Pregenerated sensors for CLPSL2 (Homo sapiens)
Ensembl gene IDs: ENSG00000196748Ensembl transcript IDs: ENST00000360454.6, ENST00000403376.4, ENST00000467122.1, ENST00000481904.5
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTaGTGGCAACCAGGGCCTATGGCCCCAAGGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DFNVSGAGFGAS*WQPGPMAPREQ Trigger: CTGCTCCCTTGGGGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGCCCCAAGGGAGCAGTGACCAGTGGTTATTCTGGCCCTaGGGGCACAGAAGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LEQVGGNQGLWPQGSSDQWLFWP*GHRRLH Trigger: GTGGAGCCTTCTGTGCCCCCAGGGCCAGAATAACCA...CTGGTCACTGCTCCCTTGGGGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR GCA 90 bp | AGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGCCCCAAGGGAGCATCAAGTCCTTGGATATaGACGTCAAGCCCATCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SWIWSKLVATRAYGPKGASSPWI*TSSPSG Trigger: GCCGGATGGGCTTGACGTGCATATCCAAGGACTTGA...TGCTCCCTTGGGGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | AGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGCCCCAAGGGAGCAAGATCATGGTTATTCTaGCCCTGGGGGCACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SWIWSKLVATRAYGPKGARSWLF*PWGHRR Trigger: CCTTCTGTGCCCCCAGGGCCAGAATAACCATGATCT...TGCTCCCTTGGGGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACGGAGTCCAAGTCCATaGGGCAGCAGCCACTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TGSDFNVSGAGFGASWWQRSPSP*GSSHCS Trigger: GCTACAGTGGCTGCTGCCTCATGGACTTGGACTCCG...TTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACTTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | GAAGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGGGCAAGCAGATCATaGTTATTCTGGCCCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: EVTLMSQELDLEQVGGNQGASRS*LFWPWG Trigger: CCCCCAGGGCCAGAATAACCATGATCTGCTTGCCCC...CTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | AGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGTTTGGAGCAAGTTGGTaGCAACCAGGGCCTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SDFNVSGAGFGASWWQPGFGASW*QPGPMA Trigger: GGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAAA...CCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | GACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTGTAGCTCCCTTGGTCTaGGGCAAGCAGATCATGGTT | + |
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Preference number: 4 (lower is better) Translates to: DFNVSGAGFGASWWQPGPVAPLV*GKQIMV Trigger: AACCATGATCTGCTTGCCCCAGACCAAGGGAGCTAC...AGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | CAGGAAGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCTCAGGAGCTGGATTTaGAGCAAGTTGGTGGCAACC | + |
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Preference number: 4 (lower is better) Translates to: QEVTLMSQELDLEQVGGNLRSWI*SKLVAT Trigger: GGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAG...GTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAAGGATTTGGAGCAAGTTaGTGGCAACCAGGGCCTATG | + |
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Preference number: 4 (lower is better) Translates to: TGSDFNVSGAGFGASWWQGFGAS*WQPGPM Trigger: CATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCC...TTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACTTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CCA 90 bp | TTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTATGAACACATCAAGTCCTTaGATATGCACGTCAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: FNVSGAGFGASWWQPGPMNTSSP*ICTSSP Trigger: TGGGCTTGACGTGCATATCCAAGGACTTGATGTGTT...CATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR TCA 90 bp | TTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGGAAGCACCTGTCTGTaGTTTTCTTTTTATATTGCG | + |
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Preference number: 4 (lower is better) Translates to: FNVSGAGFGASWWQPGPMGSTCL*FSFYIA Trigger: CGCAATATAAAAAGAAAATCACAGACAGGTGCTTCC...CATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR GCA 90 bp | GAAGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGATTTTCTTTTTATATTaGGGAAGCGCGCTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: EVTLMSQELDLEQVGGNQIFFLY*GSALQR Trigger: CCTCTGGAGCGCGCTTCCGCAATATAAAAAGAAAAT...CTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS GCA 90 bp | CCTTGGTCTCTCCCTTTCAGGCTGCCCGGCGCCTTCGGGCTCCAGTaGCCCGGCGGCGGGGCCACCCTCTCCTGCGGTCGCGGCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PWSLPFRLPGAFGLQ*PGGGATLSCGRGRL Trigger: CAGCCGGCCGCGACCGCAGGAGAGGGTGGCCCCGCCGCCGGGGCACTGGAGCCCGAAGGCGCCGGGCAGCCTGAAAGGGAGAGACCAAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467122.1 |
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| CDS TCA 90 bp | TTCTGGCCCTGGGGGCACAGAAGGCTCCACCGGAGTCCAAGTCCATaGGGCAGCAGCCACTGTAGCACTCAGAGTGGTGGAAGCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: FWPWGHRRLHRSPSP*GSSHCSTQSGGSTC Trigger: ACAGGTGCTTCCACCACTCTGAGTGCTACAGTGGCTGCTGCCTCATGGACTTGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360454.6 ENST00000403376.4 ENST00000481904.5 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGCCCCAAGGGAGCAGTGACCAGCAAGGGCAGATGATGTaGGTAGCTCCCTTGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LEQVGGNQGLWPQGSSDQQGQMM*VAPLVW Trigger: CCAGACCAAGGGAGCTACCAACATCATCTGCCCTTG...CTGGTCACTGCTCCCTTGGGGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CAA 90 bp | AGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGCCCCAAGGGAGCAGAACACATCAAGTCCTaGGATATGCACGTCAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SWIWSKLVATRAYGPKGAEHIKS*DMHVKP Trigger: GGGCTTGACGTGCATATCCAAGGACTTGATGTGTTC...TGCTCCCTTGGGGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CAA 90 bp | AATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACCAGGGCCTATGGCCATGTTGGTAGCTCCCTaGGTCTGGGGCAAGCAGATC | + |
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Preference number: 5 (lower is better) Translates to: NVSGAGFGASWWQPGPMAMLVAP*VWGKQI Trigger: GATCTGCTTGCCCCAGACCAAGGGAGCTACCAACAT...GGCCATAGGCCCTGGTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS-3UTR CAA 90 bp | CAGGAAGTGACTTTAATGTCTCAGGAGCTGGATTTGGAGCAAGTTGGTGGCAACGATTTTCTTTTTATATaGCGGAAGCGCGCTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: QEVTLMSQELDLEQVGGNDFLFI*RKRAPE Trigger: CTCTGGAGCGCGCTTCCGCAATATAAAAAGAAAATC...GTTGCCACCAACTTGCTCCAAATCCAGCTCCTGAGACATTAAAGTCACTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000403376.4 |
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| CDS GCA 72 bp | GATGTTGGTAGCTCCCTTGGTCTCTCCCTTTCAGGCTaGCCGGCGCCTTCGGGCTCCAGTGCCCCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: DVGSSLGLSLSG*PAPSGSSAPAA Trigger: CGCCGCCGGGGCACTGGAGCCCGAAGGCGCCGGGCAGCCTGAAAGGGAGAGACCAAGGGAGCTACCAACATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467122.1 |
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| CDS GCA 72 bp | GAAGCACCTGTCTGTGATTTTCTCTCCCTTTCAGGCTaGCCGGCGCCTTCGGGCTCCAGTGCCCCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: EAPVCDFLSLSG*PAPSGSSAPAA Trigger: CGCCGCCGGGGCACTGGAGCCCGAAGGCGCCGGGCAGCCTGAAAGGGAGAGAAAATCACAGACAGGTGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481904.5 |
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| CDS TCA 72 bp | TGGGGGCACAGAAGGCTCCACCGGAGTCCAAGTCCATaGGGCAGCAGCCACTGTAGCACTCAGAGTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: WGHRRLHRSPSP*GSSHCSTQSGG Trigger: TCCACCACTCTGAGTGCTACAGTGGCTGCTGCCTCATGGACTTGGACTCCGGTGGAGCCTTCTGTGCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000360454.6 ENST00000403376.4 ENST00000481904.5 |
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| CDS CCA 72 bp | CTCCCTTGGTCTGGGGCAAGCAGATCATGGTTATTCTaGCCCTGGGGGCACAGAAGGCTCCACCGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPWSGASRSWLF*PWGHRRLHRSP Trigger: TGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGAATAACCATGATCTGCTTGCCCCAGACCAAGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000403376.4 ENST00000481904.5 |
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| CDS CCA 72 bp | ACCACTGGGGCAAGCAGATCATGGTTATTCTGGCCCTaGGGGCACAGAAGGCTCCACCGGAGTCCAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TTGASRSWLFWP*GHRRLHRSPSP Trigger: TGGACTTGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGAATAACCATGATCTGCTTGCCCCAGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360454.6 |
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| CDS CCA 72 bp | GTTCCAACCACTGGGGCAAGCAGATCATGGTTATTCTaGCCCTGGGGGCACAGAAGGCTCCACCGGAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VPTTGASRSWLF*PWGHRRLHRSP Trigger: TGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGAATAACCATGATCTGCTTGCCCCAGTGGTTGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360454.6 |
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| CDS CCA 72 bp | TGGTCTGGGGCAAGCAGATCATGGTTATTCTGGCCCTaGGGGCACAGAAGGCTCCACCGGAGTCCAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WSGASRSWLFWP*GHRRLHRSPSP Trigger: TGGACTTGGACTCCGGTGGAGCCTTCTGTGCCCCCAGGGCCAGAATAACCATGATCTGCTTGCCCCAGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000403376.4 ENST00000481904.5 |
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| CDS CAA 72 bp | ATGCACGTCAAGCCCATCCGGCAAGGGCAGATGATGTaGGTAGCTCCCTTGGTCTGGGGCAAGCAGATCATG | + |
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Preference number: 6 (lower is better) Translates to: MHVKPIRQGQMM*VAPLVWGKQIM Trigger: CATGATCTGCTTGCCCCAGACCAAGGGAGCTACCAACATCATCTGCCCTTGCCGGATGGGCTTGACGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000403376.4 ENST00000481904.5 |
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| CDS CCA 72 bp | ATGATGCGATCCCTGCCCTTGAAGAGTTCCAACCACTaGGGCAAGCAGATCATGGTTATTCTGGCCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: MMRSLPLKSSNH*GKQIMVILALG Trigger: CCCCAGGGCCAGAATAACCATGATCTGCTTGCCCCAGTGGTTGGAACTCTTCAAGGGCAGGGATCGCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360454.6 |
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| CDS CCA 72 bp | AAATCATATGGCACCGGCGGGAACACATCAAGTCCTTaGATATGCACGTCAAGCCCATCCGGCAAGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KSYGTGGNTSSP*ICTSSPSGKGR Trigger: TCTGCCCTTGCCGGATGGGCTTGACGTGCATATCCAAGGACTTGATGTGTTCCCGCCGGTGCCATATGATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000360454.6 ENST00000403376.4 ENST00000467122.1 ENST00000481904.5 |
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