAAGGCCTTCCCAGACATGTCACAGACATCAGAGGTaGGGTATGATAGACATGGGCATACACTGGGTCAGGGTTTACAAA +
Preference number: 1 (lower is better)
Translates to: GSWRRPSQTCHRHQR*GMIDMGIHWVRVYK
Trigger: TTTGTAAACCCTGACCCAGTGTATGCCCATGTCTATCATACCTCACCTCTGATGTCTGTGACATGTCTGGGAAGGCCTTCTCCAGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp GGCAAAGACTACTGGGTAGTTGGTGAGAGGCTTATGAGAGCAGCTTaGTTTCTCCTGAGGTGGAAGGCTAACTTCCATGGTGTATGGTAC +
Preference number: 1 (lower is better)
Translates to: GKDYWVVGERLMRAA*FLLRWKANFHGVWY
Trigger: GTACCATACACCATGGAAGTTAGCCTTCCACCTCAGGAGAAAGCAAGCTGCTCTCATAAGCCTCTCACCAACTACCCAGTAGTCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CATACAGGCTGTGTAGAAAGCAGCTCTCCTAGTGACCAGGGTCACTaGTGCAGTTTCAGTGTTTCTCCACAAAATATGGCCCTCGAAGAG +
Preference number: 1 (lower is better)
Translates to: HTGCVESSSPSDQGH*CSFSVSPQNMALEE
Trigger: CTCTTCGAGGGCCATATTTTGTGGAGAAACACTGAAACTGCAGCAGTGACCCTGGTCACTAGGAGAGCTGCTTTCTACACAGCCTGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp CCACATTACCCTGCTCACCTGGATACCTCCCAAAGCTTCTGTTACTaGGATATAACCACTCCCGTCTTGTTCTCATCCATGGTGAGGAAG +
Preference number: 1 (lower is better)
Translates to: PHYPAHLDTSQSFCY*DITTPVLFSSMVRK
Trigger: CTTCCTCACCATGGATGAGAACAAGACGGGAGTGGTTATATCCCAGTAACAGAAGCTTTGGGAGGTATCCAGGTGAGCAGGGTAATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp ACTGTCCTTGTTGTGTGTTGTGTTGTGTCCTTGTTGTCCTTGTTGTaGCTGTCCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAAT +
Preference number: 1 (lower is better)
Translates to: TVLVVCCVVSLLSLL*LSLLCCPGAVPVWN
Trigger: ATTCCACACAGGCACTGCCCCAGGACAACACAACAAGGACAGTCACAACAAGGACAACAAGGACACAACACAACACACAACAAGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp CTAACAGCTCTCTCAACTATGAATAAGGCAGCCACCCAGAGAGCATaGGGAACACCTTCCCTACCCAACCAGATCGAAAAGACTGAGCAA +
Preference number: 1 (lower is better)
Translates to: LTALSTMNKAATQRA*GTPSLPNQIEKTEQ
Trigger: TTGCTCAGTCTTTTCGATCTGGTTGGGTAGGGAAGGTGTTCCTCATGCTCTCTGGGTGGCTGCCTTATTCATAGTTGAGAGAGCTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GGAAATATTGCCTACTTCCCTGGAGAGCTCCTCAGTCTGCCTCAGTaGTGCATATCAGGGCCCCTAGAATTACACCTGTCATCTGACTTA +
Preference number: 1 (lower is better)
Translates to: GNIAYFPGELLSLPQ*CISGPLELHLSSDL
Trigger: TAAGTCAGATGACAGGTGTAATTCTAGGGGCCCTGATATGCATCACTGAGGCAGACTGAGGAGCTCTCCAGGGAAGTAGGCAATATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GAGGAGACTGTACCTCGTAGGAGGAGTCAGTTAGGTGTACACGACTaGCAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCA +
Preference number: 1 (lower is better)
Translates to: EETVPRRRSQLGVHD*QSTSKFLSKVCGPS
Trigger: TGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAGTCGTGTACACCTAACTGACTCCTCCTACGAGGTACAGTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp TTTCTTGGGATCAGAATATCTGGGGGAGGGCAAGCCACATTACCCTaGTCACCTGGATACCTCCCAAAGCTTCTGTTACTGGGATATAAC +
Preference number: 1 (lower is better)
Translates to: FLGIRISGGGQATLP*SPGYLPKLLLLGYN
Trigger: GTTATATCCCAGTAACAGAAGCTTTGGGAGGTATCCAGGTGAGCAGGGTAATGTGGCTTGCCCTCCCCCAGATATTCTGATCCCAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CCATCCATTCCCCAAGCAATTCAGTGTTTGAATTGTGATGCTGCATaGCCCAGTCTCATTACAAACAAACAGAGCAGTGCTGCGGCAACC +
Preference number: 1 (lower is better)
Translates to: PSIPQAIQCLNCDAA*PSLITNKQSSAAAT
Trigger: GGTTGCCGCAGCACTGCTCTGTTTGTTTGTAATGAGACTGGGGCATGCAGCATCACAATTCAAACACTGAATTGCTTGGGGAATGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GTAGTTGGTGAGAGGCTTATGAGAGCAGCTTGCTTTCTCCTGAGGTaGAAGGCTAACTTCCATGGTGTATGGTACGGGTTGCCAAACTTT +
Preference number: 1 (lower is better)
Translates to: VVGERLMRAACFLLR*KANFHGVWYGLPNF
Trigger: AAAGTTTGGCAACCCGTACCATACACCATGGAAGTTAGCCTTCCACCTCAGGAGAAAGCAAGCTGCTCTCATAAGCCTCTCACCAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TGCATATCAGGGCCCCTAGAATTACACCTGTCATCTGACTTAGGGTaGGTAGCTGTCAAAGCAAGTTACCCTGCCTCCCTAACACTAAAC +
Preference number: 1 (lower is better)
Translates to: CISGPLELHLSSDLG*VAVKASYPASLTLN
Trigger: GTTTAGTGTTAGGGAGGCAGGGTAACTTGCTTTGACAGCTACCCACCCTAAGTCAGATGACAGGTGTAATTCTAGGGGCCCTGATATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TTCTATATTGGCCAGGATGGATGCACTTTTGCCACCAAGGGTGGATaGGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGC +
Preference number: 1 (lower is better)
Translates to: FYIGQDGCTFATKGG*AFILTSMTHRHKQG
Trigger: GCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GCCTGTGCCAAACCAATTGGTGTGAGCTTGAGGAGGAGTGAAGGATaGGGACAGAGCATACACATTGATGACAAAGAGGAATCAGACATT +
Preference number: 1 (lower is better)
Translates to: ACAKPIGVSLRRSEG*GQSIHIDDKEESDI
Trigger: AATGTCTGATTCCTCTTTGTCATCAATGTGTATGCTCTGTCCCCATCCTTCACTCCTCCTCAAGCTCACACCAATTGGTTTGGCACAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TGCCCTTCCAAGGAAGGCCATCCATTCCCCAAGCAATTCAGTGTTTaGATTGTGATGCTGCATGCCCCAGTCTCATTACAAACAAACAGA +
Preference number: 1 (lower is better)
Translates to: CPSKEGHPFPKQFSV*IVMLHAPVSLQTNR
Trigger: TCTGTTTGTTTGTAATGAGACTGGGGCATGCAGCATCACAATTCAAACACTGAATTGCTTGGGGAATGGATGGCCTTCCTTGGAAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp TCCTGTTTTCTCCCACGTGCATCACAAATGTTGTCCTCTGTTCACTaGACTTCCACCCTCGTCGATCTGATTTTACAAAGGACCTTGACT +
Preference number: 1 (lower is better)
Translates to: SCFLPRASQMLSSVH*TSTLVDLILQRTLT
Trigger: AGTCAAGGTCCTTTGTAAAATCAGATCGACGAGGGTGGAAGTGCAGTGAACAGAGGACAACATTTGTGATGCACGTGGGAGAAAACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp ATGGGGGATCAGACCCTGCTTGTGGCCAAGGACCTATTCTTGGTTTaGGACTTTTCTTATAAGCTTATATGGCCTCAGAAAGAAGCAAGG +
Preference number: 1 (lower is better)
Translates to: MGDQTLLVAKDLFLV*DFSYKLIWPQKEAR
Trigger: CCTTGCTTCTTTCTGAGGCCATATAAGCTTATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGGCCACAAGCAGGGTCTGATCCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp ACTATGGCACTTTTTCCTGTTGTTCAGTTTGGAGGCAAAGACTACTaGGTAGTTGGTGAGAGGCTTATGAGAGCAGCTTGCTTTCTCCTG +
Preference number: 1 (lower is better)
Translates to: TMALFPVVQFGGKDY*VVGERLMRAACFLL
Trigger: CAGGAGAAAGCAAGCTGCTCTCATAAGCCTCTCACCAACTACCCAGTAGTCTTTGCCTCCAAACTGAACAACAGGAAAAAGTGCCATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp AGTGTTCTATATTGGCCAGGATGGATGCACTTTTGCCACCAAGGGTaGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCA +
Preference number: 1 (lower is better)
Translates to: SVLYWPGWMHFCHQG*MSLYINIHDPQAQA
Trigger: TGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GACCTCATTAGCATTTCCATCTGCTTTCTGGCTCTAGGCTTGTTGTaGCTGTCCTTGTTGTGTGTTGTGTTGTGTCCTTGTTGTCCTTGT +
Preference number: 1 (lower is better)
Translates to: DLISISICFLALGLL*LSLLCVVLCPCCPC
Trigger: ACAAGGACAACAAGGACACAACACAACACACAACAAGGACAGTCACAACAAGCCTAGAGCCAGAAAGCAGATGGAAATGCTAATGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp GTAGGATGCTTAGCACATAGTAGGTTTGCAGCAGTGTCTGTTAGGTaGATACCTATGAACATAAGTAGAATCCTGCACCAGGAGTGGAAG +
Preference number: 1 (lower is better)
Translates to: VGCLAHSRFAAVSVR*IPMNISRILHQEWK
Trigger: CTTCCACTCCTGGTGCAGGATTCTACTTATGTTCATAGGTATGCACCTAACAGACACTGCTGCAAACCTACTATGTGCTAAGCATCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp TTTGTTGTCACCACTGTTTCTCTGCAAATGAGTCCACCAACCAAATaGTTCCTCAAATTATTCATCTTTGCTGCCCTAGCCATGGGCCAC +
Preference number: 1 (lower is better)
Translates to: FVVTTVSLQMSPPTK*FLKLFIFAALAMGH
Trigger: GTGGCCCATGGCTAGGGCAGCAAAGATGAATAATTTGAGGAAGCATTTGGTTGGTGGACTCATTTGCAGAGAAACAGTGGTGACAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp TCACAAGTGCCCAGTGAAGGTCTGCTGAATTACACTGAACATAGCTaGAAACACAGACTCCCATCTGTTTACTACCTGCATACAGGGAAT +
Preference number: 1 (lower is better)
Translates to: SQVPSEGLLNYTEHS*KHRLPSVYYLHTGN
Trigger: ATTCCCTGTATGCAGGTAGTAAACAGATGGGAGTCTGTGTTTGCAGCTATGTTCAGTGTAATTCAGCAGACCTTCACTGGGCACTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TGCACCAGGAGTGGAAGTTGGGGAGACTGGTCTTGTCTATACTTTTaGATGACTCTGAACAAGACATTGAATCACGAAGCCTCAGTTTAC +
Preference number: 1 (lower is better)
Translates to: CTRSGSWGDWSCLYF*MTLNKTLNHEASVY
Trigger: GTAAACTGAGGCTTCGTGATTCAATGTCTTGTTCAGAGTCATTCAAAAGTATAGACAAGACCAGTCTCCCCAACTTCCACTCCTGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp ACCACCGAGGTCAGACTGGATGCAGTCAGTTGGATTGATTCATCATaGCTAGTTCAATTAAGAGCTGATCACCTTCAAACAGCTCTGACT +
Preference number: 1 (lower is better)
Translates to: TTEVRLDAVSWIDSS*LVQLRADHLQTALT
Trigger: AGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTGAACTAGTCATGATGAATCAATCCAACTGACTGCATCCAGTCTGACCTCGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CATGTTCTCAGAGCTTCGTGGAAATTCTGTCAAGGCCCTAATTCTTaGCTGCTATTCTCTTGGCCACAAAAGATCACAGACCAGTTACTA +
Preference number: 1 (lower is better)
Translates to: HVLRASWKFCQGPNS*LLFSWPQKITDQLL
Trigger: TAGTAACTGGTCTGTGATCTTTTGTGGCCAAGAGAATAGCAGGCAAGAATTAGGGCCTTGACAGAATTTCCACGAAGCTCTGAGAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp AAGAGGGAGTGTGGCTGGATGCATTTCTCTGTGGCTCATTCAATTTaGGGTATACTCATACTACTGAGTCTCTATGAAGGAGTGATAAGC +
Preference number: 1 (lower is better)
Translates to: KRECGWMHFSVAHSI*GILILLSLYEGVIS
Trigger: GCTTATCACTCCTTCATAGAGACTCAGTAGTATGAGTATACCCCAAATTGAATGAGCCACAGAGAAATGCATCCAGCCACACTCCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp TTCTCAGAGCTTCGTGGAAATTCTGTCAAGGCCCTAATTCTTGCCTaGTATTCTCTTGGCCACAAAAGATCACAGACCAGTTACTATAGA +
Preference number: 1 (lower is better)
Translates to: FSELRGNSVKALILA*YSLGHKRSQTSYYR
Trigger: TCTATAGTAACTGGTCTGTGATCTTTTGTGGCCAAGAGAATAGCAGGCAAGAATTAGGGCCTTGACAGAATTTCCACGAAGCTCTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp GTTAGGTGCATACCTATGAACATAAGTAGAATCCTGCACCAGGAGTaGAAGTTGGGGAGACTGGTCTTGTCTATACTTTTGAATGACTCT +
Preference number: 1 (lower is better)
Translates to: VRCIPMNISRILHQE*KLGRLVLSILLNDS
Trigger: AGAGTCATTCAAAAGTATAGACAAGACCAGTCTCCCCAACTTCCACTCCTGGTGCAGGATTCTACTTATGTTCATAGGTATGCACCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp CTTAATTCTTCAAACCCAGTCCCTTCACTGAGGTCAAGTGATCTCTaGGATTCAATTCAATTCAACATTTGTGGCACACATGTCATGGGC +
Preference number: 1 (lower is better)
Translates to: LNSSNPVPSLRSSDL*DSIQFNICGTHVMG
Trigger: GCCCATGACATGTGTGCCACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGACTGGGTTTGAAGAATTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GAGAGCATGAGGAACACCTTCCCTACCCAACCAGATCGAAAAGACTaGGCAAAGAGAAAAGTGTTCTCACAAACACCAGACTTAAATATT +
Preference number: 1 (lower is better)
Translates to: ESMRNTFPTQPDRKD*AKRKVFSQTPDLNI
Trigger: AATATTTAAGTCTGGTGTTTGTGAGAACACTTTTCTCTTTGCTCAGTCTTTTCGATCTGGTTGGGTAGGGAAGGTGTTCCTCATGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp AAAGAGGAATCAGACATTCGAAACAAACATGTTCTCAGAGCTTCGTaGAAATTCTGTCAAGGCCCTAATTCTTGCCTGCTATTCTCTTGG +
Preference number: 1 (lower is better)
Translates to: KEESDIRNKHVLRAS*KFCQGPNSCLLFSW
Trigger: CCAAGAGAATAGCAGGCAAGAATTAGGGCCTTGACAGAATTTCCACGAAGCTCTGAGAACATGTTTGTTTCGAATGTCTGATTCCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp CTCAGTAACCAGGCAATCACCTCGATCCAAGGCTTTCAACTCTCGTaGAATATCTGTCAGTTTGTCAGTTCAGCAAATAACAAGTGTTTT +
Preference number: 1 (lower is better)
Translates to: LSNQAITSIQGFQLS*NICQFVSSANNKCF
Trigger: AAAACACTTGTTATTTGCTGAACTGACAAACTGACAGATATTCCACGAGAGTTGAAAGCCTTGGATCGAGGTGATTGCCTGGTTACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 90 bp CTGATATTGAGCCATAGAGCCAAGAAGATTGCTAATTTCGAAGTGTaGTTGGTCGGGCTTTCTACTGATGATGTTGCTATTGATTCAAAC +
Preference number: 1 (lower is better)
Translates to: LILSHRAKKIANFEV*LVGLSTDDVAIDSN
Trigger: GTTTGAATCAATAGCAACATCATCAGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGCAATCTTCTTGGCTCTATGGCTCAATATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp TTCATGTTGATGAATCTGCTCTGCAGTAAATCTGATGAAAGGAACTaGAGAGCAGCACAAGGCTGGGTCATTAACAAATTAGGGTTTTCT +
Preference number: 1 (lower is better)
Translates to: FMLMNLLCSKSDERN*RAAQGWVINKLGFS
Trigger: AGAAAACCCTAATTTGTTAATGACCCAGCCTTGTGCTGCTCTCCAGTTCCTTTCATCAGATTTACTGCAGAGCAGATTCATCAACATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp CTTGTGGATGTACAGACACAGCCTAATAGAAAAGGGCTATTTGGTTaGGAGAATTCCCAGGAGAAATATCTGTTTCCATCCAATGAATAT +
Preference number: 1 (lower is better)
Translates to: LVDVQTQPNRKGLFG*ENSQEKYLFPSNEY
Trigger: ATATTCATTGGATGGAAACAGATATTTCTCCTGGGAATTCTCCCAACCAAATAGCCCTTTTCTATTAGGCTGTGTCTGTACATCCACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TATGAGTCACATTTTCCCTCAATATCTCCTATCTTACTTTTTGAGTaGTCAGCCCTGACTTTCAAGTCTAAATTTCTCCTCCACGCCAAA +
Preference number: 1 (lower is better)
Translates to: YESHFPSISPILLFE*SALTFKSKFLLHAK
Trigger: TTTGGCGTGGAGGAGAAATTTAGACTTGAAAGTCAGGGCTGATCACTCAAAAAGTAAGATAGGAGATATTGAGGGAAAATGTGACTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp TGTGGCTCATTCAATTTGGGGTATACTCATACTACTGAGTCTCTATaGAGGAGTGATAAGCTGGGTCTTCAATTTCCAAATGTTTACCAA +
Preference number: 1 (lower is better)
Translates to: CGSFNLGYTHTTESL*RSDKLGLQFPNVYQ
Trigger: TTGGTAAACATTTGGAAATTGAAGACCCAGCTTATCACTCCTTCATAGAGACTCAGTAGTATGAGTATACCCCAAATTGAATGAGCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 90 bp ATTTTGGCTCTTCTCAAGTCTGTTGCCCTCTTTTCATTAGTCTACTaGGAATTGAACTTCATGTTGATGAATCTGCTCTGCAGTAAATCT +
Preference number: 1 (lower is better)
Translates to: ILALLKSVALFSLVY*ELNFMLMNLLCSKS
Trigger: AGATTTACTGCAGAGCAGATTCATCAACATGAAGTTCAATTCCCAGTAGACTAATGAAAAGAGGGCAACAGACTTGAGAAGAGCCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GATAAAAGCAAACAGACATTAAAGCTAACACGTTTCTGTTGTCTGTaGTTAATACACACTGTCTGCATTTTGGCTCTTCTCAAGTCTGTT +
Preference number: 1 (lower is better)
Translates to: DKSKQTLKLTRFCCL*LIHTVCILALLKSV
Trigger: AACAGACTTGAGAAGAGCCAAAATGCAGACAGTGTGTATTAATCACAGACAACAGAAACGTGTTAGCTTTAATGTCTGTTTGCTTTTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 90 bp GTTTTCAGATATATTTGCCCTCTATCTAAAGTGTTCCTCCTTTTATaGGCAGAAGAAAGAAGAAGCTGCAATGATTGCAAATATGCTTCT +
Preference number: 1 (lower is better)
Translates to: VFRYICPLSKVFLLL*AEERRSCNDCKYAS
Trigger: AGAAGCATATTTGCAATCATTGCAGCTTCTTCTTTCTTCTGCTCATAAAAGGAGGAACACTTTAGATAGAGGGCAAATATATCTGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp GCTCTGATGTTGGGCCTCAGGAGGGCTCCCTTGCATCAGTCTGGCTaGTGCCTTTTGAGACTTGGCTCCTGCTGGCCCCTCTACCTGCAT +
Preference number: 2 (lower is better)
Translates to: ALMLGLRRAPLHQSG*CLLRLGSCWPLYLH
Trigger: ATGCAGGTAGAGGGGCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAGGCCCAACATCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGAGGAGACGCACAGTaGGTTGGAACCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGGDAQ*VGTPGP
Trigger: AGGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp AGCTGGAGGTGGGTGGGCGTGGGCTCCAGATGTGAGTGTTCTATATaGGCCAGGATGGATGCACTTTTGCCACCAAGGGTGGATGAGCCT +
Preference number: 2 (lower is better)
Translates to: SWRWVGVGSRCECSI*ARMDALLPPRVDEP
Trigger: AGGCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACTCACATCTGGAGCCCACGCCCACCCACCTCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTATGAAACACAGGGAGTaGCCAAGGCTTAAAGGGTGG +
Preference number: 2 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCMKHRE*PRLKGW
Trigger: CCACCCTTTAAGCCTTGGGCACTCCCTGTGTTTCAT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGTTCTGTTTGCTGAGTaGCCCTGGCAGGGTAGCTGC +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWVLFAE*PWQGSC
Trigger: GCAGCTACCCTGCCAGGGGCACTCAGCAAACAGAAC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGCCATGGGTCCTCCCTaGGTGGAGGTCAGACTAGAG +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREAMGPP*VEVRLE
Trigger: CTCTAGTCTGACCTCCACCCAGGGAGGACCCATGGC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGATGGGGGCTGGGGGTaGTTTGCTTTGGCACCCTCA +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREDGGWG*FALAPS
Trigger: TGAGGGTGCCAAAGCAAACCACCCCCAGCCCCCATC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp CTCCTTAGATCTTCAGCTCTGATGTTGGGCCTCAGGAGGGCTCCCTaGCATCAGTCTGGCTTGTGCCTTTTGAGACTTGGCTCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LLRSSALMLGLRRAP*HQSGLCLLRLGSCW
Trigger: CCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAGGCCCAACATCAGAGCTGAAGATCTAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAAGTTCCTCCTGGACATaGGCCTGCATCTGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRESSSWT*ACICLA
Trigger: AGCCAGGCAGATGCAGGCTCATGTCCAGGAGGAACT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGCAACGTCCTTAAATaGCCCCCTCCACACTCTGCC +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGNVLK*PPPHSA
Trigger: GGCAGAGTGTGGAGGGGGTCATTTAAGGACGTTGCC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp TTGTGTTGTGTCCTTGTTGTCCTTGTTGTGACTGTCCTTGTTGTGTaGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LCCVLVVLVVTVLVV*SWGSACVECLLGPV
Trigger: CACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGGACAGTCACAACAAGGACAACAAGGACACAACACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp CAAAGCCCAGGGCCCTGGCCCTCTGACTCTCCATCTCAAAACCCCTaGTATGAGGAGACTGTACCTCGTAGGAGGAGTCAGTTAGGTGTA +
Preference number: 2 (lower is better)
Translates to: QSPGPWPSDSPSQNP*YEETVPRRRSQLGV
Trigger: TACACCTAACTGACTCCTCCTACGAGGTACAGTCTCCTCATACAAGGGGTTTTGAGATGGAGAGTCAGAGGGCCAGGGCCCTGGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGCCACCCAGAGAGCATaGGGAACACCTTCCCTACCC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSATQRA*GTPSLP
Trigger: GGGTAGGGAAGGTGTTCCTCATGCTCTCTGGGTGGC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATGGGGGATCAGACCCTaGTTGTGGCCAAGGACCTAT +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREWGIRP*LWPRTY
Trigger: ATAGGTCCTTGGCCACAAGCAGGGTCTGATCCCCCA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGGCAGGGTAGCTGCATaGTTGCAGCAGGTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGGRVAA*LQQVPR
Trigger: TCTGGGCACCTGCTGCAACCATGCAGCTACCCTGCC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAACTCCCTGGGATGGAATaGAGCCTGGCTCTTAATCCA +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRELPGME*SLALNP
Trigger: TGGATTAAGAGCCAGGCTTCATTCCATCCCAGGGAG...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCCTGGCAGGGTAGCTaGATGGTTGCAGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPWQGS*MVAAGA
Trigger: GGCACCTGCTGCAACCATGCAGCTACCCTGCCAGGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTCTGGTAGCTCCTCCTaGCGGGGAAAAGGACCCTCA +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSSGSSS*RGKGPS
Trigger: TGAGGGTCCTTTTCCCCGGCAGGAGGAGCTACCAGA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCCATGCTGGGCTTCTTaGAACTTCCCCATGGATGAA +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWPCWAS*NFPMDE
Trigger: TTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGATCAGACCCTGCTTGTaGCCAAGGACCTATTCTTGG +
Preference number: 2 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKIRPCL*PRTYSW
Trigger: CCAAGAATAGGTCCTTGGCCACAAGCAGGGTCTGAT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGATGGAATGAAGCCTaGCTCTTAATCCACAGCCCC +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGWNEA*LLIHSP
Trigger: GGGGCTGTGGATTAAGAGCCAGGCTTCATTCCATCC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGCCCAGGATGGGGGCTaGGGGTGGTTTGCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQAQDGG*GWFALA
Trigger: TGCCAAAGCAAACCACCCCCAGCCCCCATCCTGGGC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp GCATCTTTAGATACAGAGCAATGCTTTGGCATCTGGGGGAGGGGGTaGTTCCTGGTGCTGTCACTTGTACCCACTCTCCTGTTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: ASLDTEQCFGIWGRG*FLVLSLVPTLLFPL
Trigger: GAGAGGAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTATCTAAAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAAAAGTTGAAAAGACCTaGCATGGGTCCTCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREKVEKT*HGSSLG
Trigger: ACCCAGGGAGGACCCATGGCAGGTCTTTTCAACTTT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAAGATGACCAATGCCTaGCAACCCAGCGGATTCATT +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWKMTNA*QPSGFI
Trigger: AATGAATCCGCTGGGTTGGCAGGCATTGGTCATCTT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGAGAGCTCCTCAGTCTaGCTCAGTGATGCATATCAG +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREESSSV*LSDAYQ
Trigger: CTGATATGCATCACTGAGGCAGACTGAGGAGCTCTC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTGAGACTTGGCTCCTaGTGGCCCCTCTACCTGCAT +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLRLGS*WPLYLH
Trigger: ATGCAGGTAGAGGGGCCAGCAGGAGCCAAGTCTCAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATGTCATGGGCCAGGTaGAGTGCTAGGCTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQMSWAR*SARLPW
Trigger: CCACGGGAGCCTAGCACTGCACCTGGCCCATGACAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAACTGTGCCAAACCAATTaGTGTGAGCTTGAGGAGGAG +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRELCQTN*CELEEE
Trigger: CTCCTCCTCAAGCTCACACCAATTGGTTTGGCACAG...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAACCCCAGCTTCTTCTaGTGTTTTTCCCTGAGAAGG +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWNPSFF*CFSLRR
Trigger: CCTTCTCAGGGAAAAACACCAGAAGAAGCTGGGGTT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCCTCAGCAGGTCTCGTaGAGGTGGGCCCTCCTTAGA +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQPQQVS*RWALLR
Trigger: TCTAAGGAGGGCCCACCTCCACGAGACCTGCTGAGG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCACTCTGCCAGGCCCTaGGTGTCTCCACCAGCATAC +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQHSARP*VSPPAY
Trigger: GTATGCTGGTGGAGACACCCAGGGCCTGGCAGAGTG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGCCCTAATTCTTGCCTaGTATTCTCTTGGCCACAAA +
Preference number: 2 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKALILA*YSLGHK
Trigger: TTTGTGGCCAAGAGAATAGCAGGCAAGAATTAGGGC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAATTATTCATCTTTGCTaGCCTAGCCATGGGCCACCT +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREIIHLC*PSHGPP
Trigger: AGGTGGCCCATGGCTAGGGCAGCAAAGATGAATAAT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCAAGCCACATTACCCTaGTCACCTGGATACCTCCCA +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSQATLP*SPGYLP
Trigger: TGGGAGGTATCCAGGTGAGCAGGGTAATGTGGCTTG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAGTCCTGACTGCTCGTaGACAGCTTCCAACACCACA +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGSPDCS*TASNTT
Trigger: TGTGGTGTTGGAAGCTGTGCACGAGCAGTCAGGACT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCATAGGAGAACCTACTaGTCTGTGTGGAGGAGACGC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSHRRTY*SVWRRR
Trigger: GCGTCTCCTCCACACAGACCAGTAGGTTCTCCTATG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTGGGCTGAGCTGTGCTaGGAAGGCACTGAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFWAELC*EGTEPW
Trigger: CCAAGGCTCAGTGCCTTCCCAGCACAGCTCAGCCCA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp AACATCTCAGTTAGAGGTCATAGGGTGTCTAGGCCTTCAGGGGTTTaGGTTCCTGGATGCCAGCATATGGAGGGTGGAAAATGCCAGACT +
Preference number: 2 (lower is better)
Translates to: NISVRGHRVSRPSGV*VPGCQHMEGGKCQT
Trigger: AGTCTGGCATTTTCCACCCTCCATATGCTGGCATCCAGGAACCAAAACCCCTGAAGGCCTAGACACCCTATGACCTCTAACTGAGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp TGTAGCCTATTTTCAAGCTCAGGAAGGCAGAATCTGGTTGTCCACTaGGCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGC +
Preference number: 2 (lower is better)
Translates to: CSLFSSSGRQNLVVH*ARQAMNWAVAKPVS
Trigger: GCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGCCAAGTGGACAACCAGATTCTGCCTTCCTGAGCTTGAAAATAGGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp AATGCTTTGGCATCTGGGGGAGGGGGTTGTTCCTGGTGCTGTCACTaGTACCCACTCTCCTGTTTCCTCTCCAACTATGAGTCACATTTT +
Preference number: 2 (lower is better)
Translates to: NALASGGGGCSWCCH*YPLSCFLSNYESHF
Trigger: AAAATGTGACTCATAGTTGGAGAGGAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCATAAGGCTGAGTGGTaGGAGCCTTGCCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQHKAEW*EPCQPQ
Trigger: CTGAGGTTGGCAAGGCTCTCACCACTCAGCCTTATG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCCAGATCGAAAAGACTaGGCAAAGAGAAAAGTGTTC +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWPDRKD*AKRKVF
Trigger: GAACACTTTTCTCTTTGCTCAGTCTTTTCGATCTGG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCCCCAAAGTCCTGACTaGTCGTGCACAGCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQPQSPD*SCTASN
Trigger: GTTGGAAGCTGTGCACGAGCAGTCAGGACTTTGGGG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCATCAGTCTGGCTTGTaGCTTTTGAGACTTGGCTCC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSHQSGL*LLRLGS
Trigger: GGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATGCCTGCTATTCTCTTaGCCACAAAAGATCACAGAC +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRECLLFS*PQKITD
Trigger: GTCTGTGATCTTTTGTGGCCAAGAGAATAGCAGGCA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATCCTGCACCAGGAGTaGAAGTTGGGGAGACTGGTC +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQILHQE*KLGRLV
Trigger: GACCAGTCTCCCCAACTTCCACTCCTGGTGCAGGAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAAAGGGCTATTTGGTTaGGAGAATTCCCAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWKGLFG*ENSQEK
Trigger: TTTCTCCTGGGAATTCTCCCAACCAAATAGCCCTTT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTTGCTGCCACAATTTTaGGAGAATTCAGTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWLLPQF*ENSVAP
Trigger: AGGAGCAACTGAATTCTCCCAAAATTGTGGCAGCAA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCAGACAAGCAATGAACTaGGCTGTGGCCAAACCAGTC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSRQAMN*AVAKPV
Trigger: GACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCT...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAATAATCTCATTACCTTaGAGGCCAAGGTGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREIISLP*RPRWAD
Trigger: ATCTGCCCACCTTGGCCTCCAAGGTAATGAGATTAT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp GTTCACTGCACTTCCACCCTCGTCGATCTGATTTTACAAAGGACCTaGACTCACAAACCGAGAAGGAAGTTGGAGGAGGCTTTCTCCACT +
Preference number: 2 (lower is better)
Translates to: VHCTSTLVDLILQRT*THKPRRKLEEAFST
Trigger: AGTGGAGAAAGCCTCCTCCAACTTCCTTCTCGGTTTGTGAGTCAAGGTCCTTTGTAAAATCAGATCGACGAGGGTGGAAGTGCAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGACCACCCTCCTTGTATaGAGCAACCTGGAGTCAGCA +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQTTLLV*SNLESA
Trigger: TGCTGACTCCAGGTTGCTTCATACAAGGAGGGTGGT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCAGCTTGCTTTCTCCTaGGGTGGAAGGCTAACTTCC +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFQLAFS*GGRLTS
Trigger: GGAAGTTAGCCTTCCACCTCAGGAGAAAGCAAGCTG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTGCGAAGATGACCAATaGCTGCCAACCCAGCGGATT +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQCEDDQ*LPTQRI
Trigger: AATCCGCTGGGTTGGCAGGCATTGGTCATCTTCGCA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCTGCCAGAGTACATTaGAGAAGGCTTTGGGGATCC +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPARVH*RRLWGS
Trigger: GGATCCCCAAAGCCTTCTGCAATGTACTCTGGCAGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAGGGCAGGTGAAGGATaGGGACTAGGACCAAGGTTC +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFRAGEG*GLGPRF
Trigger: GAACCTTGGTCCTAGTCCGCATCCTTCACCTGCCCT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGCAGGAATTGTCTCATaGCCAAGGGCAGGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQAGIVS*PRAGEG
Trigger: TCCTTCACCTGCCCTTGGGCATGAGACAATTCCTGC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTTTCTCCACAAAATATaGCCCTCGAAGAGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSFLHKI*PSKRLL
Trigger: GAGCAGCCTCTTCGAGGGCCATATTTTGTGGAGAAA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCACAGACATCAGAGGTaGGGTATGATAGACATGGGC +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFHRHQR*GMIDMG
Trigger: GCCCATGTCTATCATACCTCACCTCTGATGTCTGTG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCTGTTTCTCTGCAAATaGGTCCACCAACCAAATGCT +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLFLCK*VHQPNA
Trigger: AGCATTTGGTTGGTGGACTCATTTGCAGAGAAACAG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCAGCTCTGTGCCTGTaGCAAACCAATTGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPALCL*QTNWCE
Trigger: CTCACACCAATTGGTTTGGCACAGGCACAGAGCTGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGCGGATTCATTCAAGTaGCTGATCTTTGTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSADSFK*LIFVAD
Trigger: GTCAGCTACAAAGATCAGGCACTTGAATGAATCCGC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGTTTTGGTTCCTGGATaGCAGCATATGGAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFVLVPG*QHMEGG
Trigger: TCCACCCTCCATATGCTGGCATCCAGGAACCAAAAC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCTTGGAACTTCCCCATaGATGAAACACAGGGAGTGC +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLGTSP*MKHREC
Trigger: GCACTCCCTGTGTTTCATCCATGGGGAAGTTCCAAG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTGTATGAAGCAACCTaGAGTCAGCATAGGAGAACC +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLYEAT*SQHRRT
Trigger: GGTTCTCCTATGCTGACTCCAGGTTGCTTCATACAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCTTGTTGTGTTGTCCTaGGGCAGTGCCTGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFLVVLS*GSACVE
Trigger: TTCCACACAGGCACTGCCCCAGGACAACACAACAAG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCTGGATGCCAGCATATaGAGGGTGGAAAATGCCAGA +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQLDASI*RVENAR
Trigger: TCTGGCATTTTCCACCCTCCATATGCTGGCATCCAG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTCTGCACACAAAATGTaGGCTCATTTCTCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: WMSLYINIHDPQAQARPSSAHKM*AHFSGS
Trigger: GCTACCAGAGAAATGAGCCCACATTTTGTGTGCAGA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGAGATCATTATGGGCTaGGCTGTGCTGGGAAGGCAC +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICEIIMG*AVLGRH
Trigger: GTGCCTTCCCAGCACAGCTCAGCCCATAATGATCTC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATCACAAGTGCCCAGTaGAGGTCTGCTGAATTACAC +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQITSAQ*RSAELH
Trigger: GTGTAATTCAGCAGACCTTCACTGGGCACTTGTGAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAGACTGCTGAGGCTGTaGGCAGGAGAGAATCTGGGT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICRLLRL*AGENLG
Trigger: ACCCAGATTCTCTCCTGCTCACAGCCTCAGCAGTCT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTTGGGCCTTGGCTGTaGTTACAGCATTTGATCAAA +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGFGPWL*LQHLIK
Trigger: TTTGATCAAATGCTGTAAGCACAGCCAAGGCCCAAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTACACTGAACATAGCTaGAAACACAGACTCCCATCT +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGYTEHS*KHRLPS
Trigger: AGATGGGAGTCTGTGTTTGCAGCTATGTTCAGTGTA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCAACCATGTTATTTCTaGCCAGTGGGCAGGGTAACT +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFQPCYF*PVGRVT
Trigger: AGTTACCCTGCCCACTGGGCAGAAATAACATGGTTG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAACAACTCATTCTGCACTaGGATTTAAGCATTTCAATC +
Preference number: 2 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREQLILH*DLSISI
Trigger: GATTGAAATGCTTAAATCCCAGTGCAGAATGAGTTG...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCCCCAGCTCTCTCACTaGATGGTCCATGTATACAAA +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQPQLSH*MVHVYK
Trigger: TTTGTATACATGGACCATCCAGTGAGAGAGCTGGGG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGAAGGCACTGAGCCTTaGGGGGCTAACACTTGCCTC +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLEGTEP*GANTCL
Trigger: GAGGCAAGTGTTAGCCCCCCAAGGCTCAGTGCCTTC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCATGGCAGCCTCTCCTaGGCAGTCTCTCTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLHGSLS*AVSLSR
Trigger: CCTAGAGAGAGAGACTGCCCAGGAGAGGCTGCCATG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGAGGTGTTGCCTCAATaGTCCAGAGGTACCAGCTCC +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICEVLPQ*SRGTSS
Trigger: GGAGCTGGTACCTCTGGACCATTGAGGCAACACCTC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAAGACCTTACGTGTGTaGAGTTCAACCACCCTCCTT +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFKTLRV*SSTTLL
Trigger: AAGGAGGGTGGTTGAACTTCACACACGTAAGGTCTT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCTGACATGCAGAGAATaGCCTCTTATAGCCAGAGTT +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLTCRE*PLIARV
Trigger: AACTCTGGCTATAAGAGGTCATTCTCTGCATGTCAG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCTGAGATCAGGAGTTTaGGACCAGCCTGGCCAACAC +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLRSGV*DQPGQH
Trigger: GTGTTGGCCAGGCTGGTCTCAAACTCCTGATCTCAG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAGGAATGGGGGACATTaGTTCTCACCACCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLRNGGH*FSPPPA
Trigger: AGCTGGGGGTGGTGAGAAGCAATGTCCCCCATTCCT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAACTTAGGGCAGAAGTaGAGGCTACAGGACAAAGTC +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFNLGQK*RLQDKV
Trigger: GACTTTGTCCTGTAGCCTCCACTTCTGCCCTAAGTT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAGGAGGAGTGAAGGATaGGGACAGAGCATACACATT +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFRRSEG*GQSIHI
Trigger: AATGTGTATGCTCTGTCCCCATCCTTCACTCCTCCT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCAAAGCTTCTGTTACTaGGATATAACCACTCCCGTC +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQQSFCY*DITTPV
Trigger: GACGGGAGTGGTTATATCCCAGTAACAGAAGCTTTG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGCCAAGAGCTCCTCATaGTCAGGGAAACATGCCTTG +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICAKSSS*SGKHAL
Trigger: CAAGGCATGTTTCCCTGACCATGAGGAGCTCTTGGC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTATTGCCTACTTCCCTaGAGAGCTCCTCAGTCTGCC +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICYCLLP*RAPQSA
Trigger: GGCAGACTGAGGAGCTCTCCAGGGAAGTAGGCAATA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp GTGGTTTGCTTTGGCACCCTCACTGCACTAGTCATTGATTTTACCTaGTTAGTTAATAGTCAGTTCTTCCCGATGCCAGCTCAAGTCATC +
Preference number: 2 (lower is better)
Translates to: VVCFGTLTALVIDFT*LVNSQFFPMPAQVI
Trigger: GATGACTTGAGCTGGCATCGGGAAGAACTGACTATTAACTAACAAGGTAAAATCAATGACTAGTGCAGTGAGGGTGCCAAAGCAAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGAACTTCCCCATGGATaGAACACAGGGAGTGCCCAA +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLELPHG*NTGSAQ
Trigger: TTGGGCACTCCCTGTGTTTCATCCATGGGGAAGTTC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCAGCTCTCTCAACTATaGATAAGGCAGCCACCCAGA +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICQLSQL*IRQPPR
Trigger: TCTGGGTGGCTGCCTTATTCATAGTTGAGAGAGCTG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGGCAAGACAAGCAATaGACTGGGCTGTGGCCAAAC +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLWQDKQ*TGLWPN
Trigger: GTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGCCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTTTTTGGTATCTAGATaGATTTGGGCCTTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFFLVSR*IWALAV
Trigger: CACAGCCAAGGCCCAAATTCATCTAGATACCAAAAA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGTATGGCCTGTGGGCTaGGGAAGGTTTTTATATTTT +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFVWPVG*GRFLYF
Trigger: AAAATATAAAAACCTTCCTCAGCCCACAGGCCATAC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCTACTGGGTAGTTGGTaGGAGGCTTATGAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLLGSW*EAYESS
Trigger: GCTGCTCTCATAAGCCTCTCACCAACTACCCAGTAG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGCTAATTTCGAAGTGTaGTTGGTCGGGCTTTCTACT +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFANFEV*LVGLST
Trigger: AGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGTACCATTCATAGCCTaGCAGAGTACATTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFVPFIA*QSTLQK
Trigger: CTTCTGCAATGTACTCTGGCAGGCTATGAATGGTAC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAATTGTGATGCTGCATaGCCCAGTCTCATTACAAAC +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQNCDAA*PSLITN
Trigger: GTTTGTAATGAGACTGGGGCATGCAGCATCACAATT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAATAAAGACAGGAAATaGGGGTACTGGGGTAGACTT +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFNKDRK*GYWGRL
Trigger: AAGTCTACCCCAGTACCCTCATTTCCTGTCTTTATT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGATAATGAACACTCCTaGTCAGAGATCATTATGGGC +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFDNEHS*SEIIMG
Trigger: GCCCATAATGATCTCTGAGCAGGAGTGTTCATTATC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAATGTCTCATATAGATaGAGAATCCTGTACCATTCA +
Preference number: 2 (lower is better)
Translates to: SLNHRLPASRASHSVGLGNVSYR*RILYHS
Trigger: TGAATGGTACAGGATTCTGCATCTATATGAGACATT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTATTCAGGGAAATATTaGCTACTTCCCTGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFYSGKY*LLPWRA
Trigger: AGCTCTCCAGGGAAGTAGGCAATATTTCCCTGAATA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTTGTCCTCTGTTCACTaGACTTCCACCCTCGTCGAT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLSSVH*TSTLVD
Trigger: ATCGACGAGGGTGGAAGTGCAGTGAACAGAGGACAA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTACAAAAGGGACATGTaGGCCAGGCAGCAGACCCCT +
Preference number: 2 (lower is better)
Translates to: KHSFVVRIVCFHATIGELYKRDM*ARQQTP
Trigger: AGGGGTCTGCTGCCTGGCCCACATGTCCCTTTTGTA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTATTACCCTGCTCACCTaGATACCTCCCAAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICITLLT*IPPKAS
Trigger: AGAAGCTTTGGGAGGTATCCAGGTGAGCAGGGTAAT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGGTTGGTTGAATCCATaGATTTGGAAACCTCAGATA +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFGWLNP*IWKPQI
Trigger: TATCTGAGGTTTCCAAATCCATGGATTCAACCAACC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATTTCCAGGTCCACCTaGCTGCTGTTTATATTTAAG +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQISRST*LLFIFK
Trigger: CTTAAATATAAACAGCAGCCAGGTGGACCTGGAAAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAAACAGGGGTGTCTTTaGGCCATTCAGGAGGACTCT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLKQGCL*AIQEDS
Trigger: AGAGTCCTCCTGAATGGCCCAAAGACACCCCTGTTT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp TGCATACCTATGAACATAAGTAGAATCCTGCACCAGGAGTGGAAGTaGGGGAGACTGGTCTTGTCTATACTTTTGAATGACTCTGAACAA +
Preference number: 2 (lower is better)
Translates to: CIPMNISRILHQEWK*GRLVLSILLNDSEQ
Trigger: TTGTTCAGAGTCATTCAAAAGTATAGACAAGACCAGTCTCCCCAACTTCCACTCCTGGTGCAGGATTCTACTTATGTTCATAGGTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCTCTAGGCTTGTTGTaGCTGTCCTTGTTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLALGLL*LSLLCV
Trigger: AACACACAACAAGGACAGTCACAACAAGCCTAGAGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTACTTGGTGGAGCTCGTaGGTTTCTAATACATGCAGA +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICTWWSS*VSNTCR
Trigger: TCTGCATGTATTAGAAACGCACGAGCTCCACCAAGT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTATTGTCTGTTTTCATaGTACAATAGGAGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFYCLFS*YNRRAE
Trigger: CTCAGCTCTCCTATTGTAGCATGAAAACAGACAATA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGTTCTCAGAGCTTCGTaGAAATTCTGTCAAGGCCCT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLVLRAS*KFCQGP
Trigger: AGGGCCTTGACAGAATTTCCACGAAGCTCTGAGAAC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCCTGTTGTTCAGTTTaGAGGCAAAGACTACTGGGT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSCCSV*RQRLLG
Trigger: ACCCAGTAGTCTTTGCCTCCAAACTGAACAACAGGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTATACTAGTCTCACATaGCCACGTTTTCCAAGGTCC +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICYTSLT*PRFPRS
Trigger: GGACCTTGGAAAACGTGGCCATGTGAGACTAGTATA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp AGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTaGACTGCCTCTTTGGTCACATGGCCAGATTTACCCATAATTTTT +
Preference number: 2 (lower is better)
Translates to: RADHLQTALTLEAID*TASLVTWPDLPIIF
Trigger: AAAAATTATGGGTAAATCTGGCCATGTGACCAAAGAGGCAGTCAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCCTGCTTGATAGGATaGTTGAGTAAATTCAAGAAA +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPCLIG*LSKFKK
Trigger: TTTCTTGAATTTACTCAATCATCCTATCAAGCAGGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAAGCAATTCAGTGTTTaGATTGTGATGCTGCATGCC +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICKQFSV*IVMLHA
Trigger: GGCATGCAGCATCACAATTCAAACACTGAATTGCTT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAACAAAGGCAAACTCTaGAGACAGGTAGTCAGGATG +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLNKGKL*RQVVRM
Trigger: CATCCTGACTACCTGTCTGCAGAGTTTGCCTTTGTT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCAGTTGCTCCTAAATaGCCAACTAAAGATCTTTTT +
Preference number: 2 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSVAPK*PTKDLF
Trigger: AAAAAGATCTTTAGTTGGGCATTTAGGAGCAACTGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTGTGCCAAGGGCTTTTaGTTGTCAGCCTCAATAAAT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICCAKGF*LSASIN
Trigger: ATTTATTGAGGCTGACAAGCAAAAGCCCTTGGCACA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCTTCAAAACTTTCATTaGTCATTTCTTTTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLQNFH*SFLLPA
Trigger: TGCAGGCAAAAGAAATGAGCAATGAAAGTTTTGAAG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCAAGGACCTATTCTTaGTTTGGGACTTTTCTTATA +
Preference number: 2 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPRTYS*FGTFLI
Trigger: TATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGGGCCAAATCTAGCTaGCTGCTAATTTTCGTATGG +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLWAKSS*LLIFVW
Trigger: CCATACGAAAATTAGCAGCCAGCTAGATTTGGCCCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp ATATTGAGCCATAGAGCCAAGAAGATTGCTAATTTCGAAGTGTGCTaGGTCGGGCTTTCTACTGATGATGTTGCTATTGATTCAAACAGT +
Preference number: 2 (lower is better)
Translates to: ILSHRAKKIANFEVC*VGLSTDDVAIDSNS
Trigger: ACTGTTTGAATCAATAGCAACATCATCAGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGCAATCTTCTTGGCTCTATGGCTCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp TTTGCCTGCAGCTGGACAATGGAAAGTGGTTATGTGAAAATTAAATaGTGCCAAGGGCTTTTGCTTGTCAGCCTCAATAAATGTCTCATA +
Preference number: 2 (lower is better)
Translates to: FACSWTMESGYVKIK*CQGLLLVSLNKCLI
Trigger: TATGAGACATTTATTGAGGCTGACAAGCAAAAGCCCTTGGCACAATTTAATTTTCACATAACCACTTTCCATTGTCCAGCTGCAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp TCTGTTGCCCTCTTTTCATTAGTCTACTGGGAATTGAACTTCATGTaGATGAATCTGCTCTGCAGTAAATCTGATGAAAGGAACTGGAGA +
Preference number: 2 (lower is better)
Translates to: SVALFSLVYWELNFM*MNLLCSKSDERNWR
Trigger: TCTCCAGTTCCTTTCATCAGATTTACTGCAGAGCAGATTCATCAACATGAAGTTCAATTCCCAGTAGACTAATGAAAAGAGGGCAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 90 bp GCTCTTCTCAAGTCTGTTGCCCTCTTTTCATTAGTCTACTGGGAATaGAACTTCATGTTGATGAATCTGCTCTGCAGTAAATCTGATGAA +
Preference number: 2 (lower is better)
Translates to: ALLKSVALFSLVYWE*NFMLMNLLCSKSDE
Trigger: TTCATCAGATTTACTGCAGAGCAGATTCATCAACATGAAGTTCAATTCCCAGTAGACTAATGAAAAGAGGGCAACAGACTTGAGAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGAACTGAGTCAGCCTTaGTTGGAATTGAGGAATATT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICELSQP*LELRNI
Trigger: AATATTCCTCAATTCCAATCAAGGCTGACTCAGTTC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGACATGGGCATACACTaGGTCAGGGTTTACAAAAGG +
Preference number: 2 (lower is better)
Translates to: KHSFVVRIVCFHATIGELDMGIH*VRVYKR
Trigger: CCTTTTGTAAACCCTGACCCAGTGTATGCCCATGTC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAAACACTTTAGGAGGTaGGAAAAGCTTCACAAGGTT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICKHFRR*EKLHKV
Trigger: AACCTTGTGAAGCTTTTCCCACCTCCTAAAGTGTTT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGGCTTTCAACTCTCGTaGAATATCTGTCAGTTTGTC +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLGFQLS*NICQFV
Trigger: GACAAACTGACAGATATTCCACGAGAGTTGAAAGCC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTCAATTCAACATTTGTaGCACACATGTCATGGGCCA +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLSIQHL*HTCHGP
Trigger: TGGCCCATGACATGTGTGCCACAAATGTTGAATTGA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCCTCTTTGGTCACATaGCCAGATTTACCCATAATT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLASLVT*PDLPII
Trigger: AATTATGGGTAAATCTGGCCATGTGACCAAAGAGGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCAGTGTCTGTTAGGTaGATACCTATGAACATAAGT +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLAVSVR*IPMNIS
Trigger: ACTTATGTTCATAGGTATGCACCTAACAGACACTGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTGTTTATTTCCCGTCTaGAAATATAATGTAGGGAAG +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICCLFPV*KYNVGK
Trigger: CTTCCCTACATTATATTTGCAGACGGGAAATAAACA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTCTTATAAGCTTATATaGCCTCAGAAAGAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: QLRADHLQTALTLEAIDLSYKLI*PQKEAR
Trigger: CCTTGCTTCTTTCTGAGGCCATATAAGCTTATAAGA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGACCTATTCTTGGTTTaGGACTTTTCTTATAAGCTT +
Preference number: 2 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICDLFLV*DFSYKL
Trigger: AAGCTTATAAGAAAAGTCCCAAACCAAGAATAGGTC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGGGTTTTAAGCATATaGAGTGTTCTTTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: KHSFVVRIVCFHATIGELWVLSI*SVLFAA
Trigger: GGCAGCAAAAAGAACACTTCATATGCTTAAAACCCA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGAAAGGAAGGAACAGATaGAGAAAACACTTTAGGAGG +
Preference number: 2 (lower is better)
Translates to: KHSFVVRIVCFHATIGELKGRNR*RKHFRR
Trigger: CCTCCTAAAGTGTTTTCTGCATCTGTTCCTTCCTTT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGGAAAATGCCAGACTaGTTAATGACACCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: KHSFVVRIVCFHATIGELWKMPD*LMTPFS
Trigger: AGAAAAAGGTGTCATTAATCAGTCTGGCATTTTCCA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp ACCTACTGGTCTGTGTGGAGGAGACGCACAGTGAGTTaGAACCCCAGGGCCTTGGGGACTCTGAGCCTGGGG +
Preference number: 3 (lower is better)
Translates to: TYWSVWRRRTVS*NPRALGTLSLG
Trigger: CCCCAGGCTCAGAGTCCCCAAGGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCCACACAGACCAGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp GGCCTCAGGAGGGCTCCCTTGCATCAGTCTGGCTTGTaGCTTTTGAGACTTGGCTCCTGCTGGCCCCTCTAC +
Preference number: 3 (lower is better)
Translates to: GLRRAPLHQSGL*LLRLGSCWPLY
Trigger: GTAGAGGGGCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GATGTTGGGCCTCAGGAGGGCTCCCTTGCATCAGTCTaGCTTGTGCCTTTTGAGACTTGGCTCCTGCTGGCC +
Preference number: 3 (lower is better)
Translates to: DVGPQEGSLASV*LVPFETWLLLA
Trigger: GGCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAGGCCCAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGCCCTGTGGTTCTGTTaGCTGAGTGCCCCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKALWFC*LSAPGR
Trigger: CCTGCCAGGGGCACTCAGCAAACAGAACCACAGGGC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGGGCTGGGGGTGGTTaGCTTTGGCACCCTCACTGC +
Preference number: 3 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGAGGG*LWHPHC
Trigger: GCAGTGAGGGTGCCAAAGCAAACCACCCCCAGCCCC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp ATTAGGGTTTTCTCTCCTCAGTTGGGATGCTGCCCATaGCCTCGACGGTGGAGCAAGCAGGCCTCACCCAGG +
Preference number: 3 (lower is better)
Translates to: IRVFSPQLGCCP*PRRWSKQASPR
Trigger: CCTGGGTGAGGCCTGCTTGCTCCACCGTCGAGGTCATGGGCAGCATCCCAACTGAGGAGAGAAAACCCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp ATGTTCCCAGGTGATGCAGCTGGCCCAGGGAACCACTaGTCCTCAGCACCAAATGTAAGCCCTCAGCAGGTC +
Preference number: 3 (lower is better)
Translates to: MFPGDAAGPGNH*SSAPNVSPQQV
Trigger: GACCTGCTGAGGGCTTACATTTGGTGCTGAGGAGCAGTGGTTCCCTGGGCCAGCTGCATCACCTGGGAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp ACCTGGAGTCAGCATAGGAGAACCTACTGGTCTGTGTaGAGGAGACGCACAGTGAGTTGGAACCCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: TWSQHRRTYWSV*RRRTVSWNPRA
Trigger: GGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCCACACAGACCAGTAGGTTCTCCTATGCTGACTCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATCTTCAGCTCTGATGTaGGGCCTCAGGAGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRESSALM*GLRRAP
Trigger: GGGAGCCCTCCTGAGGCCCAACATCAGAGCTGAAGA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGCAGGCAGGCAGGAATaGTCTCATGCCCAAGGGCAG +
Preference number: 3 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREAGRQE*SHAQGQ
Trigger: CTGCCCTTGGGCATGAGACAATTCCTGCCTGCCTGC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp GCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGACATaGGCCTGCATCTGCCTGGCTGCCAACATCTCAGTT +
Preference number: 3 (lower is better)
Translates to: AVAKPVSSSSWT*ACICLAANISV
Trigger: AACTGAGATGTTGGCAGCCAGGCAGATGCAGGCTCATGTCCAGGAGGAACTGCTGACTGGTTTGGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GTTGTCCTTGTTGTGACTGTCCTTGTTGTGTTGTCCTaGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: VVLVVTVLVVLS*GSACVECLLGP
Trigger: AGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGGACAGTCACAACAAGGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GCACCAAATGTAAGCCCTCAGCAGGTCTCGTGGAGGTaGGCCCTCCTTAGATCTTCAGCTCTGATGTTGGGC +
Preference number: 3 (lower is better)
Translates to: APNVSPQQVSWR*ALLRSSALMLG
Trigger: GCCCAACATCAGAGCTGAAGATCTAAGGAGGGCCCACCTCCACGAGACCTGCTGAGGGCTTACATTTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GGGTGGGCGTGGGCTCCAGATGTGAGTGTTCTATATTaGCCAGGATGGATGCACTTTTGCCACCAAGGGTGG +
Preference number: 3 (lower is better)
Translates to: GWAWAPDVSVLY*PGWMHFCHQGW
Trigger: CCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACTCACATCTGGAGCCCACGCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp ATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATaGAACACAGGGAGTGCCCAAGGCTTAAAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: MAMLGFLELPHG*NTGSAQGLKGG
Trigger: CCCACCCTTTAAGCCTTGGGCACTCCCTGTGTTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp AATGCTTTGGCATCTGGGGGAGGGGGTTGTTCCTGGTaGTGTCACTTGTACCCACTCTCCTGTTTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: NALASGGGGCSW*CHLYPLSCFLS
Trigger: GGAGAGGAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GGACATCCCAACAGCTCACAGGCCAAGAGCTCCTCATaGTCAGGGAAACATGCCTTGTTCATCCTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: GHPNSSQAKSSS*SGKHALFILPS
Trigger: GGAAGGGAGGATGAACAAGGCATGTTTCCCTGACCATGAGGAGCTCTTGGCCTGTGAGCTGTTGGGATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TCCTCAGCACCAAATGTAAGCCCTCAGCAGGTCTCGTaGAGGTGGGCCCTCCTTAGATCTTCAGCTCTGATG +
Preference number: 3 (lower is better)
Translates to: SSAPNVSPQQVS*RWALLRSSALM
Trigger: CATCAGAGCTGAAGATCTAAGGAGGGCCCACCTCCACGAGACCTGCTGAGGGCTTACATTTGGTGCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp AGCAATGCTTTGGCATCTGGGGGAGGGGGTTGTTCCTaGTGCTGTCACTTGTACCCACTCTCCTGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: SNALASGGGGCS*CCHLYPLSCFL
Trigger: GAGGAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp GCCTACTTCCCTGGAGAGCTCCTCAGTCTGCCTCAGTaGTGCATATCAGGGCCCCTAGAATTACACCTGTCA +
Preference number: 3 (lower is better)
Translates to: AYFPGELLSLPQ*CISGPLELHLS
Trigger: TGACAGGTGTAATTCTAGGGGCCCTGATATGCATCACTGAGGCAGACTGAGGAGCTCTCCAGGGAAGTAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp CAGGCACAAGCAAGGCCCTCCTCACAGAGGCCCTTATaGATCCTTCTGAAGAGGAGATGCTACCTCCTCATC +
Preference number: 3 (lower is better)
Translates to: QAQARPSSQRPL*ILLKRRCYLLI
Trigger: GATGAGGAGGTAGCATCTCCTCTTCAGAAGGATTCATAAGGGCCTCTGTGAGGAGGGCCTTGCTTGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp GCAGGAATTGTCTCATGCCCAAGGGCAGGTGAAGGATaGGGACTAGGACCAAGGTTCCTTGAAACCACTGCT +
Preference number: 3 (lower is better)
Translates to: AGIVSCPRAGEG*GLGPRFLETTA
Trigger: AGCAGTGGTTTCAAGGAACCTTGGTCCTAGTCCGCATCCTTCACCTGCCCTTGGGCATGAGACAATTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp GGTGAGGAAGAGGGTGTTGCGAAGATGACCAATGCCTaGCAACCCAGCGGATTCATTCAAGTGCCTGATCTT +
Preference number: 3 (lower is better)
Translates to: GEEEGVAKMTNA*QPSGFIQVPDL
Trigger: AAGATCAGGCACTTGAATGAATCCGCTGGGTTGGCAGGCATTGGTCATCTTCGCAACACCCTCTTCCTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp CAGTGTTTCTCCACAAAATATGGCCCTCGAAGAGGCTaGTCAGCTTACAGAAACCTGGCAGGTGGCCTTCCT +
Preference number: 3 (lower is better)
Translates to: QCFSTKYGPRRG*SAYRNLAGGLP
Trigger: AGGAAGGCCACCTGCCAGGTTTCTGTAAGCTGAGCAGCCTCTTCGAGGGCCATATTTTGTGGAGAAACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp TGCATGCCCCAGTCTCATTACAAACAAACAGAGCAGTaGTGCGGCAACCTGGCAACGTCCTTAAATGACCCC +
Preference number: 3 (lower is better)
Translates to: CMPQSHYKQTEQ*CGNLATSLNDP
Trigger: GGGGTCATTTAAGGACGTTGCCAGGTTGCCGCAGCACTGCTCTGTTTGTTTGTAATGAGACTGGGGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GGGCCCCTAGAATTACACCTGTCATCTGACTTAGGGTaGGTAGCTGTCAAAGCAAGTTACCCTGCCTCCCTA +
Preference number: 3 (lower is better)
Translates to: GPLELHLSSDLG*VAVKASYPASL
Trigger: TAGGGAGGCAGGGTAACTTGCTTTGACAGCTACCCACCCTAAGTCAGATGACAGGTGTAATTCTAGGGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp CCACCCTGTCCAGCTCAGGACATCAACAACCCTTTATaGAAACCACCGAGGTCAGACTGGATGCAGTCAGTT +
Preference number: 3 (lower is better)
Translates to: PPCPAQDINNPL*KPPRSDWMQSV
Trigger: AACTGACTGCATCCAGTCTGACCTCGGTGGTTTCCATAAAGGGTTGTTGATGTCCTGAGCTGGACAGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTTGCCTGCTATTCTCTaGGCCACAAAAGATCACAGA +
Preference number: 3 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKLPAIL*ATKDHR
Trigger: TCTGTGATCTTTTGTGGCCAAGAGAATAGCAGGCAA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp TTCTCATCCATGGTGAGGAAGAGGGTGTTGCGAAGATaGCCAATGCCTGCCAACCCAGCGGATTCATTCAAG +
Preference number: 3 (lower is better)
Translates to: FSSMVRKRVLRR*PMPANPADSFK
Trigger: CTTGAATGAATCCGCTGGGTTGGCAGGCATTGGTCATCTTCGCAACACCCTCTTCCTCACCATGGATGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp GGCCTGACCCATCACAAGTGCCCAGTGAAGGTCTGCTaGATTACACTGAACATAGCTGCAAACACAGACTCC +
Preference number: 3 (lower is better)
Translates to: GLTHHKCPVKVC*ITLNIAANTDS
Trigger: GGAGTCTGTGTTTGCAGCTATGTTCAGTGTAATTCAGCAGACCTTCACTGGGCACTTGTGATGGGTCAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp GGCCAGGATGGATGCACTTTTGCCACCAAGGGTGGATaGGCCTTTATATTAACATCCATGACCCACAGGCAC +
Preference number: 3 (lower is better)
Translates to: GQDGCTFATKGG*AFILTSMTHRH
Trigger: GTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp ATCAGAATATCTGGGGGAGGGCAAGCCACATTACCCTaGTCACCTGGATACCTCCCAAAGCTTCTGTTACTG +
Preference number: 3 (lower is better)
Translates to: IRISGGGQATLP*SPGYLPKLLLL
Trigger: CAGTAACAGAAGCTTTGGGAGGTATCCAGGTGAGCAGGGTAATGTGGCTTGCCCTCCCCCAGATATTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp ATCAGAAAGTTGAAAAGACCTGCCATGGGTCCTCCCTaGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGT +
Preference number: 3 (lower is better)
Translates to: IRKLKRPAMGPP*VEVRLEDIGSS
Trigger: ACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGGACCCATGGCAGGTCTTTTCAACTTTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GAGAGGCTTATGAGAGCAGCTTGCTTTCTCCTGAGGTaGAAGGCTAACTTCCATGGTGTATGGTACGGGTTG +
Preference number: 3 (lower is better)
Translates to: ERLMRAACFLLR*KANFHGVWYGL
Trigger: CAACCCGTACCATACACCATGGAAGTTAGCCTTCCACCTCAGGAGAAAGCAAGCTGCTCTCATAAGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp ATTCAATTCAATTCAACATTTGTGGCACACATGTCATaGGCCAGGTGCAGTGCTAGGCTCCCGTGGTGCCAC +
Preference number: 3 (lower is better)
Translates to: IQFNSTFVAHMS*ARCSARLPWCH
Trigger: GTGGCACCACGGGAGCCTAGCACTGCACCTGGCCCATGACATGTGTGCCACAAATGTTGAATTGAATTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TGGGTCATTAACAAATTAGGGTTTTCTCTCCTCAGTTaGGATGCTGCCCATGACCTCGACGGTGGAGCAAGC +
Preference number: 3 (lower is better)
Translates to: WVINKLGFSLLS*DAAHDLDGGAS
Trigger: GCTTGCTCCACCGTCGAGGTCATGGGCAGCATCCCAACTGAGGAGAGAAAACCCTAATTTGTTAATGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCACTGTCCTTGTTGTGTaGTCCTGGGGCAGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFTVLVV*SWGSAC
Trigger: ACAGGCACTGCCCCAGGACAACACAACAAGGACAGT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp CCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTaGGCAGGAGAGAATCTGGGTTCTTCAGAACTCAAC +
Preference number: 3 (lower is better)
Translates to: PFRRTLKRLLRL*AGENLGSSELN
Trigger: GTTGAGTTCTGAAGAACCCAGATTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp GTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTaGCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: VCVRKLIKSQTA*LQSFSFSRSGV
Trigger: CACCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TGTGAAGTTCAACCACCCTCCTTGTATGAAGCAACCTaGAGTCAGCATAGGAGAACCTACTGGTCTGTGTGG +
Preference number: 3 (lower is better)
Translates to: CEVQPPSLYEAT*SQHRRTYWSVW
Trigger: CCACACAGACCAGTAGGTTCTCCTATGCTGACTCCAGGTTGCTTCATACAAGGAGGGTGGTTGAACTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TTTCTCCTGAGGTGGAAGGCTAACTTCCATGGTGTATaGTACGGGTTGCCAAACTTTGGCCTTGGGCCAAAT +
Preference number: 3 (lower is better)
Translates to: FLLRWKANFHGV*YGLPNFGLGPN
Trigger: ATTTGGCCCAAGGCCAAAGTTTGGCAACCCGTACCATACACCATGGAAGTTAGCCTTCCACCTCAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TCCTCCTGCCGGGGAAAAGGACCCTCAATACGTGTGTaGGTGTCCCATTTCTGTTCTGAAATGTGCAGTAAA +
Preference number: 3 (lower is better)
Translates to: SSCRGKGPSIRV*VSHFCSEMCSK
Trigger: TTTACTGCACATTTCAGAACAGAAATGGGACACCCACACACGTATTGAGGGTCCTTTTCCCCGGCAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GATGCATCTTTAGATACAGAGCAATGCTTTGGCATCTaGGGGAGGGGGTTGTTCCTGGTGCTGTCACTTGTA +
Preference number: 3 (lower is better)
Translates to: DASLDTEQCFGI*GRGLFLVLSLV
Trigger: TACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTATCTAAAGATGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp AAACTTGGATGCATCTTTAGATACAGAGCAATGCTTTaGCATCTGGGGGAGGGGGTTGTTCCTGGTGCTGTC +
Preference number: 3 (lower is better)
Translates to: KLGCIFRYRAML*HLGEGVVPGAV
Trigger: GACAGCACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTATCTAAAGATGCATCCAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAGGGTAGCTGCATGGTaGCAGCAGGTGCCCAGACAG +
Preference number: 3 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICRVAAW*QQVPRQ
Trigger: CTGTCTGGGCACCTGCTGCAACCATGCAGCTACCCT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGACTTTCATTGTAGACTaGGTGGAGCTCGTGCGTTTC +
Preference number: 3 (lower is better)
Translates to: SLNHRLPASRASHSVGLGTFIVD*VELVRF
Trigger: GAAACGCACGAGCTCCACCAAGTCTACAATGAAAGT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGTTGAATCCATGGATTaGGAAACCTCAGATATGGAG +
Preference number: 3 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREVESMD*ETSDME
Trigger: CTCCATATCTGAGGTTTCCAAATCCATGGATTCAAC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAACTCTCCTTTTCCAGTaGGCACTAAAGGGAAAACTA +
Preference number: 3 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRETLLFQ*ALKGKL
Trigger: TAGTTTTCCCTTTAGTGCCAACTGGAAAAGGAGAGT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATCTACCCCTGCTCCTaGCTTAGGGGCTCCATTTAC +
Preference number: 3 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQIYPCS*LRGSIY
Trigger: GTAAATGGAGCCCCTAAGCAAGGAGCAGGGGTAGAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp AAAGCTTCACAAGGTTGTTCTCATGAATCAGAAAGTTaGAAAGACCTGCCATGGGTCCTCCCTGGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: KASQGCSHESES*KDLPWVLPGWR
Trigger: CCTCCACCCAGGGAGGACCCATGGCAGGTCTTTTCAACTTTCTGATTCATGAGAACAACCTTGTGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp ATGCATATCAGGGCCCCTAGAATTACACCTGTCATCTaGCTTAGGGTGGGTAGCTGTCAAAGCAAGTTACCC +
Preference number: 3 (lower is better)
Translates to: MHIRAPRITPVI*LRVGSCQSKLP
Trigger: GGGTAACTTGCTTTGACAGCTACCCACCCTAAGTCAGATGACAGGTGTAATTCTAGGGGCCCTGATATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp TGTGTAGAAAGCAGCTCTCCTAGTGACCAGGGTCACTaGTGCAGTTTCAGTGTTTCTCCACAAAATATGGCC +
Preference number: 3 (lower is better)
Translates to: CVESSSPSDQGH*CSFSVSPQNMA
Trigger: GGCCATATTTTGTGGAGAAACACTGAAACTGCAGCAGTGACCCTGGTCACTAGGAGAGCTGCTTTCTACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp CTCCCACGTGCATCACAAATGTTGTCCTCTGTTCACTaGACTTCCACCCTCGTCGATCTGATTTTACAAAGG +
Preference number: 3 (lower is better)
Translates to: LPRASQMLSSVH*TSTLVDLILQR
Trigger: CCTTTGTAAAATCAGATCGACGAGGGTGGAAGTGCAGTGAACAGAGGACAACATTTGTGATGCACGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp TTTGCAAACTTGGATGCATCTTTAGATACAGAGCAATaGTTTGGCATCTGGGGGAGGGGGTTGTTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: FANLDASLDTEQ*FGIWGRGLFLV
Trigger: CACCAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTATCTAAAGATGCATCCAAGTTTGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp TTTTCTATACTCACCAACTGGTTTTCTTCAACCTCCTaGCCACCCTGTCCAGCTCAGGACATCAACAACCCT +
Preference number: 3 (lower is better)
Translates to: FSILTNWFSSTS*PPCPAQDINNP
Trigger: AGGGTTGTTGATGTCCTGAGCTGGACAGGGTGGGCAGGAGGTTGAAGAAAACCAGTTGGTGAGTATAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GTCACTGCTGCAGTTTCAGTGTTTCTCCACAAAATATaGCCCTCGAAGAGGCTGCTCAGCTTACAGAAACCT +
Preference number: 3 (lower is better)
Translates to: VTAAVSVFLHKI*PSKRLLSLQKP
Trigger: AGGTTTCTGTAAGCTGAGCAGCCTCTTCGAGGGCCATATTTTGTGGAGAAACACTGAAACTGCAGCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TATACTAGTCTCACATGGCCACGTTTTCCAAGGTCCTaGCCAGGCACCACATCATTCAACTGCATGTTCTCA +
Preference number: 3 (lower is better)
Translates to: YTSLTWPRFPRS*PGTTSFNCMFS
Trigger: TGAGAACATGCAGTTGAATGATGTGGTGCCTGGCCAGGACCTTGGAAAACGTGGCCATGTGAGACTAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTTTGCTGCCACAATTTaGGGAGAATTCAGTTGCTCC +
Preference number: 3 (lower is better)
Translates to: WMSLYINIHDPQAQARPSFAATI*GEFSCS
Trigger: GGAGCAACTGAATTCTCCCAAAATTGTGGCAGCAAA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGTTCAACCACCCTCCTaGTATGAAGCAACCTGGAGT +
Preference number: 3 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFVQPPS*YEATWS
Trigger: ACTCCAGGTTGCTTCATACAAGGAGGGTGGTTGAAC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGTCTTGTCTATACTTTaGAATGACTCTGAACAAGAC +
Preference number: 3 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREVLSIL*NDSEQD
Trigger: GTCTTGTTCAGAGTCATTCAAAAGTATAGACAAGAC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTATAACCACTCCCGTCTaGTTCTCATCCATGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFITTPV*FSSMVR
Trigger: CCTCACCATGGATGAGAACAAGACGGGAGTGGTTAT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCTACCAACTAGCCGGTaGCTTTACTCCACTGAAGCA +
Preference number: 3 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFLPTSR*LYSTEA
Trigger: TGCTTCAGTGGAGTAAAGCAACCGGCTAGTTGGTAG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGGTGTATGGTACGGGTaGCCAAACTTTGGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICGVWYG*PNFGLG
Trigger: CCCAAGGCCAAAGTTTGGCAACCCGTACCATACACC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGCCTGCCAGAGTACATaGCAGAAGGCTTTGGGGATC +
Preference number: 3 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICACQST*QKALGI
Trigger: GATCCCCAAAGCCTTCTGCAATGTACTCTGGCAGGC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGCCAAGGGCTTTTGCTaGTCAGCCTCAATAAATGTC +
Preference number: 3 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQAKGFC*SASINV
Trigger: GACATTTATTGAGGCTGACAAGCAAAAGCCCTTGGC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp GTACCTCGTAGGAGGAGTCAGTTAGGTGTACACGACTaGCAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: VPRRRSQLGVHD*QSTSKFLSKVC
Trigger: ACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAGTCGTGTACACCTAACTGACTCCTCCTACGAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp ATAGCTGCAAACACAGACTCCCATCTGTTTACTACCTaGATACAGGGAATATCTGTCAGCTTTCTGGGGTGC +
Preference number: 3 (lower is better)
Translates to: IAANTDSHLFTT*IQGISVSFLGC
Trigger: GCACCCCAGAAAGCTGACAGATATTCCCTGTATGCAGGTAGTAAACAGATGGGAGTCTGTGTTTGCAGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp GGGATCAGACCCTGCTTGTGGCCAAGGACCTATTCTTaGTTTGGGACTTTTCTTATAAGCTTATATGGCCTC +
Preference number: 3 (lower is better)
Translates to: GIRPCLWPRTYS*FGTFLISLYGL
Trigger: GAGGCCATATAAGCTTATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGGCCACAAGCAGGGTCTGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp CTTTTTCCTGTTGTTCAGTTTGGAGGCAAAGACTACTaGGTAGTTGGTGAGAGGCTTATGAGAGCAGCTTGC +
Preference number: 3 (lower is better)
Translates to: LFPVVQFGGKDY*VVGERLMRAAC
Trigger: GCAAGCTGCTCTCATAAGCCTCTCACCAACTACCCAGTAGTCTTTGCCTCCAAACTGAACAACAGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGGGATCAGACCCTGCTaGTGGCCAAGGACCTATTCT +
Preference number: 3 (lower is better)
Translates to: QLRADHLQTALTLEAIDLGIRPC*WPRTYS
Trigger: AGAATAGGTCCTTGGCCACAAGCAGGGTCTGATCCC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCCAATTGGTGTGAGCTaGAGGAGGAGTGAAGGATGG +
Preference number: 3 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICPIGVS*RRSEGW
Trigger: CCATCCTTCACTCCTCCTCAAGCTCACACCAATTGG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGGAAACAGCTCTGATTaGTTGTCACCACTGTTTCTC +
Preference number: 3 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQGNSSD*LSPLFL
Trigger: GAGAAACAGTGGTGACAACAAATCAGAGCTGTTTCC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGAGGCAGGAAACTCGCTaGAACCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: KHSFVVRIVCFHATIGELRQETR*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGCGAGTTTCCTGCCT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTATAATCTCATTACCTaGGAGGCCAAGGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFYNLIT*EAKVGR
Trigger: TCTGCCCACCTTGGCCTCCAAGGTAATGAGATTATA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTTCTTCTGTCTCTTTTaGTCTCCCTGGGATGGAATG +
Preference number: 3 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFFFCLF*SPWDGM
Trigger: CATTCCATCCCAGGGAGACAAAAAGAGACAGAAGAA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp AGCATTTCCATCTGCTTTCTGGCTCTAGGCTTGTTGTaGCTGTCCTTGTTGTGTGTTGTGTTGTGTCCTTGT +
Preference number: 3 (lower is better)
Translates to: SISICFLALGLL*LSLLCVVLCPC
Trigger: ACAAGGACACAACACAACACACAACAAGGACAGTCACAACAAGCCTAGAGCCAGAAAGCAGATGGAAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp AGGAACACCTTCCCTACCCAACCAGATCGAAAAGACTaGGCAAAGAGAAAAGTGTTCTCACAAACACCAGAC +
Preference number: 3 (lower is better)
Translates to: RNTFPTQPDRKD*AKRKVFSQTPD
Trigger: GTCTGGTGTTTGTGAGAACACTTTTCTCTTTGCTCAGTCTTTTCGATCTGGTTGGGTAGGGAAGGTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp CCCAGTGAAGGTCTGCTGAATTACACTGAACATAGCTaGAAACACAGACTCCCATCTGTTTACTACCTGCAT +
Preference number: 3 (lower is better)
Translates to: PSEGLLNYTEHS*KHRLPSVYYLH
Trigger: ATGCAGGTAGTAAACAGATGGGAGTCTGTGTTTGCAGCTATGTTCAGTGTAATTCAGCAGACCTTCACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp CCCCAAGCAATTCAGTGTTTGAATTGTGATGCTGCATaGCCCAGTCTCATTACAAACAAACAGAGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: PQAIQCLNCDAA*PSLITNKQSSA
Trigger: AGCACTGCTCTGTTTGTTTGTAATGAGACTGGGGCATGCAGCATCACAATTCAAACACTGAATTGCTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp AAACCAATTGGTGTGAGCTTGAGGAGGAGTGAAGGATaGGGACAGAGCATACACATTGATGACAAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: KPIGVSLRRSEG*GQSIHIDDKEE
Trigger: TTCCTCTTTGTCATCAATGTGTATGCTCTGTCCCCATCCTTCACTCCTCCTCAAGCTCACACCAATTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATTTTACAAAGGACCTaGACTCACAAACCGAGAAGG +
Preference number: 3 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQILQRT*THKPRR
Trigger: CCTTCTCGGTTTGTGAGTCAAGGTCCTTTGTAAAAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp TTAGGAGGTGGGAAAAGCTTCACAAGGTTGTTCTCATaGATCAGAAAGTTGAAAAGACCTGCCATGGGTCCT +
Preference number: 3 (lower is better)
Translates to: LGGGKSFTRLFS*IRKLKRPAMGP
Trigger: AGGACCCATGGCAGGTCTTTTCAACTTTCTGATTCATGAGAACAACCTTGTGAAGCTTTTCCCACCTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp ACCACTGTTTCTCTGCAAATGAGTCCACCAACCAAATaGTTCCTCAAATTATTCATCTTTGCTGCCCTAGCC +
Preference number: 3 (lower is better)
Translates to: TTVSLQMSPPTK*FLKLFIFAALA
Trigger: GGCTAGGGCAGCAAAGATGAATAATTTGAGGAAGCATTTGGTTGGTGGACTCATTTGCAGAGAAACAGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp GTGAGTGTTCTATATTGGCCAGGATGGATGCACTTTTaGCACCAAGGGTGGATGAGCCTTTATATTAACATC +
Preference number: 3 (lower is better)
Translates to: VSVLYWPGWMHF*HQGWMSLYINI
Trigger: GATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp CAGACCCTGCTTGTGGCCAAGGACCTATTCTTGGTTTaGGACTTTTCTTATAAGCTTATATGGCCTCAGAAA +
Preference number: 3 (lower is better)
Translates to: QTLLVAKDLFLV*DFSYKLIWPQK
Trigger: TTTCTGAGGCCATATAAGCTTATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGGCCACAAGCAGGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp CAGGCAATCACCTCGATCCAAGGCTTTCAACTCTCGTaGAATATCTGTCAGTTTGTCAGTTCAGCAAATAAC +
Preference number: 3 (lower is better)
Translates to: QAITSIQGFQLS*NICQFVSSANN
Trigger: GTTATTTGCTGAACTGACAAACTGACAGATATTCCACGAGAGTTGAAAGCCTTGGATCGAGGTGATTGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAATTCTCTTCACAGGTaGTGCATGTTAGGATGGAGA +
Preference number: 3 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFNSLHR*CMLGWR
Trigger: TCTCCATCCTAACATGCACAACCTGTGAAGAGAATT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGCACCAGGAGTGGAAGTaGGGGAGACTGGTCTTGTCT +
Preference number: 3 (lower is better)
Translates to: KHSFVVRIVCFHATIGELHQEWK*GRLVLS
Trigger: AGACAAGACCAGTCTCCCCAACTTCCACTCCTGGTG...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTATGAAGTGTTCTTTTaGCTGCCACAATTTTGGGAG +
Preference number: 3 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFYEVFF*LPQFWE
Trigger: CTCCCAAAATTGTGGCAGCAAAAAGAACACTTCATA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp TGGATGCCAGCATATGGAGGGTGGAAAATGCCAGACTaGTTAATGACACCTTTTTCTTGGGATCAGAATATC +
Preference number: 3 (lower is better)
Translates to: WMPAYGGWKMPD*LMTPFSWDQNI
Trigger: GATATTCTGATCCCAAGAAAAAGGTGTCATTAATCAGTCTGGCATTTTCCACCCTCCATATGCTGGCATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp AGCCATAGAGCCAAGAAGATTGCTAATTTCGAAGTGTaGTTGGTCGGGCTTTCTACTGATGATGTTGCTATT +
Preference number: 3 (lower is better)
Translates to: SHRAKKIANFEV*LVGLSTDDVAI
Trigger: AATAGCAACATCATCAGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGCAATCTTCTTGGCTCTATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp ATACGTGTGTGGGTGTCCCATTTCTGTTCTGAAATGTaGAGTAAAAAGGGTCCAGGTAACAGAGATGCATTT +
Preference number: 3 (lower is better)
Translates to: IRVWVSHFCSEM*SKKGPGNRDAF
Trigger: AAATGCATCTCTGTTACCTGGACCCTTTTTACTGCACATTTCAGAACAGAAATGGGACACCCACACACGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp TCAAACCCAGTCCCTTCACTGAGGTCAAGTGATCTCTaGGATTCAATTCAATTCAACATTTGTGGCACACAT +
Preference number: 3 (lower is better)
Translates to: SNPVPSLRSSDL*DSIQFNICGTH
Trigger: ATGTGTGCCACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGACTGGGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTATAGAGCCAAGAAGATaGCTAATTTCGAAGTGTGCT +
Preference number: 3 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFIEPRR*LISKCA
Trigger: AGCACACTTCGAAATTAGCAATCTTCTTGGCTCTAT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTATATTCAGGGAAATATaGCCTACTTCCCTGGAGAGC +
Preference number: 3 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICIFREI*PTSLES
Trigger: GCTCTCCAGGGAAGTAGGCAATATTTCCCTGAATAT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp ACAACAGATGTCTCAGTTACTTCACAGGATTTGTTGTaGGGTCCAAAGGAAGGAACAGATGCAGAAAACACT +
Preference number: 3 (lower is better)
Translates to: TTDVSVTSQDLL*GPKEGTDAENT
Trigger: AGTGTTTTCTGCATCTGTTCCTTCCTTTGGACCTCACAACAAATCCTGTGAAGTAACTGAGACATCTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp CTTTTGCCTGCAGCTGGACAATGGAAAGTGGTTATGTaGAAATTAAATTGTGCCAAGGGCTTTTGCTTGTCA +
Preference number: 3 (lower is better)
Translates to: LLPAAGQWKVVM*KLNCAKGFCLS
Trigger: TGACAAGCAAAAGCCCTTGGCACAATTTAATTTTCACATAACCACTTTCCATTGTCCAGCTGCAGGCAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp AAAGGAAGGAACAGATGCAGAAAACACTTTAGGAGGTaGGAAAAGCTTCACAAGGTTGTTCTCATGAATCAG +
Preference number: 3 (lower is better)
Translates to: KGRNRCRKHFRR*EKLHKVVLMNQ
Trigger: CTGATTCATGAGAACAACCTTGTGAAGCTTTTCCCACCTCCTAAAGTGTTTTCTGCATCTGTTCCTTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp CTTCTCAAGTCTGTTGCCCTCTTTTCATTAGTCTACTaGGAATTGAACTTCATGTTGATGAATCTGCTCTGC +
Preference number: 3 (lower is better)
Translates to: LLKSVALFSLVY*ELNFMLMNLLC
Trigger: GCAGAGCAGATTCATCAACATGAAGTTCAATTCCCAGTAGACTAATGAAAAGAGGGCAACAGACTTGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTTTGGGAGAATTCAGTaGCTCCTAAATGCCCAACTA +
Preference number: 3 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICFGRIQ*LLNAQL
Trigger: TAGTTGGGCATTTAGGAGCAACTGAATTCTCCCAAA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCCAAGGACCTATTCTaGGTTTGGGACTTTTCTTAT +
Preference number: 3 (lower is better)
Translates to: QLRADHLQTALTLEAIDLAKDLF*VWDFSY
Trigger: ATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp AGCTCTGATTTGTTGTCACCACTGTTTCTCTGCAAATaGGTCCACCAACCAAATGCTTCCTCAAATTATTCA +
Preference number: 3 (lower is better)
Translates to: SSDLLSPLFLCK*VHQPNASSNYS
Trigger: TGAATAATTTGAGGAAGCATTTGGTTGGTGGACTCATTTGCAGAGAAACAGTGGTGACAACAAATCAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CCA 72 bp ATAGAGCCAAGAAGATTGCTAATTTCGAAGTGTGCTTaGTCGGGCTTTCTACTGATGATGTTGCTATTGATT +
Preference number: 3 (lower is better)
Translates to: IEPRRLLISKCA*SGFLLMMLLLI
Trigger: AATCAATAGCAACATCATCAGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGCAATCTTCTTGGCTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp ATGCAAAGATGTTGGTCTAAACCCTGCTTGATAGGATaGTTGAGTAAATTCAAGAAAGTGGTAATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: MQRCWSKPCLIG*LSKFKKVVMRA
Trigger: AGCCCTCATTACCACTTTCTTGAATTTACTCAATCATCCTATCAAGCAGGGTTTAGACCAACATCTTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp CAATATCTCCTATCTTACTTTTTGAGTGATCAGCCCTaGCTTTCAAGTCTAAATTTCTCCTCCACGCCAAAA +
Preference number: 3 (lower is better)
Translates to: QYLLSYFLSDQP*LSSLNFSSTPK
Trigger: TTTTGGCGTGGAGGAGAAATTTAGACTTGAAAGTCAGGGCTGATCACTCAAAAAGTAAGATAGGAGATATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp GAAACATTCATTTGTTGTACGTATTGTCTGTTTTCATaGTACAATAGGAGAGCTGAGTACAGTCATCCCTCA +
Preference number: 3 (lower is better)
Translates to: ETFICCTYCLFS*YNRRAEYSHPS
Trigger: TGAGGGATGACTGTACTCAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGGAATATCTGTCAGTTaGTCAGTTCAGCAAATAACA +
Preference number: 3 (lower is better)
Translates to: QLRADHLQTALTLEAIDLGISVS*SVQQIT
Trigger: TGTTATTTGCTGAACTGACAAACTGACAGATATTCC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR TCA 72 bp TTCAATTTGGGGTATACTCATACTACTGAGTCTCTATaGAGGAGTGATAAGCTGGGTCTTCAATTTCCAAAT +
Preference number: 3 (lower is better)
Translates to: FNLGYTHTTESL*RSDKLGLQFPN
Trigger: ATTTGGAAATTGAAGACCCAGCTTATCACTCCTTCATAGAGACTCAGTAGTATGAGTATACCCCAAATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp TGGACAATGGAAAGTGGTTATGTGAAAATTAAATTGTaGCAAGGGCTTTTGCTTGTCAGCCTCAATAAATGT +
Preference number: 3 (lower is better)
Translates to: WTMESGYVKIKL*QGLLLVSLNKC
Trigger: ACATTTATTGAGGCTGACAAGCAAAAGCCCTTGGCACAATTTAATTTTCACATAACCACTTTCCATTGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR GCA 72 bp CATTTTTGGTATCTAGATGAATTTGGGCCTTGGCTGTaGTTACAGCATTTGATCAAATGTATGATGATATAT +
Preference number: 3 (lower is better)
Translates to: HFWYLDEFGPWL*LQHLIKCMMIY
Trigger: ATATATCATCATACATTTGATCAAATGCTGTAAGCACAGCCAAGGCCCAAATTCATCTAGATACCAAAAATG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGAGCCGGCCCTCTCCTaGTGTCTTGTTGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCEPALS*CLVEHH
Trigger: GTGGTGCTCAACAAGACATCAGGAGAGGGCCGGCTC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGCCGTGCCCGATGGGTaGGCTTCTAGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREAVPDG*ASSAAA
Trigger: GGCGGCAGCGCTAGAAGCGCACCCATCGGGCACGGC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTCTCCAGGTGGATGCTaGGGAACAGGGGCATGCTCC +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCSPGGC*GTGACS
Trigger: GGAGCATGCCCCTGTTCCCCAGCATCCACCTGGAGA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp AACCTACTGGTCTGTGTGGAGGAGACGCACAGTGAGTaGGAACCCCAGGGCCTTGGGGACTCTGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NLLVCVEETHSE*EPQGLGDSEPG
Trigger: CCCAGGCTCAGAGTCCCCAAGGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCCACACAGACCAGTAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp TTGGGCCTCAGGAGGGCTCCCTTGCATCAGTCTGGCTaGTGCCTTTTGAGACTTGGCTCCTGCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LGLRRAPLHQSG*CLLRLGSCWPL
Trigger: GAGGGGCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAGGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTGGGGAACAGGGGCATaGTCCCGGAGCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKWGTGA*SRSQAG
Trigger: ACCAGCCTGGCTCCGGGAGCATGCCCCTGTTCCCCA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGGGGCAGTGCCTGTGTaGAATGCCTCCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWGAVPV*NASWAL
Trigger: CAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCATGGCAGCCTCTCCTaGGCAGTCTCTCTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCHGSLS*AVSLSR
Trigger: CCTAGAGAGAGAGACTGCCCAGGAGAGGCTGCCATG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGAGATCATTATGGGCTaGGCTGTGCTGGGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCEIIMG*AVLGRH
Trigger: GTGCCTTCCCAGCACAGCTCAGCCCATAATGATCTC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGTGACTTCTCCTCCTTaGCAACAAGCGCCGACTGTG +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCVTSPP*QQAPTV
Trigger: CACAGTCGGCGCTTGTTGGCAAGGAGGAGAAGTCAC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTGGGGGATCAGACCCTaGTTGTGGCCAAGGACCTAT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCWGIRP*LWPRTY
Trigger: ATAGGTCCTTGGCCACAAGCAGGGTCTGATCCCCCA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGGGGGTTGTTCCTGGTaGTGTCACTTGTACCCACTC +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCGGCSW*CHLYPL
Trigger: GAGTGGGTACAAGTGACAGCACCAGGAACAACCCCC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTCGCACGTCTCCAGGTaGATGCTGGGGAACAGGGGC +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKSHVSR*MLGNRG
Trigger: GCCCCTGTTCCCCAGCATCCACCTGGAGACGTGCGA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGCCCAGGATGGGGGCTaGGGGTGGTTTGCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWAQDGG*GWFALA
Trigger: TGCCAAAGCAAACCACCCCCAGCCCCCATCCTGGGC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGCGGGGTCCTGCCTCTaGGGAGGTGTTGCCTCAATG +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWAGSCL*GGVASM
Trigger: CATTGAGGCAACACCTCCCCAGAGGCAGGACCCCGC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTACCACCCTCCTTGTATaGAGCAACCTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCTTLLV*SNLESA
Trigger: TGCTGACTCCAGGTTGCTTCATACAAGGAGGGTGGT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCAGCCGCCAACGAGCTaGAGCCGCCGCCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSQPPTS*SRRLLS
Trigger: GGACAGTAGGCGGCGGCTGCAGCTCGTTGGCGGCTG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGTCCACCAGCAGTCCTaGAGTCCAGTTGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWVHQQS*SPVGGS
Trigger: GCTGCCACCAACTGGACTGCAGGACTGCTGGTGGAC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTGGATGAAGTGCTGGTaGGCGATCCGGACCCGGTAC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWWMKCW*AIRTRY
Trigger: GTACCGGGTCCGGATCGCCCACCAGCACTTCATCCA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CAGGCCAAGAGCTCCTCATGGTCAGGGAAACATGCCTaGTTCATCCTCCCTTCCCCTGTTGCTGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: QAKSSSWSGKHA*FILPSPVAGTG
Trigger: CCCTGTGCCAGCAACAGGGGAAGGGAGGATGAACAAGGCATGTTTCCCTGACCATGAGGAGCTCTTGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp AGGAGGGCTCCCTTGCATCAGTCTGGCTTGTGCCTTTaGAGACTTGGCTCCTGCTGGCCCCTCTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: RRAPLHQSGLCL*RLGSCWPLYLH
Trigger: ATGCAGGTAGAGGGGCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAAGGGAGCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCTACCTCAGGGATACTaGTGCATACGTCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCLPQGY*CIRLPQ
Trigger: TTGGGGAAGACGTATGCATCAGTATCCCTGAGGTAG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTTGGTGAGAGGCTTATaGGAGCAGCTTGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCLVRGL*EQLAFS
Trigger: GGAGAAAGCAAGCTGCTCTCATAAGCCTCTCACCAA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATTGGGATGCTGCCCATaGCCTCGACGGTGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRELGCCP*PRRWSK
Trigger: CTTGCTCCACCGTCGAGGTCATGGGCAGCATCCCAA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCCTCCACCTGCAGAATaGTGTCATAGATCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCPPPAE*CHRSCP
Trigger: AGGGCAAGATCTATGACAGCATTCTGCAGGTGGAGG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGGCAGCGCTAGGGGATaGCAAGAGGTCAATGATGCC +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKGSARG*QEVNDA
Trigger: GGCATCATTGACCTCTTGCCATCCCCTAGCGCTGCC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGCAGCCTCAGTCTCCTaGATGAAGTGCTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREAASVS*MKCWWA
Trigger: CGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATGGGCTGAGCTGTGCTaGGAAGGCACTGAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREWAELC*EGTEPW
Trigger: CCAAGGCTCAGTGCCTTCCCAGCACAGCTCAGCCCA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGAACTGCATGTTCTCATaGGGGCGGGGTCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKNCMFS*GRGPAS
Trigger: AGAGGCAGGACCCCGCCCCCATGAGAACATGCAGTT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTAACCGAGAAGGAAGTTaGAGGAGGCTTTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCNREGS*RRLSPL
Trigger: CAGTGGAGAAAGCCTCCTCCAACTTCCTTCTCGGTT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp GGGCCCTGGCCCTCTGACTCTCCATCTCAAAACCCCTaGTATGAGGAGACTGTACCTCGTAGGAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GPWPSDSPSQNP*YEETVPRRRSQ
Trigger: CTGACTCCTCCTACGAGGTACAGTCTCCTCATACAAGGGGTTTTGAGATGGAGAGTCAGAGGGCCAGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGACCACGGCCTTGTGTaGCTTTTTCCAGGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWDHGLV*LFPGCL
Trigger: GAGACAGCCTGGAAAAAGTCACACAAGGCCGTGGTC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGATGGCAAGAGGTCAATaGTGCCAGAGGAGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKMARGQ*CQRRLH
Trigger: GTGGAGCCTCCTCTGGCATCATTGACCTCTTGCCAT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTGCCAGGGCGGATGGTaGGACTGGCCAGGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGCQGGW*DWPGFH
Trigger: ATGGAAGCCTGGCCAGTCTCACCATCCGCCCTGGCA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGGAGGAGACGCACAGTaGGTTGGAACCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSGGDAQ*VGTPGP
Trigger: AGGCCCTGGGGTTCCAACTCACTGTGCGTCTCCTCC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCATAAGGCTGAGTGGTaGGAGCCTTGCCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWHKAEW*EPCQPQ
Trigger: CTGAGGTTGGCAAGGCTCTCACCACTCAGCCTTATG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTGGGCCGCCTCGCCGTaGCCGATGGGTGCGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFWAASP*PMGALL
Trigger: TAGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGTCTCCTGGATGAAGTaGTGGTGGGCGATCCGGACC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKVSWMK*WWAIRT
Trigger: GGTCCGGATCGCCCACCAGCACTTCATCCAGGAGAC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGTTCTGTTTGCTGAGTaGCCCTGGCAGGGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREVLFAE*PWQGSC
Trigger: GCAGCTACCCTGCCAGGGGCACTCAGCAAACAGAAC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAGGAATGGGGGACATTaGTTCTCACCACCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWRNGGH*FSPPPA
Trigger: AGCTGGGGGTGGTGAGAAGCAATGTCCCCCATTCCT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGGGCTGGGGGTGGTTTaGTTTGGCACCCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKGLGVV*FGTLTA
Trigger: TGCAGTGAGGGTGCCAAAGCAAACCACCCCCAGCCC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGGCCCTCGAAGAGGCTaGTCAGCTTACAGAAACCTG +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWGPRRG*SAYRNL
Trigger: CAGGTTTCTGTAAGCTGAGCAGCCTCTTCGAGGGCC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAGCAGTCCTCGTCAATaGCCTCCACCTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWSSPRQ*PPPAEC
Trigger: GCATTCTGCAGGTGGAGGCCATTGACGAGGACTGCT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGATCGGTCAGGTTCTTaGGCACAATCCCATCGGGGA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKDRSGS*AQSHRG
Trigger: TCCCCGATGGGATTGTGCCCAAGAACCTGACCGATC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTCCTGGATGAAGTGCTaGTGGGCGATCCGGACCCGG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGSWMKC*WAIRTR
Trigger: CCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGTTCTCAGAGCTTCGTaGAAATTCTGTCAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCVLRAS*KFCQGP
Trigger: AGGGCCTTGACAGAATTTCCACGAAGCTCTGAGAAC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTGCTTTCTCCTGAGGTaGAAGGCTAACTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCCFLLR*KANFHG
Trigger: ACCATGGAAGTTAGCCTTCCACCTCAGGAGAAAGCA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAACAGCTTACAGAAACCTaGCAGGTGGCCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREQLTET*QVAFLG
Trigger: CCCCAGGAAGGCCACCTGCCAGGTTTCTGTAAGCTG...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp TGGGTGGGCGTGGGCTCCAGATGTGAGTGTTCTATATaGGCCAGGATGGATGCACTTTTGCCACCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: WVGVGSRCECSI*ARMDALLPPRV
Trigger: CACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAGAACACTCACATCTGGAGCCCACGCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp GCATCTGGGGGAGGGGGTTGTTCCTGGTGCTGTCACTaGTACCCACTCTCCTGTTTCCTCTCCAACTATGAG +
Preference number: 4 (lower is better)
Translates to: ASGGGGCSWCCH*YPLSCFLSNYE
Trigger: CTCATAGTTGGAGAGGAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGAACAACCCCCTCCCCCAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGATGGTGATGGTGAACTaGTCGGTCAGGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWMVMVN*SVRFLG
Trigger: GCCCAAGAACCTGACCGATCAGTTCACCATCACCAT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGCGCCCATTGAGTTCTaGGCACTTAATCCGGAAACG +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWAPIEF*ALNPET
Trigger: CGTTTCCGGATTAAGTGCTCAGAACTCAATGGGCGC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGACATGCTCCTTATCTaGGACTTGGTCTTCATGAAG +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCDMLLI*DLVFMK
Trigger: CTTCATGAAGACCAAGTCTCAGATAAGGAGCATGTC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAAGGGTGTTGCGAAGATaGCCAATGCCTGCCAACCCA +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRERVLRR*PMPANP
Trigger: TGGGTTGGCAGGCATTGGTCATCTTCGCAACACCCT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCTACTGGGTAGTTGGTaGGAGGCTTATGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKLLGSW*EAYESS
Trigger: GCTGCTCTCATAAGCCTCTCACCAACTACCCAGTAG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAGGGCCCTGGCCCTCTaGCTCTCCATCTCAAAACCC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGRALAL*LSISKP
Trigger: GGGTTTTGAGATGGAGAGTCAGAGGGCCAGGGCCCT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCGGGTTCCCGCCGCTaGGCCGCTAGCTCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSGSRR*AASSPA
Trigger: TGCCGGCGAGCTAGCGGCGCAGCGGCGGGAACCCGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCTCTTGGTCCAGTCTTaGCAGCCAGGCTTGCAAACT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWLLVQS*QPGLQT
Trigger: AGTTTGCAAGCCTGGCTGGCAAGACTGGACCAAGAG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGGACTTTGGCACCCTaGCTGCCGTCAAACTTGAAG +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGTLAP*LPSNLK
Trigger: CTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGCCCATGTCTGCCTCTaGCCATCCCTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGAHVCL*PSLPPP
Trigger: AGGAGGAGGAAGGGATGGGCAGAGGCAGACATGGGC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAGTCCTGACTGCTCGTaGACAGCTTCCAACACCACA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWSPDCS*TASNTT
Trigger: TGTGGTGTTGGAAGCTGTGCACGAGCAGTCAGGACT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATTGAGACTTGGCTCCTaGTGGCCCCTCTACCTGCAT +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRELRLGS*WPLYLH
Trigger: ATGCAGGTAGAGGGGCCAGCAGGAGCCAAGTCTCAA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGCCCAGGGAACCACTaGTCCTCAGCACCAAATGTA +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGPGNH*SSAPNV
Trigger: TACATTTGGTGCTGAGGAGCAGTGGTTCCCTGGGCC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGGTACTCAATCCTCTTaGTCCAGTCTTGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKGTQSS*SSLASQ
Trigger: CTGGCTGGCAAGACTGGACCAAGAGGATTGAGTACC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGACCACTGAACTGTGCTaGATGCTACTCCGGGACTCA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKTTELC*MLLRDS
Trigger: TGAGTCCCGGAGTAGCATCCAGCACAGTTCAGTGGT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCCAGCTGGGCTTGCCTaGCTCCATTCTGCCCATGTC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSPAGLA*LHSAHV
Trigger: GACATGGGCAGAATGGAGCCAGGCAAGCCCAGCTGG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGGCCTTCAGGGGTTTTaGTTCCTGGATGCCAGCATA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWGLQGF*FLDASI
Trigger: TATGCTGGCATCCAGGAACCAAAACCCCTGAAGGCC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGAGCAGGAGAGAATCTaGGTTCTTCAGAACTCAACA +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCEQERI*VLQNST
Trigger: TGTTGAGTTCTGAAGAACCCAGATTCTCTCCTGCTC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp GTCCTTGTTGTCCTTGTTGTGACTGTCCTTGTTGTGTaGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLVVLVVTVLVV*SWGSACVECLL
Trigger: CAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGGACAGTCACAACAAGGACAACAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCTTTGGAGGATACTTTaGGGCGCCGCACACCCGCCG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQLWRIL*GAAHPP
Trigger: CGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCACAGACATCAGAGGTaGGGTATGATAGACATGGGC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWHRHQR*GMIDMG
Trigger: GCCCATGTCTATCATACCTCACCTCTGATGTCTGTG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCAGCTCTCTCAACTATaGATAAGGCAGCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKQLSQL*IRQPPR
Trigger: TCTGGGTGGCTGCCTTATTCATAGTTGAGAGAGCTG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCATCAGTCTGGCTTGTaGCTTTTGAGACTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWHQSGL*LLRLGS
Trigger: GGAGCCAAGTCTCAAAAGGCACAAGCCAGACTGATG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGTCAGTTCTTCCCGATaGCAGCTCAAGTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWVSSSR*QLKSSP
Trigger: AGGAGATGACTTGAGCTGGCATCGGGAAGAACTGAC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTTGTCCTCTGTTCACTaGACTTCCACCCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWLSSVH*TSTLVD
Trigger: ATCGACGAGGGTGGAAGTGCAGTGAACAGAGGACAA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAGTCAATGGGGCTCTTaGCACGGAGCCGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSQWGS*HGAGPL
Trigger: GAGAGGGCCGGCTCCGTGCCAAGAGCCCCATTGACT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCTCCCGGAGCCAGGCTaGTACTCAATCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLPEPG*YSILLV
Trigger: GACCAAGAGGATTGAGTACCAGCCTGGCTCCGGGAG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAAGCTCTGTGACGATCTaGAGGGAAGACACGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKSSVTI*REDTAP
Trigger: TGGAGCCGTGTCTTCCCTCCAGATCGTCACAGAGCT...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCTCTCACACCAGGGCTaGGGCCGTGTTTCATCCACA +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSLSHQG*GRVSST
Trigger: TGTGGATGAAACACGGCCCCAGCCCTGGTGTGAGAG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGCTCATAGCGGCTCATaGAGCCCACACCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGAHSGS*SPHRRW
Trigger: CCATCTACGGTGTGGGCTCCATGAGCCGCTATGAGC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGAGACAAGCAATGAACTaGGCTGTGGCCAAACCAGTC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWRQAMN*AVAKPV
Trigger: GACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGAAGGCACTGAGCCTTaGGGGGCTAACACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSEGTEP*GANTCL
Trigger: GAGGCAAGTGTTAGCCCCCCAAGGCTCAGTGCCTTC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTCTTTTGCCTGCAGCTaGACAATGGAAAGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCSFACS*TMESGY
Trigger: ATAACCACTTTCCATTGTCCAGCTGCAGGCAAAAGA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTATCTGTCAGCTTTCTaGGGTGCTGCTGGAGGTAAC +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKYLSAF*GAAGGN
Trigger: GTTACCTCCAGCAGCACCCCAGAAAGCTGACAGATA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAACGTTTTCCAAGGTCCTaGCCAGGCACCACATCATTC +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRERFPRS*PGTTSF
Trigger: GAATGATGTGGTGCCTGGCCAGGACCTTGGAAAACG...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp AGGTGGAAGGCTAACTTCCATGGTGTATGGTACGGGTaGCCAAACTTTGGCCTTGGGCCAAATCTAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RWKANFHGVWYG*PNFGLGPNLAG
Trigger: GCCAGCTAGATTTGGCCCAAGGCCAAAGTTTGGCAACCCGTACCATACACCATGGAAGTTAGCCTTCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CCCCACTCCTGTTTTCTCCCACGTGCATCACAAATGTaGTCCTCTGTTCACTGCACTTCCACCCTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: PHSCFLPRASQM*SSVHCTSTLVD
Trigger: ATCGACGAGGGTGGAAGTGCAGTGAACAGAGGACAACATTTGTGATGCACGTGGGAGAAAACAGGAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCTGTGCCCCGGAGGGTaGTCCGGGGCTCGATGGCCT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLCPGG*SGARWP
Trigger: AGGCCATCGAGCCCCGGATCACCCTCCGGGGCACAG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGAGGTGCTCACAATCTTaGTATCAGGGAAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKRCSQS*YQGRGS
Trigger: TGACCCTCTTCCCTGATATCAAGATTGTGAGCACCT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCCACTCCACCCACCATaGAGCCTACGTTTGACCTCA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGPLHPP*SLRLTS
Trigger: TGAGGTCAAACGTAGGCTTCATGGTGGGTGGAGTGG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCCTGATCTTTGTAGCTaGCATGCAGAGAATGACCTC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWPDLCS*HAENDL
Trigger: GAGGTCATTCTCTGCATGTCAGCTACAAAGATCAGG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCTGAGATCAGGAGTTTaGGACCAGCCTGGCCAACAC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLRSGV*DQPGQH
Trigger: GTGTTGGCCAGGCTGGTCTCAAACTCCTGATCTCAG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGATCACAAGTGCCCAGTaGAGGTCTGCTGAATTACAC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWITSAQ*RSAELH
Trigger: GTGTAATTCAGCAGACCTTCACTGGGCACTTGTGAT...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGAACTGAGTCAGCCTTaGTTGGAATTGAGGAATATT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCELSQP*LELRNI
Trigger: AATATTCCTCAATTCCAATCAAGGCTGACTCAGTTC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTCACAGAGGCCCTTATaGATCCTTCTGAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWSQRPL*ILLKRR
Trigger: TCTCCTCTTCAGAAGGATTCATAAGGGCCTCTGTGA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGCCACCAAGGGTGGATaGGCCTTTATATTAACATCC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWATKGG*AFILTS
Trigger: GGATGTTAATATAAAGGCTCATCCACCCTTGGTGGC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTTTCCTCTCCAACTATaGGTCACATTTTCCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCFPLQL*VTFSLN
Trigger: ATTGAGGGAAAATGTGACTCATAGTTGGAGAGGAAA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTAGTTCAATTAAGAGCTaGTCACCTTCAAACAGCTCT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCSSIKS*SPSNSS
Trigger: AGAGCTGTTTGAAGGTGATCAGCTCTTAATTGAACT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGTCTCATCTTCCCCATaGCCTGGTCCTTCATGTTTC +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREVSSSP*PGPSCF
Trigger: GAAACATGAAGGACCAGGGCATGGGGAAGATGAGAC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATGCGAAGATGACCAATaGCTGCCAACCCAGCGGATT +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKCEDDQ*LPTQRI
Trigger: AATCCGCTGGGTTGGCAGGCATTGGTCATCTTCGCA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAACAAGCCACATTACCCTaGTCACCTGGATACCTCCCA +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKQATLP*SPGYLP
Trigger: TGGGAGGTATCCAGGTGAGCAGGGTAATGTGGCTTG...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAACCTGCCAGAGTACATTaGAGAAGGCTTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKPARVH*RRLWGS
Trigger: GGATCCCCAAAGCCTTCTGCAATGTACTCTGGCAGG...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCAACCATGTTATTTCTaGCCAGTGGGCAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWQPCYF*PVGRVT
Trigger: AGTTACCCTGCCCACTGGGCAGAAATAACATGGTTG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGGCAGCTCCTGGCCATaGATCTTGAACGCACAGATT +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKGSSWP*ILNAQI
Trigger: AATCTGTGCGTTCAAGATCCATGGCCAGGAGCTGCC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCGCACACCCGCCGTTaGGAACTGCCTGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPHTRR*ELPGVD
Trigger: ATCAACTCCAGGCAGTTCCCAACGGCGGGTGTGCGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGCATCCAGGTGTCGTTaGTGGAGCTCACTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGASRCR*WSSLWL
Trigger: CAACCACAGTGAGCTCCACCAACGACACCTGGATGC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCCCGGTACACACCCATaGCCACGACAAACACAAGCA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGPGTHP*PRQTQA
Trigger: TGCTTGTGTTTGTCGTGGCCATGGGTGTGTACCGGG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTTTGCTGAGTGCCCCTaGCAGGGTAGCTGCATGGTT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSFAECP*QGSCMV
Trigger: AACCATGCAGCTACCCTGCCAGGGGCACTCAGCAAA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGCCATGGGTCCTCCCTaGGTGGAGGTCAGACTAGAG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQAMGPP*VEVRLE
Trigger: CTCTAGTCTGACCTCCACCCAGGGAGGACCCATGGC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCCCCAGCTCTCTCACTaGATGGTCCATGTATACAAA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKPQLSH*MVHVYK
Trigger: TTTGTATACATGGACCATCCAGTGAGAGAGCTGGGG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGTGCCTTTTGAGACTTaGCTCCTGCTGGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGVPFET*LLLAPL
Trigger: TAGAGGGGCCAGCAGGAGCCAAGTCTCAAAAGGCAC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCAGGTCTCGTGGAGGTaGGCCCTCCTTAGATCTTCA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGQVSWR*ALLRSS
Trigger: TGAAGATCTAAGGAGGGCCCACCTCCACGAGACCTG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCTCAGCAGGTCTCGTaGAGGTGGGCCCTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPQQVS*RWALLR
Trigger: TCTAAGGAGGGCCCACCTCCACGAGACCTGCTGAGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCCCTCAATACGTGTGTaGGTGTCCCATTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKPSIRV*VSHFCS
Trigger: AGAACAGAAATGGGACACCCACACACGTATTGAGGG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCAATGCTTTGGCATCTaGGGGAGGGGGTTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGQCFGI*GRGLFL
Trigger: CAGGAACAACCCCCTCCCCCAGATGCCAAAGCATTG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTGGGAGCAAACTCGTTaGCATCCTTCACCTGTATAT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWWEQTR*HPSPVY
Trigger: ATATACAGGTGAAGGATGTCAACGAGTTTGCTCCCA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGCCTGCCGTCAAACTTaGAGATCATCTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKACRQT*RSSHCC
Trigger: ACAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGGCTGCACAATCAGATaGTTGACATGCTCCTTATCT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWGCTIR*LTCSLS
Trigger: AGATAAGGAGCATGTCAATCATCTGATTGTGCAGCC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCTCAGTCTCCTGGATaGAGTGCTGGTGGGCGATCC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPQSPG*SAGGRS
Trigger: GGATCGCCCACCAGCACTTCATCCAGGAGACTGAGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGAACTTCCCCATGGATaGAACACAGGGAGTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGELPHG*NTGSAQ
Trigger: TTGGGCACTCCCTGTGTTTCATCCATGGGGAAGTTC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCACTGGTTAAGTTTGTaGCCGCATCCTTCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKHWLSL*PHPSSL
Trigger: AAGAGAAGAAGGATGCGGTCACAAACTTAACCAGTG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGCCACCCAGAGAGCATaGGGAACACCTTCCCTACCC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFATQRA*GTPSLP
Trigger: GGGTAGGGAAGGTGTTCCTCATGCTCTCTGGGTGGC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCTGTTTCTCTGCAAATaGGTCCACCAACCAAATGCT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKLFLCK*VHQPNA
Trigger: AGCATTTGGTTGGTGGACTCATTTGCAGAGAAACAG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAGTTCCTCCTGGACATaGGCCTGCATCTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSSSWT*ACICLA
Trigger: AGCCAGGCAGATGCAGGCTCATGTCCAGGAGGAACT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCAGCTTGCTTTCTCCTaGGGTGGAAGGCTAACTTCC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGQLAFS*GGRLTS
Trigger: GGAAGTTAGCCTTCCACCTCAGGAGAAAGCAAGCTG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCTGGCTTGTGCCTTTTaGGACTTGGCTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLACAF*DLAPAG
Trigger: GCCAGCAGGAGCCAAGTCTCAAAAGGCACAAGCCAG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCACATGTTCCCAGGTaGTGCAGCTGGCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSHVPR*CSWPRE
Trigger: TTCCCTGGGCCAGCTGCATCACCTGGGAACATGTGA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCGTGGGCTCCAGATGTaGGTGTTCTATATTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSRGLQM*VFYIGQ
Trigger: CTGGCCAATATAGAACACTCACATCTGGAGCCCACG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCGCACAGATTTCCCCTaGAAAAGGAACCGGTGCATC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGRTDFP*KRNRCI
Trigger: GATGCACCGGTTCCTTTTGCAGGGGAAATCTGTGCG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCAGCTCCAAGCACTCCTaGCTTGGGTCCAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSSKHS*LGSKSP
Trigger: AGGGGACTTGGACCCAAGGCAGGAGTGCTTGGAGCT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGTAGATGGAGTAGCCTaGAGTAGAATTAGTGGCATC +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKVDGVA*SRISGI
Trigger: GATGCCACTAATTCTACTGCAGGCTACTCCATCTAC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCTGAACTGTGCTGGATaGTACTCCGGGACTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLNCAG*YSGTQD
Trigger: ATCCTGAGTCCCGGAGTAGCATCCAGCACAGTTCAG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTACCAACTAGCCGGTTaGTTTACTCCACTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWYQLAG*FTPLKQ
Trigger: TTGCTTCAGTGGAGTAAAGCAACCGGCTAGTTGGTA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGTACCATTCATAGCCTaGCAGAGTACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKVPFIA*QSTLQK
Trigger: CTTCTGCAATGTACTCTGGCAGGCTATGAATGGTAC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCTGTTTTCTCCCACGTaGATCACAAATGTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWLFSPT*ITNVVL
Trigger: GAGGACAACATTTGTGATGCACGTGGGAGAAAACAG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCAGGCACATCTACCCCTaGTCCTTGCTTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFRHIYP*SLLRGS
Trigger: GGAGCCCCTAAGCAAGGAGCAGGGGTAGATGTGCCT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCTGGTAGCTCCTCCTaGCGGGGAAAAGGACCCTCA +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSGSSS*RGKGPS
Trigger: TGAGGGTCCTTTTCCCCGGCAGGAGGAGCTACCAGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTGGGTTGATTCTCTCTaGACACAAAATGTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKWVDSL*TQNVGS
Trigger: TGAGCCCACATTTTGTGTGCAGAGAGAATCAACCCA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAATCCAGGGCTACCAGTaGTGGGTCCAAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKIQGYQ*WVQNDC
Trigger: ACAGTCATTTTGGACCCACCACTGGTAGCCCTGGAT...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAACTGAGTTGCAGAGGATaGTTTCCTTCTCGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKLSCRG*FPSRLS
Trigger: TGAGAGCCGAGAAGGAAACCATCCTCTGCAACTCAG...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAACTGTGCCAAACCAATTaGTGTGAGCTTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKLCQTN*CELEEE
Trigger: CTCCTCCTCAAGCTCACACCAATTGGTTTGGCACAG...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAAACCCCAGCTTCTTCTaGTGTTTTTCCCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRENPSFF*CFSLRR
Trigger: CCTTCTCAGGGAAAAACACCAGAAGAAGCTGGGGTT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGATGAATTTGGGCCTTaGCTGTGCTTACAGCATTTG +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWDEFGP*LCLQHL
Trigger: CAAATGCTGTAAGCACAGCCAAGGCCCAAATTCATC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGATAATCTCATTACCTTaGAGGCCAAGGTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKIISLP*RPRWAD
Trigger: ATCTGCCCACCTTGGCCTCCAAGGTAATGAGATTAT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGTATCTGTAGGGGATTaGTTCCAGAACTCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGVSVGD*FQNSPR
Trigger: CCGAGGGGAGTTCTGGAACCAATCCCCTACAGATAC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTCCTGTTGTTCAGTTTaGAGGCAAAGACTACTGGGT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKSCCSV*RQRLLG
Trigger: ACCCAGTAGTCTTTGCCTCCAAACTGAACAACAGGA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGAGTGGGCAGGGTAACTaGCTTTCATCCATAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKSGQGN*LSSISE
Trigger: TTCACTTATGGATGAAAGCCAGTTACCCTGCCCACT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGTCTGCACACAAAATGTaGGCTCATTTCTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWSAHKM*AHFSGS
Trigger: GCTACCAGAGAAATGAGCCCACATTTTGTGTGCAGA...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTACAGAGCAATGCTTTaGCATCTGGGGGAGGGGGTT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGYRAML*HLGEGV
Trigger: AACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp GTTAGAGGTCATAGGGTGTCTAGGCCTTCAGGGGTTTaGGTTCCTGGATGCCAGCATATGGAGGGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: VRGHRVSRPSGV*VPGCQHMEGGK
Trigger: TTTTCCACCCTCCATATGCTGGCATCCAGGAACCAAAACCCCTGAAGGCCTAGACACCCTATGACCTCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CAGAATCCTGTACCATTCATAGCCTGCCAGAGTACATaGCAGAAGGCTTTGGGGATCCCCCAGAGGCCTAAA +
Preference number: 4 (lower is better)
Translates to: QNPVPFIACQST*QKALGIPQRPK
Trigger: TTTAGGCCTCTGGGGGATCCCCAAAGCCTTCTGCAATGTACTCTGGCAGGCTATGAATGGTACAGGATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTATGACTCCATGATATaGAGTCTCGATCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKYDSMI*SLDPWL
Trigger: AAGCCATGGATCGAGACTTCATATCATGGAGTCATA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCCTGGCCATGGATCTTaGACGCACAGATTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQPGHGS*THRFPL
Trigger: CAGGGGAAATCTGTGCGTTCAAGATCCATGGCCAGG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGCACAATCAGATGATTaGCATGCTCCTTATCTGAGA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWAQSDD*HAPYLR
Trigger: TCTCAGATAAGGAGCATGTCAATCATCTGATTGTGC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCTCAGTCTGCCTCAGTaGTGCATATCAGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQLSLPQ*CISGPL
Trigger: TAGGGGCCCTGATATGCATCACTGAGGCAGACTGAG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGACTTTGGAAGCAATTaGTTTGACTGCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKDFGSN*FDCLFG
Trigger: ACCAAAGAGGCAGTCAAATCAATTGCTTCCAAAGTC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGCTAATTTCGAAGTGTaGTTGGTCGGGCTTTCTACT +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREANFEV*LVGLST
Trigger: AGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCTTCAAAACTTTCATTaGTCATTTCTTTTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCLQNFH*SFLLPA
Trigger: TGCAGGCAAAAGAAATGAGCAATGAAAGTTTTGAAG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGCCAGGCTTGCAAACTaGCTTCACATCCACCTGCAC +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQARLAN*LHIHLH
Trigger: GTGCAGGTGGATGTGAAGCCAGTTTGCAAGCCTGGC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCGAAAGGTGTCAGCCTaGTCGAAGTCCTTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQRKVSA*SKSFRK
Trigger: CTTGCGGAAGGACTTCGACCAGGCTGACACCTTTCG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCAGAGGGTCACTCCCCTaGCACTTTCAAACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFRGSLP*HFQTGQ
Trigger: CTGCCCAGTTTGAAAGTGCCAGGGGAGTGACCCTCT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCTAAGACTTCTGATTTaGGGTCTGTGGTTTTCACGT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWLRLLI*GLWFSR
Trigger: ACGTGAAAACCACAGACCCCAAATCAGAAGTCTTAG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCAGGCAGCAGACCCCTaGGCACTAGTAGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICQAADP*ALVGEG
Trigger: ACCCTCCCCTACTAGTGCCCAGGGGTCTGCTGCCTG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGACATGGGCATACACTaGGTCAGGGTTTACAAAAGG +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKDMGIH*VRVYKR
Trigger: CCTTTTGTAAACCCTGACCCAGTGTATGCCCATGTC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCTTGGAACTTCCCCATaGATGAAACACAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSLGTSP*MKHREC
Trigger: GCACTCCCTGTGTTTCATCCATGGGGAAGTTCCAAG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGACCTATTCTTGGTTTaGGACTTTTCTTATAAGCTT +
Preference number: 4 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCDLFLV*DFSYKL
Trigger: AAGCTTATAAGAAAAGTCCCAAACCAAGAATAGGTC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGGGGGTGGTTTGCTTTaGCACCCTCACTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFGGGLL*HPHCTS
Trigger: ACTAGTGCAGTGAGGGTGCCAAAGCAAACCACCCCC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGTGGCACACATGTCATaGGCCAGGTGCAGTGCTAGG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFVAHMS*ARCSAR
Trigger: CCTAGCACTGCACCTGGCCCATGACATGTGTGCCAC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCTCTGCAGAGGTGCTaGAGTCTGCAGCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSLQRC*SLQLRP
Trigger: AGGTCTCAGCTGCAGACTCCAGCACCTCTGCAGAGA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGGAGGGGGTTGTTCCTaGTGCTGTCACTTGTACCCA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFGGGCS*CCHLYP
Trigger: TGGGTACAAGTGACAGCACCAGGAACAACCCCCTCC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGCCTCTTTGGTCACATaGCCAGATTTACCCATAATT +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWASLVT*PDLPII
Trigger: AATTATGGGTAAATCTGGCCATGTGACCAAAGAGGC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTGTAGGCTGGCTCTTTaGAGGTGGGAGCAAACTCGT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFCRLAL*RWEQTR
Trigger: ACGAGTTTGCTCCCACCTTCAAAGAGCCAGCCTACA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGCACCAGGGTGTCCTaGGCAGCGGGCTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLCTRVS*AAGFCP
Trigger: TGGACAGAAGCCCGCTGCTCAGGACACCCTGGTGCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGGAGCTCACTGTGGTTaGGCTCCAAGCACTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICGAHCG*APSTPA
Trigger: GGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGTATGGCCTGTGGGCTaGGGAAGGTTTTTATATTTT +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREVWPVG*GRFLYF
Trigger: AAAATATAAAAACCTTCCTCAGCCCACAGGCCATAC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTATGCCCAAGGGCAGGTaGAGGATGCGGACTAGGACC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICMPKGR*RMRTRT
Trigger: GGTCCTAGTCCGCATCCTTCACCTGCCCTTGGGCAT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAGACTGCTGAGGCTGTaGGCAGGAGAGAATCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFRLLRL*AGENLG
Trigger: ACCCAGATTCTCTCCTGCTCACAGCCTCAGCAGTCT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGCTGGAGTCTGCAGCTaGGACCTGTGGGTTGATTCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFAGVCS*DLWVDS
Trigger: AGAATCAACCCACAGGTCTCAGCTGCAGACTCCAGC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATGGAAGCAATTGATTTaGCTGCCTCTTTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREWKQLI*LPLWSH
Trigger: ATGTGACCAAAGAGGCAGTCAAATCAATTGCTTCCA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTGCAAAAGGAACCGGTaGATCTTTATCCAGGGCTAC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSCKRNR*IFIQGY
Trigger: GTAGCCCTGGATAAAGATGCACCGGTTCCTTTTGCA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAAGCCGGACGCCAGTTaGGGTAGCGGATGTGATGTA +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFKPDAS*GSGCDV
Trigger: TACATCACATCCGCTACCGCAACTGGCGTCCGGCTT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCATTCTGCCCATGTCTaGCTCTGCCCATCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFHSAHV*LCPSLP
Trigger: AGGAAGGGATGGGCAGAGGCAGACATGGGCAGAATG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGCCCTAATTCTTGCCTaGTATTCTCTTGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKALILA*YSLGHK
Trigger: TTTGTGGCCAAGAGAATAGCAGGCAAGAATTAGGGC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCCAGCTCTGTGCCTGTaGCAAACCAATTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQPALCL*QTNWCE
Trigger: CTCACACCAATTGGTTTGGCACAGGCACAGAGCTGG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCATTATTCATCTTTGCTaGCCTAGCCATGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSIIHLC*PSHGPP
Trigger: AGGTGGCCCATGGCTAGGGCAGCAAAGATGAATAAT...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAAGATGACCAATGCCTaGCAACCCAGCGGATTCATT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGKMTNA*QPSGFI
Trigger: AATGAATCCGCTGGGTTGGCAGGCATTGGTCATCTT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAATATTCAGGGAAATATTaGCTACTTCCCTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREYSGKY*LLPWRA
Trigger: AGCTCTCCAGGGAAGTAGGCAATATTTCCCTGAATA...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAAATTGTGATGCTGCATaGCCCAGTCTCATTACAAAC +
Preference number: 4 (lower is better)
Translates to: WAIQEDSEKTAEAVSRRENCDAA*PSLITN
Trigger: GTTTGTAATGAGACTGGGGCATGCAGCATCACAATT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCTTCTCTGCAGAGGTaGTGGAGTCTGCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPSLQR*WSLQLR
Trigger: TCTCAGCTGCAGACTCCAGCACCTCTGCAGAGAAGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTTTGCCTGCCTTCTCTaGAGAGGTGCTGGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFFACLL*RGAGVC
Trigger: GCAGACTCCAGCACCTCTGCAGAGAAGGCAGGCAAA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTTTTCTTCAACCTCCTaGCCACCCTGTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFFSSTS*PPCPAQ
Trigger: CTGAGCTGGACAGGGTGGGCAGGAGGTTGAAGAAAA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCAGGGCTACCAGTGGTaGGTCCAAAATGACTGTGTC +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQQGYQW*VQNDCV
Trigger: GACACAGTCATTTTGGACCCACCACTGGTAGCCCTG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTGCCATTTCTGTCGATaGCAAAAGGCACATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGCHFCR*QKAHLW
Trigger: CCACAGATGTGCCTTTTGCCATCGACAGAAATGGCA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGTTGGTCACCAGGTATaGTTCATATGTTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKVGHQV*FICCSI
Trigger: GATGGAGCAACATATGAACCATACCTGGTGACCAAC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCATGGCTATGTGAGATaGATGAATGGGCCAGTCGTT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSHGYVR*MNGPVV
Trigger: AACGACTGGCCCATTCATCCATCTCACATAGCCATG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGAACTGAGCAAACTGTaGTTTGGTGACTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGELSKL*FGDFSS
Trigger: GGAGGAGAAGTCACCAAACCACAGTTTGCTCAGTTC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCGGGGGCTTCGGTTTTaGCGAAGGTGCTCACAATCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFRGLRF*RRCSQS
Trigger: AGATTGTGAGCACCTTCGCCAAAACCGAAGCCCCCG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTACAAAAGGGACATGTaGGCCAGGCAGCAGACCCCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFYKRDM*ARQQTP
Trigger: AGGGGTCTGCTGCCTGGCCCACATGTCCCTTTTGTA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAGGAGGAGTGAAGGATaGGGACAGAGCATACACATT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGRRSEG*GQSIHI
Trigger: AATGTGTATGCTCTGTCCCCATCCTTCACTCCTCCT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTATCCTGCACCAGGAGTaGAAGTTGGGGAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFILHQE*KLGRLV
Trigger: GACCAGTCTCCCCAACTTCCACTCCTGGTGCAGGAT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGGTTGGTTGAATCCATaGATTTGGAAACCTCAGATA +
Preference number: 4 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWGWLNP*IWKPQI
Trigger: TATCTGAGGTTTCCAAATCCATGGATTCAACCAACC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATGGGCCAAATCTAGCTaGCTGCTAATTTTCGTATGG +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKWAKSS*LLIFVW
Trigger: CCATACGAAAATTAGCAGCCAGCTAGATTTGGCCCA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CTAAGACCTTACGTGTGTGAAGTTCAACCACCCTCCTaGTATGAAGCAACCTGGAGTCAGCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: LRPYVCEVQPPS*YEATWSQHRRT
Trigger: GGTTCTCCTATGCTGACTCCAGGTTGCTTCATACAAGGAGGGTGGTTGAACTTCACACACGTAAGGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CAAAGCTTCTGTTACTGGGATATAACCACTCCCGTCTaGTTCTCATCCATGGTGAGGAAGAGGGTGTTGCGA +
Preference number: 4 (lower is better)
Translates to: QSFCYWDITTPV*FSSMVRKRVLR
Trigger: TCGCAACACCCTCTTCCTCACCATGGATGAGAACAAGACGGGAGTGGTTATATCCCAGTAACAGAAGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp TTTTCAAGCTCAGGAAGGCAGAATCTGGTTGTCCACTaGGCAAGACAAGCAATGAACTGGGCTGTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: FSSSGRQNLVVH*ARQAMNWAVAK
Trigger: TTTGGCCACAGCCCAGTTCATTGCTTGTCTTGCCAAGTGGACAACCAGATTCTGCCTTCCTGAGCTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAAGGCACATCTGTGGTaGCGATTTCATAGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGKAHLW*RFHSCR
Trigger: TCTGCAACTATGAAATCGTCACCACAGATGTGCCTT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCAAACTGTGGTTTGGTaGCTTCTCCTCCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQQTVVW*LLLLAN
Trigger: GTTGGCAAGGAGGAGAAGTCACCAAACCACAGTTTG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTGGACTGCGAGGGGTTaGAGTGATACTTTATTCCTT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSWTARG*SDTLFL
Trigger: AAGGAATAAAGTATCACTTCAACCCCTCGCAGTCCA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCCCTGCTTGATAGGATaGTTGAGTAAATTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKPCLIG*LSKFKK
Trigger: TTTCTTGAATTTACTCAATCATCCTATCAAGCAGGG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCTGTCCCCAAAGTCCTaGCTGCTCGTGCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICLSPKS*LLVHSF
Trigger: GAAGCTGTGCACGAGCAGTCAGGACTTTGGGGACAG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGCTTTCATCCATAAGTaGACTGAGTCAGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKAFIHK*TESALI
Trigger: AATCAAGGCTGACTCAGTTCACTTATGGATGAAAGC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAAAGCAATTCAGTGTTTaGATTGTGATGCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKKQFSV*IVMLHA
Trigger: GGCATGCAGCATCACAATTCAAACACTGAATTGCTT...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTAGGTGTACACGACTaGCAAAGTACCAGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGLGVHD*QSTSKF
Trigger: GAACTTGCTGGTACTTTGTCAGTCGTGTACACCTAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGACTACTGAGTCTCTATaGAGGAGTGATAAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGTTESL*RSDKLG
Trigger: ACCCAGCTTATCACTCCTTCATAGAGACTCAGTAGT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGGCAACCTTGTTGACTaGGAAGACAGTGCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFGNLVD*EDSALF
Trigger: GAAGAGCGCACTGTCTTCTCAGTCAACAAGGTTGCC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTGCTGTCATAGATCTTaGCCTCCGTCACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFCCHRS*PPSQQP
Trigger: AGGCTGTTGTGACGGAGGGCAAGATCTATGACAGCA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGCCTGGCTCCATTCTaGCCATGTCTGCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLCLAPF*PCLPLP
Trigger: GGGCAGAGGCAGACATGGGCAGAATGGAGCCAGGCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCAAATTATTCATCTTTaGTGCCCTAGCCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSQIIHL*CPSHGP
Trigger: TGGCCCATGGCTAGGGCAGCAAAGATGAATAATTTG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTATTGTCTGTTTTCATaGTACAATAGGAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKYCLFS*YNRRAE
Trigger: CTCAGCTCTCCTATTGTAGCATGAAAACAGACAATA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGAGAGCTCCTCAGTCTaGCTCAGTGATGCATATCAG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQESSSV*LSDAYQ
Trigger: CTGATATGCATCACTGAGGCAGACTGAGGAGCTCTC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATTGGCCAGGATGGATaGACTTTTGCCACCAAGGGT +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQIGQDG*TFATKG
Trigger: ACCCTTGGTGGCAAAAGTGCATCCATCCTGGCCAAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCCACACATCAGCCATaGTCTTGCAGCCATGTAGAG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPTHQP*SCSHVE
Trigger: CTCTACATGGCTGCAAGAGCATGGCTGATGTGTGGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCAAACTCCTACTATGTaGCAAGCACTATTCCCACTG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGQTPTM*QALFPL
Trigger: CAGTGGGAATAGTGCTTGGCACATAGTAGGAGTTTG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTTCCAGGCTGTCTCGTaGGGCCCAGCACCACAGTCA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLFQAVS*GPAPQS
Trigger: TGACTGTGGTGCTGGGCCCCACGAGACAGCCTGGAA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCCTTCACCTGTATATaGACCACGGCCTTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSFTCI*TTALCD
Trigger: GTCACACAAGGCCGTGGTCCATATACAGGTGAAGGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTCCCATCGGGGACTTTaGCACCCTGCCTGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLSHRGL*HPACRQ
Trigger: TTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCAGGAGATCACCTTCTaGCTTTCCATTTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQQEITF*LSILPG
Trigger: CCCTGGCAAAATGGAAAGCCAGAAGGTGATCTCCTG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCATGCTGGGCTTCTTaGAACTTCCCCATGGATGAA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPCWAS*NFPMDE
Trigger: TTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGATCAGACCCTGCTTGTaGCCAAGGACCTATTCTTGG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQIRPCL*PRTYSW
Trigger: CCAAGAATAGGTCCTTGGCCACAAGCAGGGTCTGAT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGGCAGGGTAGCTGCATaGTTGCAGCAGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLGRVAA*LQQVPR
Trigger: TCTGGGCACCTGCTGCAACCATGCAGCTACCCTGCC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCTGGATGCCAGCATATaGAGGGTGGAAAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLDASI*RVENAR
Trigger: TCTGGCATTTTCCACCCTCCATATGCTGGCATCCAG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGGAGGCAAAGACTACTaGGTAGTTGGTGAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFGGKDY*VVGERL
Trigger: AAGCCTCTCACCAACTACCCAGTAGTCTTTGCCTCC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCACTCTGCCAGGCCCTaGGTGTCTCCACCAGCATAC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLHSARP*VSPPAY
Trigger: GTATGCTGGTGGAGACACCCAGGGCCTGGCAGAGTG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCTATATTGGCCAGGATaGATGCACTTTTGCCACCAA +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSLYWPG*MHFCHQ
Trigger: TTGGTGGCAAAAGTGCATCCATCCTGGCCAATATAG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCACCGAGGTCAGACTaGATGCAGTCAGTTGGATTG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPPRSD*MQSVGL
Trigger: CAATCCAACTGACTGCATCCAGTCTGACCTCGGTGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCATCAACAACCCTTTATaGAAACCACCGAGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSINNPL*KPPRSD
Trigger: GTCTGACCTCGGTGGTTTCCATAAAGGGTTGTTGAT...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATCTATACTCACCAACTaGTTTTCTTCAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKSILTN*FSSTSC
Trigger: GCAGGAGGTTGAAGAAAACCAGTTGGTGAGTATAGA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAAGAGGGAGTGTGGCTaGATGCATTTCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQKRECG*MHFSVA
Trigger: AGCCACAGAGAAATGCATCCAGCCACACTCCCTCTT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCAAGACCTTACGTGTGTaGAGTTCAACCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFKTLRV*SSTTLL
Trigger: AAGGAGGGTGGTTGAACTTCACACACGTAAGGTCTT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATGGGTTTTAAGCATATaGAGTGTTCTTTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKWVLSI*SVLFAA
Trigger: GGCAGCAAAAAGAACACTTCATATGCTTAAAACCCA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAGGACCAAGGTTCCTTaGAACCACTGCTTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFRTKVP*NHCFSE
Trigger: CTCACTGAAGCAGTGGTTTCAAGGAACCTTGGTCCT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTCACTGAGGTCAAGTaGTCTCTGGGATTCAATTCA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGFTEVK*SLGFNS
Trigger: TGAATTGAATCCCAGAGATCACTTGACCTCAGTGAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTTTACAAAGGACCTTaGCTCACAAACCGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGFYKGP*LTNREG
Trigger: TCCTTCTCGGTTTGTGAGTCAAGGTCCTTTGTAAAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCGTTTCTGTTGTCTGTaGTTAATACACACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSRFCCL*LIHTVC
Trigger: GCAGACAGTGTGTATTAATCACAGACAACAGAAACG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATTGAGTGATCAGCCCTaGCTTTCAAGTCTAAATTTC +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKLSDQP*LSSLNF
Trigger: GAAATTTAGACTTGAAAGTCAGGGCTGATCACTCAA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCGATCCATGGCTTGTaGTTATTGACTTTAGCCGCG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSIHGL*LLTLAA
Trigger: CGCGGCTAAAGTCAATAAGCACAAGCCATGGATCGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTGTCGTCAGAGCCACTaGTGGAGCTCATTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFCRQSH*WSSFLP
Trigger: AGGAAGAAATGAGCTCCAGCAGTGGCTCTGACGACA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAAAGTTGAAAAGACCTaGCATGGGTCCTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFKVEKT*HGSSLG
Trigger: ACCCAGGGAGGACCCATGGCAGGTCTTTTCAACTTT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAAAAGGAAGGAACAGATaGAGAAAACACTTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKKGRNR*RKHFRR
Trigger: CCTCCTAAAGTGTTTTCTGCATCTGTTCCTTCCTTT...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGAAGTGTTCTTTTTGCTaGCACAATTTTGGGAGAATT +
Preference number: 4 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKKCSFC*HNFGRI
Trigger: AATTCTCCCAAAATTGTGGCAGCAAAAAGAACACTT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGATAATGAACACTCCTaGTCAGAGATCATTATGGGC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGDNEHS*SEIIMG
Trigger: GCCCATAATGATCTCTGAGCAGGAGTGTTCATTATC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGACCAGGGTCACTGCTaGAGTTTCAGTGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFDQGHC*SFSVSP
Trigger: TGGAGAAACACTGAAACTGCAGCAGTGACCCTGGTC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCAGTGACCAGGGTCACTaGTGCAGTTTCAGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSDQGH*CSFSVS
Trigger: AGAAACACTGAAACTGCAGCAGTGACCCTGGTCACT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCCTCTGGGGAGGTGTTaGCTCAATGGTCCAGAGGTA +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICPLGRC*LNGPEV
Trigger: TACCTCTGGACCATTGAGGCAACACCTCCCCAGAGG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATTCTGTTCTGAAATGTaGAGTAAAAAGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKFCSEM*SKKGPG
Trigger: ACCTGGACCCTTTTTACTGCACATTTCAGAACAGAA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCAACTCACAGTCAATaGGGCTCTTGGCACGGAGCC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLATHSQ*GSWHGA
Trigger: GGCTCCGTGCCAAGAGCCCCATTGACTGTGAGTTGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCCAGGTGTCGTTGGTaGAGCTCACTGTGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSRCRW*SSLWLS
Trigger: GCTCAACCACAGTGAGCTCCACCAACGACACCTGGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCGTCAGAGCCACTGCTaGAGCTCATTTCTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICRQSHC*SSFLPR
Trigger: CCGAGGAAGAAATGAGCTCCAGCAGTGGCTCTGACG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCATTACCCTGCTCACCTaGATACCTCCCAAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFITLLT*IPPKAS
Trigger: AGAAGCTTTGGGAGGTATCCAGGTGAGCAGGGTAAT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTTTCGTATGGCCTGTaGGCTGAGGAAGGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGFSYGL*AEEGFY
Trigger: ATAAAAACCTTCCTCAGCCCACAGGCCATACGAAAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGGCTTTCAACTCTCGTaGAATATCTGTCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSGFQLS*NICQFV
Trigger: GACAAACTGACAGATATTCCACGAGAGTTGAAAGCC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAAACAGGGGTGTCTTTaGGCCATTCAGGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFKQGCL*AIQEDS
Trigger: AGAGTCCTCCTGAATGGCCCAAAGACACCCCTGTTT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTTTTCTCTCCTCAGTTaGGATGCTGCCCATGACCTC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFFSLLS*DAAHDL
Trigger: GAGGTCATGGGCAGCATCCCAACTGAGGAGAGAAAA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGTGGTGGGTCCAAAATaGCTGTGTCATTGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFVVGPK*LCHCSQ
Trigger: CTGAGAACAATGACACAGTCATTTTGGACCCACCAC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCTTTGTCACAAATCTaGTCCAGCTTCCAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSLSQI*SSFQWN
Trigger: GTTCCACTGGAAGCTGGATCAGATTTGTGACAAAGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAACAAGCGCCGACTGTaGGTTGCATGGCTATGTGAG +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICNKRRL*VAWLCE
Trigger: CTCACATAGCCATGCAACTCACAGTCGGCGCTTGTT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGACCCAGTCCCTTCACTaGGGTCAAGTGATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLTQSLH*GQVISG
Trigger: CCCAGAGATCACTTGACCTCAGTGAAGGGACTGGGT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTCCTATCTTACTTTTTaGGTGATCAGCCCTGACTTT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSSYLTF*VISPDF
Trigger: AAAGTCAGGGCTGATCACTCAAAAAGTAAGATAGGA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGACCTTCAAACAGCTCTaGCTTTGGAAGCAATTGATT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGTFKQL*LWKQLI
Trigger: AATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTGCAGTCAGTTGGATTaGTTCATCATGACTAGTTCA +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSCSQLD*FIMTSS
Trigger: TGAACTAGTCATGATGAATCAATCCAACTGACTGCA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCTGGGCAACCTTGTTaGCTGAGAAGACAGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLAGQPC*LRRQCA
Trigger: AGCGCACTGTCTTCTCAGTCAACAAGGTTGCCCAGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCTTGCCAGCCAGGCTTaGAAACTGGCTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICLASQA*KLASHP
Trigger: TGGATGTGAAGCCAGTTTGCAAGCCTGGCTGGCAAG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGTCCAGCCCTTCCTTaGAGGCCTGCAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELCPALP*RPAGRR
Trigger: TCTCCTGCCTGCAGGCCTGCAAGGAAGGGCTGGACA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCTCTTCACAGGTTGTaGATGTTAGGATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSLHRL*MLGWRW
Trigger: CCATCTCCATCCTAACATGCACAACCTGTGAAGAGA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCAGCTATTGGTAGGATaGTTAGCACATAGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSQLLVG*LAHSRF
Trigger: AAACCTACTATGTGCTAAGCATCCTACCAATAGCTG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCATCTGTTTACTACCTaGATACAGGGAATATCTGTC +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSHLFTT*IQGISV
Trigger: GACAGATATTCCCTGTATGCAGGTAGTAAACAGATG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCCCCAAAGTCCTGACTaGTCGTGCACAGCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLPQSPD*SCTASN
Trigger: GTTGGAAGCTGTGCACGAGCAGTCAGGACTTTGGGG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTGGGGCCCAAGAATATaGACTTCTCACATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFWGPRI*TSHMFP
Trigger: TGGGAACATGTGAGAAGTGCATATTCTTGGGCCCCA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGCAGGAATTGTCTCATaGCCAAGGGCAGGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICAGIVS*PRAGEG
Trigger: TCCTTCACCTGCCCTTGGGCATGAGACAATTCCTGC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGGATGGATGCACTTTTaGCACCAAGGGTGGATGAGC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICGWMHF*HQGWMS
Trigger: GCTCATCCACCCTTGGTGGCAAAAGTGCATCCATCC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCAAAGGGCAGCTCCTaGCCATGGATCTTGAACGCA +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSKGSS*PWILNA
Trigger: TGCGTTCAAGATCCATGGCCAGGAGCTGCCCTTTGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCTTCCCCAAAGCACTaGACTTTGGAGGATACTTTG +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSSPKH*TLEDTL
Trigger: CAAAGTATCCTCCAAAGTCCAGTGCTTTGGGGAAGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGGTGGAGCTCACTGTaGTTGAGCTCCAAGCACTCC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLWWSSL*LSSKHS
Trigger: GGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATCTTATAAGCTTATATaGCCTCAGAAAGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKSYKLI*PQKEAR
Trigger: CCTTGCTTCTTTCTGAGGCCATATAAGCTTATAAGA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGATTTCCAGGTCCACCTaGCTGCTGTTTATATTTAAG +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGISRST*LLFIFK
Trigger: CTTAAATATAAACAGCAGCCAGGTGGACCTGGAAAT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGGAGGTGGGTGGGCGTaGGCTCCAGATGTGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELGGGWA*APDVSV
Trigger: AACACTCACATCTGGAGCCCACGCCCACCCACCTCC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTCCAACACTTTTAAATaGCGGTGGCAGCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFSNTFK*RWQLQT
Trigger: TGTCTGGAGCTGCCACCGCCATTTAAAAGTGTTGGA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTaGACTGCCTCTTTGGTCACATGGCCAGATTTACCC +
Preference number: 4 (lower is better)
Translates to: HLQTALTLEAID*TASLVTWPDLP
Trigger: GGGTAAATCTGGCCATGTGACCAAAGAGGCAGTCAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCATTGTTCTCAGTTATaGCTCCATGATATGAAGTCT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSHCSQL*LHDMKS
Trigger: AGACTTCATATCATGGAGTCATAACTGAGAACAATG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCATGAATCAGAAAGTTaGAAAGACCTGCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFHESES*KDLPWV
Trigger: GACCCATGGCAGGTCTTTTCAACTTTCTGATTCATG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTGGAAAATGCCAGACTaGTTAATGACACCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGWKMPD*LMTPFS
Trigger: AGAAAAAGGTGTCATTAATCAGTCTGGCATTTTCCA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAATAAAGACAGGAAATaGGGGTACTGGGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQNKDRK*GYWGRL
Trigger: AAGTCTACCCCAGTACCCTCATTTCCTGTCTTTATT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCAGCCTTGATTGGAATTaGGGAATATTCAGGGAAATA +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSSLDWN*GIFREI
Trigger: TATTTCCCTGAATATTCCTCAATTCCAATCAAGGCT...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGGGACCACTGAACTGTaGTGGATGCTACTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELGTTEL*WMLLRD
Trigger: GTCCCGGAGTAGCATCCAGCACAGTTCAGTGGTCCC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTTTGCATATAGCCTATaGACAACTTCCTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSFAYSL*TTSCVL
Trigger: AAGAACACAGGAAGTTGTGCATAGGCTATATGCAAA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAAACAAACAGAGCAGTaGTGCGGCAACCTGGCAACG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLKQTEQ*CGNLAT
Trigger: CGTTGCCAGGTTGCCGCAGCACTGCTCTGTTTGTTT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCTACCCCTGCTCCTTaGTTAGGGGCTCCATTTACT +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSTPAP*LGAPFT
Trigger: AGTAAATGGAGCCCCTAAGCAAGGAGCAGGGGTAGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTCATCCCACTCCAGCTaGGCTTGCCTGGCTCCATTC +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELSSHSS*ACLAPF
Trigger: GAATGGAGCCAGGCAAGCCCAGCTGGAGTGGGATGA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCCAAGGACCTATTCTTaGTTTGGGACTTTTCTTATA +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGPRTYS*FGTFLI
Trigger: TATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCAAAGCTTCTGTTACTaGGATATAACCACTCCCGTC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFQSFCY*DITTPV
Trigger: GACGGGAGTGGTTATATCCCAGTAACAGAAGCTTTG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCAACTCATTCTGCACTaGGATTTAAGCATTTCAATC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGQLILH*DLSISI
Trigger: GATTGAAATGCTTAAATCCCAGTGCAGAATGAGTTG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGCCAAGAGCTCCTCATaGTCAGGGAAACATGCCTTG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLAKSSS*SGKHAL
Trigger: CAAGGCATGTTTCCCTGACCATGAGGAGCTCTTGGC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTATTGCCTACTTCCCTaGAGAGCTCCTCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLYCLLP*RAPQSA
Trigger: GGCAGACTGAGGAGCTCTCCAGGGAAGTAGGCAATA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCTTTCAAAGGTCTGTaGACCTTCACAGAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPFKGL*TFTEFK
Trigger: CTTAAACTCTGTGAAGGTCCACAGACCTTTGAAAGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAGGTCAAGTGATCTCTaGGATTCAATTCAATTCAAC +
Preference number: 4 (lower is better)
Translates to: SLNHRLPASRASHSVGLGRSSDL*DSIQFN
Trigger: GTTGAATTGAATTGAATCCCAGAGATCACTTGACCT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAGAGCAGCACAAGGCTaGGTCATTAACAAATTAGGG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFRAAQG*VINKLG
Trigger: CCCTAATTTGTTAATGACCCAGCCTTGTGCTGCTCT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGTGAGTGTTCTATATTaGCCAGGATGGATGCACTTT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFVSVLY*PGWMHF
Trigger: AAAGTGCATCCATCCTGGCCAATATAGAACACTCAC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCACACCACCTAAAGTTTaGCTAGTGAACATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFTPPKV*LVNMSR
Trigger: TCTGCTCATGTTCACTAGCCAAACTTTAGGTGGTGT...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGGATGCATTTCTCTGTaGCTCATTCAATTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQGCISL*LIQFGV
Trigger: TACCCCAAATTGAATGAGCCACAGAGAAATGCATCC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCAGTTATGACTCCATaGTATGAAGTCTCGATCCAT +
Preference number: 4 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSVMTP*YEVSIH
Trigger: ATGGATCGAGACTTCATATCATGGAGTCATAACTGA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGAGCTTGAGGAGGAGTaGAGGATGGGGACAGAGCAT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELELEEE*RMGTEH
Trigger: ATGCTCTGTCCCCATCCTTCACTCCTCCTCAAGCTC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTCCAGATCGAAAAGACTaGGCAAAGAGAAAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFPDRKD*AKRKVF
Trigger: GAACACTTTTCTCTTTGCTCAGTCTTTTCGATCTGG...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTTTTTGGTATCTAGATaGATTTGGGCCTTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFFLVSR*IWALAV
Trigger: CACAGCCAAGGCCCAAATTCATCTAGATACCAAAAA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCCTTATGAATCCTTCTaGAGAGGAGATGCTACCTCC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICPYESF*RGDATS
Trigger: GGAGGTAGCATCTCCTCTTCAGAAGGATTCATAAGG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGATGAAACACAGGGAGTaGCCAAGGCTTAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLMKHRE*PRLKGW
Trigger: CCACCCTTTAAGCCTTGGGCACTCCCTGTGTTTCAT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTTTGGGCCTTGGCTGTaGTTACAGCATTTGATCAAA +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFFGPWL*LQHLIK
Trigger: TTTGATCAAATGCTGTAAGCACAGCCAAGGCCCAAA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGACCACATCATTCAACTaGATGTTCTCATGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLTTSFN*MFSWGR
Trigger: CCGCCCCCATGAGAACATGCAGTTGAATGATGTGGT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCTTCTGAAGAGGAGATaGTACCTCCTCATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICLLKRR*YLLIPL
Trigger: CAAAGGGATGAGGAGGTAGCATCTCCTCTTCAGAAG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTTTTGCAAACTTGGATaGATCTTTAGATACAGAGCA +
Preference number: 4 (lower is better)
Translates to: WMSLYINIHDPQAQARPSFCKLG*IFRYRA
Trigger: TGCTCTGTATCTAAAGATGCATCCAAGTTTGCAAAA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCTTACCTTAAGGAGGTaGCCATATCAGCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLTLRR*PYQQRQ
Trigger: CTGCCTCTGCTGATATGGCCACCTCCTTAAGGTAAG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTACACTGTCTGCATTTTaGCTCTTCTCAAGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFTLSAF*LFSSLL
Trigger: CAACAGACTTGAGAAGAGCCAAAATGCAGACAGTGT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp ATGAACATAAGTAGAATCCTGCACCAGGAGTGGAAGTaGGGGAGACTGGTCTTGTCTATACTTTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: MNISRILHQEWK*GRLVLSILLND
Trigger: GTCATTCAAAAGTATAGACAAGACCAGTCTCCCCAACTTCCACTCCTGGTGCAGGATTCTACTTATGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGGCAAGACAAGCAATaGACTGGGCTGTGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELWQDKQ*TGLWPN
Trigger: GTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGCCA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGCTCCCTGGGATGGAATaGAGCCTGGCTCTTAATCCA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELLPGME*SLALNP
Trigger: TGGATTAAGAGCCAGGCTTCATTCCATCCCAGGGAG...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGATTACACCTGTCATCTaGCTTAGGGTGGGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLITPVI*LRVGSC
Trigger: ACAGCTACCCACCCTAAGTCAGATGACAGGTGTAAT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAAGAGCTCAGAAGTCTaGTACATGTCAGGTACACAC +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICKSSEV*YMSGTH
Trigger: GTGTGTACCTGACATGTATCAGACTTCTGAGCTCTT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCCAGGTCCACCTGGCTaGTGTTTATATTTAAGGACT +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICPGPPG*CLYLRT
Trigger: AGTCCTTAAATATAAACAGCAGCCAGGTGGACCTGG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGAACAGCCTTGTAGGCTaGCTCTTTGAAGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELNSLVG*LFEGGS
Trigger: GCTCCCACCTTCAAAGAGCCAGCCTACAAGGCTGTT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAACTTAGGGCAGAAGTaGAGGCTACAGGACAAAGTC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLNLGQK*RLQDKV
Trigger: GACTTTGTCCTGTAGCCTCCACTTCTGCCCTAAGTT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGCTTGTTGTGTTGTCCTaGGGCAGTGCCTGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELLVVLS*GSACVE
Trigger: TTCCACACAGGCACTGCCCCAGGACAACACAACAAG...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGCCAAACTTTGGCCTTaGGCCAAATCTAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELAKLWP*AKSSWL
Trigger: CAGCCAGCTAGATTTGGCCCAAGGCCAAAGTTTGGC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTATTTCGAAGTGTGCTTaGTCGGGCTTTCTACTGATG +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICISKCA*SGFLLM
Trigger: CATCAGTAGAAAGCCCGACCAAGCACACTTCGAAAT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTTTTGCCACCAAGGGTaGATGAGCCTTTATATTAAC +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFFCHQG*MSLYIN
Trigger: GTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CATAGAGCCAAGAAGATTGCTAATTTCGAAGTGTGCTaGGTCGGGCTTTCTACTGATGATGTTGCTATTGAT +
Preference number: 4 (lower is better)
Translates to: HRAKKIANFEVC*VGLSTDDVAID
Trigger: ATCAATAGCAACATCATCAGTAGAAAGCCCGACCAAGCACACTTCGAAATTAGCAATCTTCTTGGCTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTaGGAAGCAATTGATTTGACTGCCTCTTTGGTCACA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALT*EAIDLTASLVT
Trigger: TGTGACCAAAGAGGCAGTCAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCATTTCGGTTTTGTCTaGGTTGCAGAGGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLHFGFV*VAEDGF
Trigger: GAAACCATCCTCTGCAACTCAGACAAAACCGAAATG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGAGACTTGGTCTTCATaGAGGATGCTGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELETWSS*RMLTSK
Trigger: CTTGGAGGTCAGCATCCTTCATGAAGACCAAGTCTC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCTGACATGCAGAGAATaGCCTCTTATAGCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLTCRE*PLIARV
Trigger: AACTCTGGCTATAAGAGGTCATTCTCTGCATGTCAG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGACTTGGTGGAGCTCGTaGGTTTCTAATACATGCAGA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLTWWSS*VSNTCR
Trigger: TCTGCATGTATTAGAAACGCACGAGCTCCACCAAGT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTACACTGAACATAGCTaGAAACACAGACTCCCATCT +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICYTEHS*KHRLPS
Trigger: AGATGGGAGTCTGTGTTTGCAGCTATGTTCAGTGTA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGAATGGGCCAGTCGTTaGTCACCAGGTATGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELEWASR*SPGMVH
Trigger: ATGAACCATACCTGGTGACCAACGACTGGCCCATTC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGTGAGATGGATGAATaGGCCAGTCGTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELCEMDE*ASRWSP
Trigger: TGGTGACCAACGACTGGCCCATTCATCCATCTCACA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGCCTGCTATTCTCTTaGCCACAAAAGATCACAGAC +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLCLLFS*PQKITD
Trigger: GTCTGTGATCTTTTGTGGCCAAGAGAATAGCAGGCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGGGATCAGAATATCTaGGGGAGGGCAAGCCACATT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELWDQNI*GRASHI
Trigger: AATGTGGCTTGCCCTCCCCCAGATATTCTGATCCCA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCAATTCAACATTTGTaGCACACATGTCATGGGCCA +
Preference number: 4 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSIQHL*HTCHGP
Trigger: TGGCCCATGACATGTGTGCCACAAATGTTGAATTGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGCTTCTCAGTGTTCCTaGTGTTGCCATTTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELASQCS*CCHFCR
Trigger: TCGACAGAAATGGCAACATCAGGAACACTGAGAAGC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGCGAGGGGTTGAAGTaGTACTTTATTCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELCEGLK*YFIPWP
Trigger: TGGCCAAGGAATAAAGTATCACTTCAACCCCTCGCA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGCTCTAGGCTTGTTGTaGCTGTCCTTGTTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELALGLL*LSLLCV
Trigger: AACACACAACAAGGACAGTCACAACAAGCCTAGAGC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTGCGTTTCTAATACATaGAGAAAGCGTGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFCVSNT*RKRVFS
Trigger: AGAAAATACACGCTTTCTGCATGTATTAGAAACGCA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTTAGATACAGAGCAATaGTTTGGCATCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELLDTEQ*FGIWGR
Trigger: CCTCCCCCAGATGCCAAAGCATTGCTCTGTATCTAA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTTGCTGCCACAATTTTaGGAGAATTCAGTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLLPQF*ENSVAP
Trigger: AGGAGCAACTGAATTCTCCCAAAATTGTGGCAGCAA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTTTCTCCACAAAATATaGCCCTCGAAGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELFLHKI*PSKRLL
Trigger: GAGCAGCCTCTTCGAGGGCCATATTTTGTGGAGAAA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGAACAAAGGCAAACTCTaGAGACAGGTAGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELNKGKL*RQVVRM
Trigger: CATCCTGACTACCTGTCTGCAGAGTTTGCCTTTGTT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTTGTATGAAGCAACCTaGAGTCAGCATAGGAGAACC +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELLYEAT*SQHRRT
Trigger: GGTTCTCCTATGCTGACTCCAGGTTGCTTCATACAA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAAACACTTTAGGAGGTaGGAAAAGCTTCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLKHFRR*EKLHKV
Trigger: AACCTTGTGAAGCTTTTCCCACCTCCTAAAGTGTTT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTCATCTGACTTAGGGTaGGTAGCTGTCAAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELSSDLG*VAVKAS
Trigger: ACTTGCTTTGACAGCTACCCACCCTAAGTCAGATGA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAGAGGCAGCAATAGTTaGAGATCTATACTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLRGSNS*RSILVS
Trigger: TGAGACTAGTATAGATCTCCAACTATTGCTGCCTCT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp AAGTCTGTTGCCCTCTTTTCATTAGTCTACTGGGAATaGAACTTCATGTTGATGAATCTGCTCTGCAGTAAA +
Preference number: 4 (lower is better)
Translates to: KSVALFSLVYWE*NFMLMNLLCSK
Trigger: TTTACTGCAGAGCAGATTCATCAACATGAAGTTCAATTCCCAGTAGACTAATGAAAAGAGGGCAACAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGCTCATTTCTTTTGCCTaGAGCTGGACAATGGAAAGT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELLISFA*SWTMES
Trigger: ACTTTCCATTGTCCAGCTGCAGGCAAAAGAAATGAG...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTTGATGAATCTGCTCTaGAGTAAATCTGATGAAAGG +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLLMNLL*SKSDER
Trigger: CCTTTCATCAGATTTACTGCAGAGCAGATTCATCAA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGAAAGGGCTATTTGGTTaGGAGAATTCCCAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELKGLFG*ENSQEK
Trigger: TTTCTCCTGGGAATTCTCCCAACCAAATAGCCCTTT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp TCCAAGGCTTTCAACTCTCGTGGAATATCTGTCAGTTaGTCAGTTCAGCAAATAACAAGTGTTTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SKAFNSRGISVS*SVQQITSVLFV
Trigger: AACAAACAAAACACTTGTTATTTGCTGAACTGACAAACTGACAGATATTCCACGAGAGTTGAAAGCCTTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
3UTR CAA 72 bp CTCTTTTCATTAGTCTACTGGGAATTGAACTTCATGTaGATGAATCTGCTCTGCAGTAAATCTGATGAAAGG +
Preference number: 4 (lower is better)
Translates to: LFSLVYWELNFM*MNLLCSKSDER
Trigger: CCTTTCATCAGATTTACTGCAGAGCAGATTCATCAACATGAAGTTCAATTCCCAGTAGACTAATGAAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTCAGTTGCTCCTAAATaGCCAACTAAAGATCTTTTT +
Preference number: 4 (lower is better)
Translates to: QLRADHLQTALTLEAIDLSVAPK*PTKDLF
Trigger: AAAAAGATCTTTAGTTGGGCATTTAGGAGCAACTGA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR TCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTTACAGATAGTTTGCTaGCACCTGACATATAGGAAT +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELLQIVC*HLTYRN
Trigger: ATTCCTATATGTCAGGTGTCAGCAAACTATCTGTAA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR GCA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGTTTATTTCCCGTCTaGAAATATAATGTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KHSFVVRIVCFHATIGELCLFPV*KYNVGK
Trigger: CTTCCCTACATTATATTTGCAGACGGGAAATAAACA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 90 bp CCCGGTGCCTGCCGCACCGTGGGCCGCCTCGCCGTGCCCGATGGGTaGGCTTCTAGCGCTGCCGCCGCGGCGCTCGGCCTCGGGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PGACRTVGRLAVPDG*ASSAAAAALGLGFP
Trigger: CGGGAACCCGAGGCCGAGCGCCGCGGCGGCAGCGCTAGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 90 bp GGCTCTCGCCTCCCGGTGCCTGCCGCACCGTGGGCCGCCTCGCCGTaGCCGATGGGTGCGCTTCTAGCGCTGCCGCCGCGGCGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GSRLPVPAAPWAASP*PMGALLALPPRRSA
Trigger: GGCCGAGCGCCGCGGCGGCAGCGCTAGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGGAGGCGAGAGCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 90 bp AGCTGCAGCCGCCGCCTACTGTCCGCGCCGGCTCTCGCCTCCCGGTaGCTGCCGCACCGTGGGCCGCCTCGCCGTGCCCGATGGGTGCGC +
Preference number: 5 (lower is better)
Translates to: SCSRRLLSAPALASR*LPHRGPPRRARWVR
Trigger: GCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGGAGGCGAGAGCCGGCGCGGACAGTAGGCGGCGGCTGCAGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 90 bp GCAGCCGCCGCCTACTGTCCGCGCCGGCTCTCGCCTCCCGGTGCCTaGCGCACCGTGGGCCGCCTCGCCGTGCCCGATGGGTGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: AAAAYCPRRLSPPGA*RTVGRLAVPDGCAS
Trigger: AGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGGAGGCGAGAGCCGGCGCGGACAGTAGGCGGCGGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 90 bp CCTACTGTCCGCGCCGGCTCTCGCCTCCCGGTGCCTGCCGCACCGTaGGCCGCCTCGCCGTGCCCGATGGGTGCGCTTCTAGCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PTVRAGSRLPVPAAP*AASPCPMGALLALP
Trigger: CGGCAGCGCTAGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGGAGGCGAGAGCCGGCGCGGACAGTAGG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 90 bp AGCACAGCCGCCCAGGCAGCATCCTCGCAGCAGCCGCCAACGAGCTaGAGCCGCCGCCTACTGTCCGCGCCGGCTCTCGCCTCCCGGTGC +
Preference number: 5 (lower is better)
Translates to: STAAQAASSQQPPTS*SRRLLSAPALASRC
Trigger: GCACCGGGAGGCGAGAGCCGGCGCGGACAGTAGGCGGCGGCTGCAGCTCGTTGGCGGCTGCTGCGAGGATGCTGCCTGGGCGGCTGTGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGCCCTGTGGTTCTGTTaGCTGAGTGCCCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCALWFC*LSAPGR
Trigger: CCTGCCAGGGGCACTCAGCAAACAGAACCACAGGGC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp CAAACTGGGCAGCAGGTCTCCAGAAGTGGTCTGTGCCCCGGAGGGTaGTCCGGGGCTCGATGGCCTGGAGGACCATCACATAGGCATCTA +
Preference number: 5 (lower is better)
Translates to: QTGQQVSRSGLCPGG*SGARWPGGPSHRHL
Trigger: TAGATGCCTATGTGATGGTCCTCCAGGCCATCGAGCCCCGGATCACCCTCCGGGGCACAGACCACTTCTGGAGACCTGCTGCCCAGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp CGTCCCAGTCCATCTCAGATTCCTTGGCAGCCTCAGTCTCCTGGATaGAGTGCTGGTGGGCGATCCGGACCCGGTACACACCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: RPSPSQIPWQPQSPG*SAGGRSGPGTHPWP
Trigger: TGGCCATGGGTGTGTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGCCAAGGAATCTGAGATGGACTGGGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTAGTCCTGCAGTCCAGTaGGTGGCAGCGCTAGGGGAT +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCSPAVQ*VAALGD
Trigger: ATCCCCTAGCGCTGCCACCAACTGGACTGCAGGACT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTACTTTGGAGGATACTTaGAGGCGCCGCACACCCGCC +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCTLEDT*RRRTPA
Trigger: GGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAGT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp CCTCAGTTGGGACCTTCCCAACTGCTGCCTCAGTTGGCCCCAGGCTaGCCAGCGTCCACTCACTGGACTTTGGAGGATACTTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: PQLGPSQLLPQLAPG*PASTHWTLEDTLRR
Trigger: GCGCCTCAAAGTATCCTCCAAAGTCCAGTGAGTGGACGCTGGTCAGCCTGGGGCCAACTGAGGCAGCAGTTGGGAAGGTCCCAACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS GCA 90 bp CAGTCCATCTCAGATTCCTTGGCAGCCTCAGTCTCCTGGATGAAGTaGTGGTGGGCGATCCGGACCCGGTACACACCCATGGCCACGACA +
Preference number: 5 (lower is better)
Translates to: QSISDSLAASVSWMK*WWAIRTRYTPMATT
Trigger: TGTCGTGGCCATGGGTGTGTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGCCAAGGAATCTGAGATGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 90 bp GAGGGAACATTCCCAAGGGACCTCAGTTGGGACCTTCCCAACTGCTaGCTCAGTTGGCCCCAGGCTGACCAGCGTCCACTCACTGGACTT +
Preference number: 5 (lower is better)
Translates to: EGTFPRDLSWDLPNC*LSWPQADQRPLTGL
Trigger: AAGTCCAGTGAGTGGACGCTGGTCAGCCTGGGGCCAACTGAGGCAGCAGTTGGGAAGGTCCCAACTGAGGTCCCTTGGGAATGTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS-3UTR CAA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGGGGGCTGGGGGTGGTTaGCTTTGGCACCCTCACTGC +
Preference number: 5 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWGAGGG*LWHPHC
Trigger: GCAGTGAGGGTGCCAAAGCAAACCACCCCCAGCCCC...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp TCCATCTCAGATTCCTTGGCAGCCTCAGTCTCCTGGATGAAGTGCTaGTGGGCGATCCGGACCCGGTACACACCCATGGCCACGACAAAC +
Preference number: 5 (lower is better)
Translates to: SISDSLAASVSWMKC*WAIRTRYTPMATTN
Trigger: GTTTGTCGTGGCCATGGGTGTGTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGCCAAGGAATCTGAGATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp GAATCGTCCCAGTCCATCTCAGATTCCTTGGCAGCCTCAGTCTCCTaGATGAAGTGCTGGTGGGCGATCCGGACCCGGTACACACCCATG +
Preference number: 5 (lower is better)
Translates to: ESSQSISDSLAASVS*MKCWWAIRTRYTPM
Trigger: CATGGGTGTGTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGCCAAGGAATCTGAGATGGACTGGGACGATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCCACTGTGGCAATGCTaGGGACCACTGAACTGTGCT +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCPLWQC*GPLNCA
Trigger: AGCACAGTTCAGTGGTCCCAAGCATTGCCACAGTGG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCAGGGGAAAGGAGAATaGGTGAATCCTGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCQGKGE*VNPGSL
Trigger: GAGGCTGCCAGGATTCACCAATTCTCCTTTCCCCTG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp GCACTGGACTTTGGAGGATACTTTGAGGCGCCGCACACCCGCCGTTaGGAACTGCCTGGAGTTGATGTAGGAGACTTTCTGGAGAGCACG +
Preference number: 5 (lower is better)
Translates to: ALDFGGYFEAPHTRR*ELPGVDVGDFLEST
Trigger: CGTGCTCTCCAGAAAGTCTCCTACATCAACTCCAGGCAGTTCCCAACGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAGTCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp GCAGTAGAATTAGTGGCATCCAGGTGTCGTTGGTGGAGCTCACTGTaGTTGAGCTCCAAGCACTCCTGCCTTGGGTCCAAGTCCCCTCCG +
Preference number: 5 (lower is better)
Translates to: AVELVASRCRWWSSL*LSSKHSCLGSKSPP
Trigger: CGGAGGGGACTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCACTAATTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp ATCTCAGATTCCTTGGCAGCCTCAGTCTCCTGGATGAAGTGCTGGTaGGCGATCCGGACCCGGTACACACCCATGGCCACGACAAACACA +
Preference number: 5 (lower is better)
Translates to: ISDSLAASVSWMKCW*AIRTRYTPMATTNT
Trigger: TGTGTTTGTCGTGGCCATGGGTGTGTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGCCAAGGAATCTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAATCCCATCGGGGACTTaGGCACCCTGCCTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREIPSGT*APCLPS
Trigger: TGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGAT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCCAATTGGTGTGAGCTaGAGGAGGAGTGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCPIGVS*RRSEGW
Trigger: CCATCCTTCACTCCTCCTCAAGCTCACACCAATTGG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGGCAGGCAGGCAGGAATaGTCTCATGCCCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKAGRQE*SHAQGQ
Trigger: CTGCCCTTGGGCATGAGACAATTCCTGCCTGCCTGC...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTACATCAGCCATGCTCTaGCAGCCATGTAGAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCTSAML*QPCRGA
Trigger: AGCTCCTCTACATGGCTGCAAGAGCATGGCTGATGT...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTCCTGGTGCTGTCACTaGTACCCACTCTCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCSWCCH*YPLSCF
Trigger: GAAACAGGAGAGTGGGTACAAGTGACAGCACCAGGA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp GCACAATCCCATCGGGGACTTTGGCACCCTGCCTGCCGTCAAACTTaGAGATCATCTCACTGCTGTCCACCAGCAGTCCTGCAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: AQSHRGLWHPACRQT*RSSHCCPPAVLQSS
Trigger: ACTGGACTGCAGGACTGCTGGTGGACAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGATTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 90 bp ACACCAGGGCTGGGGCCGTGTTTCATCCACATGGTGATGGTGAACTaGTCGGTCAGGTTCTTGGGCACAATCCCATCGGGGACTTTGGCA +
Preference number: 5 (lower is better)
Translates to: TPGLGPCFIHMVMVN*SVRFLGTIPSGTLA
Trigger: TGCCAAAGTCCCCGATGGGATTGTGCCCAAGAACCTGACCGATCAGTTCACCATCACCATGTGGATGAAACACGGCCCCAGCCCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 90 bp TCGGTCAGGTTCTTGGGCACAATCCCATCGGGGACTTTGGCACCCTaGCTGCCGTCAAACTTGAAGATCATCTCACTGCTGTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: SVRFLGTIPSGTLAP*LPSNLKIISLLSTS
Trigger: GCTGGTGGACAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGATTGTGCCCAAGAACCTGACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 90 bp ATCTTGATATCAGGGAAGAGGGTCACTCCCCTGGCACTTTCAAACTaGGCAGCAGGTCTCCAGAAGTGGTCTGTGCCCCGGAGGGTGATC +
Preference number: 5 (lower is better)
Translates to: ILISGKRVTPLALSN*AAGLQKWSVPRRVI
Trigger: GATCACCCTCCGGGGCACAGACCACTTCTGGAGACCTGCTGCCCAGTTTGAAAGTGCCAGGGGAGTGACCCTCTTCCCTGATATCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp TCACTGGACTTTGGAGGATACTTTGAGGCGCCGCACACCCGCCGTTaGGAACTGCCTGGAGTTGATGTAGGAGACTTTCTGGAGAGCACG +
Preference number: 5 (lower is better)
Translates to: SLDFGGYFEAPHTRR*ELPGVDVGDFLEST
Trigger: CGTGCTCTCCAGAAAGTCTCCTACATCAACTCCAGGCAGTTCCCAACGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAGTCCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCCCACTCCAGCTGGGCTaGCCTGGCTCCATTCTGCCC +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSPLQLG*PGSILP
Trigger: GGGCAGAATGGAGCCAGGCAAGCCCAGCTGGAGTGG...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp GACCTCCAAGTTGAACTCATTGCTAGTGTAGCGCCCATTGAGTTCTaGGCACTTAATCCGGAAACGCCGGGCCTCAAGGGAAGCCGGACG +
Preference number: 5 (lower is better)
Translates to: DLQVELIASVAPIEF*ALNPETPGLKGSRT
Trigger: CGTCCGGCTTCCCTTGAGGCCCGGCGTTTCCGGATTAAGTGCTCAGAACTCAATGGGCGCTACACTAGCAATGAGTTCAACTTGGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTCAGTGTTCCTGATGTaGCCATTTCTGTCGATGGCA +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCSVFLM*PFLSMA
Trigger: TGCCATCGACAGAAATGGCAACATCAGGAACACTGA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGAGCGCCGACTGTGAGTaGCATGGCTATGTGAGATGG +
Preference number: 5 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKSADCE*HGYVRW
Trigger: CCATCTCACATAGCCATGCAACTCACAGTCGGCGCT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCCAAGCACTCCTGCCTaGGGTCCAAGTCCCCTCCGA +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGPSTPA*GPSPLR
Trigger: TCGGAGGGGACTTGGACCCAAGGCAGGAGTGCTTGG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAACTCAGGAGGGCTCCCTaGCATCAGTCTGGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKLRRAP*HQSGLC
Trigger: GCACAAGCCAGACTGATGCAAGGGAGCCCTCCTGAG...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCGTGCATCACAAATGTaGTCCTCTGTTCACTGCACT +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCRASQM*SSVHCT
Trigger: AGTGCAGTGAACAGAGGACAACATTTGTGATGCACG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 90 bp AGGTGTCGTTGGTGGAGCTCACTGTGGTTGAGCTCCAAGCACTCCTaGCTTGGGTCCAAGTCCCCTCCGATCACCAAAATGTCACAGAAA +
Preference number: 5 (lower is better)
Translates to: RCRWWSSLWLSSKHS*LGSKSPPITKMSQK
Trigger: TTTCTGTGACATTTTGGTGATCGGAGGGGACTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGTCCTGGCCATGGATCTaGAACGCACAGATTTCCCCT +
Preference number: 5 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKSWPWI*NAQISP
Trigger: AGGGGAAATCTGTGCGTTCAAGATCCATGGCCAGGA...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCAGTCAATGGGGCTCTaGGCACGGAGCCGGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQQSMGL*ARSRPS
Trigger: AGAGGGCCGGCTCCGTGCCAAGAGCCCCATTGACTG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATGGAGCTCACTGTGGTaGAGCTCCAAGCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKWSSLW*SSKHSC
Trigger: GCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGGAAACAGCTCTGATTaGTTGTCACCACTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCGNSSD*LSPLFL
Trigger: GAGAAACAGTGGTGACAACAAATCAGAGCTGTTTCC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCAGGCAGGAAACTCGCTaGAACCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSRQETR*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGCGAGTTTCCTGCCT...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAGGTGTATGGTACGGGTaGCCAAACTTTGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREGVWYG*PNFGLG
Trigger: CCCAAGGCCAAAGTTTGGCAACCCGTACCATACACC...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp GGCAGGAGATCACCTTCTGGCTTTCCATTTTGCCAGGGCGGATGGTaGGACTGGCCAGGCTTCCATGAAAGAACTGAGCAAACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: GRRSPSGFPFCQGGW*DWPGFHERTEQTVV
Trigger: AACCACAGTTTGCTCAGTTCTTTCATGGAAGCCTGGCCAGTCTCACCATCCGCCCTGGCAAAATGGAAAGCCAGAAGGTGATCTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 90 bp CATAGTGATGCCGGTTCATTTCGGTTTTGTCTGAGTTGCAGAGGATaGTTTCCTTCTCGGCTCTCACACCAGGGCTGGGGCCGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: HSDAGSFRFCLSCRG*FPSRLSHQGWGRVS
Trigger: TGAAACACGGCCCCAGCCCTGGTGTGAGAGCCGAGAAGGAAACCATCCTCTGCAACTCAGACAAAACCGAAATGAACCGGCATCACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGATCTCATACTGGTGTaGTTTGTCATAGCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCDLILV*FVIAQL
Trigger: AAGCTGAGCTATGACAAACAACACCAGTATGAGATC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTCCCAGAACCTTTACATaGGTTACAAAATCATGCCTG +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCPRTFT*VTKSCL
Trigger: CAGGCATGATTTTGTAACCAATGTAAAGGTTCTGGG...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAATATGGACCACGGCCTaGTGTGACTTTTTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREIWTTA*CDFFQA
Trigger: AGCCTGGAAAAAGTCACACAAGGCCGTGGTCCATAT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTCTTGCCAGCCAGGCTaGCAAACTGGCTTCACATCC +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSSCQPG*QTGFTS
Trigger: GGATGTGAAGCCAGTTTGCAAGCCTGGCTGGCAAGA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAGGGTAGCTGCATGGTaGCAGCAGGTGCCCAGACAG +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQRVAAW*QQVPRQ
Trigger: CTGTCTGGGCACCTGCTGCAACCATGCAGCTACCCT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGACTTTCATTGTAGACTaGGTGGAGCTCGTGCGTTTC +
Preference number: 5 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKTFIVD*VELVRF
Trigger: GAAACGCACGAGCTCCACCAAGTCTACAATGAAAGT...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTTATGAAGTGTTCTTTTaGCTGCCACAATTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCYEVFF*LPQFWE
Trigger: CTCCCAAAATTGTGGCAGCAAAAAGAACACTTCATA...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCATTGCTCATTTCTTTaGCCTGCAGCTGGACAATGG +
Preference number: 5 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKHCSFL*PAAGQW
Trigger: CCATTGTCCAGCTGCAGGCAAAAGAAATGAGCAATG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCTTCAGCTCTGATGTaGGGCCTCAGGAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFSSALM*GLRRAP
Trigger: GGGAGCCCTCCTGAGGCCCAACATCAGAGCTGAAGA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTACCTCCTCATCCCTTaGCCTGCCTTCTCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSYLLIP*PAFSAE
Trigger: CTCTGCAGAGAAGGCAGGCAAAGGGATGAGGAGGTA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp CGATGGCCTGGAGGACCATCACATAGGCATCTACCTCAGGGATACTaGTGCATACGTCTTCCCCAAAGCACTGGACTTTGGAGGATACTT +
Preference number: 5 (lower is better)
Translates to: RWPGGPSHRHLPQGY*CIRLPQSTGLWRIL
Trigger: AAGTATCCTCCAAAGTCCAGTGCTTTGGGGAAGACGTATGCATCAGTATCCCTGAGGTAGATGCCTATGTGATGGTCCTCCAGGCCATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 90 bp AATGCTGTCATAGATCTTGCCCTCCGTCACAACAGCCTTGTAGGCTaGCTCTTTGAAGGTGGGAGCAAACTCGTTGACATCCTTCACCTG +
Preference number: 5 (lower is better)
Translates to: NAVIDLALRHNSLVG*LFEGGSKLVDILHL
Trigger: CAGGTGAAGGATGTCAACGAGTTTGCTCCCACCTTCAAAGAGCCAGCCTACAAGGCTGTTGTGACGGAGGGCAAGATCTATGACAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 90 bp TCCTTGCCAACAAGCGCCGACTGTGAGTTGCATGGCTATGTGAGATaGATGAATGGGCCAGTCGTTGGTCACCAGGTATGGTTCATATGT +
Preference number: 5 (lower is better)
Translates to: SLPTSADCELHGYVR*MNGPVVGHQVWFIC
Trigger: ACATATGAACCATACCTGGTGACCAACGACTGGCCCATTCATCCATCTCACATAGCCATGCAACTCACAGTCGGCGCTTGTTGGCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTCTGGCTTTCCATTTaGCCAGGGCGGATGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGFWLSI*PGRMVR
Trigger: TCTCACCATCCGCCCTGGCAAAATGGAAAGCCAGAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTTGTTGTGTTGTCCTGGGGCAGTGCCTGTGTGGAATGCCTCCTGGGCCCTGTGTCTTGTCTATACTTTaGAATGACTCTGAACAAGAC +
Preference number: 5 (lower is better)
Translates to: PCCVVLGQCLCGMPPGPCVLSIL*NDSEQD
Trigger: GTCTTGTTCAGAGTCATTCAAAAGTATAGACAAGAC...ACAGGGCCCAGGAGGCATTCCACACAGGCACTGCCCCAGGACAACACAACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTTCCTCCCTTCCCCTGTaGCTGGCACAGGGCCTGACC +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICSSLPL*LAQGLT
Trigger: GGTCAGGCCCTGTGCCAGCAACAGGGGAAGGGAGGA...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGATCTACCCCTGCTCCTaGCTTAGGGGCTCCATTTAC +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGIYPCS*LRGSIY
Trigger: GTAAATGGAGCCCCTAAGCAAGGAGCAGGGGTAGAT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCCCTCTCCTGATGTCTaGTTGAGCACCACAGCCTCA +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFPSPDV*LSTTAS
Trigger: TGAGGCTGTGGTGCTCAACAAGACATCAGGAGAGGG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGTTCAACCACCCTCCTaGTATGAAGCAACCTGGAGT +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSVQPPS*YEATWS
Trigger: ACTCCAGGTTGCTTCATACAAGGAGGGTGGTTGAAC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGGGATCAGACCCTGCTaGTGGCCAAGGACCTATTCT +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFGIRPC*WPRTYS
Trigger: AGAATAGGTCCTTGGCCACAAGCAGGGTCTGATCCC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGCCTGCCAGAGTACATaGCAGAAGGCTTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFACQST*QKALGI
Trigger: GATCCCCAAAGCCTTCTGCAATGTACTCTGGCAGGC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTTCCATCTCAGATTCCTaGGCAGCCTCAGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFSISDS*AASVSW
Trigger: CCAGGAGACTGAGGCTGCCAAGGAATCTGAGATGGA...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAATGGCACTTTTTCCTGTaGTTCAGTTTGGAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKWHFFL*FSLEAK
Trigger: CTTTGCCTCCAAACTGAACAACAGGAAAAAGTGCCA...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGCCATCTCAAAACCCCTaGTATGAGGAGACTGTACCT +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGPSQNP*YEETVP
Trigger: AGGTACAGTCTCCTCATACAAGGGGTTTTGAGATGG...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GAAGTCCTCACTGATGGCCATGCTGGGCTTCTTGGAACTTCCCCATGGATGAAAGATTTGACTGCCTCTTaGGTCACATGGCCAGATTTA +
Preference number: 5 (lower is better)
Translates to: EVLTDGHAGLLGTSPWMKDLTAS*VTWPDL
Trigger: TAAATCTGGCCATGTGACCAAAGAGGCAGTCAAATC...TTTCATCCATGGGGAAGTTCCAAGAAGCCCAGCATGGCCATCAGTGAGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CCTCCCTGGGTGGAGGTCAGACTAGAGGACATTGGCAGTAGTCCCCTTCTTAAGCAAACAGCTCTGACTTaGGAAGCAATTGATTTGACT +
Preference number: 5 (lower is better)
Translates to: PPWVEVRLEDIGSSPLLKQTALT*EAIDLT
Trigger: AGTCAAATCAATTGCTTCCAAAGTCAGAGCTGTTTG...CTTAAGAAGGGGACTACTGCCAATGTCCTCTAGTCTGACCTCCACCCAGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp GAGGAAGGGAGGCTGCACAATCAGATGATTGACATGCTCCTTATCTaGGACTTGGTCTTCATGAAGGATGCTGACCTCCAAGTTGAACTC +
Preference number: 5 (lower is better)
Translates to: EEGRLHNQMIDMLLI*DLVFMKDADLQVEL
Trigger: GAGTTCAACTTGGAGGTCAGCATCCTTCATGAAGACCAAGTCTCAGATAAGGAGCATGTCAATCATCTGATTGTGCAGCCTCCCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTCCTCTTGGTCCAGTCTaGCCAGCCAGGCTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICPLGPV*PARLAN
Trigger: GTTTGCAAGCCTGGCTGGCAAGACTGGACCAAGAGG...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGGTGACTTCTCCTCCTaGCCAACAAGCGCCGACTGT +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICGDFSS*PTSADC
Trigger: ACAGTCGGCGCTTGTTGGCAAGGAGGAGAAGTCACC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGATAGAAAAGGGCTATTaGGTTGGGAGAATTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGIEKGY*VGRIPR
Trigger: CCTGGGAATTCTCCCAACCAAATAGCCCTTTTCTAT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGAATCTGGTTGTCCACTaGGCAAGACAAGCAATGAAC +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGNLVVH*ARQAMN
Trigger: GTTCATTGCTTGTCTTGCCAAGTGGACAACCAGATT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCGAAGGCAGAATCTGGTaGTCCACTTGGCAAGACAAG +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFEGRIW*STWQDK
Trigger: CTTGTCTTGCCAAGTGGACAACCAGATTCTGCCTTC...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GCAAGACAAGCAATGAACTGGGCTGTGGCCAAACCAGTCAGCAGTTCCTCCTGGCTGATGATGTTGCTATaGATTCAAACAGTCACAAGT +
Preference number: 5 (lower is better)
Translates to: ARQAMNWAVAKPVSSSSWLMMLL*IQTVTS
Trigger: ACTTGTGACTGTTTGAATCAATAGCAACATCATCAG...CCAGGAGGAACTGCTGACTGGTTTGGCCACAGCCCAGTTCATTGCTTGTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGGCCATTCAGGAGGACTCTGAAAAGACTGCTGAGGCTGTGAGCAGGAGAGAAATAGAGCCAAGAAGATaGCTAATTTCGAAGTGTGCT +
Preference number: 5 (lower is better)
Translates to: WAIQEDSEKTAEAVSRREIEPRR*LISKCA
Trigger: AGCACACTTCGAAATTAGCAATCTTCTTGGCTCTAT...TTCTCTCCTGCTCACAGCCTCAGCAGTCTTTTCAGAGTCCTCCTGAATGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCTTGTGCCAAGGGCTTTaGCTTGTCAGCCTCAATAAA +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSLCQGL*LVSLNK
Trigger: TTTATTGAGGCTGACAAGCAAAAGCCCTTGGCACAA...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTTGCATCAGTCTGGCTaGTGCCTTTTGAGACTTGGC +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLHQSG*CLLRLG
Trigger: GCCAAGTCTCAAAAGGCACAAGCCAGACTGATGCAA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTATCTGGGGGAGGGGGTaGTTCCTGGTGCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICIWGRG*FLVLSL
Trigger: AAGTGACAGCACCAGGAACAACCCCCTCCCCCAGAT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 90 bp AAGAACACAGATCCTTTGAGGCATCCTCAGAGGAATAGCAGAAGTTaGGGACAGCTGACGAAAGGCAACTCCTGTTTTGTGAGGGAACAT +
Preference number: 5 (lower is better)
Translates to: KNTDPLRHPQRNSRS*GQLTKGNSCFVREH
Trigger: ATGTTCCCTCACAAAACAGGAGTTGCCTTTCGTCAGCTGTCCTCAACTTCTGCTATTCCTCTGAGGATGCCTCAAAGGATCTGTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGGTGGGAGCAAACTCGTaGACATCCTTCACCTGTATA +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQVGANS*TSFTCI
Trigger: TATACAGGTGAAGGATGTCAACGAGTTTGCTCCCAC...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGCGGTTCATTTCGGTTTaGTCTGAGTTGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQRFISV*SELQRM
Trigger: CATCCTCTGCAACTCAGACAAAACCGAAATGAACCG...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGGGTATGGTTCATATGTaGCTCCATCCATGTATAAGG +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGGMVHM*LHPCIR
Trigger: CCTTATACATGGATGGAGCAACATATGAACCATACC...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCAATTCTCTTCACAGGTaGTGCATGTTAGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSNSLHR*CMLGWR
Trigger: TCTCCATCCTAACATGCACAACCTGTGAAGAGAATT...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGTTTGGGAGAATTCAGTaGCTCCTAAATGCCCAACTA +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGFGRIQ*LLNAQL
Trigger: TAGTTGGGCATTTAGGAGCAACTGAATTCTCCCAAA...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTCATTCAGTAGGTCTGGGGATTTTACAAAGGACCTaGACTCACAAACCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SLNHRLPASRASHSVGLGILQRT*THKPRR
Trigger: CCTTCTCGGTTTGTGAGTCAAGGTCCTTTGTAAAAT...CCCCAGACCTACTGAATGAGAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGCCGGGGGCTTCGGTTTaGGCGAAGGTGCTCACAATC +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELPGASV*AKVLTI
Trigger: GATTGTGAGCACCTTCGCCAAAACCGAAGCCCCCGG...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTCTAAGACTTCTGATTaGGGGTCTGTGGTTTTCACG +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQSKTSD*GSVVFT
Trigger: CGTGAAAACCACAGACCCCAAATCAGAAGTCTTAGA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGTTCTTCTGTCTCTTTTaGTCTCCCTGGGATGGAATG +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQFFCLF*SPWDGM
Trigger: CATTCCATCCCAGGGAGACAAAAAGAGACAGAAGAA...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGGTACTCAATCCTCTaGGTCCAGTCTTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLWYSIL*VQSCQP
Trigger: TGGCTGGCAAGACTGGACCAAGAGGATTGAGTACCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGCCAAAGCACTGGACTTaGGAGGATACTTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLPKHWT*EDTLRR
Trigger: GCGCCTCAAAGTATCCTCCAAAGTCCAGTGCTTTGG...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTAACAGCTCTGATTTGTaGTCACCACTGTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFNSSDL*SPLFLC
Trigger: GCAGAGAAACAGTGGTGACAACAAATCAGAGCTGTT...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TGGATGAGCCTTTATATTAACATCCATGACCCACAGGCACAAGCAAGGCCCTCCGGAATATCTGTCAGTTaGTCAGTTCAGCAAATAACA +
Preference number: 5 (lower is better)
Translates to: WMSLYINIHDPQAQARPSGISVS*SVQQIT
Trigger: TGTTATTTGCTGAACTGACAAACTGACAGATATTCC...GGAGGGCCTTGCTTGTGCCTGTGGGTCATGGATGTTAATATAAAGGCTCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCCAAGCAATTCAGTGTTaGAATTGTGATGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFQAIQC*NCDAAC
Trigger: GCATGCAGCATCACAATTCAAACACTGAATTGCTTG...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTTGGAAGCAATTGATTaGACTGCCTCTTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFLEAID*TASLVT
Trigger: TGTGACCAAAGAGGCAGTCAAATCAATTGCTTCCAA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGTCTCGATCCATGGCTaGTGCTTATTGACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICVSIHG*CLLTLA
Trigger: GGCTAAAGTCAATAAGCACAAGCCATGGATCGAGAC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTCTCCTGATGTCTTGTaGAGCACCACAGCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLSPDVL*STTASK
Trigger: CTTTGAGGCTGTGGTGCTCAACAAGACATCAGGAGA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTGCCTGCCGTCAAACTaGAAGATCATCTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLCLPSN*KIISLL
Trigger: CAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTAAGGTGCTCACAATCTaGATATCAGGGAAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICKVLTI*ISGKRV
Trigger: GACCCTCTTCCCTGATATCAAGATTGTGAGCACCTT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGCCAAGGGCTTTTGCTaGTCAGCCTCAATAAATGTC +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICAKGFC*SASINV
Trigger: GACATTTATTGAGGCTGACAAGCAAAAGCCCTTGGC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CACTTTTGCCACCAAGGGTGGATGAGCCTTTATATTAACATCCATGACCCACAGAATTCAATTCAACATTaGTGGCACACATGTCATGGG +
Preference number: 5 (lower is better)
Translates to: HFCHQGWMSLYINIHDPQNSIQH*WHTCHG
Trigger: CCCATGACATGTGTGCCACAAATGTTGAATTGAATT...CTGTGGGTCATGGATGTTAATATAAAGGCTCATCCACCCTTGGTGGCAAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGATACAGAGCAATGCTTaGGCATCTGGGGGAGGGGGT +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELIQSNA*ASGGGG
Trigger: ACCCCCTCCCCCAGATGCCAAAGCATTGCTCTGTAT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp TTAGTGTGTGTCAGAAAGCTCATTAAATCACAGACTGCCTGCCTCCAGAGCTTCTGTGGCTCATTCAATTaGGGGTATACTCATACTACT +
Preference number: 5 (lower is better)
Translates to: LVCVRKLIKSQTACLQSFCGSFN*GYTHTT
Trigger: AGTAGTATGAGTATACCCCAAATTGAATGAGCCACA...GAAGCTCTGGAGGCAGGCAGTCTGTGATTTAATGAGCTTTCTGACACACACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CTGACAAAGTACCAGCAAGTTCCTTTCAAAGGTCTGTGGACCTTCACAGAGTTTGCTAACACGTTTCTGTaGTCTGTGATTAATACACAC +
Preference number: 5 (lower is better)
Translates to: LTKYQQVPFKGLWTFTEFANTFL*SVINTH
Trigger: GTGTGTATTAATCACAGACAACAGAAACGTGTTAGC...AAACTCTGTGAAGGTCCACAGACCTTTGAAAGGAACTTGCTGGTACTTTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGTTTGCTGCCACAATTTaGGGAGAATTCAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLFAATI*GEFSCS
Trigger: GGAGCAACTGAATTCTCCCAAAATTGTGGCAGCAAA...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTGTTGAATCCATGGATTaGGAAACCTCAGATATGGAG +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICVESMD*ETSDME
Trigger: CTCCATATCTGAGGTTTCCAAATCCATGGATTCAAC...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGAATTTCGAAGTGTGCTaGGTCGGGCTTTCTACTGAT +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLNFEVC*VGLSTD
Trigger: ATCAGTAGAAAGCCCGACCAAGCACACTTCGAAATT...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp GTCCCTTCACTGAGGTCAAGTGATCTCTGGGATTCAATTCAATTCAACATTTGTACTCTCCTTTTCCAGTaGGCACTAAAGGGAAAACTA +
Preference number: 5 (lower is better)
Translates to: VPSLRSSDLWDSIQFNICTLLFQ*ALKGKL
Trigger: TAGTTTTCCCTTTAGTGCCAACTGGAAAAGGAGAGT...ACAAATGTTGAATTGAATTGAATCCCAGAGATCACTTGACCTCAGTGAAGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTATAATCTCATTACCTaGGAGGCCAAGGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELYNLIT*EAKVGR
Trigger: TCTGCCCACCTTGGCCTCCAAGGTAATGAGATTATA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGATATTCAGGGAAATATaGCCTACTTCCCTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELIFREI*PTSLES
Trigger: GCTCTCCAGGGAAGTAGGCAATATTTCCCTGAATAT...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp CAATTAAGAGCTGATCACCTTCAAACAGCTCTGACTTTGGAAGCAATTGATTTGGAATTGAACTTCATGTaGATGAATCTGCTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: QLRADHLQTALTLEAIDLELNFM*MNLLCS
Trigger: ACTGCAGAGCAGATTCATCAACATGAAGTTCAATTC...CAAATCAATTGCTTCCAAAGTCAGAGCTGTTTGAAGGTGATCAGCTCTTAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGTGTGAGTGTTCTATATaGGCCAGGATGGATGCACTT +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELCECSI*ARMDAL
Trigger: AAGTGCATCCATCCTGGCCAATATAGAACACTCACA...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGCCAAGGACCTATTCTaGGTTTGGGACTTTTCTTAT +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELAKDLF*VWDFSY
Trigger: ATAAGAAAAGTCCCAAACCAAGAATAGGTCCTTGGC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS-3UTR CAA 90 bp AAACATTCATTTGTTGTACGTATTGTCTGTTTTCATGCTACAATAGGAGAGCTGGATATGTATATGGCTTaGGGGTATGTGTATATGTAC +
Preference number: 5 (lower is better)
Translates to: KHSFVVRIVCFHATIGELDMYMA*GYVYMY
Trigger: GTACATATACACATACCCCAAAGCCATATACATATC...CAGCTCTCCTATTGTAGCATGAAAACAGACAATACGTACAACAAATGAATGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 72 bp TGCCGCACCGTGGGCCGCCTCGCCGTGCCCGATGGGTaGGCTTCTAGCGCTGCCGCCGCGGCGCTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: CRTVGRLAVPDG*ASSAAAAALGL
Trigger: GAGGCCGAGCGCCGCGGCGGCAGCGCTAGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 72 bp CTCCCGGTGCCTGCCGCACCGTGGGCCGCCTCGCCGTaGCCGATGGGTGCGCTTCTAGCGCTGCCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: LPVPAAPWAASP*PMGALLALPPR
Trigger: CCGCGGCGGCAGCGCTAGAAGCGCACCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 72 bp GCCTACTGTCCGCGCCGGCTCTCGCCTCCCGGTGCCTaGCGCACCGTGGGCCGCCTCGCCGTGCCCGATGGG +
Preference number: 6 (lower is better)
Translates to: AYCPRRLSPPGA*RTVGRLAVPDG
Trigger: CCCATCGGGCACGGCGAGGCGGCCCACGGTGCGGCAGGCACCGGGAGGCGAGAGCCGGCGCGGACAGTAGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 72 bp AAGACACGGCTCCATCGCACGTCTCCAGGTGGATGCTaGGGAACAGGGGCATGCTCCCGGAGCCAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: KTRLHRTSPGGC*GTGACSRSQAG
Trigger: ACCAGCCTGGCTCCGGGAGCATGCCCCTGTTCCCCAGCATCCACCTGGAGACGTGCGATGGAGCCGTGTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 72 bp CAGCAGGTCTCCAGAAGTGGTCTGTGCCCCGGAGGGTaGTCCGGGGCTCGATGGCCTGGAGGACCATCACAT +
Preference number: 6 (lower is better)
Translates to: QQVSRSGLCPGG*SGARWPGGPSH
Trigger: ATGTGATGGTCCTCCAGGCCATCGAGCCCCGGATCACCCTCCGGGGCACAGACCACTTCTGGAGACCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 72 bp GACCAGCGTCCACTCACTGGACTTTGGAGGATACTTTaGGGCGCCGCACACCCGCCGTTGGGAACTGCCTGG +
Preference number: 6 (lower is better)
Translates to: DQRPLTGLWRIL*GAAHPPLGTAW
Trigger: CCAGGCAGTTCCCAACGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAGTCCAGTGAGTGGACGCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS GCA 72 bp GGAAACGCCGGGCCTCAAGGGAAGCCGGACGCCAGTTaGGGTAGCGGATGTGATGTAGCACCTGCTCATAGC +
Preference number: 6 (lower is better)
Translates to: GNAGPQGKPDAS*GSGCDVAPAHS
Trigger: GCTATGAGCAGGTGCTACATCACATCCGCTACCGCAACTGGCGTCCGGCTTCCCTTGAGGCCCGGCGTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 72 bp TTCCCAAGGGACCTCAGTTGGGACCTTCCCAACTGCTaGCTCAGTTGGCCCCAGGCTGACCAGCGTCCACTC +
Preference number: 6 (lower is better)
Translates to: FPRDLSWDLPNC*LSWPQADQRPL
Trigger: GAGTGGACGCTGGTCAGCCTGGGGCCAACTGAGGCAGCAGTTGGGAAGGTCCCAACTGAGGTCCCTTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS TCA 72 bp CGTCTTCCCCAAAGCACTGGACTTTGGAGGATACTTTaGGGCGCCGCACACCCGCCGTTGGGAACTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RLPQSTGLWRIL*GAAHPPLGTAW
Trigger: CCAGGCAGTTCCCAACGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAGTCCAGTGCTTTGGGGAAGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 72 bp TTCCAGTGGAACTCCGCGGGGCGAAAGGTGTCAGCCTaGTCGAAGTCCTTCCGCAAGAGAAAGACGAGGCGG +
Preference number: 6 (lower is better)
Translates to: FQWNSAGRKVSA*SKSFRKRKTRR
Trigger: CCGCCTCGTCTTTCTCTTGCGGAAGGACTTCGACCAGGCTGACACCTTTCGCCCCGCGGAGTTCCACTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 72 bp TCAGGGAAGAGGGTCACTCCCCTGGCACTTTCAAACTaGGCAGCAGGTCTCCAGAAGTGGTCTGTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: SGKRVTPLALSN*AAGLQKWSVPR
Trigger: CCGGGGCACAGACCACTTCTGGAGACCTGCTGCCCAGTTTGAAAGTGCCAGGGGAGTGACCCTCTTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 72 bp TGGCATCCAGGTGTCGTTGGTGGAGCTCACTGTGGTTaGGCTCCAAGCACTCCTGCCTTGGGTCCAAGTCCC +
Preference number: 6 (lower is better)
Translates to: WHPGVVGGAHCG*APSTPALGPSP
Trigger: GGGACTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 72 bp CAGTCCTGCAGTCCAGTTGGTGGCAGCGCTAGGGGATaGCAAGAGGTCAATGATGCCAGAGGAGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: QSCSPVGGSARG*QEVNDARGGST
Trigger: TGTGGAGCCTCCTCTGGCATCATTGACCTCTTGCCATCCCCTAGCGCTGCCACCAACTGGACTGCAGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 72 bp CAGTCCATCTCAGATTCCTTGGCAGCCTCAGTCTCCTaGATGAAGTGCTGGTGGGCGATCCGGACCCGGTAC +
Preference number: 6 (lower is better)
Translates to: QSISDSLAASVS*MKCWWAIRTRY
Trigger: GTACCGGGTCCGGATCGCCCACCAGCACTTCATCCAGGAGACTGAGGCTGCCAAGGAATCTGAGATGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CAA 72 bp GCCTGCAGGCAGGAGATCACCTTCTGGCTTTCCATTTaGCCAGGGCGGATGGTGAGACTGGCCAGGCTTCCA +
Preference number: 6 (lower is better)
Translates to: ACRQEITFWLSI*PGRMVRLARLP
Trigger: TGGAAGCCTGGCCAGTCTCACCATCCGCCCTGGCAAAATGGAAAGCCAGAAGGTGATCTCCTGCCTGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp ACGTCTTCCCCAAAGCACTGGACTTTGGAGGATACTTaGAGGCGCCGCACACCCGCCGTTGGGAACTGCCTG +
Preference number: 6 (lower is better)
Translates to: TSSPKHWTLEDT*RRRTPAVGNCL
Trigger: CAGGCAGTTCCCAACGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAAGTCCAGTGCTTTGGGGAAGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CAA 72 bp GTGGCATCCAGGTGTCGTTGGTGGAGCTCACTGTGGTaGAGCTCCAAGCACTCCTGCCTTGGGTCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: VASRCRWWSSLW*SSKHSCLGSKS
Trigger: GGACTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CAA 90 bp GGCACAATCCCATCGGGGACTTTGGCACCCTGCCTGCCGTCAAACTaGAAGATCATCTCACTGCTGTCCACCAGCAGTCCTGCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: GTIPSGTLAPCLPSN*KIISLLSTSSPAVQ
Trigger: CTGGACTGCAGGACTGCTGGTGGACAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGATTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 72 bp CCTTCCTTGCAGGCCTGCAGGCAGGAGATCACCTTCTaGCTTTCCATTTTGCCAGGGCGGATGGTGAGACTG +
Preference number: 6 (lower is better)
Translates to: PSLQACRQEITF*LSILPGRMVRL
Trigger: CAGTCTCACCATCCGCCCTGGCAAAATGGAAAGCCAGAAGGTGATCTCCTGCCTGCAGGCCTGCAAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp ATCTCACTGCTGTCCACCAGCAGTCCTGCAGTCCAGTaGGTGGCAGCGCTAGGGGATGGCAAGAGGTCAATG +
Preference number: 6 (lower is better)
Translates to: ISLLSTSSPAVQ*VAALGDGKRSM
Trigger: CATTGACCTCTTGCCATCCCCTAGCGCTGCCACCAACTGGACTGCAGGACTGCTGGTGGACAGCAGTGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 90 bp GTAGAATTAGTGGCATCCAGGTGTCGTTGGTGGAGCTCACTGTGGTaGAGCTCCAAGCACTCCTGCCTTGGGTCCAAGTCCCCTCCGATC +
Preference number: 6 (lower is better)
Translates to: VELVASRCRWWSSLW*SSKHSCLGSKSPPI
Trigger: GATCGGAGGGGACTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCACTAATTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 72 bp CATCGGGGACTTTGGCACCCTGCCTGCCGTCAAACTTaGAGATCATCTCACTGCTGTCCACCAGCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: HRGLWHPACRQT*RSSHCCPPAVL
Trigger: CAGGACTGCTGGTGGACAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 72 bp GGGAGCAGTCCTCGTCAATGGCCTCCACCTGCAGAATaGTGTCATAGATCTTGCCCTCCGTCACAACAGCCT +
Preference number: 6 (lower is better)
Translates to: GSSPRQWPPPAE*CHRSCPPSQQP
Trigger: AGGCTGTTGTGACGGAGGGCAAGATCTATGACAGCATTCTGCAGGTGGAGGCCATTGACGAGGACTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 72 bp CTTGAAGATCATCTCACTGCTGTCCACCAGCAGTCCTaGAGTCCAGTTGGTGGCAGCGCTAGGGGATGGCAA +
Preference number: 6 (lower is better)
Translates to: LEDHLTAVHQQS*SPVGGSARGWQ
Trigger: TTGCCATCCCCTAGCGCTGCCACCAACTGGACTGCAGGACTGCTGGTGGACAGCAGTGAGATGATCTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 72 bp TGGTGGAGCTCACTGTGGTTGAGCTCCAAGCACTCCTaGCTTGGGTCCAAGTCCCCTCCGATCACCAAAATG +
Preference number: 6 (lower is better)
Translates to: WWSSLWLSSKHS*LGSKSPPITKM
Trigger: CATTTTGGTGATCGGAGGGGACTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 72 bp GCGGCTCATGGAGCCCACACCGTAGATGGAGTAGCCTaGAGTAGAATTAGTGGCATCCAGGTGTCGTTGGTG +
Preference number: 6 (lower is better)
Translates to: AAHGAHTVDGVA*SRISGIQVSLV
Trigger: CACCAACGACACCTGGATGCCACTAATTCTACTGCAGGCTACTCCATCTACGGTGTGGGCTCCATGAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 72 bp TTAGTGGCATCCAGGTGTCGTTGGTGGAGCTCACTGTaGTTGAGCTCCAAGCACTCCTGCCTTGGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: LVASRCRWWSSL*LSSKHSCLGSK
Trigger: CTTGGACCCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCACTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 72 bp CCTCCTCCTCCTCTTCGCTGTCGTCAGAGCCACTGCTaGAGCTCATTTCTTCCTCGGCTTCTTCCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PPPPLRCRQSHC*SSFLPRLLPPL
Trigger: AAGAGGAGGAAGAAGCCGAGGAAGAAATGAGCTCCAGCAGTGGCTCTGACGACAGCGAAGAGGAGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CAA 72 bp GTGTACTCCTTCTGCAACTCACAGTCAATGGGGCTCTaGGCACGGAGCCGGCCCTCTCCTGATGTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: VYSFCNSQSMGL*ARSRPSPDVLL
Trigger: CAACAAGACATCAGGAGAGGGCCGGCTCCGTGCCAAGAGCCCCATTGACTGTGAGTTGCAGAAGGAGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp CCATCGGGGACTTTGGCACCCTGCCTGCCGTCAAACTaGAAGATCATCTCACTGCTGTCCACCAGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: PSGTLAPCLPSN*KIISLLSTSSP
Trigger: AGGACTGCTGGTGGACAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 90 bp TTGAAGATCATCTCACTGCTGTCCACCAGCAGTCCTGCAGTCCAGTaGGTGGCAGCGCTAGGGGATGGCAAGAGGTCAATGATGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LKIISLLSTSSPAVQ*VAALGDGKRSMMPE
Trigger: CTCTGGCATCATTGACCTCTTGCCATCCCCTAGCGCTGCCACCAACTGGACTGCAGGACTGCTGGTGGACAGCAGTGAGATGATCTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 72 bp ACTGAACTGTGCTGGATGCTACTCCGGGACTCAGGATaGTGGACAGACTGGAGGAAGGGAGGCTGCACAATC +
Preference number: 6 (lower is better)
Translates to: TELCWMLLRDSG*WTDWRKGGCTI
Trigger: GATTGTGCAGCCTCCCTTCCTCCAGTCTGTCCATCATCCTGAGTCCCGGAGTAGCATCCAGCACAGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 72 bp ACTCAATCCTCTTGGTCCAGTCTTGCCAGCCAGGCTTaGAAACTGGCTTCACATCCACCTGCACCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: TQSSWSSLASQA*KLASHPPAPGC
Trigger: ACACCCTGGTGCAGGTGGATGTGAAGCCAGTTTGCAAGCCTGGCTGGCAAGACTGGACCAAGAGGATTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS GCA 72 bp CTGTGGCAATGCTTGGGACCACTGAACTGTGCTGGATaGTACTCCGGGACTCAGGATGATGGACAGACTGGA +
Preference number: 6 (lower is better)
Translates to: LWQCLGPLNCAG*YSGTQDDGQTG
Trigger: TCCAGTCTGTCCATCATCCTGAGTCCCGGAGTAGCATCCAGCACAGTTCAGTGGTCCCAAGCATTGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 72 bp TTTGGAGGATACTTTGAGGCGCCGCACACCCGCCGTTaGGAACTGCCTGGAGTTGATGTAGGAGACTTTCTG +
Preference number: 6 (lower is better)
Translates to: FGGYFEAPHTRR*ELPGVDVGDFL
Trigger: CAGAAAGTCTCCTACATCAACTCCAGGCAGTTCCCAACGGCGGGTGTGCGGCGCCTCAAAGTATCCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 72 bp CCTGCAGTAGAATTAGTGGCATCCAGGTGTCGTTGGTaGAGCTCACTGTGGTTGAGCTCCAAGCACTCCTGC +
Preference number: 6 (lower is better)
Translates to: PAVELVASRCRW*SSLWLSSKHSC
Trigger: GCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCACTAATTCTACTGCAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CAA 72 bp TACTCAATCCTCTTGGTCCAGTCTTGCCAGCCAGGCTaGCAAACTGGCTTCACATCCACCTGCACCAGGGTG +
Preference number: 6 (lower is better)
Translates to: YSILLVQSCQPG*QTGFTSTCTRV
Trigger: CACCCTGGTGCAGGTGGATGTGAAGCCAGTTTGCAAGCCTGGCTGGCAAGACTGGACCAAGAGGATTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp TCGGTCAGGTTCTTGGGCACAATCCCATCGGGGACTTaGGCACCCTGCCTGCCGTCAAACTTGAAGATCATC +
Preference number: 6 (lower is better)
Translates to: SVRFLGTIPSGT*APCLPSNLKII
Trigger: GATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGATTGTGCCCAAGAACCTGACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 90 bp GTAGATGGAGTAGCCTGCAGTAGAATTAGTGGCATCCAGGTGTCGTaGGTGGAGCTCACTGTGGTTGAGCTCCAAGCACTCCTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: VDGVACSRISGIQVS*VELTVVELQALLPW
Trigger: CCAAGGCAGGAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCACTAATTCTACTGCAGGCTACTCCATCTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS GCA 72 bp TTCTTGGGCACAATCCCATCGGGGACTTTGGCACCCTaGCTGCCGTCAAACTTGAAGATCATCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: FLGTIPSGTLAP*LPSNLKIISLL
Trigger: CAGCAGTGAGATGATCTTCAAGTTTGACGGCAGGCAGGGTGCCAAAGTCCCCGATGGGATTGTGCCCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CCA 72 bp ACAAGCGCCGACTGTGAGTTGCATGGCTATGTGAGATaGATGAATGGGCCAGTCGTTGGTCACCAGGTATGG +
Preference number: 6 (lower is better)
Translates to: TSADCELHGYVR*MNGPVVGHQVW
Trigger: CCATACCTGGTGACCAACGACTGGCCCATTCATCCATCTCACATAGCCATGCAACTCACAGTCGGCGCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp GACTTCTCCTCCTTGCCAACAAGCGCCGACTGTGAGTaGCATGGCTATGTGAGATGGATGAATGGGCCAGTC +
Preference number: 6 (lower is better)
Translates to: DFSSLPTSADCE*HGYVRWMNGPV
Trigger: GACTGGCCCATTCATCCATCTCACATAGCCATGCAACTCACAGTCGGCGCTTGTTGGCAAGGAGGAGAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp GTAGCCTGCAGTAGAATTAGTGGCATCCAGGTGTCGTaGGTGGAGCTCACTGTGGTTGAGCTCCAAGCACTC +
Preference number: 6 (lower is better)
Translates to: VACSRISGIQVS*VELTVVELQAL
Trigger: GAGTGCTTGGAGCTCAACCACAGTGAGCTCCACCAACGACACCTGGATGCCACTAATTCTACTGCAGGCTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CAA 90 bp ATGATGAATGTGTACTCCTTCTGCAACTCACAGTCAATGGGGCTCTaGGCACGGAGCCGGCCCTCTCCTGATGTCTTGTTGAGCACCACA +
Preference number: 6 (lower is better)
Translates to: MMNVYSFCNSQSMGL*ARSRPSPDVLLSTT
Trigger: TGTGGTGCTCAACAAGACATCAGGAGAGGGCCGGCTCCGTGCCAAGAGCCCCATTGACTGTGAGTTGCAGAAGGAGTACACATTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 90 bp TGGTTTGGTGACTTCTCCTCCTTGCCAACAAGCGCCGACTGTGAGTaGCATGGCTATGTGAGATGGATGAATGGGCCAGTCGTTGGTCAC +
Preference number: 6 (lower is better)
Translates to: WFGDFSSLPTSADCE*HGYVRWMNGPVVGH
Trigger: GTGACCAACGACTGGCCCATTCATCCATCTCACATAGCCATGCAACTCACAGTCGGCGCTTGTTGGCAAGGAGGAGAAGTCACCAAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 72 bp TCACCTTCTGGCTTTCCATTTTGCCAGGGCGGATGGTaGGACTGGCCAGGCTTCCATGAAAGAACTGAGCAA +
Preference number: 6 (lower is better)
Translates to: SPSGFPFCQGGW*DWPGFHERTEQ
Trigger: TTGCTCAGTTCTTTCATGGAAGCCTGGCCAGTCTCACCATCCGCCCTGGCAAAATGGAAAGCCAGAAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 72 bp GTTGAACTCATTGCTAGTGTAGCGCCCATTGAGTTCTaGGCACTTAATCCGGAAACGCCGGGCCTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: VELIASVAPIEF*ALNPETPGLKG
Trigger: TCCCTTGAGGCCCGGCGTTTCCGGATTAAGTGCTCAGAACTCAATGGGCGCTACACTAGCAATGAGTTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS TCA 72 bp GGAGGACCATCACATAGGCATCTACCTCAGGGATACTaGTGCATACGTCTTCCCCAAAGCACTGGACTTTGG +
Preference number: 6 (lower is better)
Translates to: GGPSHRHLPQGY*CIRLPQSTGLW
Trigger: CCAAAGTCCAGTGCTTTGGGGAAGACGTATGCATCAGTATCCCTGAGGTAGATGCCTATGTGATGGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458420.7
CDS CCA 72 bp GCATGGCTATGTGAGATGGATGAATGGGCCAGTCGTTaGTCACCAGGTATGGTTCATATGTTGCTCCATCCA +
Preference number: 6 (lower is better)
Translates to: AWLCEMDEWASR*SPGMVHMLLHP
Trigger: TGGATGGAGCAACATATGAACCATACCTGGTGACCAACGACTGGCCCATTCATCCATCTCACATAGCCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 90 bp CTTCTGTCCACAGTCGTAGGCGGTCACCAGGATCTCATACTGGTGTaGTTTGTCATAGCTCAGCTTCTCAGTGTTCCTGATGTTGCCATT +
Preference number: 6 (lower is better)
Translates to: LLSTVVGGHQDLILV*FVIAQLLSVPDVAI
Trigger: AATGGCAACATCAGGAACACTGAGAAGCTGAGCTATGACAAACAACACCAGTATGAGATCCTGGTGACCGCCTACGACTGTGGACAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 72 bp GATCCTTTGAGGCATCCTCAGAGGAATAGCAGAAGTTaGGGACAGCTGACGAAAGGCAACTCCTGTTTTGTG +
Preference number: 6 (lower is better)
Translates to: DPLRHPQRNSRS*GQLTKGNSCFV
Trigger: CACAAAACAGGAGTTGCCTTTCGTCAGCTGTCCTCAACTTCTGCTATTCCTCTGAGGATGCCTCAAAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511524.1
CDS CAA 72 bp ACAGTCGTAGGCGGTCACCAGGATCTCATACTGGTGTaGTTTGTCATAGCTCAGCTTCTCAGTGTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: TVVGGHQDLILV*FVIAQLLSVPD
Trigger: ATCAGGAACACTGAGAAGCTGAGCTATGACAAACAACACCAGTATGAGATCCTGGTGACCGCCTACGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS CAA 72 bp TGGGCCAGTCGTTGGTCACCAGGTATGGTTCATATGTaGCTCCATCCATGTATAAGGTTACCACAGGAAACT +
Preference number: 6 (lower is better)
Translates to: WASRWSPGMVHM*LHPCIRLPQET
Trigger: AGTTTCCTGTGGTAACCTTATACATGGATGGAGCAACATATGAACCATACCTGGTGACCAACGACTGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458420.7
ENST00000511524.1
CDS TCA 72 bp ATCTTGCTTAGGAAGAAAACAAGAACACAGATCCTTTaGGGCATCCTCAGAGGAATAGCAGAAGTTGAGGAC +
Preference number: 6 (lower is better)
Translates to: ILLRKKTRTQIL*GILRGIAEVED
Trigger: GTCCTCAACTTCTGCTATTCCTCTGAGGATGCCTCAAAGGATCTGTGTTCTTGTTTTCTTCCTAAGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511524.1