Pregenerated sensors for CLRN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000180745Ensembl transcript IDs: ENST00000368671.4
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCAGGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTaGATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAAC | + |
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Preference number: 1 (lower is better) Translates to: DQVRRVVTLIMILLL*IPHRPATFPIHFPN Trigger: GTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR TCA 90 bp | ATTTCAGATCGTGAGACCAGGTCAGAAGGGTCGTTACGCTCATCATaGTACTACTGCTTTGAATACCACACAGACCAGCGACATTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: ISDRETRSEGSLRSS*YYCFEYHTDQRHFP Trigger: TGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCTCACGATCTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR TCA 90 bp | GGAAAAATTTTCAGGAGTACAGCATCAATGAAGAACACAGTGTCATaGAACACAAATGCTGTCACAGATGACAGTCACGTTACCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: GKIFRSTASMKNTVS*NTNAVTDDSHVTML Trigger: CAGCATGGTAACGTGACTGTCATCTGTGACAGCATTTGTGTTTCATGACACTGTGTTCTTCATTGATGCTGTACTCCTGAAAATTTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR CAA 90 bp | AGACCAGGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTaGAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: RPGQKGRYAHHDTTA*NTTQTSDISHSFPQ Trigger: TTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR-3UTR TCA 90 bp | GAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAGTTACTACTCAGGGCTaGTGTACAATAGATGCAACG | + |
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Preference number: 2 (lower is better) Translates to: EYHTDQRHFPFISPTLWEVTTQG*CTIDAT Trigger: CGTTGCATCTATTGTACATCAGCCCTGAGTAGTAAC...TTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTAAATGCTGTCACAGATaGCAGTCACGTTACCATGCT | + |
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Preference number: 2 (lower is better) Translates to: ALNTTQTSDISHSFPQPCKCCHR*QSRYHA Trigger: AGCATGGTAACGTGACTGTCATCTGTGACAGCATTT...ACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR-3UTR TCA 90 bp | GAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAGGAGTACAGCATCAATaGAGAACACAGTGTCATGAA | + |
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Preference number: 2 (lower is better) Translates to: EYHTDQRHFPFISPTLWEGVQHQ*RTQCHE Trigger: TTCATGACACTGTGTTCTTCATTGATGCTGTACTCC...TTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR-3UTR TCA 90 bp | CCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAAAATTAAGAACACAGTGTCATaGAACACAAATGCTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: PHRPATFPIHFPNLVGKIKNTVS*NTNAVT Trigger: TGTGACAGCATTTGTGTTTCATGACACTGTGTTCTT...AATTTTTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR TCA 72 bp | CGTGAGACCAGGTCAGAAGGGTCGTTACGCTCATCATaGTACTACTGCTTTGAATACCACACAGACCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: RETRSEGSLRSS*YYCFEYHTDQR Trigger: TCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCTCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR-3UTR CAA 90 bp | GTGAGACCAGGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATCGTTACCATGCTGAATaGTCCAGAGAAGCTAACCAG | + |
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Preference number: 3 (lower is better) Translates to: VRPGQKGRYAHHDTTALNRYHAE*SREANQ Trigger: CTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACG...ATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR TCA 72 bp | TTCAGGAGTACAGCATCAATGAAGAACACAGTGTCATaGAACACAAATGCTGTCACAGATGACAGTCACGTT | + |
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Preference number: 3 (lower is better) Translates to: FRSTASMKNTVS*NTNAVTDDSHV Trigger: AACGTGACTGTCATCTGTGACAGCATTTGTGTTTCATGACACTGTGTTCTTCATTGATGCTGTACTCCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | GTGAGACCAGGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATAGCTCAGCAGCGACGTaGTCAAACTCAGGACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VRPGQKGRYAHHDTTALNSSAAT*SNSGPG Trigger: TCCTGGTCCTGAGTTTGATCACGTCGCTGCTGAGCT...ATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR GCA 90 bp | AATGCTGTCACAGATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAGGCTTTCTCTGCTCCTaGTTCCGCTGGTATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: NAVTDDSHVTMLNCPEKLGFLCS*FRWYLA Trigger: GGCCAGATACCAGCGGAAGCAGGAGCAGAGAAAGCC...TAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATCTGTGACAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CCA 90 bp | GAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAACTTCGGAGAGTTGGTTaGACTGCGTGTTCGCCACAA | + |
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Preference number: 4 (lower is better) Translates to: EYHTDQRHFPFISPTLWELRRVG*TACSPQ Trigger: TTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAG...TTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR GCA 90 bp | CCAGAGAAGCTAACCAGTTACTACTCAGGGCTGATGTACAATAGATGCAACGCCGAGAGTTGGTTGGACTaGGTGTTCGCCACAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: PEKLTSYYSGLMYNRCNAESWLD*VFATNS Trigger: ACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTC...GGCGTTGCATCTATTGTACATCAGCCCTGAGTAGTAACTGGTTAGCTTCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CCA 90 bp | ACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAAAATAACTCTTCGGAGAGTTaGTTGGACTGCGTGTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: TTQTSDISHSFPQPCGKNNSSES*LDCVFA Trigger: GGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTT...ATTTTTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CCA 90 bp | GTGAGACCAGGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATGGGTCGTTCCTTTACTaGTGGTTGCCGGGTAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRPGQKGRYAHHDTTALNGSFLY*WLPGKA Trigger: TGCTTTACCCGGCAACCACCAGTAAAGGAACGACCC...ATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | CCAGAGAAGCTAACCAGTTACTACTCAGGGCTGATGTACAATAGATGCAACGCCCAGCAATTGTACTGGTaGTCCATGCTTGTGTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PEKLTSYYSGLMYNRCNAQQLYW*SMLVSQ Trigger: TTGGGACACAAGCATGGATCACCAGTACAATTGCTG...GGCGTTGCATCTATTGTACATCAGCCCTGAGTAGTAACTGGTTAGCTTCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | GGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATACCACACAGGGTTCTGCAAGTCCGTaGCTCAATTCTTCACTACTC | + |
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Preference number: 4 (lower is better) Translates to: GQKGRYAHHDTTALNTTQGSASP*LNSSLL Trigger: GAGTAGTGAAGAATTGAGTCACGGACTTGCAGAACC...CTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | CCAGAGAAGCTAACCAGTTACTACTCAGGGCTGATGTACAATAGATGCAACGCCGTTACTACTCAGGGCTaGTGTACAATAGATGCAACG | + |
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Preference number: 4 (lower is better) Translates to: PEKLTSYYSGLMYNRCNAVTTQG*CTIDAT Trigger: CGTTGCATCTATTGTACATCAGCCCTGAGTAGTAAC...GGCGTTGCATCTATTGTACATCAGCCCTGAGTAGTAACTGGTTAGCTTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR GCA 90 bp | AAGCTAACCAGTTACTACTCAGGGCTGATGTACAATAGATGCAACGCCAAAATGTCCATTGGCTTTCTCTaGTCCTGCTTCCGCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: KLTSYYSGLMYNRCNAKMSIGFL*SCFRWY Trigger: ATACCAGCGGAAGCAGGAGCAGAGAAAGCCAATGGA...CATTTTGGCGTTGCATCTATTGTACATCAGCCCTGAGTAGTAACTGGTTAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| 3UTR CAA 72 bp | CAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTaGAATACCACACAGACCAGCGACATTTCCCATTCA | + |
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Preference number: 4 (lower is better) Translates to: QKGRYAHHDTTA*NTTQTSDISHS Trigger: TGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | CACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAAAATTTGAAAATGCTCCCATTTaGAGCAGAGTCTCTAACAGC | + |
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Preference number: 4 (lower is better) Translates to: HTDQRHFPFISPTLWEKFENAPI*SRVSNS Trigger: GCTGTTAGAGACTCTGCTTCAAATGGGAGCATTTTC...AAATTTTTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | AATGCTGTCACAGATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAAAATGCTGTCACAGATaGCAGTCACGTTACCATGCT | + |
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Preference number: 4 (lower is better) Translates to: NAVTDDSHVTMLNCPEKLKCCHR*QSRYHA Trigger: AGCATGGTAACGTGACTGTCATCTGTGACAGCATTT...TAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATCTGTGACAGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | AATGCTGTCACAGATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAATGATACTACTGCTTTaGATACCACACAGACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: NAVTDDSHVTMLNCPEKLMILLL*IPHRPA Trigger: CGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCAT...TAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATCTGTGACAGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | GCTCATCATGATACTACTGCTTTGAATACCACACAGACCAGCGACATTTCCCATTATTATTTCAGATCGTaGGACCAGGTCAGAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AHHDTTALNTTQTSDISHYYFRS*DQVRRV Trigger: GACCCTTCTGACCTGGTCTCACGATCTGAAATAATA...ATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR GCA 90 bp | TTTGAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGTGTACTGGTGATCCATaGTTGTGTCCCAAGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: FEYHTDQRHFPFISPTLWCTGDP*LCPKNR Trigger: TCTATTCTTGGGACACAAGCATGGATCACCAGTACA...CCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR GCA 90 bp | GATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAACCAGTTACTACTCCTTTACTGGTGGTTaGCGGGTAAAGCATTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: DDSHVTMLNCPEKLTSYYSFTGG*RVKHLE Trigger: TTCCAAATGCTTTACCCGGCAACCACCAGTAAAGGA...GTAGTAACTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CCA 90 bp | GATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAACCAGTTACTACTCGTTCCTTTACTGGTaGTTGCCGGGTAAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: DDSHVTMLNCPEKLTSYYSFLYW*LPGKAF Trigger: AAATGCTTTACCCGGCAACCACCAGTAAAGGAACGA...GTAGTAACTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | GGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATACCACACAGAAGAACACAGTGTCATaGAACACAAATGCTGTCACA | + |
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Preference number: 4 (lower is better) Translates to: GQKGRYAHHDTTALNTTQKNTVS*NTNAVT Trigger: TGTGACAGCATTTGTGTTTCATGACACTGTGTTCTT...CTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | GATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAACCAGTTACTACGGAGTACAGCATCAATaGAGAACACAGTGTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: DDSHVTMLNCPEKLTSYYGVQHQ*RTQCHE Trigger: TTCATGACACTGTGTTCTTCATTGATGCTGTACTCC...GTAGTAACTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR TCA 90 bp | ACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAAAATTCGTTACGCTCATCATaGTACTACTGCTTTGAATAC | + |
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Preference number: 4 (lower is better) Translates to: TTQTSDISHSFPQPCGKNSLRSS*YYCFEY Trigger: GTATTCAAAGCAGTAGTATCATGATGAGCGTAACGA...ATTTTTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR GCA 90 bp | ACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAAAATCTTTTTCTTTGGTTCTaGAAGTCCGTGACTCAATTC | + |
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Preference number: 4 (lower is better) Translates to: TTQTSDISHSFPQPCGKNLFLWF*KSVTQF Trigger: GAATTGAGTCACGGACTTGCAGAACCAAAGAAAAAG...ATTTTTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CCA 90 bp | GGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATACCACACAGTGCAAACTTTTTCTTTaGTTCTGCAAGTCCGTGACT | + |
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Preference number: 4 (lower is better) Translates to: GQKGRYAHHDTTALNTTQCKLFL*FCKSVT Trigger: AGTCACGGACTTGCAGAACCAAAGAAAAAGTTTGCA...CTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CCA 90 bp | ACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGGAAAAATCCACAAACAGTATCATaGTCACAAAAACGAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: TTQTSDISHSFPQPCGKNPQTVS*SQKRRM Trigger: CATCCTTCGTTTTTGTGACCATGATACTGTTTGTGG...ATTTTTCCCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CCA 90 bp | CTTCGGAGAGTTGGTTGGACTGCGTGTTCGCCACAAACAGTATCATaGTCACAAAAACGAAGGATGCACCGAGCCCGTTCCAGGTGTACA | + |
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Preference number: 5 (lower is better) Translates to: LRRVGWTACSPQTVS*SQKRRMHRARSRCT Trigger: TGTACACCTGGAACGGGCTCGGTGCATCCTTCGTTTTTGTGACCATGATACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS GCA 90 bp | CCAGAACGAGTATCCGTAACTGTGGGTCGTTCCTTTACTGGTGGTTaGCGGGTAAAGCATTTGGAACAACTCTTCGGAGAGTTGGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: PERVSVTVGRSFTGG*RVKHLEQLFGELVG Trigger: TCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCACCAGTAAAGGAACGACCCACAGTTACGGATACTCGTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | TTTGAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGTCTTCGGAGAGTTGGTaGGACTGCGTGTTCGCCACA | + |
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Preference number: 5 (lower is better) Translates to: FEYHTDQRHFPFISPTLWSSESW*DCVFAT Trigger: TGTGGCGAACACGCAGTCCAACCAACTCTCCGAAGA...CCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | GACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAACCAGTTACTACTCACAACTCTTCGGAGAGTaGGTTGGACTGCGTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: DSHVTMLNCPEKLTSYYSQLFGE*VGLRVR Trigger: GCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTG...TGAGTAGTAACTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CCA 90 bp | TGGTTGCCGGGTAAAGCATTTGGAACAACTCTTCGGAGAGTTGGTTaGACTGCGTGTTCGCCACAAACAGTATCATGGTCACAAAAACGA | + |
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Preference number: 5 (lower is better) Translates to: WLPGKAFGTTLRRVG*TACSPQTVSWSQKR Trigger: TCGTTTTTGTGACCATGATACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | TTTGAATACCACACAGACCAGCGACATTTCCCATTCATTTCCCCAACCTTGTGGTTCCTTTACTGGTGGTaGCCGGGTAAAGCATTTGGA | + |
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Preference number: 5 (lower is better) Translates to: FEYHTDQRHFPFISPTLWFLYWW*PGKAFG Trigger: TCCAAATGCTTTACCCGGCAACCACCAGTAAAGGAA...CCACAAGGTTGGGGAAATGAATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | GTGAGACCAGGTCAGAAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATTTGGAGCATATTCCATaGGCTTTCTCTGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VRPGQKGRYAHHDTTALNLEHIP*AFSAPA Trigger: AGCAGGAGCAGAGAAAGCCAATGGAATATGCTCCAA...ATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTTCTGACCTGGTCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | AAGGGTCGTTACGCTCATCATGATACTACTGCTTTGAATACCACACAGACCAGCCGTTACCATGCTGAATaGTCCAGAGAAGCTAACCAG | + |
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Preference number: 5 (lower is better) Translates to: KGRYAHHDTTALNTTQTSRYHAE*SREANQ Trigger: CTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACG...GCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGCGTAACGACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | ACAGATGACAGTCACGTTACCATGCTGAATTGTCCAGAGAAGCTAACCAGTTACCATGATACTACTGCTTaGAATACCACACAGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: TDDSHVTMLNCPEKLTSYHDTTA*NTTQTS Trigger: GCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATG...GTAACTGGTTAGCTTCTCTGGACAATTCAGCATGGTAACGTGACTGTCATCTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS-3UTR CAA 90 bp | GCTCATCATGATACTACTGCTTTGAATACCACACAGACCAGCGACATTTCCCATATAAAATTCCGTCCCTaGGAGCATATTCCATTGGCT | + |
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Preference number: 5 (lower is better) Translates to: AHHDTTALNTTQTSDISHIKFRP*EHIPLA Trigger: AGCCAATGGAATATGCTCCAAGGGACGGAATTTTAT...ATGGGAAATGTCGCTGGTCTGTGTGGTATTCAAAGCAGTAGTATCATGATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS TCA 90 bp | TACTACTCAGGGCTGATGTACAATAGATGCAACGCCAAAATGAGATaGAAGAGAATTCAGAATAAAATTCCGTCCCTTGGAGCATATTCC | + |
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Preference number: 5 (lower is better) Translates to: YYSGLMYNRCNAKMR*KRIQNKIPSLGAYS Trigger: GGAATATGCTCCAAGGGACGGAATTTTATTCTGAATTCTCTTTCATCTCATTTTGGCGTTGCATCTATTGTACATCAGCCCTGAGTAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CCA 72 bp | GTTGGTTGGACTGCGTGTTCGCCACAAACAGTATCATaGTCACAAAAACGAAGGATGCACCGAGCCCGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VGWTACSPQTVS*SQKRRMHRARS Trigger: GGAACGGGCTCGGTGCATCCTTCGTTTTTGTGACCATGATACTGTTTGTGGCGAACACGCAGTCCAACCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CAA 90 bp | GTAACTGTGGGTCGTTCCTTTACTGGTGGTTGCCGGGTAAAGCATTaGGAACAACTCTTCGGAGAGTTGGTTGGACTGCGTGTTCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: VTVGRSFTGGCRVKH*EQLFGELVGLRVRH Trigger: GTGGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCACCAGTAAAGGAACGACCCACAGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CAA 90 bp | GCCAGAACGAGTATCCGTAACTGTGGGTCGTTCCTTTACTGGTGGTaGCCGGGTAAAGCATTTGGAACAACTCTTCGGAGAGTTGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: ARTSIRNCGSFLYWW*PGKAFGTTLRRVGW Trigger: CCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCACCAGTAAAGGAACGACCCACAGTTACGGATACTCGTTCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS GCA 72 bp | GTATCCGTAACTGTGGGTCGTTCCTTTACTGGTGGTTaGCGGGTAAAGCATTTGGAACAACTCTTCGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VSVTVGRSFTGG*RVKHLEQLFGE Trigger: CTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCACCAGTAAAGGAACGACCCACAGTTACGGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CAA 90 bp | ACTGGTGGTTGCCGGGTAAAGCATTTGGAACAACTCTTCGGAGAGTaGGTTGGACTGCGTGTTCGCCACAAACAGTATCATGGTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: TGGCRVKHLEQLFGE*VGLRVRHKQYHGHK Trigger: TTTGTGACCATGATACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCACCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CAA 72 bp | TGCCGGGTAAAGCATTTGGAACAACTCTTCGGAGAGTaGGTTGGACTGCGTGTTCGCCACAAACAGTATCAT | + |
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Preference number: 6 (lower is better) Translates to: CRVKHLEQLFGE*VGLRVRHKQYH Trigger: ATGATACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CAA 72 bp | AGTATCCGTAACTGTGGGTCGTTCCTTTACTGGTGGTaGCCGGGTAAAGCATTTGGAACAACTCTTCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SIRNCGSFLYWW*PGKAFGTTLRR Trigger: TCTCCGAAGAGTTGTTCCAAATGCTTTACCCGGCAACCACCAGTAAAGGAACGACCCACAGTTACGGATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CAA 90 bp | GAAAGAGAATTCAGAATAAAATTCCGTCCCTTGGAGCATATTCCATaGGCTTTCTCTGCTCCTGCTTCCGCTGGTATCTGGCCTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EREFRIKFRPLEHIP*AFSAPASAGIWPSG Trigger: ACCAGAAGGCCAGATACCAGCGGAAGCAGGAGCAGAGAAAGCCAATGGAATATGCTCCAAGGGACGGAATTTTATTCTGAATTCTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS CCA 72 bp | GGTAAAGCATTTGGAACAACTCTTCGGAGAGTTGGTTaGACTGCGTGTTCGCCACAAACAGTATCATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: GKAFGTTLRRVG*TACSPQTVSWS Trigger: TGACCATGATACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCTTTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS GCA 72 bp | AGCATTTGGAACAACTCTTCGGAGAGTTGGTTGGACTaGGTGTTCGCCACAAACAGTATCATGGTCACAAAA | + |
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Preference number: 6 (lower is better) Translates to: SIWNNSSESWLD*VFATNSIMVTK Trigger: TTTTGTGACCATGATACTGTTTGTGGCGAACACGCAGTCCAACCAACTCTCCGAAGAGTTGTTCCAAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS TCA 72 bp | ACGAAAAAGTCCGTAAGTGATGAAAATGCTCCCATTTaGAGCAGAGTCTCTAACAGCAATTGTACTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TKKSVSDENAPI*SRVSNSNCTGD Trigger: ATCACCAGTACAATTGCTGTTAGAGACTCTGCTTCAAATGGGAGCATTTTCATCACTTACGGACTTTTTCGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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| CDS GCA 72 bp | AGCAGAGTCTCTAACAGCAATTGTACTGGTGATCCATaGTTGTGTCCCAAGAATAGAGCAAATTACAATGAA | + |
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Preference number: 6 (lower is better) Translates to: SRVSNSNCTGDP*LCPKNRANYNE Trigger: TTCATTGTAATTTGCTCTATTCTTGGGACACAAGCATGGATCACCAGTACAATTGCTGTTAGAGACTCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368671.4 |
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