Pregenerated sensors for CLPSL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000204140Ensembl transcript IDs: ENST00000373861.6, ENST00000428710.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTCATGGTGGAGGCTCTGGGGAACAGGGTGAACACAGAGCTCTaGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: PLMVEALGNRVNTEL*VGRRAGGGGGGSKK Trigger: CTTCTTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTCACCCTGTTCCCCAGAGCCTCCACCATGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| 3UTR CCA 72 bp | GTGGAGGCTCTGGGGAACAGGGTGAACACAGAGCTCTaGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: VEALGNRVNTEL*VGRRAGGGGGG Trigger: GCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTCACCCTGTTCCCCAGAGCCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| 3UTR CCA 72 bp | AAAGCAAAGACACAGGAAGTGCTGGCATTCTTTTGGTaGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCC | + |
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Preference number: 3 (lower is better) Translates to: KAKTQEVLAFFW*LVALDLLFKVA Trigger: GGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCACCAAAAGAATGCCAGCACTTCCTGTGTCTTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAATGCACGCCGACCATGTaGGTGTCCTCCCAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQCTPTM*VSSQLW Trigger: CCACAGCTGGGAGGACACCCACATGGTCGGCGTGCA...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR GCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAGCGTTTGACACAGACTaGCCTCGGACCCCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQAFDTD*PRTPSP Trigger: CGGAGAAGGGGTCCGAGGGCAGTCTGTGTCAAACGC...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAATCCCTCCACTCATGGTaGAGGCTCTGGGGAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQSLHSW*RLWGTG Trigger: CCCTGTTCCCCAGAGCCTCCACCATGAGTGGAGGGA...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR GCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAACCCTTCTCCGCGCAGTaGGACTCGCAATTGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQPFSAQ*DSQLSG Trigger: TCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGG...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAATTGGGGTAGCATCATaGCCCACAGGTCGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQIGVAS*PTGRGG Trigger: GCCACCACGACCTGTGGGCCATGATGCTACCCCAAT...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAACCAGTCTCGCAGTCCTaGTTCCGGATGCAAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQPVSQS*FRMQDS Trigger: GGAGTCTTGCATCCGGAACCAGGACTGCGAGACTGG...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAATTGTCTGGAGCACGTTaGCAGCAGCCAGTCTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQLSGAR*QQPVSQ Trigger: CTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAA...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAACGACTCGCAATTGTCTaGAGCACGTTGGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQRLAIV*STLAAA Trigger: GGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCG...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR TCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAAAGAACACCTGCGTTTaGCACAGACTGCCCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQKNTCV*HRLPSD Trigger: GTCCGAGGGCAGTCTGTGTCAAACGCAGGTGTTCTT...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR GCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAATCCAGCGAAATATCCTaGACGCCGACCATGTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQSSEIS*TPTMWV Trigger: CACCCACATGGTCGGCGTGCAGGATATTTCGCTGGA...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAACTTCCCTCCACTCATaGTGGAGGCTCTGGGGAACA | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQTSLHS*WRLWGT Trigger: TGTTCCCCAGAGCCTCCACCATGAGTGGAGGGAAGT...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR GCA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCGCGTTTGACACAGACTaGCCTCGGACCCCTTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: WLVALDLLFKVATCLSSSAFDTD*PRTPSP Trigger: CGGAGAAGGGGTCCGAGGGCAGTCTGTGTCAAACGC...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CCA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAGGACACGCTCTATATTaGCCAAAGAACACCTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: EHRALGREESRWRRRRQQGHALY*PKNTCV Trigger: AACGCAGGTGTTCTTTGGCCAATATAGAGCGTGTCC...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCCGAAGGCAGGAAGCATaGAGTAGCTGGCAGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: WLVALDLLFKVATCLSSSRRQEA*SSWQLR Trigger: ACGCAGCTGCCAGCTACTCCATGCTTCCTGCCTTCG...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCGAAGCATGGAGTAGCTaGCAGCTGCGTTTGACACAG | + |
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Preference number: 4 (lower is better) Translates to: WLVALDLLFKVATCLSSSEAWSS*QLRLTQ Trigger: CTGTGTCAAACGCAGCTGCCAGCTACTCCATGCTTC...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR TCA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCCTTAGCAGCAGCTCATaGCTTCACGTTCTCACCGTA | + |
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Preference number: 4 (lower is better) Translates to: WLVALDLLFKVATCLSSSLSSSS*LHVLTV Trigger: TACGGTGAGAACGTGAAGTCATGAGCTGCTGCTAAG...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR GCA 90 bp | AAAGCAAAGACACAGGAAGTGCTGGCATTCTTTTGGTGGCTGGTAGCTCTTGACCCCTTCTCCGCGCAGTaGGACTCGCAATTGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KAKTQEVLAFFWWLVALDPFSAQ*DSQLSG Trigger: TCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGG...GTCAAGAGCTACCAGCCACCAAAAGAATGCCAGCACTTCCTGTGTCTTTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCGTGCTGGCATTCTTTTaGTGGCTGGTAGCTCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: WLVALDLLFKVATCLSSSVLAFF*WLVALD Trigger: GTCAAGAGCTACCAGCCACCAAAAGAATGCCAGCAC...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CCA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCAGACACAGGAAGTGCTaGCATTCTTTTGGTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WLVALDLLFKVATCLSSSRHRKC*HSFGGW Trigger: CCAGCCACCAAAAGAATGCCAGCACTTCCTGTGTCT...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR TCA 90 bp | AAAGCAAAGACACAGGAAGTGCTGGCATTCTTTTGGTGGCTGGTAGCTCTTGACGTGGCTGGTAGCTCTTaGCCTTCTCTTCAAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: KAKTQEVLAFFWWLVALDVAGSS*PSLQGC Trigger: GCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCAC...GTCAAGAGCTACCAGCCACCAAAAGAATGCCAGCACTTCCTGTGTCTTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CCA 90 bp | AAAGCAAAGACACAGGAAGTGCTGGCATTCTTTTGGTGGCTGGTAGCTCTTGACCTGGCATTCTTTTGGTaGCTGGTAGCTCTTGACCTT | + |
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Preference number: 4 (lower is better) Translates to: KAKTQEVLAFFWWLVALDLAFFW*LVALDL Trigger: AAGGTCAAGAGCTACCAGCCACCAAAAGAATGCCAG...GTCAAGAGCTACCAGCCACCAAAAGAATGCCAGCACTTCCTGTGTCTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS CCA 90 bp | ACTGCCCTCGGACCCCTTCTCCGCGCAGTGCGACTCGCAATTGTCTaGAGCACGTTGGCAGCAGCCAGTCTCGCAGTCCTGGTTCCGGAT | + |
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Preference number: 5 (lower is better) Translates to: TALGPLLRAVRLAIV*STLAAASLAVLVPD Trigger: ATCCGGAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTCCGAGGGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CCA 90 bp | GACCCCTTCTCCGCGCAGTGCGACTCGCAATTGTCTGGAGCACGTTaGCAGCAGCCAGTCTCGCAGTCCTGGTTCCGGATGCAAGACTCC | + |
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Preference number: 5 (lower is better) Translates to: DPFSAQCDSQLSGAR*QQPVSQSWFRMQDS Trigger: GGAGTCTTGCATCCGGAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS GCA 90 bp | GGCCCACAGGTCGTGGTGGCTTTTCTAGGGTCCAGCGAAATATCCTaGACGCCGACCATGTGGGTGTCCTCCCAGCTGTGGGAACACCAT | + |
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Preference number: 5 (lower is better) Translates to: GPQVVVAFLGSSEIS*TPTMWVSSQLWEHH Trigger: ATGGTGTTCCCACAGCTGGGAGGACACCCACATGGTCGGCGTGCAGGATATTTCGCTGGACCCTAGAAAAGCCACCACGACCTGTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CAA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAACAGTGCGACTCGCAATaGTCTGGAGCACGTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: EHRALGREESRWRRRRQQQCDSQ*SGARWQ Trigger: CTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTG...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CAA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAAAAGAACACCTGCGTTaGACACAGACTGCCCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: EHRALGREESRWRRRRQQKEHLR*TQTALG Trigger: TCCGAGGGCAGTCTGTGTCAAACGCAGGTGTTCTTT...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CAA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAGGGACACGCTCTATATaGGCCAAAGAACACCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: EHRALGREESRWRRRRQQGTRSI*AKEHLR Trigger: ACGCAGGTGTTCTTTGGCCAATATAGAGCGTGTCCC...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCAGCTGGCAGCTGCGTTaGACACAGACTGCCCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: WLVALDLLFKVATCLSSSSWQLR*TQTALG Trigger: TCCGAGGGCAGTCTGTGTCAAACGCAGCTGCCAGCT...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CAA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAACGGATGCAAGACTCCTaGAGCTCCAAAAGGTTGTAT | + |
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Preference number: 5 (lower is better) Translates to: EHRALGREESRWRRRRQQRMQDS*SSKRLY Trigger: ATACAACCTTTTGGAGCTCAAGGAGTCTTGCATCCG...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCCAGTGCGACTCGCAATaGTCTGGAGCACGTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: WLVALDLLFKVATCLSSSQCDSQ*SGARWQ Trigger: CTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTG...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CAA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAAAAAGGTTGTATTTTGTaGGAGAAAGTGAGCCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EHRALGREESRWRRRRQQKGCIL*EKVSPW Trigger: CCAGGGGCTCACTTTCTCCAACAAAATACAACCTTT...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGTAGCTCTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCACCTTCTCTTCAAGGTaGCCACATGCCTTAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: WLVALDLLFKVATCLSSSTFSSR*PHALAA Trigger: TGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGT...GCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAGAGCTACCAGCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS-3UTR CAA 90 bp | GAACACAGAGCTCTGGGTAGGGAGGAGAGCAGGTGGAGGAGGAGGAGGCAGCAATTGAGCTCCAAAAGGTaGTATTTTGTTGGAGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: EHRALGREESRWRRRRQQLSSKR*YFVGES Trigger: ACTTTCTCCAACAAAATACAACCTTTTGGAGCTCAA...TTGCTGCCTCCTCCTCCTCCACCTGCTCTCCTCCCTACCCAGAGCTCTGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS TCA 90 bp | CTTGACCTTCTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCTCATaGCTTCACGTTCTCACCGTATTCGAAGGCAGGAAGCATGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: LDLLFKVATCLSSSS*LHVLTVFEGRKHGV Trigger: TACTCCATGCTTCCTGCCTTCGAATACGGTGAGAACGTGAAGTCATGAGCTGCTGCTAAGGCATGTGGCAACCTTGAAGAGAAGGTCAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS TCA 90 bp | TTTCTGACAACGGCCATAGGCGATGCTAAGCCATTTCTCATTCTTTaGATATATACAAGTCAGGTTCCGCAGGCAGGGACACGCTCTATA | + |
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Preference number: 5 (lower is better) Translates to: FLTTAIGDAKPFLIL*IYTSQVPQAGTRSI Trigger: TATAGAGCGTGTCCCTGCCTGCGGAACCTGACTTGTATATATTCAAAGAATGAGAAATGGCTTAGCATCGCCTATGGCCGTTGTCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CAA 72 bp | CCCTCGGACCCCTTCTCCGCGCAGTGCGACTCGCAATaGTCTGGAGCACGTTGGCAGCAGCCAGTCTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSDPFSAQCDSQ*SGARWQQPVSQ Trigger: CTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTCCGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CCA 72 bp | GGACCCCTTCTCCGCGCAGTGCGACTCGCAATTGTCTaGAGCACGTTGGCAGCAGCCAGTCTCGCAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPLLRAVRLAIV*STLAAASLAVL Trigger: CAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CAA 90 bp | CACAGACTGCCCTCGGACCCCTTCTCCGCGCAGTGCGACTCGCAATaGTCTGGAGCACGTTGGCAGCAGCCAGTCTCGCAGTCCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: HRLPSDPFSAQCDSQ*SGARWQQPVSQSWF Trigger: GAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTCCGAGGGCAGTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CAA 90 bp | GGACCCCTTCTCCGCGCAGTGCGACTCGCAATTGTCTGGAGCACGTaGGCAGCAGCCAGTCTCGCAGTCCTGGTTCCGGATGCAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: GPLLRAVRLAIVWST*AAASLAVLVPDARL Trigger: GAGTCTTGCATCCGGAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGAGAAGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CCA 72 bp | TCCGCGCAGTGCGACTCGCAATTGTCTGGAGCACGTTaGCAGCAGCCAGTCTCGCAGTCCTGGTTCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SAQCDSQLSGAR*QQPVSQSWFRM Trigger: CATCCGGAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGACAATTGCGAGTCGCACTGCGCGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS GCA 72 bp | GTCGTGGTGGCTTTTCTAGGGTCCAGCGAAATATCCTaGACGCCGACCATGTGGGTGTCCTCCCAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VVVAFLGSSEIS*TPTMWVSSQLW Trigger: CCACAGCTGGGAGGACACCCACATGGTCGGCGTGCAGGATATTTCGCTGGACCCTAGAAAAGCCACCACGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS GCA 72 bp | TATATTGGCCAAAGAACACCTGCGTTTGACACAGACTaGCCTCGGACCCCTTCTCCGCGCAGTGCGACTCGC | + |
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Preference number: 6 (lower is better) Translates to: YIGQRTPAFDTD*PRTPSPRSATR Trigger: GCGAGTCGCACTGCGCGGAGAAGGGGTCCGAGGGCAGTCTGTGTCAAACGCAGGTGTTCTTTGGCCAATATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CCA 72 bp | TCTGGAGCACGTTGGCAGCAGCCAGTCTCGCAGTCCTaGTTCCGGATGCAAGACTCCTTGAGCTCCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SGARWQQPVSQS*FRMQDSLSSKR Trigger: CCTTTTGGAGCTCAAGGAGTCTTGCATCCGGAACCAGGACTGCGAGACTGGCTGCTGCCAACGTGCTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS CAA 72 bp | ACAAGTCAGGTTCCGCAGGCAGGGACACGCTCTATATaGGCCAAAGAACACCTGCGTTTGACACAGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: TSQVPQAGTRSI*AKEHLRLTQTA Trigger: GGCAGTCTGTGTCAAACGCAGGTGTTCTTTGGCCAATATAGAGCGTGTCCCTGCCTGCGGAACCTGACTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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| CDS TCA 72 bp | CTCTTCAAGGTTGCCACATGCCTTAGCAGCAGCTCATaGCTTCACGTTCTCACCGTATTCGAAGGCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LFKVATCLSSSS*LHVLTVFEGRK Trigger: CTTCCTGCCTTCGAATACGGTGAGAACGTGAAGTCATGAGCTGCTGCTAAGGCATGTGGCAACCTTGAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428710.1 |
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| CDS TCA 72 bp | ACGGCCATAGGCGATGCTAAGCCATTTCTCATTCTTTaGATATATACAAGTCAGGTTCCGCAGGCAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: TAIGDAKPFLIL*IYTSQVPQAGT Trigger: TGTCCCTGCCTGCGGAACCTGACTTGTATATATTCAAAGAATGAGAAATGGCTTAGCATCGCCTATGGCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373861.6 |
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