RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLSPN (Homo sapiens)

Ensembl gene IDs: ENSG00000092853

Ensembl transcript IDs: ENST00000251195.9, ENST00000318121.8, ENST00000373220.7, ENST00000466308.1, ENST00000517467.1, ENST00000520551.1

Found 662 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTaGTCTAGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAG +
Preference number: 1 (lower is better)
Translates to: PCLAQILTPKGSQLW*SRVMQFCPDHRAIK
Trigger: CTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR TCA 90 bp GCCATAGTGGCAGGTCCTGGGGCTTCAATTTCATTAAAACATAACTaGTGCTGCTGGCTCAGTGCTTTGGGCAAAGGGCATATGGGTCAG +
Preference number: 1 (lower is better)
Translates to: AIVAGPGASISLKHN*CCWLSALGKGHMGQ
Trigger: CTGACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCATCAGTTATGTTTTAATGAAATTGAAGCCCCAGGACCTGCCACTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 90 bp ATGCTGCTGGCTCAGTGCTTTGGGCAAAGGGCATATGGGTCAGATTaGAACTGTCCATGTCAATCCTGTTACCAAGATCAAGGCTTAGCT +
Preference number: 1 (lower is better)
Translates to: MLLAQCFGQRAYGSD*NCPCQSCYQDQGLA
Trigger: AGCTAAGCCTTGATCTTGGTAACAGGATTGACATGGACAGTTTCAATCTGACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 90 bp GGGACAATTGCAGCAGCTTCTCAGTTTAGACCCAGAGGGTTTCCCTaGGATGGAGATAACCTGAAAATGAAATGCTCCTCAAGGTTAGAC +
Preference number: 1 (lower is better)
Translates to: GTIAAASQFRPRGFP*DGDNLKMKCSSRLD
Trigger: GTCTAACCTTGAGGAGCATTTCATTTTCAGGTTATCTCCATCCCAGGGAAACCCTCTGGGTCTAAACTGAGAAGCTGCTGCAATTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 90 bp GGAGATAACCTGAAAATGAAATGCTCCTCAAGGTTAGACAGGCACTaGCCCAAGAATGAGCATTCAAGCTGGACAGCAAATCTTCCCTTC +
Preference number: 1 (lower is better)
Translates to: GDNLKMKCSSRLDRH*PKNEHSSWTANLPF
Trigger: GAAGGGAAGATTTGCTGTCCAGCTTGAATGCTCATTCTTGGGTCAGTGCCTGTCTAACCTTGAGGAGCATTTCATTTTCAGGTTATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR GCA 90 bp TCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTaGCTTGGGAACTGTTTAGAGAGTTCAAAGAAAGAGGCAAAAACA +
Preference number: 1 (lower is better)
Translates to: SSLPAQFSFAQQGLL*LGNCLESSKKEAKT
Trigger: TGTTTTTGCCTCTTTCTTTGAACTCTCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 90 bp AACATAACTGATGCTGCTGGCTCAGTGCTTTGGGCAAAGGGCATATaGGTCAGATTGAAACTGTCCATGTCAATCCTGTTACCAAGATCA +
Preference number: 1 (lower is better)
Translates to: NITDAAGSVLWAKGI*VRLKLSMSILLPRS
Trigger: TGATCTTGGTAACAGGATTGACATGGACAGTTTCAATCTGACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCATCAGTTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 90 bp GAAAATGAAATGCTCCTCAAGGTTAGACAGGCACTGACCCAAGAATaGGCATTCAAGCTGGACAGCAAATCTTCCCTTCAAGGCATTAAG +
Preference number: 1 (lower is better)
Translates to: ENEMLLKVRQALTQE*AFKLDSKSSLQGIK
Trigger: CTTAATGCCTTGAAGGGAAGATTTGCTGTCCAGCTTGAATGCTCATTCTTGGGTCAGTGCCTGTCTAACCTTGAGGAGCATTTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 90 bp CCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTaGGAACTGTTTAGAGAGTTCAAAGAAAGAGGCAAAAACATGTAT +
Preference number: 1 (lower is better)
Translates to: PSCSVLFCPARATLP*ELFREFKERGKNMY
Trigger: ATACATGTTTTTGCCTCTTTCTTTGAACTCTCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 90 bp TGTCTGCAATCTTATTGCATTGATTATGAAAGAAGGAAGGATCATTaGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAA +
Preference number: 1 (lower is better)
Translates to: CLQSYCIDYERRKDH*LECQFQLSVLETSQ
Trigger: TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTTCCTTCTTTCATAATCAATGCAATAAGATTGCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCCACTTCAGGTTCCCCTaGCCTTCAGCCTGGGGTGAC +
Preference number: 2 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLHFRFP*PSAWGD
Trigger: GTCACCCCAGGCTGAAGGCCAGGGGAACCTGAAGTG...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR-3UTR TCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTAGTGACTCATGCATGTaGCCAGCACTTTGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCSDSCM*PALCGA
Trigger: GGCCCCACAAAGTGCTGGTCACATGCATGAGTCACT...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCCCTGGCCTTCAGCCTaGGGTGACCCAAATCCTCAC +
Preference number: 2 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGPWPSA*GDPNPH
Trigger: GTGAGGATTTGGGTCACCCCAGGCTGAAGGCCAGGG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR-3UTR TCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTGCACTGACCCAAGAATaGGCATTCAAGCTGGACAGC +
Preference number: 2 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCALTQE*AFKLDS
Trigger: GCTGTCCAGCTTGAATGCTCATTCTTGGGTCAGTGC...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR GCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCAGGGTTATGCAGTTCTaGCCAGACCACAGAGCCATA +
Preference number: 2 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLRVMQF*PDHRAI
Trigger: TATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR-3UTR GCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCCGAGATTGCGCCACTaGACTCCAGACTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLPRLRH*TPDWAT
Trigger: TGTTGCCCAGTCTGGAGTGCAGTGGCGCAATCTCGG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR TCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAGGCAGAGATTGTGGTaGGCCGAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTRQRLW*AEITPL
Trigger: CAGTGGCGTGATCTCGGCTCACCACAATCTCTGCCT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTAAAGCTGTAACAGGCTaGGCATGGTGGCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLKAVTG*AWWLSL
Trigger: CAGGCTCAGCCACCATGCCCAGCCTGTTACAGCTTT...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCGCTGGCTCAGTGCTTTaGGCAAAGGGCATATGGGTC +
Preference number: 2 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLAGSVL*AKGIWV
Trigger: GACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGC...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CAA 90 bp GATGCTGCTGGCTCAGTGCTTTGGGCAAAGGGCATATGGGTCAGATaGAAACTGTCCATGTCAATCCTGTTACCAAGATCAAGGCTTAGC +
Preference number: 2 (lower is better)
Translates to: DAAGSVLWAKGIWVR*KLSMSILLPRSRLS
Trigger: GCTAAGCCTTGATCTTGGTAACAGGATTGACATGGACAGTTTCAATCTGACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR TCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCGGCTCTCAGCTTTGGTaGTCTAGGGTTATGCAGTTC +
Preference number: 2 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGGSQLW*SRVMQF
Trigger: GAACTGCATAACCCTAGATCACCAAAGCTGAGAGCC...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR-3UTR CCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCAGCAGCCCATCTGTTaGTTCCTAGGTCCTCCATCT +
Preference number: 2 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLQQPIC*FLGPPS
Trigger: AGATGGAGGACCTAGGAACCAACAGATGGGCTGCTG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR TCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTGGTGGATGGATCATTTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLGGWII*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAATGATCCATCCACC...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR TCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTGGTCTCGAACTCCTaGGTTCAAGCAATGCACCCA +
Preference number: 2 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTLVSNS*VQAMHP
Trigger: TGGGTGCATTGCTTGAACTCAGGAGTTCGAGACCAG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAGGAGGCCGAGACGGGTaGATCACCTCAGGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEGGRDG*ITSGQE
Trigger: CTCCTGACCTGAGGTGATCCACCCGTCTCGGCCTCC...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR TCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCGAGGCAGAGTCTTTCTaGCTTGGGTACCAGTTTAAG +
Preference number: 2 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLEAESF*LGYQFK
Trigger: CTTAAACTGGTACCCAAGTCAGAAAGACTCTGCCTC...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR GCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCTGCTCAGTTCTCTTTTaGCCAGCAAGGGCTACTTTG +
Preference number: 2 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLCSVLF*PARATL
Trigger: CAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCA...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR GCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACCTGAGTTCAAGCAATaGACCCACCTCAGTCTCCTA +
Preference number: 2 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTPEFKQ*THLSLL
Trigger: TAGGAGACTGAGGTGGGTGCATTGCTTGAACTCAGG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAGTCTCCTAAAGTGCTaGCGTGAGCCACCGGACCTG +
Preference number: 2 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNSLLKC*REPPDL
Trigger: CAGGTCCGGTGGCTCACGCCAGCACTTTAGGAGACT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACCCCCACAGACTGTGGTaGACAAACACTGGGTGTAAC +
Preference number: 2 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNPHRLW*TNTGCN
Trigger: GTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGG...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAACTGCCCCACAGACTGTaGTGGACAAACACTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKELPHRL*WTNTGC
Trigger: ACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAG...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR TCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCAGAAGGGAGATCTTTaGACAACAGTGCTTCAAATT +
Preference number: 2 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLQKGDL*TTVLQI
Trigger: AATTTGAAGCACTGTTGTTCAAAGATCTCCCTTCTG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR GCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAGATGTCCAGAGCTGTaGAGTAGAAATCACTGGAAT +
Preference number: 2 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTRCPEL*SRNHWN
Trigger: ATTCCAGTGATTTCTACTGCACAGCTCTGGACATCT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAGAAGGAAGGATCATTaGCTGGAGTGTCAATTCCAA +
Preference number: 2 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTRRKDH*LECQFQ
Trigger: TTGGAATTGACACTCCAGCCAATGATCCTTCCTTCT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAATGAGCATTCAAGCTaGACAGCAAATCTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTNEHSS*TANLPF
Trigger: GAAGGGAAGATTTGCTGTCCAGCTTGAATGCTCATT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR GCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTCTTTCTCCAAAGAGTaGTTTCTCCCAGGAGCCTCA +
Preference number: 2 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNSFSKE*FLPGAS
Trigger: TGAGGCTCCTGGGAGAAAGCACTCTTTGGAGAAAGA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAACATATGCCTGTAATGTaGCCCAGCTATTCCAAAGGT +
Preference number: 2 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEHMPVM*PSYSKG
Trigger: ACCTTTGGAATAGCTGGGCCACATTACAGGCATATG...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR GCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAACCTGAAAATGAAATaGTCCTCAAGGTTAGACAGG +
Preference number: 2 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNNLKMK*SSRLDR
Trigger: CCTGTCTAACCTTGAGGAGCATTTCATTTTCAGGTT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CAA 90 bp TGGTGGCCTTCTCTCAAAATTAGTAATGAAATGCTGAAATGTCCATaGATTAGTGAGGGCAATGTATGTAAGCCAGAAGAATGCAATAAA +
Preference number: 2 (lower is better)
Translates to: WWPSLKISNEMLKCP*ISEGNVCKPEECNK
Trigger: TTTATTGCATTCTTCTGGCTTACATACATTGCCCTCACTAATCAATGGACATTTCAGCATTTCATTACTAATTTTGAGAGAAGGCCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CAA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTACTTCTCCGCCTCTCTTaGGACTCTGTCTCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLLLRLS*DSVSPS
Trigger: GCTGGGAGAGACAGAGTCCAAAGAGAGGCGGAGAAG...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR CCA 72 bp AGTCTTCTCCCTTCCCTTATCCACTTCAGGTTCCCCTaGCCTTCAGCCTGGGGTGACCCAAATCCTCACTTT +
Preference number: 3 (lower is better)
Translates to: SLLPSLIHFRFP*PSAWGDPNPHF
Trigger: AAAGTGAGGATTTGGGTCACCCCAGGCTGAAGGCCAGGGGAACCTGAAGTGGATAAGGGAAGGGAGAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR TCA 72 bp GCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTaGTCTAGGGTTATGCAGTTCTGCCCAGACCACAGA +
Preference number: 3 (lower is better)
Translates to: AQILTPKGSQLW*SRVMQFCPDHR
Trigger: TCTGTGGTCTGGGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACGGGGTTTCACCTTGTaGGTCAGTCTGGTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTRGFTL*VSLVSN
Trigger: GTTGGAGACCAGACTGACCAACAAGGTGAAACCCCG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 72 bp GCAGGTCCTGGGGCTTCAATTTCATTAAAACATAACTaGTGCTGCTGGCTCAGTGCTTTGGGCAAAGGGCAT +
Preference number: 3 (lower is better)
Translates to: AGPGASISLKHN*CCWLSALGKGH
Trigger: ATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCATCAGTTATGTTTTAATGAAATTGAAGCCCCAGGACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 72 bp GCAGCAGCTTCTCAGTTTAGACCCAGAGGGTTTCCCTaGGATGGAGATAACCTGAAAATGAAATGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: AAASQFRPRGFP*DGDNLKMKCSS
Trigger: TGAGGAGCATTTCATTTTCAGGTTATCTCCATCCCAGGGAAACCCTCTGGGTCTAAACTGAGAAGCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 72 bp GATGCTGCTGGCTCAGTGCTTTGGGCAAAGGGCATATaGGTCAGATTGAAACTGTCCATGTCAATCCTGTTA +
Preference number: 3 (lower is better)
Translates to: DAAGSVLWAKGI*VRLKLSMSILL
Trigger: TAACAGGATTGACATGGACAGTTTCAATCTGACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAAGGAGGAGAATCGCTaGAACCTGGGAGGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTKEENR*NLGGRD
Trigger: ATCTCTGCCTCCCAGGTTCAAGCGATTCTCCTCCTT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CAA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCTGTAATCCCTGCTATTaGGGAGGCCGAGGCAGAATT +
Preference number: 3 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLCNPCY*GGRGRI
Trigger: AATTCTGCCTCGGCCTCCCAAATAGCAGGGATTACA...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CAA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCCAGCAAGGGCTACTTaGCCTTGGGAACTGTTTAGA +
Preference number: 3 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLPARAT*PWELFR
Trigger: TCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 72 bp ATGCTCCTCAAGGTTAGACAGGCACTGACCCAAGAATaGGCATTCAAGCTGGACAGCAAATCTTCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: MLLKVRQALTQE*AFKLDSKSSLQ
Trigger: TTGAAGGGAAGATTTGCTGTCCAGCTTGAATGCTCATTCTTGGGTCAGTGCCTGTCTAACCTTGAGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR GCA 72 bp CCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTaGCTTGGGAACTGTTTAGAGAGTTCAAAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PAQFSFAQQGLL*LGNCLESSKKE
Trigger: CTCTTTCTTTGAACTCTCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 72 bp AAACTTTGCACACTCCTCCAGCTAAGAAAATACAGGTaGAGACGTCAGCCCCATTTCTACATCAGATCCTGT +
Preference number: 3 (lower is better)
Translates to: KLCTLLQLRKYR*RRQPHFYIRSC
Trigger: ACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAGCTGGAGGAGTGTGCAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
3UTR TCA 72 bp CTGAAAATGAAATGCTCCTCAAGGTTAGACAGGCACTaGCCCAAGAATGAGCATTCAAGCTGGACAGCAAAT +
Preference number: 3 (lower is better)
Translates to: LKMKCSSRLDRH*PKNEHSSWTAN
Trigger: ATTTGCTGTCCAGCTTGAATGCTCATTCTTGGGTCAGTGCCTGTCTAACCTTGAGGAGCATTTCATTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 72 bp TCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTaGGAACTGTTTAGAGAGTTCAAAGAAAGAGGCAAA +
Preference number: 3 (lower is better)
Translates to: SVLFCPARATLP*ELFREFKERGK
Trigger: TTTGCCTCTTTCTTTGAACTCTCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CCA 72 bp AAAAGAAATCTTTCTTTCACCGAGCCCTGGTCATCATaGTACGTATCTCATGGGTGTAAAGGAGTCATTATG +
Preference number: 3 (lower is better)
Translates to: KRNLSFTEPWSS*YVSHGCKGVIM
Trigger: CATAATGACTCCTTTACACCCATGAGATACGTACCATGATGACCAGGGCTCGGTGAAAGAAAGATTTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACCAGAGTCTTTCTGACTaGGGTACCAGTTTAAGTCCT +
Preference number: 3 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNQSLSD*GTSLSP
Trigger: AGGACTTAAACTGGTACCCAAGTCAGAAAGACTCTG...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 72 bp TATGTTTCTTCTTGTCAGACCCAGAAGGGAGATCTTTaGACAACAGTGCTTCAAATTGAGAATTCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: YVSSCQTQKGDL*TTVLQIENSVP
Trigger: TGGGACTGAATTCTCAATTTGAAGCACTGTTGTTCAAAGATCTCCCTTCTGGGTCTGACAAGAAGAAACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR TCA 72 bp GATATAAGGGTAGAAGATACAATACCATCTCAAGGATaGCATAATCAAATAGTATCATGGGAACACTCCTCC +
Preference number: 3 (lower is better)
Translates to: DIRVEDTIPSQG*HNQIVSWEHSS
Trigger: GGAGGAGTGTTCCCATGATACTATTTGATTATGTCATCCTTGAGATGGTATTGTATCTTCTACCCTTATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGCCACCTCGCCTGTCATaGCTTCTGCCTCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGPPRLS*LLPPLR
Trigger: GCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGG...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTCCACCTCGCCTGTCATaGCTTCTGCCTCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCPPRLS*LLPPLR
Trigger: GCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGG...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGGCCTGTCATGACTTCTaGCTCCCCTGCGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGACHDF*LPCAPL
Trigger: TAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGC...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAGTGCTTGGCGCTTCTaGCGCTCCTCAAACCTTCGG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGSAWRF*RSSNLR
Trigger: CCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTACCCTGGCCTTCAGCCTaGGGTGACCCAAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLPWPSA*GDPNPH
Trigger: GTGAGGATTTGGGTCACCCCAGGCTGAAGGCCAGGG...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAGAGCAGCCAGTTTCTaGAGCACAGCTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGRAASF*STALGW
Trigger: CCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCTCT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGCCATGGCATTTCCGTaGCAAGTGGGCCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLAMAFP*QVGRGL
Trigger: TAAACCCCGGCCCACTTGCCACGGAAATGCCATGGC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGGCCCTGTCCACTATCTaGAGGACTATCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGALSTI*RTICFL
Trigger: GAGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGC...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTCACCCTCCAGGGCATaGGGTTCAAATGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGSPSRA*GSNATS
Trigger: GCTTGTAGCATTTGAACCTCATGCCCTGGAGGGTGA...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCCACTTCAGGTTCCCCTaGCCTTCAGCCTGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLHFRFP*PSAWGD
Trigger: GTCACCCCAGGCTGAAGGCCAGGGGAACCTGAAGTG...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTGGAGGCCGAGACGGGTaGATCACCTCAGGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLGGRDG*ITSGQE
Trigger: CTCCTGACCTGAGGTGATCCACCCGTCTCGGCCTCC...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCACCTCGCCTGTCATaGCTTCTGCCTCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKPPRLS*LLPPLR
Trigger: GCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCACCTCGCCTGTCATaGCTTCTGCCTCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSPPRLS*LLPPLR
Trigger: GCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTATTCACATTCACTGTCTaGCCAGCCCTGGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLFTFTV*PALGLA
Trigger: AGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAA...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTCCCACATCACTTCCTaGCACCTCTGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASHITS*HLCLIL
Trigger: GAGGATGAGGCAGAGGTGTCAGGAAGTGATGTGGGA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTACCTGTCTTCACCTGTTaGGCACTTCCTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLPVFTC*ALPGLM
Trigger: CATCAGACCAGGAAGTGCTCAACAGGTGAAGACAGG...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCCAGGACCATCGCTGTaGAGATCCCCATCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGPGPSL*RSPSAR
Trigger: CCTTGCTGATGGGGATCTGCACAGCGATGGTCCTGG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTAAATTTTCCCCTGCTGTaGCATGTCCCGAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLNFPLL*HVPKPL
Trigger: CAGTGGCTTCGGGACATGGCACAGCAGGGGAAAATT...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTATTCTCCGCCTCTCTTTaGACTCTGTCTCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLFSASL*TLSLPA
Trigger: AGCTGGGAGAGACAGAGTCCAAAGAGAGGCGGAGAA...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTATTGCCGCCTCAGCCTTaGCAGGAGAAAGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLLPPQP*QEKVYE
Trigger: TTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAA...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCAGGCAGAGATTGTGGTaGGCCGAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLRQRLW*AEITPL
Trigger: CAGTGGCGTGATCTCGGCTCACCACAATCTCTGCCT...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAAGTTGGATTCCTGTTaGAACACTGAGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGKLDSC*NTELSP
Trigger: TGGGGACAGCTCAGTGTTGCAACAGGAATCCAACTT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGCTGCTGGATTAGCATaGTTCCAGAAACGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLAAGLA*FQKRCF
Trigger: GAAGCAGCGTTTCTGGAAGCATGCTAATCCAGCAGC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCAGCCCTGGGTTTGGCTaGTGGATTAGCATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASPGFG*WISMLP
Trigger: TGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCT...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTCCAGGACCATCGCTGTaGAGATCCCCATCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLPGPSL*RSPSAR
Trigger: CCTTGCTGATGGGGATCTGCACAGCGATGGTCCTGG...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTAAGGGTTATGCAGTTCTaGCCAGACCACAGAGCCATA +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLRVMQF*PDHRAI
Trigger: TATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTAGGTGATCTAGGGTTATaGAGTTCTGCCCAGACCACA +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLGDLGL*SSAQTT
Trigger: TGTGGTCTGGGCAGAACTGCATAACCCTAGATCACC...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTGCCATGGCATTTCCGTaGCAAGTGGGCCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLAMAFP*QVGRGL
Trigger: TAAACCCCGGCCCACTTGCCACGGAAATGCCATGGC...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGACTTCAATAGTGCCATaGCATTTCCGTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGTSIVP*HFRGKW
Trigger: CCACTTGCCACGGAAATGCCATGGCACTATTGAAGT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGGCAAGGTACCTCTCTTaGTATAAACGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGARYLS*YKRSCR
Trigger: GCGACAGCTACGTTTATACCAAGAGAGGTACCTTGC...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCAGCACAGCTTTGGGCTaGTTTAGCAGTGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASTALG*FSSEPV
Trigger: GACAGGCTCACTGCTAAACCAGCCCAAAGCTGTGCT...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTATCTGAAGCACAGCTTTaGGCTGGTTTAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLSEAQL*AGLAVS
Trigger: GCTCACTGCTAAACCAGCCCAAAGCTGTGCTTCAGA...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCGGAGCACTGGGGTTATaGTCAGAGAGAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLGALGL*SERAAS
Trigger: ACTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCC...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTAACTTCCTTCCTCAAATaGATGGACCCCACTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLTSFLK*MDPTLQ
Trigger: TTGGAGAGTGGGGTCCATTCATTTGAGGAAGGAAGT...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCTCTCGAATAAGGCGCTaGGTCTCACTATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLSRIRR*VSLCSC
Trigger: ACAACTGCATAGTGAGACTCAGCGCCTTATTCGAGA...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTACCTGCAAGACTCATCTaGTCCAGTAATGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLPARLI*SSNDLG
Trigger: ACCCAGATCATTACTGGATCAGATGAGTCTTGCAGG...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTCCCACATCACTTCCTaGCACCTCTGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLSHITS*HLCLIL
Trigger: GAGGATGAGGCAGAGGTGTCAGGAAGTGATGTGGGA...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCTTGGTCTTGATCTCCTaGCCTTGTGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLLVLIS*PCDPPT
Trigger: GGTGGGTGGATCACAAGGTCAGGAGATCAAGACCAA...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTGGTCAGGTTGGTCTTaGTCTCCTGACCTTGTGATC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAWSGWS*SPDLVI
Trigger: GATCACAAGGTCAGGAGATCAAGACCAACCTGACCA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTAGTGACTCATGCATGTaGCCAGCACTTTGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLSDSCM*PALCGA
Trigger: GGCCCCACAAAGTGCTGGTCACATGCATGAGTCACT...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTGGTGGCTGAGCCTGTaGCCCCAGCATTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSWWLSL*PQHFGR
Trigger: CCTCCCAAAATGCTGGGGTCACAGGCTCAGCCACCA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGATATGGAAGGTTCAGTaGAGACTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGIWKVQ*RLSNKA
Trigger: CGCCTTATTCGAGAGTCTGCACTGAACCTTCCATAT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTCTGCACCTGTTGTCTaGTCAGAACCTTTACTATGG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGSAPVV*SEPLLW
Trigger: CCATAGTAAAGGTTCTGAGCAGACAACAGGTGCAGA...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCGGCATGAGGTTCAAATaGTACAAGCCCTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAGMRFK*YKPSNL
Trigger: CAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCC...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCTTCCAGAAACGCTaGTTCAAGGCTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLCFQKR*FKASSS
Trigger: AGAACTGGAAGCCTTGAAGCAGCGTTTCTGGAAGCA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGAAGCCAACTGCCTTaGCAATTTCACTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLGSQLP*QFHYCH
Trigger: ATGGCAGTAGTGAAATTGGCAAGGCAGTTGGCTTCC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGSCYCG*SPLLAM
Trigger: CATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCGGCCTGTTTGTCTGTTaGAAGGCTGATAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLGLFVC*KADRME
Trigger: TTCCATCCTATCAGCCTTGCAACAGACAAACAGGCC...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCGCTGTAATTTTCCCCTaGTGTGCCATGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLAVIFP*CAMSRS
Trigger: GCTTCGGGACATGGCACAGCAGGGGAAAATTACAGC...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTGCTGTAATTTTCCCCTaGTGTGCCATGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLAVIFP*CAMSRS
Trigger: GCTTCGGGACATGGCACAGCAGGGGAAAATTACAGC...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTTAGACGATTCCTTTaGCGCCTCAGCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGLRRFL*RLSLDR
Trigger: CCTGTCAAGGCTGAGGCGGCAAAGGAATCGTCTAAG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGTTCCCGAGGAAGTTaGATTCCTGTTGCAACACTG +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLCSRGS*IPVATL
Trigger: CAGTGTTGCAACAGGAATCCAACTTCCTCGGGAACA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATCACCTGGTTTTGTGTaGCTTGCTCCATCCAACTTC +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLSPGFV*LAPSNF
Trigger: GAAGTTGGATGGAGCAAGCCACACAAAACCAGGTGA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAGTGCTTGGCGCTTCTaGCGCTCCTCAAACCTTCGG +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTSAWRF*RSSNLR
Trigger: CCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGATAGGATGGAATCGTaGAGCCAATCAGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLDRMES*SQSAQS
Trigger: GCTTTGAGCTGATTGGCTCCACGATTCCATCCTATC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCAAGTGTCTTAGGCTCTaGGGAGGCGTTATACAGATC +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLKCLRL*GGVIQI
Trigger: GATCTGTATAACGCCTCCCCAGAGCCTAAGACACTT...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCGCTCCTTCCTCCACCTaGCTTCTGACTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGAPSST*LLTHQA
Trigger: AGCTTGATGAGTCAGAAGCCAGGTGGAGGAAGGAGC...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTCTGTTGAGCACTTCCTaGTCTGATGGCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCLLSTS*SDGFKR
Trigger: CCTTTTGAAGCCATCAGACCAGGAAGTGCTCAACAG...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCGGAGCACTGGGGTTATaGTCAGAGAGAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLGALGL*SERAAS
Trigger: ACTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCC...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTACTACATCAGATCCTGTaGCCTAAGTCTTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLLHQIL*PKSSPF
Trigger: GAAGGGAGAAGACTTAGGCCACAGGATCTGATGTAG...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTCAGCAGCCCATCTGTTaGTTCCTAGGTCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLQQPIC*FLGPPS
Trigger: AGATGGAGGACCTAGGAACCAACAGATGGGCTGCTG...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CAA 72 bp CAATTCACTAGGACTGAGAAGCCAGTGAGGGGACAATaGCAGCAGCTTCTCAGTTTAGACCCAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QFTRTEKPVRGQ*QQLLSLDPEGF
Trigger: GAAACCCTCTGGGTCTAAACTGAGAAGCTGCTGCAATTGTCCCCTCACTGGCTTCTCAGTCCTAGTGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTCATTGATTTCTAGGTaGACCTCAGAACCCACCTCG +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASLISR*TSEPTS
Trigger: CGAGGTGGGTTCTGAGGTTCACCTAGAAATCAATGA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGATCTGCTTCCTCTTGTaGAATGACGTTTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGICFLL*NDVWVI
Trigger: AATGACCCAAACGTCATTTCACAAGAGGAAGCAGAT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGATCTGGGTTTCCTTTaGAACTACAGGGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLDLGFL*NYRECI
Trigger: AATGCACTCCCTGTAGTTTCAAAGGAAACCCAGATC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTTCCAACAGTTGGCTCTaGGTGTCATCTTCTAAACAG +
Preference number: 4 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCSNSWL*VSSSKQ
Trigger: CTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGA...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCAGCTGTTCTTCAGTCTaGTCATCATCAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLSCSSV*SSSESL
Trigger: CAGAGACTCTGATGATGATCAGACTGAAGAACAGCT...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAAAGACTTTGATTCCTaGATAACCATAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGKDFDS*ITIGRL
Trigger: CAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCGAGCACTTCCTGGTCTaGTGGCTTCAAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAEHFLV*WLQKDF
Trigger: GAAATCCTTTTGAAGCCATCAGACCAGGAAGTGCTC...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTATTATCCTCTTCACCTaGGCTGAACCCAAACCACTT +
Preference number: 4 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCIILFT*AEPKPL
Trigger: AAGTGGTTTGGGTTCAGCTCAGGTGAAGAGGATAAT...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTCTGGTCTCGAACTCCTaGGTTCAAGCAATGCACCCA +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLLVSNS*VQAMHP
Trigger: TGGGTGCATTGCTTGAACTCAGGAGTTCGAGACCAG...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGCCTGTCATGACTTCTaGCTCCCCTGCGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSACHDF*LPCAPL
Trigger: TAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCCTGTCATGACTTCTaGCTCCCCTGCGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKACHDF*LPCAPL
Trigger: TAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTATATGGAAGGTTCAGTaGAGACTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCIWKVQ*RLSNKA
Trigger: CGCCTTATTCGAGAGTCTGCACTGAACCTTCCATAT...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTGGCATGAGGTTCAAATaGTACAAGCCCTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLGMRFK*YKPSNL
Trigger: CAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCC...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAAGAGAGGAAGCCAACTaGCTTGCCAATTTCACTACT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLREEAN*LANFTT
Trigger: AGTAGTGAAATTGGCAAGGCAGTTGGCTTCCTCTCT...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCCATTGGATCACCCATaGTGCTCTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGPLDHP*CSPSPV
Trigger: AACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTCCATTGGATCACCCATaGTGCTCTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLPLDHP*CSPSPV
Trigger: AACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGG...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCAGGACCATCGCTGTaGAGATCCCCATCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSPGPSL*RSPSAR
Trigger: CCTTGCTGATGGGGATCTGCACAGCGATGGTCCTGG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTCTTAGACGATTCCTTTaGCGCCTCAGCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLLRRFL*RLSLDR
Trigger: CCTGTCAAGGCTGAGGCGGCAAAGGAATCGTCTAAG...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCAGGAAGGGTCTCTCTaGCCCACAGACTGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSQEGSL*PTDCGG
Trigger: TCCACCACAGTCTGTGGGGCAGAGAGACCCTTCCTG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGGTGCCTGTAATCCCTaGTATTTGGGAGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSGACNP*YLGGRG
Trigger: GCCTCGGCCTCCCAAATAGCAGGGATTACAGGCACC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTACCTTCCTCAAATGAATaGACCCCACTCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLPSSNE*TPLSKD
Trigger: ATCTTTGGAGAGTGGGGTCCATTCATTTGAGGAAGG...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTACTCAGGCATATGATATaGAAGGTTCAGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLLRHMI*KVQCRL
Trigger: GAGTCTGCACTGAACCTTCCATATCATATGCCTGAG...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCCATGGCATTTCCGTaGCAAGTGGGCCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKAMAFP*QVGRGL
Trigger: TAAACCCCGGCCCACTTGCCACGGAAATGCCATGGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGCCATGGCATTTCCGTaGCAAGTGGGCCGGGGTTTA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSAMAFP*QVGRGL
Trigger: TAAACCCCGGCCCACTTGCCACGGAAATGCCATGGC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCTGAAGCTTTTCACCTaGTTTTGTGTGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSALKLFT*FCVACS
Trigger: GGAGCAAGCCACACAAAACCAGGTGAAAAGCTTCAG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAGTGCTTGGCGCTTCTaGCGCTCCTCAAACCTTCGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSAWRF*RSSNLR
Trigger: CCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCGCAAGGCTGATAGGATaGAATCGTGGAGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGARLIG*NRGANQ
Trigger: CTGATTGGCTCCACGATTCCATCCTATCAGCCTTGC...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTATCTTCTAAACAGAACTaGAAGTCTCCTGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLSSKQN*KSPAPR
Trigger: CCTAGGAGCAGGAGACTTCCAGTTCTGTTTAGAAGA...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCATCCATACTGGCCAATaGCAATCGAGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAIHTGQ*QSRLQS
Trigger: GCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGAT...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCCATGTTGGCATCCATaGCATTCTCATCCATACTGG +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAPCWHP*HSHPYW
Trigger: CCAGTATGGATGAGAATGCCATGGATGCCAACATGG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCCTCTTCCTTGTCTGTaGGAAAAGAGCCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAPLPCL*EKSLSK
Trigger: TTTGCTCAGGCTCTTTTCCCACAGACAAGGAAGAGG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCTGTTGAGCACTTCCTaGTCTGATGGCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSALLSTS*SDGFKR
Trigger: CCTTTTGAAGCCATCAGACCAGGAAGTGCTCAACAG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAGCCCTGTCCACTATCTaGAGGACTATCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTALSTI*RTICFL
Trigger: GAGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGC...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGCCGGGGTTTACGTTTaGAGAAATCATGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLAGVYV*RNHEWF
Trigger: AAACCATTCATGATTTCTTCAAACGTAAACCCCGGC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCCCACATCACTTCCTaGCACCTCTGCCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSHITS*HLCLIL
Trigger: GAGGATGAGGCAGAGGTGTCAGGAAGTGATGTGGGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAGAGCAGCCAGTTTCTaGAGCACAGCTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSRAASF*STALGW
Trigger: CCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCTCT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGAGCAGCCAGTTTCTaGAGCACAGCTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKRAASF*STALGW
Trigger: CCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCTCT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAGCCTGTCATGACTTCTaGCTCCCCTGCGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQACHDF*LPCAPL
Trigger: TAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGC...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCTTACCAAATCCTTCCTaGAAGACTCATCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLLPNPS*KTHLIQ
Trigger: CTGGATCAGATGAGTCTTGCAGGAAGGATTTGGTAA...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTCCAGTTTGCTAGGCTaGTTGCCTGAGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASSLLG*LPEFSS
Trigger: AGATGAAAACTCAGGCAAGCAGCCTAGCAAACTGGA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCAATCAGCTCAAAGCTaGTATTGTGGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGQSAQS*YCGCSP
Trigger: AGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTTCATGGTCTTCCAGTaGCAGATCATTACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAFMVFQ*QIITRV
Trigger: GACTCTGGTAATGATCTGGCACTGGAAGACCATGAA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTATGTCCCGAAGCCACTaGTCTCGTTCAATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCMSRSH*SRSIRS
Trigger: GGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACAT...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAATGTCCCGAAGCCACTaGTCTCGTTCAATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTMSRSH*SRSIRS
Trigger: GGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACAT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTAGGCATTCTTCTGCAGTaGTTTGGCTGTAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLGILLQ*FGCNFL
Trigger: AAGAAAGTTACAGCCAAAGCACTGCAGAAGAATGCC...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCCTGAGTTCAAGCAATaGACCCACCTCAGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLPEFKQ*THLSLL
Trigger: TAGGAGACTGAGGTGGGTGCATTGCTTGAACTCAGG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGGCCACTGTCATTAAATaGCTGTTCTACATCATCTTC +
Preference number: 4 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGATVIK*LFYIIF
Trigger: GAAGATGATGTAGAACAGCCATTTAATGACAGTGGC...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTCATCTGTTTCTTCTaGATTTTGGGGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGLICFF*ILGAFT
Trigger: GGTGAAGGCCCCCAAAATCCAGAAGAAACAGATGAG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTGCTTGGCGCTTCTaGCGCTCCTCAAACCTTCGG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSAWRF*RSSNLR
Trigger: CCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCAATTTAAACAGTGCTTaGCGCTTCTGGCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGNLNSA*RFWRSS
Trigger: TGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATT...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTAATTTAAACAGTGCTTaGCGCTTCTGGCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLNLNSA*RFWRSS
Trigger: TGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATT...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCATTCTCATCCATACTaGCCAATGGCAATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGHSHPY*PMAIEA
Trigger: AGCCTCGATTGCCATTGGCCAGTATGGATGAGAATG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATCATCATCATCTTCATaGTCTTCCAGTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLSSSSS*SSSARS
Trigger: TGATCTGGCACTGGAAGACCATGAAGATGATGATGA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGGAGCACTGGGGTTATaGTCAGAGAGAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSGALGL*SERAAS
Trigger: ACTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGGAGCACTGGGGTTATaGTCAGAGAGAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSGALGL*SERAAS
Trigger: ACTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCAATTTCGAGGAGCACTaGGGTTATGGTCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGNFEEH*GYGQRE
Trigger: CTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATT...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTGCCCCACAGACTGTaGTGGACAAACACTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKLPHRL*WTNTGC
Trigger: ACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAAAGCTGTAACAGGCTaGGCATGGTGGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSKAVTG*AWWLSL
Trigger: CAGGCTCAGCCACCATGCCCAGCCTGTTACAGCTTT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGCCCTGTCCACTATCTaGAGGACTATCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSALSTI*RTICFL
Trigger: GAGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCCCTGTCCACTATCTaGAGGACTATCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSALSTI*RTICFL
Trigger: GAGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAAAATATCTCTTCATCTaGATCTCCTTCACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLKYLFI*ISFTQG
Trigger: CCCTTGAGTGAAGGAGATTCAGATGAAGAGATATTT...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCACCCTCCAGGGCATaGGGTTCAAATGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSPSRA*GSNATS
Trigger: GCTTGTAGCATTTGAACCTCATGCCCTGGAGGGTGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTCACCCTCCAGGGCATaGGGTTCAAATGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSSPSRA*GSNATS
Trigger: GCTTGTAGCATTTGAACCTCATGCCCTGGAGGGTGA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTTCACATTCACTGTCTaGCCAGCCCTGGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSFTFTV*PALGLA
Trigger: AGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTCACATTCACTGTCTaGCCAGCCCTGGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSFTFTV*PALGLA
Trigger: AGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR TCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCTCCAACAGTTGGCTCTaGGTGTCATCTTCTAAACAG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGSNSWL*VSSSKQ
Trigger: CTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGA...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATTTCAGCCTGAGATGTaGACTTTCCAGTACACAAAT +
Preference number: 4 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLFQPEM*TFQYTN
Trigger: ATTTGTGTACTGGAAAGTTCACATCTCAGGCTGAAA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCGCCAGTATCATAAACTaGCTGTCCTCCCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGASIIN*LSSPIS
Trigger: AGAAATTGGGGAGGACAGTCAGTTTATGATACTGGC...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCTGTCTTCACCTGTTaGGCACTTCCTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSPVFTC*ALPGLM
Trigger: CATCAGACCAGGAAGTGCTCAACAGGTGAAGACAGG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCCTGTCTTCACCTGTTaGGCACTTCCTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSPVFTC*ALPGLM
Trigger: CATCAGACCAGGAAGTGCTCAACAGGTGAAGACAGG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCCTGTCTTCACCTGTTaGGCACTTCCTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSPVFTC*ALPGLM
Trigger: CATCAGACCAGGAAGTGCTCAACAGGTGAAGACAGG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGCAGCCAGTTTCTaGAGCACAGCTTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQRAASF*STALGW
Trigger: CCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCTCT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCAAAGACAAAGTTTCTTaGATTTCGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAKDKVS*ISRSTG
Trigger: CCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTT...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTGGCTCTCAGCTTTGGTaGTCTAGGGTTATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCGSQLW*SRVMQF
Trigger: GAACTGCATAACCCTAGATCACCAAAGCTGAGAGCC...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTGTGAAGGAGAAGTCATaGAAGATGGACCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLVKEKS*KMDPFS
Trigger: AGAAAAGGGGTCCATCTTTCATGACTTCTCCTTCAC...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACATTTCCAAAGCAGCACTaGTGCTCAGTTCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTFPKQH*CSVLRG
Trigger: TCCCCTCAGAACTGAGCATCAGTGCTGCTTTGGAAA...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGCACTGACCCAAGAATaGGCATTCAAGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQALTQE*AFKLDS
Trigger: GCTGTCCAGCTTGAATGCTCATTCTTGGGTCAGTGC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCAAGTTGGATTCCTGTTaGAACACTGAGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLKLDSC*NTELSP
Trigger: TGGGGACAGCTCAGTGTTGCAACAGGAATCCAACTT...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAGCCCTGGGTTTGGCTaGTGGATTAGCATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSPGFG*WISMLP
Trigger: TGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCTGGTTTTGTGTGGCTTaGTCCATCCAACTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLWFCVA*SIQLLR
Trigger: CCTAAGAAGTTGGATGGAGCAAGCCACACAAAACCA...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCTTGGATCACCCATGCTaGTCTCCTTCTCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGLDHPC*SPSPVY
Trigger: ATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAA...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTTTGGATCACCCATGCTaGTCTCCTTCTCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLLDHPC*SPSPVY
Trigger: ATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAA...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTATGTCCCGAAGCCACTaGTCTCGTTCAATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSMSRSH*SRSIRS
Trigger: GGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACAT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTATGTCCCGAAGCCACTaGTCTCGTTCAATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSMSRSH*SRSIRS
Trigger: GGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACAT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAATTTTCCCCTGCTGTaGCATGTCCCGAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSNFPLL*HVPKPL
Trigger: CAGTGGCTTCGGGACATGGCACAGCAGGGGAAAATT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAATTTTCCCCTGCTGTaGCATGTCCCGAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKNFPLL*HVPKPL
Trigger: CAGTGGCTTCGGGACATGGCACAGCAGGGGAAAATT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAATTTTCCCCTGCTGTaGCATGTCCCGAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQNFPLL*HVPKPL
Trigger: CAGTGGCTTCGGGACATGGCACAGCAGGGGAAAATT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCTGTAATTTTCCCCTaGTGTGCCATGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKAVIFP*CAMSRS
Trigger: GCTTCGGGACATGGCACAGCAGGGGAAAATTACAGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCTGTAATTTTCCCCTaGTGTGCCATGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSAVIFP*CAMSRS
Trigger: GCTTCGGGACATGGCACAGCAGGGGAAAATTACAGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCTTAGACGATTCCTTTaGCGCCTCAGCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQLRRFL*RLSLDR
Trigger: CCTGTCAAGGCTGAGGCGGCAAAGGAATCGTCTAAG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTTAGACGATTCCTTTaGCGCCTCAGCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLRRFL*RLSLDR
Trigger: CCTGTCAAGGCTGAGGCGGCAAAGGAATCGTCTAAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACCCGAGATTGCGCCACTaGACTCCAGACTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNPRLRH*TPDWAT
Trigger: TGTTGCCCAGTCTGGAGTGCAGTGGCGCAATCTCGG...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCTCATCTGTTTCTTCTaGATTTTGGGGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLLICFF*ILGAFT
Trigger: GGTGAAGGCCCCCAAAATCCAGAAGAAACAGATGAG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCGCGTTATACAGATCCTaGGAATCCTCTATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGALYRS*ESSMGS
Trigger: ACTTCCCATAGAGGATTCCCAGGATCTGTATAACGC...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTGCGTTATACAGATCCTaGGAATCCTCTATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLALYRS*ESSMGS
Trigger: ACTTCCCATAGAGGATTCCCAGGATCTGTATAACGC...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTAAGTGTCTTAGGCTCTaGGGAGGCGTTATACAGATC +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLKCLRL*GGVIQI
Trigger: GATCTGTATAACGCCTCCCCAGAGCCTAAGACACTT...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCACAGCTCATCCATGTTaGCATCCATGGCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGTAHPC*HPWHSH
Trigger: ATGAGAATGCCATGGATGCCAACATGGATGAGCTGT...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTGCAAGGTACCTCTCTTaGTATAAACGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLARYLS*YKRSCR
Trigger: GCGACAGCTACGTTTATACCAAGAGAGGTACCTTGC...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCTGGAACAAGTCCATCTaGGAAGCATCATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLWNKSI*EASSMF
Trigger: AAACATAGATGATGCTTCCCAGATGGACTTGTTCCA...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCTCATCAGAGTCTCTGTaGAACAAGTCCATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLSSESL*NKSIWE
Trigger: TTCCCAGATGGACTTGTTCCACAGAGACTCTGATGA...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTTCATCAGAGTCTCTGTaGAACAAGTCCATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLSSESL*NKSIWE
Trigger: TTCCCAGATGGACTTGTTCCACAGAGACTCTGATGA...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCTCCTTCCTCCACCTaGCTTCTGACTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSAPSST*LLTHQA
Trigger: AGCTTGATGAGTCAGAAGCCAGGTGGAGGAAGGAGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGCTCCTTCCTCCACCTaGCTTCTGACTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSAPSST*LLTHQA
Trigger: AGCTTGATGAGTCAGAAGCCAGGTGGAGGAAGGAGC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAGCACAGCTTTGGGCTaGTTTAGCAGTGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSTALG*FSSEPV
Trigger: GACAGGCTCACTGCTAAACCAGCCCAAAGCTGTGCT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCCTAAGAAAATACAGGTaGAGACGTCAGCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLLRKYR*RRQPHF
Trigger: GAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTAATTTGATGCTGCCTTaGGAAGAAGCATACAGGAAA +
Preference number: 4 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCNLMLP*EEAYRK
Trigger: TTTCCTGTATGCTTCTTCCCAAGGCAGCATCAAATT...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCTGGGCAAAGGGCATATaGGTCAGATTGAAACTGTCC +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLWAKGI*VRLKLS
Trigger: GGACAGTTTCAATCTGACCCATATGCCCTTTGCCCA...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTATCTGCTTCCTCTTGTaGAATGACGTTTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLICFLL*NDVWVI
Trigger: AATGACCCAAACGTCATTTCACAAGAGGAAGCAGAT...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCACCCTCCAGGGCATaGGGTTCAAATGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSPSRA*GSNATS
Trigger: GCTTGTAGCATTTGAACCTCATGCCCTGGAGGGTGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTGGAGTGGAGGCATCCTaGGAAGTGAATTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCGVEAS*EVNFPE
Trigger: TTCAGGAAAATTCACTTCTCAGGATGCCTCCACTCC...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTAAAGACTTTGATTCCTaGATAACCATAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLKDFDS*ITIGRL
Trigger: CAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTT...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTTGCCGCCTCAGCCTTaGCAGGAGAAAGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKLPPQP*QEKVYE
Trigger: TTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCGCTTCGCGTCAATCCTaGAGTGCTATCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLASRQS*SAIICF
Trigger: AAAACAGATGATAGCACTTCAGGATTGACGCGAAGC...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTAGCTCTCCAAATATTTaGAGATGCTTCGCGTCAATC +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLSSPNI*RCFASI
Trigger: GATTGACGCGAAGCATCTTCAAATATTTGGAGAGCT...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAGGACTGAGAAGCCAGTaGGGGGACAATTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEGLRSQ*GDNCSS
Trigger: GCTGCTGCAATTGTCCCCTCACTGGCTTCTCAGTCC...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTGTGTGCCAGGCGATaGGTAGGATATAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLCARR*VGYKGR
Trigger: TCTACCCTTATATCCTACTCATCGCCTGGCACACAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCAATTGTTTCATAGCTaGCCTGTCCACTATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGQLFHS*PVHYLK
Trigger: CTTCAGATAGTGGACAGGGCAGCTATGAAACAATTG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCTTCCACTTCATTTTCTaGACCTGTTGTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLFHFIF*TCCLLR
Trigger: TCTGAGCAGACAACAGGTGCAGAAAATGAAGTGGAA...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGGCATGAGGTTCAAATaGTACAAGCCCTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKGMRFK*YKPSNL
Trigger: CAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGCTGCTGGATTAGCATaGTTCCAGAAACGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSAAGLA*FQKRCF
Trigger: GAAGCAGCGTTTCTGGAAGCATGCTAATCCAGCAGC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCTGCTGGATTAGCATaGTTCCAGAAACGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSAAGLA*FQKRCF
Trigger: GAAGCAGCGTTTCTGGAAGCATGCTAATCCAGCAGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCTGGGTTTGGCTaGTGGATTAGCATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSPGFG*WISMLP
Trigger: TGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCATTGGATCACCCATaGTGCTCTCCTTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKPLDHP*CSPSPV
Trigger: AACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCTTCCTCAACCTCATTTaGCTTTTCAACTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLFLNLI*LFNFSD
Trigger: ATCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAA...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTCGACTGGCATTCTTCTaGAGTGCTTTGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCRLAFF*SALAVT
Trigger: AGTTACAGCCAAAGCACTGCAGAAGAATGCCAGTCG...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGACACTCTCTTCCAACTaGCCAAGTACAGGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQTLSSN*PSTGPD
Trigger: GTCAGGACCTGTACTTGGGCAGTTGGAAGAGAGTGT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCTTCCAGTTCTCTGTTaGTTTCAGGTTCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: SSLLKALSFGDLGLCSSALPVLC*FQVQVS
Trigger: TGATACTTGAACCTGAAACCAACAGAGAACTGGAAG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCAAGGCTGATAGGATaGAATCGTGGAGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKARLIG*NRGANQ
Trigger: CTGATTGGCTCCACGATTCCATCCTATCAGCCTTGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGCAAGGCTGATAGGATaGAATCGTGGAGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSARLIG*NRGANQ
Trigger: CTGATTGGCTCCACGATTCCATCCTATCAGCCTTGC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTTCTTGTCACTCTTCCTaGGTAGATGTTTTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLSCHSS*VDVFQP
Trigger: AGGCTGAAAAACATCTACCCAGGAAGAGTGACAAGA...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAGCTCCTTCCTCCACCTaGCTTCTGACTCATCAAGCT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQAPSST*LLTHQA
Trigger: AGCTTGATGAGTCAGAAGCCAGGTGGAGGAAGGAGC...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCACAGCTTTGGGCTaGTTTAGCAGTGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSTALG*FSSEPV
Trigger: GACAGGCTCACTGCTAAACCAGCCCAAAGCTGTGCT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCTGAAGCACAGCTTTaGGCTGGTTTAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSEAQL*AGLAVS
Trigger: GCTCACTGCTAAACCAGCCCAAAGCTGTGCTTCAGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCTGAAGCACAGCTTTaGGCTGGTTTAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSEAQL*AGLAVS
Trigger: GCTCACTGCTAAACCAGCCCAAAGCTGTGCTTCAGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAATTTCGAGGAGCACTaGGGTTATGGTCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTNFEEH*GYGQRE
Trigger: CTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGAGCCCTGGTCATCATaGTACGTATCTCATGGGTGT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQEPWSS*YVSHGC
Trigger: ACACCCATGAGATACGTACCATGATGACCAGGGCTC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAACCCCACAGACTGTGGTaGACAAACACTGGGTGTAAC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQPHRLW*TNTGCN
Trigger: GTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGG...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGTAATCCCTGCTATTTaGGAGGCCGAGGCAGAATTG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSVIPAI*EAEAEL
Trigger: CAATTCTGCCTCGGCCTCCCAAATAGCAGGGATTAC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCCCAGAGGGTTTCCCTaGGATGGAGATAACCTGAAA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSPRGFP*DGDNLK
Trigger: TTTCAGGTTATCTCCATCCCAGGGAAACCCTCTGGG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGTGAGCCACCGGACCTaGCTGAATTTTCTTATCCTC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSVSHRT*LNFLIL
Trigger: GAGGATAAGAAAATTCAGCCAGGTCCGGTGGCTCAC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACGCTGGCTCAGTGCTTTaGGCAAAGGGCATATGGGTC +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNAGSVL*AKGIWV
Trigger: GACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGC...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
3UTR CAA 72 bp TCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTaGCCTTGGGAACTGTTTAGAGAGTTCAAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SCSVLFCPARAT*PWELFREFKER
Trigger: TCTTTCTTTGAACTCTCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGACTTCCTTCCTCAAATaGATGGACCCCACTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQTSFLK*MDPTLQ
Trigger: TTGGAGAGTGGGGTCCATTCATTTGAGGAAGGAAGT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCACTTCCTTCCTCAAATaGATGGACCCCACTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSTSFLK*MDPTLQ
Trigger: TTGGAGAGTGGGGTCCATTCATTTGAGGAAGGAAGT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCTCGAATAAGGCGCTaGGTCTCACTATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSRIRR*VSLCSC
Trigger: ACAACTGCATAGTGAGACTCAGCGCCTTATTCGAGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCGAATAAGGCGCTaGGTCTCACTATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSRIRR*VSLCSC
Trigger: ACAACTGCATAGTGAGACTCAGCGCCTTATTCGAGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCTTATTCTCAGGCATATaGTATGGAAGGTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGLFSGI*YGRFSA
Trigger: TGCACTGAACCTTCCATATCATATGCCTGAGAATAA...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCTGCAAGACTCATCTaGTCCAGTAATGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSPARLI*SSNDLG
Trigger: ACCCAGATCATTACTGGATCAGATGAGTCTTGCAGG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTGCAAGACTCATCTaGTCCAGTAATGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKPARLI*SSNDLG
Trigger: ACCCAGATCATTACTGGATCAGATGAGTCTTGCAGG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGGAGTGGAGGCATCCTaGGAAGTGAATTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQGVEAS*EVNFPE
Trigger: TTCAGGAAAATTCACTTCTCAGGATGCCTCCACTCC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGGAGTGGAGGCATCCTaGGAAGTGAATTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSGVEAS*EVNFPE
Trigger: TTCAGGAAAATTCACTTCTCAGGATGCCTCCACTCC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGGAGTGGAGGCATCCTaGGAAGTGAATTTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKGVEAS*EVNFPE
Trigger: TTCAGGAAAATTCACTTCTCAGGATGCCTCCACTCC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAGCTGTTCTTCAGTCTaGTCATCATCAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTSCSSV*SSSESL
Trigger: CAGAGACTCTGATGATGATCAGACTGAAGAACAGCT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGSEQRL*FLNNHR
Trigger: CCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGA...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGAGCACTTCCTGGTCTaGTGGCTTCAAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKEHFLV*WLQKDF
Trigger: GAAATCCTTTTGAAGCCATCAGACCAGGAAGTGCTC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGAGCACTTCCTGGTCTaGTGGCTTCAAAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSEHFLV*WLQKDF
Trigger: GAAATCCTTTTGAAGCCATCAGACCAGGAAGTGCTC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATTGCCGCCTCAGCCTTaGCAGGAGAAAGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQLPPQP*QEKVYE
Trigger: TTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAGACAGGAGAATCACTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEDRRIT*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGTC...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGGTTAGACAGGCACTaGCCCAAGAATGAGCATTCA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKRLDRH*PKNEHS
Trigger: TGAATGCTCATTCTTGGGTCAGTGCCTGTCTAACCT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGCTATTCCAAAGGTTaGGGAAGGAGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSYSKG*GRRMLK
Trigger: CTTCAGCATCCTCCTTCCTCAACCTTTGGAATAGCT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTCATTAAAACATAACTaGTGCTGCTGGCTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLSLKHN*CCWLSA
Trigger: AGCACTGAGCCAGCAGCATCAGTTATGTTTTAATGA...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAGAAGAGCTGTCCTCCTaGTTTCCTTCTTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQEELSS*FPSSSS
Trigger: GGAGGAAGAAGAAGGAAATCAGGAGGACAGCTCTTC...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520551.1
CDS-3UTR GCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTTACCAAATCCTTCCTaGAAGACTCATCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLLPNPS*KTHLIQ
Trigger: CTGGATCAGATGAGTCTTGCAGGAAGGATTTGGTAA...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAAGTTGGATTCCTGTTaGAACACTGAGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKKLDSC*NTELSP
Trigger: TGGGGACAGCTCAGTGTTGCAACAGGAATCCAACTT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAAGTTGGATTCCTGTTaGAACACTGAGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQKLDSC*NTELSP
Trigger: TGGGGACAGCTCAGTGTTGCAACAGGAATCCAACTT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAGGCATGAGGTTCAAATaGTACAAGCCCTCCAACCTG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQGMRFK*YKPSNL
Trigger: CAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCC...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTGCTGATGATTTATTTTaGTGCTCAGGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLADDLF*CSGSST
Trigger: AGTGGAAGAGCCTGAGCAGCAAAATAAATCATCAGC...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCACATCTACTCCCAGTTaGTTAAGTCTATCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLTSTPS*LSLSRV
Trigger: TACTCTGGATAGACTTAAGCAACTGGGAGTAGATGT...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTGCTTCCAGAAACGCTaGTTCAAGGCTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSCFQKR*FKASSS
Trigger: AGAACTGGAAGCCTTGAAGCAGCGTTTCTGGAAGCA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCCCTTCGGAGTTTCATTaGTTCTTGCAGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLPSEFH*FLQFSF
Trigger: AAAGCTAAACTGCAAGAAGCAATGAAACTCCGAAGG...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCACTAAGAAGGAATTCTaGAGTCTCCTGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLTKKEF*SLLISF
Trigger: GAAGGAAATCAGGAGACTGCAGAATTCCTTCTTAGT...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGGAAGCCAACTGCCTTaGCAATTTCACTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSGSQLP*QFHYCH
Trigger: ATGGCAGTAGTGAAATTGGCAAGGCAGTTGGCTTCC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000373220.7
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAATCAGCTCAAAGCTaGTATTGTGGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKQSAQS*YCGCSP
Trigger: AGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCAATCAGCTCAAAGCTaGTATTGTGGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSQSAQS*YCGCSP
Trigger: AGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGGCCTGTTTGTCTGTTaGAAGGCTGATAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQGLFVC*KADRME
Trigger: TTCCATCCTATCAGCCTTGCAACAGACAAACAGGCC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGGCCTGTTTGTCTGTTaGAAGGCTGATAGGATGGAA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKGLFVC*KADRME
Trigger: TTCCATCCTATCAGCCTTGCAACAGACAAACAGGCC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCGACTGGCATTCTTCTaGAGTGCTTTGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSRLAFF*SALAVT
Trigger: AGTTACAGCCAAAGCACTGCAGAAGAATGCCAGTCG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCGACTGGCATTCTTCTaGAGTGCTTTGGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQRLAFF*SALAVT
Trigger: AGTTACAGCCAAAGCACTGCAGAAGAATGCCAGTCG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCAGCAAGGGCTACTTTaGCTTGGGAACTGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSQQGLL*LGNCLE
Trigger: CTCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTGCTCAGTTCTCTTTTaGCCAGCAAGGGCTACTTTG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSCSVLF*PARATL
Trigger: CAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCATGTATGTGCTTTTTaGAACTCTTTCTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGHVCAF*NSFCQW
Trigger: CCACTGACAGAAAGAGTTCCAAAAAGCACATACATG...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTACTTCAATAGTGCCATaGCATTTCCGTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSTSIVP*HFRGKW
Trigger: CCACTTGCCACGGAAATGCCATGGCACTATTGAAGT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTACTTCAATAGTGCCATaGCATTTCCGTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSTSIVP*HFRGKW
Trigger: CCACTTGCCACGGAAATGCCATGGCACTATTGAAGT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTGTTCCCGAGGAAGTTaGATTCCTGTTGCAACACTG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSCSRGS*IPVATL
Trigger: CAGTGTTGCAACAGGAATCCAACTTCCTCGGGAACA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTGTTCCCGAGGAAGTTaGATTCCTGTTGCAACACTG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSCSRGS*IPVATL
Trigger: CAGTGTTGCAACAGGAATCCAACTTCCTCGGGAACA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTCATCTGTTTCTTCTaGATTTTGGGGGCCTTCACC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLICFF*ILGAFT
Trigger: GGTGAAGGCCCCCAAAATCCAGAAGAAACAGATGAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCACCTGGTTTTGTGTaGCTTGCTCCATCCAACTTC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSPGFV*LAPSNF
Trigger: GAAGTTGGATGGAGCAAGCCACACAAAACCAGGTGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCTGAAGCTTTTCACCTaGTTTTGTGTGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQLKLFT*FCVACS
Trigger: GGAGCAAGCCACACAAAACCAGGTGAAAAGCTTCAG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTGAAGCTTTTCACCTaGTTTTGTGTGGCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLKLFT*FCVACS
Trigger: GGAGCAAGCCACACAAAACCAGGTGAAAAGCTTCAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAATTTAAACAGTGCTTaGCGCTTCTGGCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSNLNSA*RFWRSS
Trigger: TGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGATAGGATGGAATCGTaGAGCCAATCAGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSDRMES*SQSAQS
Trigger: GCTTTGAGCTGATTGGCTCCACGATTCCATCCTATC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAAGTGTCTTAGGCTCTaGGGAGGCGTTATACAGATC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSKCLRL*GGVIQI
Trigger: GATCTGTATAACGCCTCCCCAGAGCCTAAGACACTT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGATCCATACTGGCCAATaGCAATCGAGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQIHTGQ*QSRLQS
Trigger: GCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGAT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTATCCATACTGGCCAATaGCAATCGAGGCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSIHTGQ*QSRLQS
Trigger: GCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGAT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCATTCTCATCCATACTaGCCAATGGCAATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSHSHPY*PMAIEA
Trigger: AGCCTCGATTGCCATTGGCCAGTATGGATGAGAATG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCATTCTCATCCATACTaGCCAATGGCAATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKHSHPY*PMAIEA
Trigger: AGCCTCGATTGCCATTGGCCAGTATGGATGAGAATG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCCATGTTGGCATCCATaGCATTCTCATCCATACTGG +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQPCWHP*HSHPYW
Trigger: CCAGTATGGATGAGAATGCCATGGATGCCAACATGG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCCTCTTCCTTGTCTGTaGGAAAAGAGCCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQPLPCL*EKSLSK
Trigger: TTTGCTCAGGCTCTTTTCCCACAGACAAGGAAGAGG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCTCTTCCTTGTCTGTaGGAAAAGAGCCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSPLPCL*EKSLSK
Trigger: TTTGCTCAGGCTCTTTTCCCACAGACAAGGAAGAGG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCCTCTTCCTTGTCTGTaGGAAAAGAGCCTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSPLPCL*EKSLSK
Trigger: TTTGCTCAGGCTCTTTTCCCACAGACAAGGAAGAGG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCAAGGTACCTCTCTTaGTATAAACGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKARYLS*YKRSCR
Trigger: GCGACAGCTACGTTTATACCAAGAGAGGTACCTTGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGCAAGGTACCTCTCTTaGTATAAACGTAGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSARYLS*YKRSCR
Trigger: GCGACAGCTACGTTTATACCAAGAGAGGTACCTTGC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTGTTGAGCACTTCCTaGTCTGATGGCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLLSTS*SDGFKR
Trigger: CCTTTTGAAGCCATCAGACCAGGAAGTGCTCAACAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCTGTTGAGCACTTCCTaGTCTGATGGCTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSLLSTS*SDGFKR
Trigger: CCTTTTGAAGCCATCAGACCAGGAAGTGCTCAACAG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCTGAAGCACAGCTTTaGGCTGGTTTAGCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSEAQL*AGLAVS
Trigger: GCTCACTGCTAAACCAGCCCAAAGCTGTGCTTCAGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAATTTCGAGGAGCACTaGGGTTATGGTCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKNFEEH*GYGQRE
Trigger: CTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAATTTCGAGGAGCACTaGGGTTATGGTCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSNFEEH*GYGQRE
Trigger: CTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTGTCAGAGTCCTTCTCTaGGATCTTCTGAGACTTAGA +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCVRVLL*DLLRLR
Trigger: TCTAAGTCTCAGAAGATCCCAGAGAAGGACTCTGAC...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTATCTCCCACACTCATaGGCTCTCATCCCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSYLPHS*ALIPPN
Trigger: ATTTGGAGGGATGAGAGCCCATGAGTGTGGGAGATA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAACTTCCTTCCTCAAATaGATGGACCCCACTCTCCAA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQTSFLK*MDPTLQ
Trigger: TTGGAGAGTGGGGTCCATTCATTTGAGGAAGGAAGT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCTCGAATAAGGCGCTaGGTCTCACTATGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSRIRR*VSLCSC
Trigger: ACAACTGCATAGTGAGACTCAGCGCCTTATTCGAGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGATCTGGGTTTCCTTTaGAACTACAGGGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSDLGFL*NYRECI
Trigger: AATGCACTCCCTGTAGTTTCAAAGGAAACCCAGATC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGATCTGGGTTTCCTTTaGAACTACAGGGAGTGCATT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSDLGFL*NYRECI
Trigger: AATGCACTCCCTGTAGTTTCAAAGGAAACCCAGATC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAACCTGCAAGACTCATCTaGTCCAGTAATGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQPARLI*SSNDLG
Trigger: ACCCAGATCATTACTGGATCAGATGAGTCTTGCAGG...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCCAACAGTTGGCTCTaGGTGTCATCTTCTAAACAG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSNSWL*VSSSKQ
Trigger: CTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCCAACAGTTGGCTCTaGGTGTCATCTTCTAAACAG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSNSWL*VSSSKQ
Trigger: CTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAGCTGTTCTTCAGTCTaGTCATCATCAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSCSSV*SSSESL
Trigger: CAGAGACTCTGATGATGATCAGACTGAAGAACAGCT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGCCAGTATCATAAACTaGCTGTCCTCCCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSASIIN*LSSPIS
Trigger: AGAAATTGGGGAGGACAGTCAGTTTATGATACTGGC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCCAGTATCATAAACTaGCTGTCCTCCCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKASIIN*LSSPIS
Trigger: AGAAATTGGGGAGGACAGTCAGTTTATGATACTGGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTTGCCGCCTCAGCCTTaGCAGGAGAAAGTGTATGAA +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNLPPQP*QEKVYE
Trigger: TTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGTGAAGGAGAAGTCATaGAAGATGGACCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSVKEKS*KMDPFS
Trigger: AGAAAAGGGGTCCATCTTTCATGACTTCTCCTTCAC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGTGAAGGAGAAGTCATaGAAGATGGACCCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKVKEKS*KMDPFS
Trigger: AGAAAAGGGGTCCATCTTTCATGACTTCTCCTTCAC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCTTCGCGTCAATCCTaGAGTGCTATCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSASRQS*SAIICF
Trigger: AAAACAGATGATAGCACTTCAGGATTGACGCGAAGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGCTTCGCGTCAATCCTaGAGTGCTATCATCTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQASRQS*SAIICF
Trigger: AAAACAGATGATAGCACTTCAGGATTGACGCGAAGC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACGGTGGATGGATCATTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNGGWII*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAATGATCCATCCACC...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAACTGATGCTCAGTTCTaGGGGGAAAAACATTTGTCT +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTTDAQF*GEKHLS
Trigger: AGACAAATGTTTTTCCCCTCAGAACTGAGCATCAGT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCATATGGGTCAGATTaGAACTGTCCATGTCAATCC +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSAYGSD*NCPCQS
Trigger: GGATTGACATGGACAGTTTCAATCTGACCCATATGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGGATGCCACAAGAGTaGTTAGACATAACCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQRMPQE*LDITLG
Trigger: TCCTAGGGTTATGTCTAATCACTCTTGTGGCATCCT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTCTGCACCTGTTGTCTaGTCAGAACCTTTACTATGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSSAPVV*SEPLLW
Trigger: CCATAGTAAAGGTTCTGAGCAGACAACAGGTGCAGA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCTGCACCTGTTGTCTaGTCAGAACCTTTACTATGG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSAPVV*SEPLLW
Trigger: CCATAGTAAAGGTTCTGAGCAGACAACAGGTGCAGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTGCTGATGATTTATTTTaGTGCTCAGGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCADDLF*CSGSST
Trigger: AGTGGAAGAGCCTGAGCAGCAAAATAAATCATCAGC...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGGTTTTGTGTGGCTTaGTCCATCCAACTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQWFCVA*SIQLLR
Trigger: CCTAAGAAGTTGGATGGAGCAAGCCACACAAAACCA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTGGTTTTGTGTGGCTTaGTCCATCCAACTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSWFCVA*SIQLLR
Trigger: CCTAAGAAGTTGGATGGAGCAAGCCACACAAAACCA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR GCA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCACTAAGAAGGAATTCTaGAGTCTCCTGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLTKKEF*SLLISF
Trigger: GAAGGAAATCAGGAGACTGCAGAATTCCTTCTTAGT...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGAGGAAGCCAACTaGCTTGCCAATTTCACTACT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSREEAN*LANFTT
Trigger: AGTAGTGAAATTGGCAAGGCAGTTGGCTTCCTCTCT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000373220.7
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCCAGTTTGCTAGGCTaGTTGCCTGAGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSSLLG*LPEFSS
Trigger: AGATGAAAACTCAGGCAAGCAGCCTAGCAAACTGGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCCAGTTTGCTAGGCTaGTTGCCTGAGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSSLLG*LPEFSS
Trigger: AGATGAAAACTCAGGCAAGCAGCCTAGCAAACTGGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSCYCG*SPLLAM
Trigger: CATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSCYCG*SPLLAM
Trigger: CATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTGGATCACCCATGCTaGTCTCCTTCTCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLDHPC*SPSPVY
Trigger: ATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTTGGATCACCCATGCTaGTCTCCTTCTCCTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSLDHPC*SPSPVY
Trigger: ATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACATCATCTGTTTTGAGGTaGTTAGGTGAAGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTSSVLR*LGEGEV
Trigger: GACTTCTCCTTCACCTAAGCACCTCAAAACAGATGA...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCTTTCTCCAAAGAGTaGTTTCTCCCAGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSFSKE*FLPGAS
Trigger: TGAGGCTCCTGGGAGAAAGCACTCTTTGGAGAAAGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTACCCTAGTATGGCTGTaGAACTGTGAATTAATGAGA +
Preference number: 4 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLTLVWL*NCELMR
Trigger: TCTCATTAATTCACAGTTGCACAGCCATACTAGGGT...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAACATTCCAAGCTGTGTaGCAGGCGATGAGTAGGATA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQTFQAV*QAMSRI
Trigger: TATCCTACTCATCGCCTGGCACACAGCTTGGAATGT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCCTTCCTCAAATGAATaGACCCCACTCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSPSSNE*TPLSKD
Trigger: ATCTTTGGAGAGTGGGGTCCATTCATTTGAGGAAGG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTTCCTCAAATGAATaGACCCCACTCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKPSSNE*TPLSKD
Trigger: ATCTTTGGAGAGTGGGGTCCATTCATTTGAGGAAGG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCCTTCCTCAAATGAATaGACCCCACTCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSPSSNE*TPLSKD
Trigger: ATCTTTGGAGAGTGGGGTCCATTCATTTGAGGAAGG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCAGGCATATGATATaGAAGGTTCAGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLRHMI*KVQCRL
Trigger: GAGTCTGCACTGAACCTTCCATATCATATGCCTGAG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTCAGGCATATGATATaGAAGGTTCAGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLRHMI*KVQCRL
Trigger: GAGTCTGCACTGAACCTTCCATATCATATGCCTGAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCAGGCATATGATATaGAAGGTTCAGTGCAGACTC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKLRHMI*KVQCRL
Trigger: GAGTCTGCACTGAACCTTCCATATCATATGCCTGAG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAACTTCAATAGTGCCATaGCATTTCCGTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQTSIVP*HFRGKW
Trigger: CCACTTGCCACGGAAATGCCATGGCACTATTGAAGT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAATTTAAACAGTGCTTaGCGCTTCTGGCGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQNLNSA*RFWRSS
Trigger: TGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGCGTTATACAGATCCTaGGAATCCTCTATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSALYRS*ESSMGS
Trigger: ACTTCCCATAGAGGATTCCCAGGATCTGTATAACGC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGCGTTATACAGATCCTaGGAATCCTCTATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKALYRS*ESSMGS
Trigger: ACTTCCCATAGAGGATTCCCAGGATCTGTATAACGC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAAGTGTCTTAGGCTCTaGGGAGGCGTTATACAGATC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQKCLRL*GGVIQI
Trigger: GATCTGTATAACGCCTCCCCAGAGCCTAAGACACTT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCTTCTAAACAGAACTaGAAGTCTCCTGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSSKQN*KSPAPR
Trigger: CCTAGGAGCAGGAGACTTCCAGTTCTGTTTAGAAGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCTAAACAGAACTaGAAGTCTCCTGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSSKQN*KSPAPR
Trigger: CCTAGGAGCAGGAGACTTCCAGTTCTGTTTAGAAGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGACAGCTCATCCATGTTaGCATCCATGGCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKTAHPC*HPWHSH
Trigger: ATGAGAATGCCATGGATGCCAACATGGATGAGCTGT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTACAGCTCATCCATGTTaGCATCCATGGCATTCTCAT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSTAHPC*HPWHSH
Trigger: ATGAGAATGCCATGGATGCCAACATGGATGAGCTGT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTTCTTGTCACTCTTCCTaGGTAGATGTTTTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCSCHSS*VDVFQP
Trigger: AGGCTGAAAAACATCTACCCAGGAAGAGTGACAAGA...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCATCAGAGTCTCTGTaGAACAAGTCCATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSSESL*NKSIWE
Trigger: TTCCCAGATGGACTTGTTCCACAGAGACTCTGATGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCATCAGAGTCTCTGTaGAACAAGTCCATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSSESL*NKSIWE
Trigger: TTCCCAGATGGACTTGTTCCACAGAGACTCTGATGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGGGCTACTTTGCCTTaGGAACTGTTTAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQRATLP*ELFREF
Trigger: GAACTCTCTAAACAGTTCCCAAGGCAAAGTAGCCCT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGAAAGTAACCCATCTTaGAAGAGCTGTCCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQESNPS*KSCPPD
Trigger: ATCAGGAGGACAGCTCTTCCAAGATGGGTTACTTTC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCATCTGCTTCCTCTTGTaGAATGACGTTTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSICFLL*NDVWVI
Trigger: AATGACCCAAACGTCATTTCACAAGAGGAAGCAGAT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGCCGGGGTTTACGTTTaGAGAAATCATGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSAGVYV*RNHEWF
Trigger: AAACCATTCATGATTTCTTCAAACGTAAACCCCGGC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCCGGGGTTTACGTTTaGAGAAATCATGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSAGVYV*RNHEWF
Trigger: AAACCATTCATGATTTCTTCAAACGTAAACCCCGGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTGTTCTTCAGTCTaGTCATCATCAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSCSSV*SSSESL
Trigger: CAGAGACTCTGATGATGATCAGACTGAAGAACAGCT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAAAGACTTTGATTCCTaGATAACCATAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSKDFDS*ITIGRL
Trigger: CAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAAAGACTTTGATTCCTaGATAACCATAGGGCGACTG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSKDFDS*ITIGRL
Trigger: CAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAAAGACAAAGTTTCTTaGATTTCGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSKDKVS*ISRSTG
Trigger: CCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAAAGACAAAGTTTCTTaGATTTCGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKKDKVS*ISRSTG
Trigger: CCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCCCCTTTTCTTTACCTaGGACTTAGACGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSPLFFT*DLDDSF
Trigger: AAAGGAATCGTCTAAGTCTCAGGTAAAGAAAAGGGG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCCCCTTTTCTTTACCTaGGACTTAGACGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSPLFFT*DLDDSF
Trigger: AAAGGAATCGTCTAAGTCTCAGGTAAAGAAAAGGGG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCCTTTTCTTTACCTaGGACTTAGACGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKPLFFT*DLDDSF
Trigger: AAAGGAATCGTCTAAGTCTCAGGTAAAGAAAAGGGG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTGAGGTGCTTAGGTaGAGGAGAAGTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQFEVLR*RRSHER
Trigger: TCTTTCATGACTTCTCCTTCACCTAAGCACCTCAAA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTTTGAGGTGCTTAGGTaGAGGAGAAGTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSFEVLR*RRSHER
Trigger: TCTTTCATGACTTCTCCTTCACCTAAGCACCTCAAA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTTGAGGTGCTTAGGTaGAGGAGAAGTCATGAAAGA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSFEVLR*RRSHER
Trigger: TCTTTCATGACTTCTCCTTCACCTAAGCACCTCAAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAGCTCTCCAAATATTTaGAGATGCTTCGCGTCAATC +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSSSPNI*RCFASI
Trigger: GATTGACGCGAAGCATCTTCAAATATTTGGAGAGCT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGCTCTCCAAATATTTaGAGATGCTTCGCGTCAATC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSSPNI*RCFASI
Trigger: GATTGACGCGAAGCATCTTCAAATATTTGGAGAGCT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACGAGGCAGAGTCTTTCTaGCTTGGGTACCAGTTTAAG +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNEAESF*LGYQFK
Trigger: CTTAAACTGGTACCCAAGTCAGAAAGACTCTGCCTC...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAATATGGAAGGTTCAGTaGAGACTCTCGAATAAGGCG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQIWKVQ*RLSNKA
Trigger: CGCCTTATTCGAGAGTCTGCACTGAACCTTCCATAT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCTGCACCTGTTGTCTaGTCAGAACCTTTACTATGG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSAPVV*SEPLLW
Trigger: CCATAGTAAAGGTTCTGAGCAGACAACAGGTGCAGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTTCCACTTCATTTTCTaGACCTGTTGTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSFHFIF*TCCLLR
Trigger: TCTGAGCAGACAACAGGTGCAGAAAATGAAGTGGAA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTCCACTTCATTTTCTaGACCTGTTGTCTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQFHFIF*TCCLLR
Trigger: TCTGAGCAGACAACAGGTGCAGAAAATGAAGTGGAA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTACCAAATCCTTCCTaGAAGACTCATCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLPNPS*KTHLIQ
Trigger: CTGGATCAGATGAGTCTTGCAGGAAGGATTTGGTAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGCTGATGATTTATTTTaGTGCTCAGGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSADDLF*CSGSST
Trigger: AGTGGAAGAGCCTGAGCAGCAAAATAAATCATCAGC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGCTGATGATTTATTTTaGTGCTCAGGCTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQADDLF*CSGSST
Trigger: AGTGGAAGAGCCTGAGCAGCAAAATAAATCATCAGC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAACATCTACTCCCAGTTaGTTAAGTCTATCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTTSTPS*LSLSRV
Trigger: TACTCTGGATAGACTTAAGCAACTGGGAGTAGATGT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGAGGAAGCCAACTaGCTTGCCAATTTCACTACT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQREEAN*LANFTT
Trigger: AGTAGTGAAATTGGCAAGGCAGTTGGCTTCCTCTCT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000373220.7
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCCAGTTTGCTAGGCTaGTTGCCTGAGTTTTCATCT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSSLLG*LPEFSS
Trigger: AGATGAAAACTCAGGCAAGCAGCCTAGCAAACTGGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATTCATGGTCTTCCAGTaGCAGATCATTACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQFMVFQ*QIITRV
Trigger: GACTCTGGTAATGATCTGGCACTGGAAGACCATGAA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGGCATTCTTCTGCAGTaGTTTGGCTGTAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKGILLQ*FGCNFL
Trigger: AAGAAAGTTACAGCCAAAGCACTGCAGAAGAATGCC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGGCATTCTTCTGCAGTaGTTTGGCTGTAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSGILLQ*FGCNFL
Trigger: AAGAAAGTTACAGCCAAAGCACTGCAGAAGAATGCC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGGCATTCTTCTGCAGTaGTTTGGCTGTAACTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQGILLQ*FGCNFL
Trigger: AAGAAAGTTACAGCCAAAGCACTGCAGAAGAATGCC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCATCTGTTTTGAGGTaGTTAGGTGAAGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSSVLR*LGEGEV
Trigger: GACTTCTCCTTCACCTAAGCACCTCAAAACAGATGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCATCTGTTTTGAGGTaGTTAGGTGAAGGAGAAGTC +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSSVLR*LGEGEV
Trigger: GACTTCTCCTTCACCTAAGCACCTCAAAACAGATGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAGATGTCCAGAGCTGTaGAGTAGAAATCACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSRCPEL*SRNHWN
Trigger: ATTCCAGTGATTTCTACTGCACAGCTCTGGACATCT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAATGCTGCTGGCTCAGTaGTTTGGGCAAAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEMLLAQ*FGQRAY
Trigger: ATATGCCCTTTGCCCAAAGCACTGAGCCAGCAGCAT...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTGTTCCCGAGGAAGTTaGATTCCTGTTGCAACACTG +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNCSRGS*IPVATL
Trigger: CAGTGTTGCAACAGGAATCCAACTTCCTCGGGAACA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTCACCTGGTTTTGTGTaGCTTGCTCCATCCAACTTC +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNSPGFV*LAPSNF
Trigger: GAAGTTGGATGGAGCAAGCCACACAAAACCAGGTGA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACGATAGGATGGAATCGTaGAGCCAATCAGCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNDRMES*SQSAQS
Trigger: GCTTTGAGCTGATTGGCTCCACGATTCCATCCTATC...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAGCAAGGCTGATAGGATaGAATCGTGGAGCCAATCAG +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEARLIG*NRGANQ
Trigger: CTGATTGGCTCCACGATTCCATCCTATCAGCCTTGC...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCTTCTAAACAGAACTaGAAGTCTCCTGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSSKQN*KSPAPR
Trigger: CCTAGGAGCAGGAGACTTCCAGTTCTGTTTAGAAGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACCCATGTTGGCATCCATaGCATTCTCATCCATACTGG +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNPCWHP*HSHPYW
Trigger: CCAGTATGGATGAGAATGCCATGGATGCCAACATGG...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCTTGTCACTCTTCCTaGGTAGATGTTTTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSCHSS*VDVFQP
Trigger: AGGCTGAAAAACATCTACCCAGGAAGAGTGACAAGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCTTGTCACTCTTCCTaGGTAGATGTTTTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSCHSS*VDVFQP
Trigger: AGGCTGAAAAACATCTACCCAGGAAGAGTGACAAGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCATCATCATCTTCATaGTCTTCCAGTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSSSSS*SSSARS
Trigger: TGATCTGGCACTGGAAGACCATGAAGATGATGATGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCATCATCATCTTCATaGTCTTCCAGTGCCAGATCA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSSSSS*SSSARS
Trigger: TGATCTGGCACTGGAAGACCATGAAGATGATGATGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGGAAGGATCATTGGCTaGAGTGTCAATTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSGRIIG*SVNSNF
Trigger: AAAGTTGGAATTGACACTCCAGCCAATGATCCTTCC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAGAAGGAAGGATCATTaGCTGGAGTGTCAATTCCAA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSRRKDH*LECQFQ
Trigger: TTGGAATTGACACTCCAGCCAATGATCCTTCCTTCT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAATACAAAAATTAGCTaGGCGTATTGGCACATGCCT +
Preference number: 4 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTNTKIS*AYWHMP
Trigger: AGGCATGTGCCAATACGCCCAGCTAATTTTTGTATT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTCTTTCACCGAGCCCTaGTCATCATGGTACGTATCT +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNSFTEP*SSWYVS
Trigger: AGATACGTACCATGATGACCAGGGCTCGGTGAAAGA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAATGAGCATTCAAGCTaGACAGCAAATCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSNEHSS*TANLPF
Trigger: GAAGGGAAGATTTGCTGTCCAGCTTGAATGCTCATT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAACATATGCCTGTAATGTaGCCCAGCTATTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQHMPVM*PSYSKG
Trigger: ACCTTTGGAATAGCTGGGCCACATTACAGGCATATG...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCATAGTGGCAGGTCCTaGGGCTTCAATTTCATTAAA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQHSGRS*GFNFIK
Trigger: TTTAATGAAATTGAAGCCCCAGGACCTGCCACTATG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAATCTGCTTCCTCTTGTaGAATGACGTTTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQICFLL*NDVWVI
Trigger: AATGACCCAAACGTCATTTCACAAGAGGAAGCAGAT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAAATATCTCTTCATCTaGATCTCCTTCACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKKYLFI*ISFTQG
Trigger: CCCTTGAGTGAAGGAGATTCAGATGAAGAGATATTT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAAATATCTCTTCATCTaGATCTCCTTCACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSKYLFI*ISFTQG
Trigger: CCCTTGAGTGAAGGAGATTCAGATGAAGAGATATTT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTTATTCTCAGGCATATaGTATGGAAGGTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKLFSGI*YGRFSA
Trigger: TGCACTGAACCTTCCATATCATATGCCTGAGAATAA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTATTCTCAGGCATATaGTATGGAAGGTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLFSGI*YGRFSA
Trigger: TGCACTGAACCTTCCATATCATATGCCTGAGAATAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAGCCGGGGTTTACGTTTaGAGAAATCATGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQAGVYV*RNHEWF
Trigger: AAACCATTCATGATTTCTTCAAACGTAAACCCCGGC...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTGAACCTTTACTATGGTaGTCACTGTTCATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCEPLLW*SLFISV
Trigger: TACTGAAATGAACAGTGATCACCATAGTAAAGGTTC...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTTTAGCTTTTAACACCTaGAGCTTTTCACCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCLAFNT*SFSPGF
Trigger: AAAACCAGGTGAAAAGCTTCAGGTGTTAAAAGCTAA...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTTCAGCCTGAGATGTaGACTTTCCAGTACACAAAT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSFQPEM*TFQYTN
Trigger: ATTTGTGTACTGGAAAGTTCACATCTCAGGCTGAAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTTTCAGCCTGAGATGTaGACTTTCCAGTACACAAAT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSFQPEM*TFQYTN
Trigger: ATTTGTGTACTGGAAAGTTCACATCTCAGGCTGAAA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGG +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSEQRL*FLNNHR
Trigger: CCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSEQRL*FLNNHR
Trigger: CCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSSEQRL*FLNNHR
Trigger: CCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAAAGACAAAGTTTCTTaGATTTCGAGGAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQKDKVS*ISRSTG
Trigger: CCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCAGAAGGGAGATCTTTaGACAACAGTGCTTCAAATT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSQKGDL*TTVLQI
Trigger: AATTTGAAGCACTGTTGTTCAAAGATCTCCCTTCTG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTTAGCTTTTAACACCTaGAGCTTTTCACCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSLAFNT*SFSPLL
Trigger: CAACAGAGGTGAAAAGCTTCAGGTGTTAAAAGCTAA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373220.7
CDS-3UTR GCA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTACTTTCATCACTGTCTaGCACAGTTTTGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCTFITV*HSFVNP
Trigger: AGGATTTACAAAACTGTGGCAGACAGTGATGAAAGT...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATTACCAAATCCTTCCTaGAAGACTCATCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQLPNPS*KTHLIQ
Trigger: CTGGATCAGATGAGTCTTGCAGGAAGGATTTGGTAA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCACATCTACTCCCAGTTaGTTAAGTCTATCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSTSTPS*LSLSRV
Trigger: TACTCTGGATAGACTTAAGCAACTGGGAGTAGATGT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTACATCTACTCCCAGTTaGTTAAGTCTATCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSTSTPS*LSLSRV
Trigger: TACTCTGGATAGACTTAAGCAACTGGGAGTAGATGT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCCTTCGGAGTTTCATTaGTTCTTGCAGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSPSEFH*FLQFSF
Trigger: AAAGCTAAACTGCAAGAAGCAATGAAACTCCGAAGG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCCTTCGGAGTTTCATTaGTTCTTGCAGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSPSEFH*FLQFSF
Trigger: AAAGCTAAACTGCAAGAAGCAATGAAACTCCGAAGG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAGGAAGCCAACTGCCTTaGCAATTTCACTACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEGSQLP*QFHYCH
Trigger: ATGGCAGTAGTGAAATTGGCAAGGCAGTTGGCTTCC...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATG +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNSCYCG*SPLLAM
Trigger: CATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAACCTGAAAATGAAATaGTCCTCAAGGTTAGACAGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSNLKMK*SSRLDR
Trigger: CCTGTCTAACCTTGAGGAGCATTTCATTTTCAGGTT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCATGTATGTGCTTTTTaGAACTCTTTCTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSHVCAF*NSFCQW
Trigger: CCACTGACAGAAAGAGTTCCAAAAAGCACATACATG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCATGTATGTGCTTTTTaGAACTCTTTCTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSHVCAF*NSFCQW
Trigger: CCACTGACAGAAAGAGTTCCAAAAAGCACATACATG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCCAGTTCTCTGTTaGTTTCAGGTTCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLPVLC*FQVQVS
Trigger: TGATACTTGAACCTGAAACCAACAGAGAACTGGAAG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCCTTCCAGTTCTCTGTTaGTTTCAGGTTCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLPVLC*FQVQVS
Trigger: TGATACTTGAACCTGAAACCAACAGAGAACTGGAAG...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAACATTCTCATCCATACTaGCCAATGGCAATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEHSHPY*PMAIEA
Trigger: AGCCTCGATTGCCATTGGCCAGTATGGATGAGAATG...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGGAACAAGTCCATCTaGGAAGCATCATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQWNKSI*EASSMF
Trigger: AAACATAGATGATGCTTCCCAGATGGACTTGTTCCA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTGGAACAAGTCCATCTaGGAAGCATCATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSWNKSI*EASSMF
Trigger: AAACATAGATGATGCTTCCCAGATGGACTTGTTCCA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGCTTTTCACCTCTGTTaGTTTCAGGTTCAAGTATCA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQAFHLC*FQVQVS
Trigger: TGATACTTGAACCTGAAACCAACAGAGGTGAAAAGC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373220.7
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATTATTCTCAGGCATATaGTATGGAAGGTTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQLFSGI*YGRFSA
Trigger: TGCACTGAACCTTCCATATCATATGCCTGAGAATAA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGAACCTTTACTATGGTaGTCACTGTTCATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKEPLLW*SLFISV
Trigger: TACTGAAATGAACAGTGATCACCATAGTAAAGGTTC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGAACCTTTACTATGGTaGTCACTGTTCATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQEPLLW*SLFISV
Trigger: TACTGAAATGAACAGTGATCACCATAGTAAAGGTTC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTAGCTTTTAACACCTaGAGCTTTTCACCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLAFNT*SFSPGF
Trigger: AAAACCAGGTGAAAAGCTTCAGGTGTTAAAAGCTAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR TCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAGCCAGTATCATAAACTaGCTGTCCTCCCCAATTTCT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEASIIN*LSSPIS
Trigger: AGAAATTGGGGAGGACAGTCAGTTTATGATACTGGC...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAAAGCAGTTGAGAAAATaGGGGATGCCACAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEKQLRK*GMPQRS
Trigger: AGATCTCTGTGGCATCCCTCATTTTCTCAACTGCTT...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAAAGTCTCCCAGCCTaGGCATTAGAAACTCTCAAA +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNKSLPA*ALETLK
Trigger: TTTGAGAGTTTCTAATGCTCAGGCTGGGAGACTTTT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGACTTTCATCACTGTCTaGCACAGTTTTGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKTFITV*HSFVNP
Trigger: AGGATTTACAAAACTGTGGCAGACAGTGATGAAAGT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTACTTTCATCACTGTCTaGCACAGTTTTGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSTFITV*HSFVNP
Trigger: AGGATTTACAAAACTGTGGCAGACAGTGATGAAAGT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAACCTTCGGAGTTTCATTaGTTCTTGCAGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQPSEFH*FLQFSF
Trigger: AAAGCTAAACTGCAAGAAGCAATGAAACTCCGAAGG...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAACTAAGAAGGAATTCTaGAGTCTCCTGATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQTKKEF*SLLISF
Trigger: GAAGGAAATCAGGAGACTGCAGAATTCCTTCTTAGT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000373220.7
CDS-3UTR GCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAATTCATGGTCTTCCAGTaGCAGATCATTACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEFMVFQ*QIITRV
Trigger: GACTCTGGTAATGATCTGGCACTGGAAGACCATGAA...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTCCTCAACCTCATTTaGCTTTTCAACTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: HWLECQFQLSVLETSQSSFLNLI*LFNFSD
Trigger: ATCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTTCCTCAACCTCATTTaGCTTTTCAACTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKFLNLI*LFNFSD
Trigger: ATCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR GCA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTTCCTCAACCTCATTTaGCTTTTCAACTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: DHWLECQFQLSVLETSQSFLNLI*LFNFSD
Trigger: ATCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATGGAACAAGTCCATCTaGGAAGCATCATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQWNKSI*EASSMF
Trigger: AAACATAGATGATGCTTCCCAGATGGACTTGTTCCA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR TCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAATATCTCTTCATCTaGATCTCCTTCACTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNKYLFI*ISFTQG
Trigger: CCCTTGAGTGAAGGAGATTCAGATGAAGAGATATTT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAGAACCTTTACTATGGTaGTCACTGTTCATTTCAGTA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQEPLLW*SLFISV
Trigger: TACTGAAATGAACAGTGATCACCATAGTAAAGGTTC...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CCA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAATCAAATAGTATCATaGGAACACTCCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KDHWLECQFQLSVLETSQNQIVS*EHSSQK
Trigger: TTTCTGGGAGGAGTGTTCCCATGATACTATTTGATT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR TCA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTTAGCTTTTAACACCTaGAGCTTTTCACCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNLAFNT*SFSPGF
Trigger: AAAACCAGGTGAAAAGCTTCAGGTGTTAAAAGCTAA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAACATGTATGTGCTTTTTaGAACTCTTTCTGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEHVCAF*NSFCQW
Trigger: CCACTGACAGAAAGAGTTCCAAAAAGCACATACATG...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR GCA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAAACTTTCATCACTGTCTaGCACAGTTTTGTAAATCCT +
Preference number: 4 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKETFITV*HSFVNP
Trigger: AGGATTTACAAAACTGTGGCAGACAGTGATGAAAGT...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS GCA 90 bp GTGAACCTCAGAACCCACCTCGCCTGTCATGACTTCTGCCTCCCCTaGGCTCCACTAGGGACGGAGCTGTCTCTGATTCCCTCAGCCGGA +
Preference number: 5 (lower is better)
Translates to: VNLRTHLACHDFCLP*APLGTELSLIPSAG
Trigger: TCCGGCTGAGGGAATCAGAGACAGCTCCGTCCCTAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGGGTTCTGAGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251195.9
ENST00000318121.8
CDS-3UTR CAA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCTTCTCCGCCTCTCTTaGGACTCTGTCTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSLLKALSFGDLGLCSSALLRLS*DSVSPS
Trigger: GCTGGGAGAGACAGAGTCCAAAGAGAGGCGGAGAAG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTGAGGCCGAGGCAGAATaGCTTGAACCTAGGAGGCGG +
Preference number: 5 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLEAEAE*LEPRRR
Trigger: CCGCCTCCTAGGTTCAAGCAATTCTGCCTCGGCCTC...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS GCA 90 bp TTCTGGATTTTGGGGGCCTTCACCCTCCAGGGCATGAGGTTCAAATaGTACAAGCCCTCCAACCTGACATTCCTCACTGTGATTGTTCCC +
Preference number: 5 (lower is better)
Translates to: FWILGAFTLQGMRFK*YKPSNLTFLTVIVP
Trigger: GGGAACAATCACAGTGAGGAATGTCAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCCCTGGAGGGTGAAGGCCCCCAAAATCCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 90 bp CACTATGACGTTCACATTCACTGTCTGACCAGCCCTGGGTTTGGCTaGTGGATTAGCATGCTTCCAGAAACGCTGCTTCAAGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HYDVHIHCLTSPGFG*WISMLPETLLQGFQ
Trigger: CTGGAAGCCTTGAAGCAGCGTTTCTGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAACGTCATAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000520551.1
CDS CCA 90 bp TCCCACGGCCTGTTTGTCTGTTGCAAGGCTGATAGGATGGAATCGTaGAGCCAATCAGCTCAAAGCTGCTATTGTGGCTGCTCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SHGLFVCCKADRMES*SQSAQSCYCGCSPL
Trigger: CAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCTATCAGCCTTGCAACAGACAAACAGGCCGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS CCA 90 bp TGGGGTTATGGTCAGAGAGAGCAGCCAGTTTCTGAAGCACAGCTTTaGGCTGGTTTAGCAGTGAGCCTGTCTTCACCTGTTGAGCACTTC +
Preference number: 5 (lower is better)
Translates to: WGYGQREQPVSEAQL*AGLAVSLSSPVEHF
Trigger: GAAGTGCTCAACAGGTGAAGACAGGCTCACTGCTAAACCAGCCCAAAGCTGTGCTTCAGAAACTGGCTGCTCTCTCTGACCATAACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS-3UTR CAA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATCATCCTCATCCAGTTaGCTAGGCTGCTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLSSSSS*LGCLPE
Trigger: CTCAGGCAAGCAGCCTAGCAAACTGGATGAGGATGA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTTCATCCTCATCCAGTTaGCTAGGCTGCTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCSSSSS*LGCLPE
Trigger: CTCAGGCAAGCAGCCTAGCAAACTGGATGAGGATGA...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTCCGAGGCAGAATTGCTaGAACCTAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLPRQNC*NLGGGG
Trigger: ACCTCCGCCTCCTAGGTTCAAGCAATTCTGCCTCGG...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS CCA 90 bp AAAACTGGTCCCACGGCCTGTTTGTCTGTTGCAAGGCTGATAGGATaGAATCGTGGAGCCAATCAGCTCAAAGCTGCTATTGTGGCTGCT +
Preference number: 5 (lower is better)
Translates to: KTGPTACLSVARLIG*NRGANQLKAAIVAA
Trigger: AGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCTATCAGCCTTGCAACAGACAAACAGGCCGTGGGACCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS-3UTR CAA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTGTTTCTTCTGGATTTaGGGGGCCTTCACCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SSLLKALSFGDLGLCSSACFFWI*GAFTLQ
Trigger: CTGGAGGGTGAAGGCCCCCAAAATCCAGAAGAAACA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGCTTTTCACCTGGTTTaGTGTGGCTTGCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLAFHLV*CGLLHP
Trigger: TGGATGGAGCAAGCCACACAAAACCAGGTGAAAAGC...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAACAGCTCATCCATGTaGGCATCCATGGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGNSSSM*ASMAFS
Trigger: TGAGAATGCCATGGATGCCAACATGGATGAGCTGTT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CACCATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTACAAGTGCTTCTTCCATaGGATCACCCATGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HHAWPKSSLLKALSFGDLQVLLP*DHPCCS
Trigger: AGAGCAGCATGGGTGATCCAATGGAAGAAGCACTTG...TAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATCGTCTTCCTCTTCCTaGTCTGTGGGAAAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLSSSSS*SVGKEP
Trigger: AGGCTCTTTTCCCACAGACAAGGAAGAGGAAGACGA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS TCA 90 bp CCATCAGTGCCCATGTCTTTCACTATGACGTTCACATTCACTGTCTaGCCAGCCCTGGGTTTGGCTGCTGGATTAGCATGCTTCCAGAAA +
Preference number: 5 (lower is better)
Translates to: PSVPMSFTMTFTFTV*PALGLAAGLACFQK
Trigger: TTTCTGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAACGTCATAGTGAAAGACATGGGCACTGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000520551.1
CDS TCA 90 bp CTGCTTTTAGCTCTTCCTTTCCATCAGTGCCCATGTCTTTCACTATaGCGTTCACATTCACTGTCTGACCAGCCCTGGGTTTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLLALPFHQCPCLSL*RSHSLSDQPWVWLL
Trigger: CAGCAGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAACGTCATAGTGAAAGACATGGGCACTGATGGAAAGGAAGAGCTAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CAA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCCACTCAAGGGTCCAATaGTTTCATAGCTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSLLKALSFGDLGLCSSAHSRVQ*FHSCPV
Trigger: GACAGGGCAGCTATGAAACAATTGGACCCTTGAGTG...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTTCTCTGGAGAGGCATTaGTGTCCTCTGTTTCGGAAT +
Preference number: 5 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCSLERH*CPLFRN
Trigger: ATTCCGAAACAGAGGACACAAATGCCTCTCCAGAGA...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGGCTTCCAGTTCTCTGTaGGTTTCAGGTTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGASSSL*VSGSSI
Trigger: GATACTTGAACCTGAAACCAACAGAGAACTGGAAGC...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTAACAGCTCATCCATGTaGGCATCCATGGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCNSSSM*ASMAFS
Trigger: TGAGAATGCCATGGATGCCAACATGGATGAGCTGTT...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp GCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATTCTTCTGCAGTGCTTaGGCTGTAACTTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: AWPKSSLLKALSFGDLGLFFCSA*AVTFLA
Trigger: GGCCAAGAAAGTTACAGCCAAAGCACTGCAGAAGAA...TAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTAAGGAGGAGAATCGCTaGAACCTGGGAGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLKEENR*NLGGRD
Trigger: ATCTCTGCCTCCCAGGTTCAAGCGATTCTCCTCCTT...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCTGCTGGCTCAGTGCTTaGGGCAAAGGGCATATGGGT +
Preference number: 5 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLCWLSA*GKGHMG
Trigger: ACCCATATGCCCTTTGCCCAAAGCACTGAGCCAGCA...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS TCA 90 bp CGCCTCAGCCTTGACAGGAGAAAGTGTATGAAAGACAAAGTTTCTTaGATTTCGAGGAGCACTGGGGTTATGGTCAGAGAGAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RLSLDRRKCMKDKVS*ISRSTGVMVRESSQ
Trigger: CTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTCATACACTTTCTCCTGTCAAGGCTGAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS GCA 90 bp AGCCTGAGCAAAGAGCAAGTGCTTCTTCCATTGGATCACCCATGCTaGTCTCCTTCTCCTGTTTATTTAACTCTGATGAGGCTGGAGTGG +
Preference number: 5 (lower is better)
Translates to: SLSKEQVLLPLDHPC*SPSPVYLTLMRLEW
Trigger: CCACTCCAGCCTCATCAGAGTTAAATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGGAAGAAGCACTTGCTCTTTGCTCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 90 bp ATGTTTTTCCATCGAAACTTCCTCATTCGCCCAGGACCATCGCTGTaGAGATCCCCATCAGCAAGGTACCTCTCTTGGTATAAACGTAGC +
Preference number: 5 (lower is better)
Translates to: MFFHRNFLIRPGPSL*RSPSARYLSWYKRS
Trigger: GCTACGTTTATACCAAGAGAGGTACCTTGCTGATGGGGATCTGCACAGCGATGGTCCTGGGCGAATGAGGAAGTTTCGATGGAAAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 90 bp CCAACAGCTCATCCATGTTGGCATCCATGGCATTCTCATCCATACTaGCCAATGGCAATCGAGGCTTCAAAGCTTGGTACTGATTCCTGT +
Preference number: 5 (lower is better)
Translates to: PTAHPCWHPWHSHPY*PMAIEASKLGTDSC
Trigger: ACAGGAATCAGTACCAAGCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGATGAGAATGCCATGGATGCCAACATGGATGAGCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCCTAAGTCTTCTCTCCTCGTGGTTCCTTTaGATAACTCACTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: RWRRQPHFYIRSCGLSLLSSWFL*ITHFLP
Trigger: AGGAAGGAAGTGAGTTATCAAAAGGAACCACGAGGA...GAGAAGACTTAGGCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CATGCCTGGCCCAAATCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGAACATCTACTCCCAGTaGCTTAAGTCTATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: HAWPKSSLLKALSFGDLGNIYSQ*LKSIQS
Trigger: ACTCTGGATAGACTTAAGCAACTGGGAGTAGATGTT...CCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGATTTGGGCCAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CTAAGAAAATACAGGTGGAGACGTCAGCCCCATTTCTACATCAGATCCTGTGGCAGGAAGCCAACTGCCTaGCCAATTTCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: LRKYRWRRQPHFYIRSCGRKPTA*PISLLP
Trigger: TGGCAGTAGTGAAATTGGCAAGGCAGTTGGCTTCCT...GCCACAGGATCTGATGTAGAAATGGGGCTGACGTCTCCACCTGTATTTTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCTCGAGGCTTCAAAGCTaGGTACTGATTCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASRLQS*VLIPVV
Trigger: AACCACAGGAATCAGTACCAAGCTTTGAAGCCTCGA...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTCAGAGTCTTTCTGACTaGGGTACCAGTTTAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCQSLSD*GTSLSP
Trigger: AGGACTTAAACTGGTACCCAAGTCAGAAAGACTCTG...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAAGACGGGGTTTCACCTaGTTGGTCAGTCTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTRRGFT*LVSLVS
Trigger: GGAGACCAGACTGACCAACAAGGTGAAACCCCGTCT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTGGCATATGGGTCAGATaGAAACTGTCCATGTCAATC +
Preference number: 5 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCGIWVR*KLSMSI
Trigger: GATTGACATGGACAGTTTCAATCTGACCCATATGCC...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS GCA 90 bp AAGAGCCTGAGCAAAGAGCAAGTGCTTCTTCCATTGGATCACCCATaGTGCTCTCCTTCTCCTGTTTATTTAACTCTGATGAGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KSLSKEQVLLPLDHP*CSPSPVYLTLMRLE
Trigger: CTCCAGCCTCATCAGAGTTAAATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGGAAGAAGCACTTGCTCTTTGCTCAGGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 90 bp CTCATCCATGTTGGCATCCATGGCATTCTCATCCATACTGGCCAATaGCAATCGAGGCTTCAAAGCTTGGTACTGATTCCTGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LIHVGIHGILIHTGQ*QSRLQSLVLIPVVS
Trigger: AGAAACCACAGGAATCAGTACCAAGCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGATGAGAATGCCATGGATGCCAACATGGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 90 bp CCAGGACCATCGCTGTGCAGATCCCCATCAGCAAGGTACCTCTCTTaGTATAAACGTAGCTGTCGCTTATCATCATCCAACATAGTTTTC +
Preference number: 5 (lower is better)
Translates to: PGPSLCRSPSARYLS*YKRSCRLSSSNIVF
Trigger: GAAAACTATGTTGGATGATGATAAGCGACAGCTACGTTTATACCAAGAGAGGTACCTTGCTGATGGGGATCTGCACAGCGATGGTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCTCTCTGGAGAGGCATTaGTGTCCTCTGTTTCGGAAT +
Preference number: 5 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLSLERH*CPLFRN
Trigger: ATTCCGAAACAGAGGACACAAATGCCTCTCCAGAGA...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp TCCTCACTCCTAAAGGCTCTCAGCTTTGGTGATCTAGGGTTATGCAGTTCTGCCAGTTTGCTAGGCTGCTaGCCTGAGTTTTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: SSLLKALSFGDLGLCSSASLLGC*PEFSSV
Trigger: AACAGATGAAAACTCAGGCAAGCAGCCTAGCAAACT...GGCAGAACTGCATAACCCTAGATCACCAAAGCTGAGAGCCTTTAGGAGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCATCTGCATCCAACAGTaGGCTCTGAGTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLICIQQ*ALSVIF
Trigger: GAAGATGACACTCAGAGCCAACTGTTGGATGCAGAT...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTCGTCTTCCTCTTCCTaGTCTGTGGGAAAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLSSSSS*SVGKEP
Trigger: AGGCTCTTTTCCCACAGACAAGGAAGAGGAAGACGA...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS CCA 90 bp ACTTTCCAGTACACAAATCCAACAGCTCATCCATGTTGGCATCCATaGCATTCTCATCCATACTGGCCAATGGCAATCGAGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: TFQYTNPTAHPCWHP*HSHPYWPMAIEASK
Trigger: CTTTGAAGCCTCGATTGCCATTGGCCAGTATGGATGAGAATGCCATGGATGCCAACATGGATGAGCTGTTGGATTTGTGTACTGGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTTCCTCGTGGTTCCTTTaGATAACTCACTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLSSWFL*ITHFLP
Trigger: AGGAAGGAAGTGAGTTATCAAAAGGAACCACGAGGA...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCCATTTTCTGCACCTGTaGTCTGCTCAGAACCTTTAC +
Preference number: 5 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLHFLHL*SAQNLY
Trigger: GTAAAGGTTCTGAGCAGACAACAGGTGCAGAAAATG...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTGTTTCTTCTGGATTTaGGGGGCCTTCACCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSCFFWI*GAFTLQ
Trigger: CTGGAGGGTGAAGGCCCCCAAAATCCAGAAGAAACA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCATCCTCATCCAGTTaGCTAGGCTGCTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSSSSS*LGCLPE
Trigger: CTCAGGCAAGCAGCCTAGCAAACTGGATGAGGATGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCATCCTCATCCAGTTaGCTAGGCTGCTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSSSSS*LGCLPE
Trigger: CTCAGGCAAGCAGCCTAGCAAACTGGATGAGGATGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTATCTGCATCCAACAGTaGGCTCTGAGTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLICIQQ*ALSVIF
Trigger: GAAGATGACACTCAGAGCCAACTGTTGGATGCAGAT...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACAAGTGCTTCTTCCATaGGATCACCCATGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTQVLLP*DHPCCS
Trigger: AGAGCAGCATGGGTGATCCAATGGAAGAAGCACTTG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp CTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTTGCCTTGGGAACTGTTTTCCTCAACCTCATTaGCCTTTTCAACTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LPAQFSFAQQGLLCLGNCFPQPH*PFQLLR
Trigger: TCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAAA...ACAGTTCCCAAGGCAAAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp TCTCTCTGCCCCACAGACTGTGGTGGACAAACACTGGGTGTAACACTTTATCTTAAGAAGGAAGGATCATaGGCTGGAGTGTCAATTCCA +
Preference number: 5 (lower is better)
Translates to: SLCPTDCGGQTLGVTLYLKKEGS*AGVSIP
Trigger: TGGAATTGACACTCCAGCCAATGATCCTTCCTTCTT...AAGATAAAGTGTTACACCCAGTGTTTGTCCACCACAGTCTGTGGGGCAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCCAGCTATTCCAAAGGTaGAGGAAGGAGGATGCTGAA +
Preference number: 5 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLQLFQR*RKEDAE
Trigger: TTCAGCATCCTCCTTCCTCAACCTTTGGAATAGCTG...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAACGGGGTTTCACCTTGTaGGTCAGTCTGGTCTCCAAC +
Preference number: 5 (lower is better)
Translates to: KDHWLECQFQLSVLETSQRGFTL*VSLVSN
Trigger: GTTGGAGACCAGACTGACCAACAAGGTGAAACCCCG...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS TCA 90 bp GGTCTGATGGCTTCAAAAGGATTTCTGAGCAAAGACTTTGATTCCTaGATAACCATAGGGCGACTGGCATTCTTCTGCAGTGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: GLMASKGFLSKDFDS*ITIGRLAFFCSALA
Trigger: AGCCAAAGCACTGCAGAAGAATGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGCCATCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 90 bp ACTTCCTGGTCTGATGGCTTCAAAAGGATTTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGGGCGACTGGCATTCTTCTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: TSWSDGFKRISEQRL*FLNNHRATGILLQC
Trigger: GCACTGCAGAAGAATGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGCCATCAGACCAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 90 bp TCATCAGCACCTAGCCGTGGTTTAATGGAAACATCTACTCCCAGTTaGTTAAGTCTATCCAGAGTAAACCGTCTCACTTTTTCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: SSAPSRGLMETSTPS*LSLSRVNRLTFSGG
Trigger: GCCACCTGAAAAAGTGAGACGGTTTACTCTGGATAGACTTAAGCAACTGGGAGTAGATGTTTCCATTAAACCACGGCTAGGTGCTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 90 bp AGGATGGAATCGTGGAGCCAATCAGCTCAAAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATGAACATGAATCATCCTCATCCAGTT +
Preference number: 5 (lower is better)
Translates to: RMESWSQSAQSCYCG*SPLLAMNMNHPHPV
Trigger: AACTGGATGAGGATGATTCATGTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 90 bp TGCAAGGCTGATAGGATGGAATCGTGGAGCCAATCAGCTCAAAGCTaGTATTGTGGCTGCTCTCCTTTGTTAGCAATGAACATGAATCAT +
Preference number: 5 (lower is better)
Translates to: CKADRMESWSQSAQS*YCGCSPLLAMNMNH
Trigger: ATGATTCATGTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCTATCAGCCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCACTCAAGGGTCCAATaGTTTCATAGCTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKHSRVQ*FHSCPV
Trigger: GACAGGGCAGCTATGAAACAATTGGACCCTTGAGTG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTTTGTTCCCGAGGAAGTaGGATTCCTGTTGCAACACT +
Preference number: 5 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCLFPRK*DSCCNT
Trigger: AGTGTTGCAACAGGAATCCAACTTCCTCGGGAACAA...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATGTTTCTTCTGGATTTaGGGGGCCTTCACCCTCCAG +
Preference number: 5 (lower is better)
Translates to: KDHWLECQFQLSVLETSQCFFWI*GAFTLQ
Trigger: CTGGAGGGTGAAGGCCCCCAAAATCCAGAAGAAACA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTGCTTTTCACCTGGTTTaGTGTGGCTTGCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSAFHLV*CGLLHP
Trigger: TGGATGGAGCAAGCCACACAAAACCAGGTGAAAAGC...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGAAGCCAACTGCCTaGCCAATTTCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSRKPTA*PISLLP
Trigger: TGGCAGTAGTGAAATTGGCAAGGCAGTTGGCTTCCT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000373220.7
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGGAAGCCAACTGCCTaGCCAATTTCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKRKPTA*PISLLP
Trigger: TGGCAGTAGTGAAATTGGCAAGGCAGTTGGCTTCCT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000373220.7
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGCAAGTGCTTCTTCCATaGGATCACCCATGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQQVLLP*DHPCCS
Trigger: AGAGCAGCATGGGTGATCCAATGGAAGAAGCACTTG...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCGTCTTCCTCTTCCTaGTCTGTGGGAAAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSSSSS*SVGKEP
Trigger: AGGCTCTTTTCCCACAGACAAGGAAGAGGAAGACGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGTCGTCTTCCTCTTCCTaGTCTGTGGGAAAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSSSSS*SVGKEP
Trigger: AGGCTCTTTTCCCACAGACAAGGAAGAGGAAGACGA...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACTCGTGCTATCATCTGTTTaGAGGTGCTTAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: EQGRNKNTDTEPTLSPTLVLSSV*RCLGEG
Trigger: TCCTTCACCTAAGCACCTCAAAACAGATGATAGCAC...GAGTGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACACAGCAGCCCATCTGTaGGTTCCTAGGTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNTAAHL*VPRSSI
Trigger: GATGGAGGACCTAGGAACCAACAGATGGGCTGCTGT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCCAGCAAGGGCTACTTaGCCTTGGGAACTGTTTAGA +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSPARAT*PWELFR
Trigger: TCTAAACAGTTCCCAAGGCAAAGTAGCCCTTGCTGG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS TCA 90 bp TGGTTTCTAACATTTAAGAACCCATCTGCATCCAACAGTTGGCTCTaGGTGTCATCTTCTAAACAGAACTGGAAGTCTCCTGCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: WFLTFKNPSASNSWL*VSSSKQNWKSPAPR
Trigger: CCTAGGAGCAGGAGACTTCCAGTTCTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGATGCAGATGGGTTCTTAAATGTTAGAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS GCA 90 bp CTTCATCTGAATCTCCTTCACTCAAGGGTCCAATTGTTTCATAGCTaGCCTGTCCACTATCTGAAGGACTATCTGCTTCCTCTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: LHLNLLHSRVQLFHS*PVHYLKDYLLPLVK
Trigger: TTTCACAAGAGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGCAGCTATGAAACAATTGGACCCTTGAGTGAAGGAGATTCAGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 90 bp AGGATGGAATCGTGGAGCCAATCAGCTCAAAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATGAACATGAATCATCCTCATCTAAAG +
Preference number: 5 (lower is better)
Translates to: RMESWSQSAQSCYCG*SPLLAMNMNHPHLK
Trigger: CTTTAGATGAGGATGATTCATGTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517467.1
CDS CCA 90 bp GAGAAAGTGTATGAAAGACAAAGTTTCTTGAATTTCGAGGAGCACTaGGGTTATGGTCAGAGAGAGCAGCCAGTTTCTGAAGCACAGCTT +
Preference number: 5 (lower is better)
Translates to: EKVYERQSFLNFEEH*GYGQREQPVSEAQL
Trigger: AAGCTGTGCTTCAGAAACTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTCATACACTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCTCATGTATGTGCTTTTaGGAACTCTTTCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLSCMCF*ELFLSV
Trigger: CACTGACAGAAAGAGTTCCAAAAAGCACATACATGA...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACATTTTCTGCACCTGTaGTCTGCTCAGAACCTTTAC +
Preference number: 5 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTHFLHL*SAQNLY
Trigger: GTAAAGGTTCTGAGCAGACAACAGGTGCAGAAAATG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTTGTTCCCGAGGAAGTaGGATTCCTGTTGCAACACT +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSLFPRK*DSCCNT
Trigger: AGTGTTGCAACAGGAATCCAACTTCCTCGGGAACAA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTGTTCCCGAGGAAGTaGGATTCCTGTTGCAACACT +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSLFPRK*DSCCNT
Trigger: AGTGTTGCAACAGGAATCCAACTTCCTCGGGAACAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTGTTTCTTCTGGATTTaGGGGGCCTTCACCCTCCAG +
Preference number: 5 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNCFFWI*GAFTLQ
Trigger: CTGGAGGGTGAAGGCCCCCAAAATCCAGAAGAAACA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTATCTGCATCCAACAGTaGGCTCTGAGTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSICIQQ*ALSVIF
Trigger: GAAGATGACACTCAGAGCCAACTGTTGGATGCAGAT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCGAGGCTTCAAAGCTaGGTACTGATTCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSRLQS*VLIPVV
Trigger: AACCACAGGAATCAGTACCAAGCTTTGAAGCCTCGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTTCGAGGCTTCAAAGCTaGGTACTGATTCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSSRLQS*VLIPVV
Trigger: AACCACAGGAATCAGTACCAAGCTTTGAAGCCTCGA...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTCGAGGCTTCAAAGCTaGGTACTGATTCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSSRLQS*VLIPVV
Trigger: AACCACAGGAATCAGTACCAAGCTTTGAAGCCTCGA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAACAGCTCATCCATGTaGGCATCCATGGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSNSSSM*ASMAFS
Trigger: TGAGAATGCCATGGATGCCAACATGGATGAGCTGTT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAACAGCTCATCCATGTaGGCATCCATGGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSNSSSM*ASMAFS
Trigger: TGAGAATGCCATGGATGCCAACATGGATGAGCTGTT...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTCTTCTGCAGTGCTTaGGCTGTAACTTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSFFCSA*AVTFLA
Trigger: GGCCAAGAAAGTTACAGCCAAAGCACTGCAGAAGAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GAAGAAATATCTAGCCTTCCTGCTCAGTTCTCTTTTGCCCAGCAAGGGCTACTTGAAAGACAAAGTTTCTaGAATTTCGAGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: EEISSLPAQFSFAQQGLLERQSF*NFEEHW
Trigger: CCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTC...AAGTAGCCCTTGCTGGGCAAAAGAGAACTGAGCAGGAAGGCTAGATATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS TCA 90 bp CTTTCTTGTCACTCTTCCTGGGTAGATGTTTTTCAGCCTGAGATGTaGACTTTCCAGTACACAAATCCAACAGCTCATCCATGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LSCHSSWVDVFQPEM*TFQYTNPTAHPCWH
Trigger: ATGCCAACATGGATGAGCTGTTGGATTTGTGTACTGGAAAGTTCACATCTCAGGCTGAAAAACATCTACCCAGGAAGAGTGACAAGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCCTCGTGGTTCCTTTaGATAACTCACTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSSWFL*ITHFLP
Trigger: AGGAAGGAAGTGAGTTATCAAAAGGAACCACGAGGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCATTTTCTGCACCTGTaGTCTGCTCAGAACCTTTAC +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSHFLHL*SAQNLY
Trigger: GTAAAGGTTCTGAGCAGACAACAGGTGCAGAAAATG...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCATTTTCTGCACCTGTaGTCTGCTCAGAACCTTTAC +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKHFLHL*SAQNLY
Trigger: GTAAAGGTTCTGAGCAGACAACAGGTGCAGAAAATG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGGCTTCCAGTTCTCTGTaGGTTTCAGGTTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQASSSL*VSGSSI
Trigger: GATACTTGAACCTGAAACCAACAGAGAACTGGAAGC...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTGCTTCCAGTTCTCTGTaGGTTTCAGGTTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSASSSL*VSGSSI
Trigger: GATACTTGAACCTGAAACCAACAGAGAACTGGAAGC...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318121.8
ENST00000520551.1
CDS-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACGCTTTTCACCTGGTTTaGTGTGGCTTGCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNAFHLV*CGLLHP
Trigger: TGGATGGAGCAAGCCACACAAAACCAGGTGAAAAGC...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAGTTTGCTAGGCTGCTaGCCTGAGTTTTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKSLLGC*PEFSSV
Trigger: AACAGATGAAAACTCAGGCAAGCAGCCTAGCAAACT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGTTTGCTAGGCTGCTaGCCTGAGTTTTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSLLGC*PEFSSV
Trigger: AACAGATGAAAACTCAGGCAAGCAGCCTAGCAAACT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAATCTGCATCCAACAGTaGGCTCTGAGTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: KDHWLECQFQLSVLETSQICIQQ*ALSVIF
Trigger: GAAGATGACACTCAGAGCCAACTGTTGGATGCAGAT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATCAATTGTTTGTTCTGCCCAGAATAGCCCTTCTCCGCCTCTCTTTGGACTCCAAACTCATTATCATTaGAAACAAGCCGAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SSIVCSAQNSPSPPLFGLQTHYH*KQAESL
Trigger: GAGACTTTCGGCTTGTTTCAAATGATAATGAGTTTG...GAGTCCAAAGAGAGGCGGAGAAGGGCTATTCTGGGCAGAACAAACAATTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATTCTTCTGCAGTGCTTaGGCTGTAACTTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KDHWLECQFQLSVLETSQFFCSA*AVTFLA
Trigger: GGCCAAGAAAGTTACAGCCAAAGCACTGCAGAAGAA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTGAAAGACAAAGTTTCTaGAATTTCGAGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCERQSF*NFEEHW
Trigger: CCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTC...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGTGCTATCATCTGTTTaGAGGTGCTTAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKVLSSV*RCLGEG
Trigger: TCCTTCACCTAAGCACCTCAAAACAGATGATAGCAC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGTGCTATCATCTGTTTaGAGGTGCTTAGGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSVLSSV*RCLGEG
Trigger: TCCTTCACCTAAGCACCTCAAAACAGATGATAGCAC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACAACAGTGCTTCAAATaGAGAATTCAGTCCCAGGAA +
Preference number: 5 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTQQCFK*RIQSQE
Trigger: TTCCTGGGACTGAATTCTCAATTTGAAGCACTGTTG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTGTAATCCCTGCTATTaGGGAGGCCGAGGCAGAATT +
Preference number: 5 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNCNPCY*GGRGRI
Trigger: AATTCTGCCTCGGCCTCCCAAATAGCAGGGATTACA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS TCA 90 bp TTGGAACTCTTTCTGTCAGTGGTAAAGTCTGTAGAGTTTCCAGACTaGAGACTCAGCTCTAAGCAAGGTTTCACTTGCGCTTCAAGATTT +
Preference number: 5 (lower is better)
Translates to: LELFLSVVKSVEFPD*RLSSKQGFTCASRF
Trigger: AAATCTTGAAGCGCAAGTGAAACCTTGCTTAGAGCTGAGTCTTCAGTCTGGAAACTCTACAGACTTTACCACTGACAGAAAGAGTTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 90 bp AGAGTCACTGTGTTCATCCTCATCACTATCAAACTCATTATCATTTaGAACAAGCCGAAAGTCTCCAAATTCCTCCTCCTCGTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RVTVFILITIKLIII*NKPKVSKFLLLVFL
Trigger: GAGGAAGACGAGGAGGAGGAATTTGGAGACTTTCGGCTTGTTTCAAATGATAATGAGTTTGATAGTGATGAGGATGAACACAGTGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 90 bp GGTCTGATGGCTTCAAAAGGATTTCTGAGCAAAGACTTTGATTCCTaGATAACCATAGGGCGACTGGCTCTAACACTTAGGTATACAATC +
Preference number: 5 (lower is better)
Translates to: GLMASKGFLSKDFDS*ITIGRLALTLRYTI
Trigger: GATTGTATACCTAAGTGTTAGAGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGCCATCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466308.1
CDS CCA 90 bp TCAAACCCATCTTCATTATCTAATTTAAACAGTGCTTGGCGCTTCTaGCGCTCCTCAAACCTTCGGAGTTTCATTGCTTCTTGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: SNPSSLSNLNSAWRF*RSSNLRSFIASCSL
Trigger: TAAACTGCAAGAAGCAATGAAACTCCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATTAGATAATGAAGATGGGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAACACTCAAGGGTCCAATaGTTTCATAGCTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKEHSRVQ*FHSCPV
Trigger: GACAGGGCAGCTATGAAACAATTGGACCCTTGAGTG...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAATCCTCGTGGTTCCTTTaGATAACTCACTTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: KDHWLECQFQLSVLETSQSSWFL*ITHFLP
Trigger: AGGAAGGAAGTGAGTTATCAAAAGGAACCACGAGGA...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGAACATCTACTCCCAGTaGCTTAAGTCTATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKNIYSQ*LKSIQS
Trigger: ACTCTGGATAGACTTAAGCAACTGGGAGTAGATGTT...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTAACATCTACTCCCAGTaGCTTAAGTCTATCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSNIYSQ*LKSIQS
Trigger: ACTCTGGATAGACTTAAGCAACTGGGAGTAGATGTT...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AGGGTTATGCAGTTCTGCCCAGACCACAGAGCCATAAAGTCATCAATTGTTTGTTTTCCTCAACCTCATTaGCCTTTTCAACTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: RVMQFCPDHRAIKSSIVCFPQPH*PFQLLR
Trigger: TCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAAA...ACAAACAATTGATGACTTTATGGCTCTGTGGTCTGGGCAGAACTGCATAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACTTCTTCTGCAGTGCTTaGGCTGTAACTTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNFFCSA*AVTFLA
Trigger: GGCCAAGAAAGTTACAGCCAAAGCACTGCAGAAGAA...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGGAAAGACAAAGTTTCTaGAATTTCGAGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKERQSF*NFEEHW
Trigger: CCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTC...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCGAAAGACAAAGTTTCTaGAATTTCGAGGAGCACTGG +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSERQSF*NFEEHW
Trigger: CCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTC...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACAATGCTGAAATGTCCATaGATTAGTGAGGGCAATGTA +
Preference number: 5 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTMLKCP*ISEGNV
Trigger: TACATTGCCCTCACTAATCAATGGACATTTCAGCAT...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGAGCTTTTCACCTCTGTaGGTTTCAGGTTCAAGTATC +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSFSPL*VSGSSI
Trigger: GATACTTGAACCTGAAACCAACAGAGGTGAAAAGCT...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373220.7
CDS TCA 90 bp TTTGTTTCTATTTCTTCACTACTAAGAAGGAATTCTGCAGTCTCCTaGTTTCCTTCTTCTTCCTCCTCCTCTTCTTTCTCCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FVSISSLLRRNSAVS*FPSSSSSSSFSSSS
Trigger: GGAAGAGGAGGAGAAAGAAGAGGAGGAGGAAGAAGAAGGAAATCAGGAGACTGCAGAATTCCTTCTTAGTAGTGAAGAAATAGAAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
CDS-3UTR CAA 90 bp GATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCTCATGTATGTGCTTTTaGGAACTCTTTCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: DHWLECQFQLSVLETSQSSCMCF*ELFLSV
Trigger: CACTGACAGAAAGAGTTCCAAAAAGCACATACATGA...GCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCATGTATGTGCTTTTaGGAACTCTTTCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SLAGVSIPTFSARNFSKQSCMCF*ELFLSV
Trigger: CACTGACAGAAAGAGTTCCAAAAAGCACATACATGA...CTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AGAGACCTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAGTTTGCTAGGCTGCTaGCCTGAGTTTTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: RDLFKEVNTMYPYSSVWNSLLGC*PEFSSV
Trigger: AACAGATGAAAACTCAGGCAAGCAGCCTAGCAAACT...GTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAGGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp ATGGAACAAGGAAGAAACAAAAACACTGACACTGAGCCTACCCTATCTCCCACACAAACTCATTATCATTaGAAACAAGCCGAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: MEQGRNKNTDTEPTLSPTQTHYH*KQAESL
Trigger: GAGACTTTCGGCTTGTTTCAAATGATAATGAGTTTG...TGTGGGAGATAGGGTAGGCTCAGTGTCAGTGTTTTTGTTTCTTCCTTGTTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTTTTCCTCAACCTCATTaGCCTTTTCAACTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSFPQPH*PFQLLR
Trigger: TCTGAGAAGTTGAAAAGGCAAATGAGGTTGAGGAAA...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp TTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTCTCAAACTCATTATCATTaGAAACAAGCCGAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: LAGVSIPTFSARNFSKQSQTHYH*KQAESL
Trigger: GAGACTTTCGGCTTGTTTCAAATGATAATGAGTTTG...AGACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp GGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAAACTCATTATCATTaGAAACAAGCCGAAAGTCTC +
Preference number: 5 (lower is better)
Translates to: GSLAGVSIPTFSARNFSKQTHYH*KQAESL
Trigger: GAGACTTTCGGCTTGTTTCAAATGATAATGAGTTTG...CTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp AAGGATCATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAATTGCATCAATTAAATaGGTGTTCCCATCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: KDHWLECQFQLSVLETSQIASIK*VFPSPS
Trigger: ACTGGGAGATGGGAACACCAATTTAATTGATGCAAT...TTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATGATCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS-3UTR CAA 90 bp CATTGGCTGGAGTGTCAATTCCAACTTTCAGTGCTAGAAACTTCTCAAAGCAGTAAAGTAACCCAGAGTTaGACTCAAGTTTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: HWLECQFQLSVLETSQSSKVTQS*TQVFFL
Trigger: GAGAAAGAAAACTTGAGTCAAACTCTGGGTTACTTT...ACTGCTTTGAGAAGTTTCTAGCACTGAAAGTTGGAATTGACACTCCAGCCAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS TCA 90 bp ACTTCATTTTCTGCACCTGTTGTCTGCTCAGAACCTTTACTATGGTaGTCACTGTTCATTTCAGTAGTATTTGCAGTGTCTATGATTTCT +
Preference number: 5 (lower is better)
Translates to: TSFSAPVVCSEPLLW*SLFISVVFAVSMIS
Trigger: AGAAATCATAGACACTGCAAATACTACTGAAATGAACAGTGATCACCATAGTAAAGGTTCTGAGCAGACAACAGGTGCAGAAAATGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS-3UTR CAA 90 bp CTGTTTAAAGAGGTTAATACCATGTATCCCTACTCAAGTGTATGGAACAAGGAATCATGTATGTGCTTTTaGGAACTCTTTCTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: LFKEVNTMYPYSSVWNKESCMCF*ELFLSV
Trigger: CACTGACAGAAAGAGTTCCAAAAAGCACATACATGA...TTCCTTGTTCCATACACTTGAGTAGGGATACATGGTATTAACCTCTTTAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318121.8
CDS GCA 72 bp AGAACCCACCTCGCCTGTCATGACTTCTGCCTCCCCTaGGCTCCACTAGGGACGGAGCTGTCTCTGATTCCC +
Preference number: 6 (lower is better)
Translates to: RTHLACHDFCLP*APLGTELSLIP
Trigger: GGGAATCAGAGACAGCTCCGTCCCTAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp GTGAACCTCAGAACCCACCTCGCCTGTCATGACTTCTaGCTCCCCTGCGCTCCACTAGGGACGGAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: VNLRTHLACHDF*LPCAPLGTELS
Trigger: AGACAGCTCCGTCCCTAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGGGTTCTGAGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp TTTCTAGGTGAACCTCAGAACCCACCTCGCCTGTCATaGCTTCTGCCTCCCCTGCGCTCCACTAGGGACGGA +
Preference number: 6 (lower is better)
Translates to: FLGEPQNPPRLS*LLPPLRSTRDG
Trigger: TCCGTCCCTAGTGGAGCGCAGGGGAGGCAGAAGTCATGACAGGCGAGGTGGGTTCTGAGGTTCACCTAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp TTGGGGGCCTTCACCCTCCAGGGCATGAGGTTCAAATaGTACAAGCCCTCCAACCTGACATTCCTCACTGTG +
Preference number: 6 (lower is better)
Translates to: LGAFTLQGMRFK*YKPSNLTFLTV
Trigger: CACAGTGAGGAATGTCAGGTTGGAGGGCTTGTAGCATTTGAACCTCATGCCCTGGAGGGTGAAGGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp GTAATTTTCCCCTGCTGTGCCATGTCCCGAAGCCACTaGTCTCGTTCAATTCGCTCCTTCCTCCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: VIFPCCAMSRSH*SRSIRSFLHLA
Trigger: AGCCAGGTGGAGGAAGGAGCGAATTGAACGAGAGCAGTGGCTTCGGGACATGGCACAGCAGGGGAAAATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp CATCGAAACTTCCTCATTCGCCCAGGACCATCGCTGTaGAGATCCCCATCAGCAAGGTACCTCTCTTGGTAT +
Preference number: 6 (lower is better)
Translates to: HRNFLIRPGPSL*RSPSARYLSWY
Trigger: ATACCAAGAGAGGTACCTTGCTGATGGGGATCTGCACAGCGATGGTCCTGGGCGAATGAGGAAGTTTCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp GTTCACATTCACTGTCTGACCAGCCCTGGGTTTGGCTaGTGGATTAGCATGCTTCCAGAAACGCTGCTTCAA +
Preference number: 6 (lower is better)
Translates to: VHIHCLTSPGFG*WISMLPETLLQ
Trigger: TTGAAGCAGCGTTTCTGGAAGCATGCTAATCCAGCAGCCAAACCCAGGGCTGGTCAGACAGTGAATGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000520551.1
CDS CCA 72 bp CCCACGGCCTGTTTGTCTGTTGCAAGGCTGATAGGATaGAATCGTGGAGCCAATCAGCTCAAAGCTGCTATT +
Preference number: 6 (lower is better)
Translates to: PTACLSVARLIG*NRGANQLKAAI
Trigger: AATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCTATCAGCCTTGCAACAGACAAACAGGCCGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS TCA 72 bp GCTCTTCCTTTCCATCAGTGCCCATGTCTTTCACTATaGCGTTCACATTCACTGTCTGACCAGCCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: ALPFHQCPCLSL*RSHSLSDQPWV
Trigger: AACCCAGGGCTGGTCAGACAGTGAATGTGAACGTCATAGTGAAAGACATGGGCACTGATGGAAAGGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000520551.1
CDS CCA 72 bp CTGTTTGTCTGTTGCAAGGCTGATAGGATGGAATCGTaGAGCCAATCAGCTCAAAGCTGCTATTGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LFVCCKADRMES*SQSAQSCYCGC
Trigger: GCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCTATCAGCCTTGCAACAGACAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS CAA 72 bp AGGCTCTTCCACTTTCTCATCTGTTTCTTCTGGATTTaGGGGGCCTTCACCCTCCAGGGCATGAGGTTCAAA +
Preference number: 6 (lower is better)
Translates to: RLFHFLICFFWI*GAFTLQGMRFK
Trigger: TTTGAACCTCATGCCCTGGAGGGTGAAGGCCCCCAAAATCCAGAAGAAACAGATGAGAAAGTGGAAGAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp CTCTCGTTCAATTCGCTCCTTCCTCCACCTGGCTTCTaGCTCATCAAGCTGTTCTTCAGTCTGATCATCATC +
Preference number: 6 (lower is better)
Translates to: LSFNSLLPPPGF*LIKLFFSLIII
Trigger: GATGATGATCAGACTGAAGAACAGCTTGATGAGTCAGAAGCCAGGTGGAGGAAGGAGCGAATTGAACGAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 72 bp GTTGGCATCCATGGCATTCTCATCCATACTGGCCAATaGCAATCGAGGCTTCAAAGCTTGGTACTGATTCCT +
Preference number: 6 (lower is better)
Translates to: VGIHGILIHTGQ*QSRLQSLVLIP
Trigger: AGGAATCAGTACCAAGCTTTGAAGCCTCGATTGCCATTGGCCAGTATGGATGAGAATGCCATGGATGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp GATAGGATGGAATCGTGGAGCCAATCAGCTCAAAGCTaGTATTGTGGCTGCTCTCCTTTGTTAGCAATGAAC +
Preference number: 6 (lower is better)
Translates to: DRMESWSQSAQS*YCGCSPLLAMN
Trigger: GTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCCATCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS GCA 72 bp CTTCTCTGGGATCTTCTGAGACTTAGACGATTCCTTTaGCGCCTCAGCCTTGACAGGAGAAAGTGTATGAAA +
Preference number: 6 (lower is better)
Translates to: LLWDLLRLRRFL*RLSLDRRKCMK
Trigger: TTTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAAAGGAATCGTCTAAGTCTCAGAAGATCCCAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251195.9
CDS CCA 72 bp TACACAAATCCAACAGCTCATCCATGTTGGCATCCATaGCATTCTCATCCATACTGGCCAATGGCAATCGAG +
Preference number: 6 (lower is better)
Translates to: YTNPTAHPCWHP*HSHPYWPMAIE
Trigger: CTCGATTGCCATTGGCCAGTATGGATGAGAATGCCATGGATGCCAACATGGATGAGCTGTTGGATTTGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp AATCTCCTTCACTCAAGGGTCCAATTGTTTCATAGCTaGCCTGTCCACTATCTGAAGGACTATCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: NLLHSRVQLFHS*PVHYLKDYLLP
Trigger: AGGAAGCAGATAGTCCTTCAGATAGTGGACAGGGCAGCTATGAAACAATTGGACCCTTGAGTGAAGGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp TCGTGGAGCCAATCAGCTCAAAGCTGCTATTGTGGCTaGTCTCCTTTGTTAGCAATGAACATGAATCATCCT +
Preference number: 6 (lower is better)
Translates to: SWSQSAQSCYCG*SPLLAMNMNHP
Trigger: AGGATGATTCATGTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS GCA 72 bp ACCCCTTTTCTTTACCTGAGACTTAGACGATTCCTTTaGCGCCTCAGCCTTGACAGGAGAAAGTGTATGAAA +
Preference number: 6 (lower is better)
Translates to: TPFLYLRLRRFL*RLSLDRRKCMK
Trigger: TTTCATACACTTTCTCCTGTCAAGGCTGAGGCGGCAAAGGAATCGTCTAAGTCTCAGGTAAAGAAAAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS CCA 72 bp GGAATCGTGGAGCCAATCAGCTCAAAGCTGCTATTGTaGCTGCTCTCCTTTGTTAGCAATGAACATGAATCA +
Preference number: 6 (lower is better)
Translates to: GIVEPISSKLLL*LLSFVSNEHES
Trigger: TGATTCATGTTCATTGCTAACAAAGGAGAGCAGCCACAATAGCAGCTTTGAGCTGATTGGCTCCACGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS CCA 72 bp ACTTTCCAGTACACAAATCCAACAGCTCATCCATGTTaGCATCCATGGCATTCTCATCCATACTGGCCAATG +
Preference number: 6 (lower is better)
Translates to: TFQYTNPTAHPC*HPWHSHPYWPM
Trigger: CATTGGCCAGTATGGATGAGAATGCCATGGATGCCAACATGGATGAGCTGTTGGATTTGTGTACTGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CAA 72 bp TCTCTTCATCTGAATCTCCTTCACTCAAGGGTCCAATaGTTTCATAGCTGCCCTGTCCACTATCTGAAGGAC +
Preference number: 6 (lower is better)
Translates to: SLHLNLLHSRVQ*FHSCPVHYLKD
Trigger: GTCCTTCAGATAGTGGACAGGGCAGCTATGAAACAATTGGACCCTTGAGTGAAGGAGATTCAGATGAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp CACTCTTCCTGGGTAGATGTTTTTCAGCCTGAGATGTaGACTTTCCAGTACACAAATCCAACAGCTCATCCA +
Preference number: 6 (lower is better)
Translates to: HSSWVDVFQPEM*TFQYTNPTAHP
Trigger: TGGATGAGCTGTTGGATTTGTGTACTGGAAAGTTCACATCTCAGGCTGAAAAACATCTACCCAGGAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS GCA 72 bp AGCAAAGAGCAAGTGCTTCTTCCATTGGATCACCCATaGTGCTCTCCTTCTCCTGTTTATTTAACTCTGATG +
Preference number: 6 (lower is better)
Translates to: SKEQVLLPLDHP*CSPSPVYLTLM
Trigger: CATCAGAGTTAAATAAACAGGAGAAGGAGAGCAGCATGGGTGATCCAATGGAAGAAGCACTTGCTCTTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 72 bp TATTTAGATGACTTCAATAGTGCCATGGCATTTCCGTaGCAAGTGGGCCGGGGTTTACGTTTGAAGAAATCA +
Preference number: 6 (lower is better)
Translates to: YLDDFNSAMAFP*QVGRGLRLKKS
Trigger: TGATTTCTTCAAACGTAAACCCCGGCCCACTTGCCACGGAAATGCCATGGCACTATTGAAGTCATCTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CAA 72 bp AACTTTCCAGTACACAAATCCAACAGCTCATCCATGTaGGCATCCATGGCATTCTCATCCATACTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: NFPVHKSNSSSM*ASMAFSSILAN
Trigger: ATTGGCCAGTATGGATGAGAATGCCATGGATGCCAACATGGATGAGCTGTTGGATTTGTGTACTGGAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp ACATTTAAGAACCCATCTGCATCCAACAGTTGGCTCTaGGTGTCATCTTCTAAACAGAACTGGAAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: TFKNPSASNSWL*VSSSKQNWKSP
Trigger: AGGAGACTTCCAGTTCTGTTTAGAAGATGACACTCAGAGCCAACTGTTGGATGCAGATGGGTTCTTAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000517467.1
ENST00000520551.1
CDS TCA 72 bp GCTTCAAAAGGATTTCTGAGCAAAGACTTTGATTCCTaGATAACCATAGGGCGACTGGCATTCTTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: ASKGFLSKDFDS*ITIGRLAFFCS
Trigger: ACTGCAGAAGAATGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp CTTGACAGGAGAAAGTGTATGAAAGACAAAGTTTCTTaGATTTCGAGGAGCACTGGGGTTATGGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: LDRRKCMKDKVS*ISRSTGVMVRE
Trigger: CTCTCTGACCATAACCCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTCATACACTTTCTCCTGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS TCA 72 bp GCTTCAAAAGGATTTCTGAGCAAAGACTTTGATTCCTaGATAACCATAGGGCGACTGGCTCTAACACTTAGG +
Preference number: 6 (lower is better)
Translates to: ASKGFLSKDFDS*ITIGRLALTLR
Trigger: CCTAAGTGTTAGAGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466308.1
CDS TCA 72 bp TCTGATGGCTTCAAAAGGATTTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGGGCGACTGGCTCTAAC +
Preference number: 6 (lower is better)
Translates to: SDGFKRISEQRL*FLNNHRATGSN
Trigger: GTTAGAGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGCCATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466308.1
CDS GCA 72 bp CCTAGCCGTGGTTTAATGGAAACATCTACTCCCAGTTaGTTAAGTCTATCCAGAGTAAACCGTCTCACTTTT +
Preference number: 6 (lower is better)
Translates to: PSRGLMETSTPS*LSLSRVNRLTF
Trigger: AAAAGTGAGACGGTTTACTCTGGATAGACTTAAGCAACTGGGAGTAGATGTTTCCATTAAACCACGGCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 72 bp TCTTCATTATCTAATTTAAACAGTGCTTGGCGCTTCTaGCGCTCCTCAAACCTTCGGAGTTTCATTGCTTCT +
Preference number: 6 (lower is better)
Translates to: SSLSNLNSAWRF*RSSNLRSFIAS
Trigger: AGAAGCAATGAAACTCCGAAGGTTTGAGGAGCGCCAGAAGCGCCAAGCACTGTTTAAATTAGATAATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS CCA 72 bp TATGAAAGACAAAGTTTCTTGAATTTCGAGGAGCACTaGGGTTATGGTCAGAGAGAGCAGCCAGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: YERQSFLNFEEH*GYGQREQPVSE
Trigger: TTCAGAAACTGGCTGCTCTCTCTGACCATAACCCCAGTGCTCCTCGAAATTCAAGAAACTTTGTCTTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS TCA 72 bp TATGGAAGGTTCAGTGCAGACTCTCGAATAAGGCGCTaGGTCTCACTATGCAGTTGTTTTAATGCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: YGRFSADSRIRR*VSLCSCFNASL
Trigger: TAAAGAAGCATTAAAACAACTGCATAGTGAGACTCAGCGCCTTATTCGAGAGTCTGCACTGAACCTTCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp TCTGATGGCTTCAAAAGGATTTCTGAGCAAAGACTTTaGTTCCTGAATAACCATAGGGCGACTGGCATTCTT +
Preference number: 6 (lower is better)
Translates to: SDGFKRISEQRL*FLNNHRATGIL
Trigger: AAGAATGCCAGTCGCCCTATGGTTATTCAGGAATCAAAGTCTTTGCTCAGAAATCCTTTTGAAGCCATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1
CDS TCA 72 bp TTTGGCACCTTTGATGGTGTTAGCTCTCCAAATATTTaGAGATGCTTCGCGTCAATCCTGAAGTGCTATCAT +
Preference number: 6 (lower is better)
Translates to: FGTFDGVSSPNI*RCFASILKCYH
Trigger: ATGATAGCACTTCAGGATTGACGCGAAGCATCTTCAAATATTTGGAGAGCTAACACCATCAAAGGTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318121.8
ENST00000373220.7
ENST00000466308.1
ENST00000520551.1
CDS TCA 72 bp GTGTTCATCCTCATCACTATCAAACTCATTATCATTTaGAACAAGCCGAAAGTCTCCAAATTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: VFILITIKLIII*NKPKVSKFLLL
Trigger: GAGGAGGAGGAATTTGGAGACTTTCGGCTTGTTTCAAATGATAATGAGTTTGATAGTGATGAGGATGAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000251195.9
ENST00000318121.8
ENST00000373220.7
ENST00000520551.1