RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLPB (Homo sapiens)

Ensembl gene IDs: ENSG00000162129

Ensembl transcript IDs: ENST00000294053.9, ENST00000340729.9, ENST00000437826.6, ENST00000445069.4, ENST00000535477.6, ENST00000535990.5, ENST00000536297.1, ENST00000538021.5, ENST00000538039.6, ENST00000539148.3, ENST00000542555.2, ENST00000543042.6, ENST00000544382.5, ENST00000544683.5, ENST00000642187.1, ENST00000642288.1, ENST00000645105.1, ENST00000645650.1, ENST00000646117.1, ENST00000646359.1

Found 1641 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGCGATGGCGCTCTCCTGGCCAATGATGTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCCGC +
Preference number: 1 (lower is better)
Translates to: VAMALSWPMMCSFSR*SRGKRRRSSASRFR
Trigger: GCGGAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR TCA 90 bp TCCGGATCGCAGCACCCACTGTGGCGATGGCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCT +
Preference number: 1 (lower is better)
Translates to: SGSQHPLWRWRSPGQ*CAPLVAAPGGSGAA
Trigger: AGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGATCCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR GCA 90 bp ATCGCAGCACCCACTGTGGCGATGGCGCTCTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: IAAPTVAMALSWPMM*SFSRCSRGKRRRSS
Trigger: TGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR CCA 90 bp TCCTTCCTCCGGATCGCAGCACCCACTGTGGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTTAGTCGCTGCTCCAGGGGGAAGCGG +
Preference number: 1 (lower is better)
Translates to: SFLRIAAPTVAMALS*PMMCSFSRCSRGKR
Trigger: CCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGATCCGGAGGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR TCA 90 bp GTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTG +
Preference number: 1 (lower is better)
Translates to: VVPGCPVCESCCPCR*SPDAAWGGASQPGV
Trigger: CACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTaGCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTT +
Preference number: 1 (lower is better)
Translates to: GAGAIVHIVAVDQHI*HLAVPEQRDVVPLL
Trigger: AAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 90 bp TCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTC +
Preference number: 1 (lower is better)
Translates to: SAIRLRLISKASCLS*SACCAISSLATLEV
Trigger: GACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 90 bp CCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACA +
Preference number: 1 (lower is better)
Translates to: PRFSAIRLRLISKAS*LSCSACCAISSLAT
Trigger: TGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 90 bp ATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTAGATGGTGTTaGACACCTTCTCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: MVRAHRSRQVAARWC*TPSQGAVVPGCPVC
Trigger: GCAGACTGGACATCCGGGCACCACTGCACCCTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR TCA 90 bp GCCCAAGGATGCACCAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTaGAACATTGGCTGGTCTGTGAAATGCCCTTGGGGGACGGTGTCC +
Preference number: 1 (lower is better)
Translates to: AQGCTRPYCAWLRWA*NIGWSVKCPWGTVS
Trigger: GGACACCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 90 bp GGGAAGGTGGGTGGACTGCTTATCAGCAGTGGCTACTGTAGATGGTaGCCAAGGATGCACCAGGCCTTACTGTGCCTGGCTAAGGTGGGC +
Preference number: 1 (lower is better)
Translates to: GKVGGLLISSGYCRW*PRMHQALLCLAKVG
Trigger: GCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCCACTGCTGATAAGCAGTCCACCCACCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 90 bp ACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGC +
Preference number: 1 (lower is better)
Translates to: TAHLQSFLPQLQRVL*DLVAGHIGGHDEDG
Trigger: GCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 90 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAG +
Preference number: 1 (lower is better)
Translates to: RLRLISKASCLSCSA*CAISSLATLEVMMK
Trigger: CTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp GGCAGGTGGCTGCTAGATGGTGTTGCACACCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGAT +
Preference number: 1 (lower is better)
Translates to: GRWLLDGVAHLLRVQ*CPDVQSASLAVLVD
Trigger: ATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp CTTCTTGGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGCCACCTCGTGTCGCTCCTGGAACTC +
Preference number: 1 (lower is better)
Translates to: LLGQLATLLMANVAW*RPNKLGHLVSLLEL
Trigger: GAGTTCCAGGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR TCA 90 bp CCATCCCTCCTTGCCTTGAAGGGGGTGGAAAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCCAGA +
Preference number: 1 (lower is better)
Translates to: PSLLALKGVERQLLS*RLVSRLWAHNKGAR
Trigger: TCTGGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCTTTCCACCCCCTTCAAGGCAAGGAGGGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR TCA 90 bp AGCCGTCGACCAGCACATCTGCCACCTCGCGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAAGTTTAGTT +
Preference number: 1 (lower is better)
Translates to: SRRPAHLPPRGPRAA*CCAFAWLSWPRSLV
Trigger: AACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGATGTGCTGGTCGACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp ATGCACCAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTaGCTGGTCTGTGAAATGCCCTTGGGGGACGGTGTCCAGACCCTC +
Preference number: 1 (lower is better)
Translates to: MHQALLCLAKVGLKH*LVCEMPLGDGVQTL
Trigger: GAGGGTCTGGACACCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 90 bp TGGGGGAAGGTGGGTGGACTGCTTATCAGCAGTGGCTACTGTAGATaGTGCCCAAGGATGCACCAGGCCTTACTGTGCCTGGCTAAGGTG +
Preference number: 1 (lower is better)
Translates to: WGKVGGLLISSGYCR*CPRMHQALLCLAKV
Trigger: CACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCCACTGCTGATAAGCAGTCCACCCACCTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 90 bp TTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAG +
Preference number: 1 (lower is better)
Translates to: LSMISRRSLGRRFSA*GEGSSGLLSSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp TATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAGGGTGCAGTGGTGCCCGGATGTCCA +
Preference number: 1 (lower is better)
Translates to: YWMVRAHRSRQVAAR*CCTPSQGAVVPGCP
Trigger: TGGACATCCGGGCACCACTGCACCCTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp CAACTTCTTGGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTaGTGGAGACCCAATAAACTTGGCCACCTCGTGTCGCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: QLLGQLATLLMANVA*WRPNKLGHLVSLLE
Trigger: TTCCAGGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR GCA 90 bp AGGTGGCTGCTAGATGGTGTTGCACACCTTCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGAT +
Preference number: 1 (lower is better)
Translates to: RWLLDGVAHLLRVQW*PDVQSASLAVLVDD
Trigger: ATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGAGAAGGTGTGCAACACCATCTAGCAGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp GTGGAGCCATTCTGGGGACTGAGTTGCATGAGGACTAGCAGAGGGTaGCAGTTCAGTCTGGTCCCTGTCTTCTTCCAGCCAGCTGTGTTC +
Preference number: 1 (lower is better)
Translates to: VEPFWGLSCMRTSRG*QFSLVPVFFQPAVF
Trigger: GAACACAGCTGGCTGGAAGAAGACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCCCCAGAATGGCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR CCA 90 bp CTTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTGGAG +
Preference number: 1 (lower is better)
Translates to: LHQRAPQHWGTASTS*SAGHPPHGQRSLVE
Trigger: CTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR GCA 90 bp TGGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGCTGGCCACCCTCCTCATGGCCAACG +
Preference number: 1 (lower is better)
Translates to: WALSTSSKSTTALGH*FNFLVSWPPSSWPT
Trigger: CGTTGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR GCA 90 bp AACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGCCATaGACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCT +
Preference number: 1 (lower is better)
Translates to: NIERESGRMTTYEQP*TFPVSTLSSTLSPP
Trigger: AGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CCA 90 bp TGCCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATaGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: CLAAQWNMVVASPGG*KSGFPTLLLCKCPA
Trigger: GGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR TCA 90 bp AGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTaGGCTCTTCCTCCACTCCCAGTGGAGCCATTCTGGGGACTGAGT +
Preference number: 1 (lower is better)
Translates to: RRLQTKLQNYLHLGL*ALPPLPVEPFWGLS
Trigger: ACTCAGTCCCCAGAATGGCTCCACTGGGAGTGGAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR CCA 90 bp CGGCCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATaGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGGGCAC +
Preference number: 1 (lower is better)
Translates to: RPSSNSCSMMVSTSG*ALSTSSKSTTALGH
Trigger: GTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp CAGCCGGCCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGG +
Preference number: 1 (lower is better)
Translates to: QPALIKQLQHDGEHI*MGLVYFIKEHHSIG
Trigger: CCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGGCCGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR TCA 90 bp GGGCTGAGGCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATaGTCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGTCTT +
Preference number: 1 (lower is better)
Translates to: GLRLTPWPCGQRSNP*SLFLQLPNVCDVGL
Trigger: AAGACCAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGCCTCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR GCA 90 bp AGTGGCTACTGTAGATGGTGCCCAAGGATGCACCAGGCCTTACTGTaGCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAATG +
Preference number: 1 (lower is better)
Translates to: SGYCRWCPRMHQALL*LAKVGLKHWLVCEM
Trigger: CATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 90 bp CATCTGGATGGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCTCAT +
Preference number: 1 (lower is better)
Translates to: HLDGPCLLHQRAPQH*GTASTSWSAGHPPH
Trigger: ATGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCCATCCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR TCA 90 bp GTAGACAGTGATCCAAGCATCTGCTGGAGCTCACACCCTGGATTCTaGCTGCCTCATACCCACCATACTGTTAGGACATGCTTCCATTAC +
Preference number: 1 (lower is better)
Translates to: VDSDPSICWSSHPGF*LPHTHHTVRTCFHY
Trigger: GTAATGGAAGCATGTCCTAACAGTATGGTGGGTATGAGGCAGTCAGAATCCAGGGTGTGAGCTCCAGCAGATGCTTGGATCACTGTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 90 bp ACAGTGATCCAAGCATCTGCTGGAGCTCACACCCTGGATTCTGACTaGCTCATACCCACCATACTGTTAGGACATGCTTCCATTACCCAA +
Preference number: 1 (lower is better)
Translates to: TVIQASAGAHTLDSD*LIPTILLGHASITQ
Trigger: TTGGGTAATGGAAGCATGTCCTAACAGTATGGTGGGTATGAGGCAGTCAGAATCCAGGGTGTGAGCTCCAGCAGATGCTTGGATCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 90 bp TCTGTGAAATGCCCTTGGGGGACGGTGTCCAGACCCTCTGCTTTGTaGCTAACATGCAGACTGAATAAACTGCATGTTTATTCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: SVKCPWGTVSRPSAL*LTCRLNKLHVYSRL
Trigger: GAGCCTGGAATAAACATGCAGTTTATTCAGTCTGCATGTTAGTCACAAAGCAGAGGGTCTGGACACCGTCCCCCAAGGGCATTTCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 90 bp CTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAGCCATGTaGTCAAAGTTACCACCACCTAGTCTAGGTGTGGTGGCTCATGCC +
Preference number: 1 (lower is better)
Translates to: LILQWRNLAHTTLAM*SKLPPPSLGVVAHA
Trigger: GGCATGAGCCACCACACCTAGACTAGGTGGTGGTAACTTTGATCACATGGCTAAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 90 bp CATACTGTTAGGACATGCTTCCATTACCCAAGGGACTTTGATTCCTaGCCCCATTCTCTGCTTCCTGAAAGACTAGCTAACACTACGCGA +
Preference number: 1 (lower is better)
Translates to: HTVRTCFHYPRDFDS*PHSLLPERLANTTR
Trigger: TCGCGTAGTGTTAGCTAGTCTTTCAGGAAGCAGAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAATGGAAGCATGTCCTAACAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 90 bp GTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACTTATCTGGACATCCCCCAGGTTTTC +
Preference number: 1 (lower is better)
Translates to: VSFQDRANHILLEVL*DGDLVTYLDIPQVF
Trigger: GAAAACCTGGGGGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 90 bp GAAATCTGGGTCTCACCTTGCTGCATTGTCTCAGAGCTCAAATCCTaGCCACAGCAACATGGGACAAATAAAAATATGCTGAGCAAACAA +
Preference number: 1 (lower is better)
Translates to: EIWVSPCCIVSELKS*PQQHGTNKNMLSKQ
Trigger: TTGTTTGCTCAGCATATTTTTATTTGTCCCATGTTGCTGTGGCCAGGATTTGAGCTCTGAGACAATGCAGCAAGGTGAGACCCAGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 90 bp GGGCAATGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTaGCCAAATCTGAGCCAATTTGAGCAACCAAATAAACTGTTAGCA +
Preference number: 1 (lower is better)
Translates to: GQCRNNTVPTSMSSH*PNLSQFEQPNKLLA
Trigger: TGCTAACAGTTTATTTGGTTGCTCAAATTGGCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACATTGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 90 bp ATTATGGGAAATCCTTCCCATGATCAGAGACATGTCAATGTGGACTaGTCCATTCTTTTCCGTTATGAGCTCCCCATCAAGGAAACATTG +
Preference number: 1 (lower is better)
Translates to: IMGNPSHDQRHVNVD*SILFRYELPIKETL
Trigger: CAATGTTTCCTTGATGGGGAGCTCATAACGGAAAAGAATGGATCAGTCCACATTGACATGTCTCTGATCATGGGAAGGATTTCCCATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR TCA 90 bp TTAGAAGTTTTGGTTGAAACTTCTGATTATGGGAAATCCTTCCCATaGTCAGAGACATGTCAATGTGGACTGATCCATTCTTTTCCGTTA +
Preference number: 1 (lower is better)
Translates to: LEVLVETSDYGKSFP*SETCQCGLIHSFPL
Trigger: TAACGGAAAAGAATGGATCAGTCCACATTGACATGTCTCTGATCATGGGAAGGATTTCCCATAATCAGAAGTTTCAACCAAAACTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CCA 90 bp CCTGGTTTTGATAAACTACAGTATGGCTTTGTAGGATGTAATCATTaGGAGATGCTAGATGAAAGATACATGGGAATTTTCTACTATTTC +
Preference number: 1 (lower is better)
Translates to: PGFDKLQYGFVGCNH*EMLDERYMGIFYYF
Trigger: GAAATAGTAGAAAATTCCCATGTATCTTTCATCTAGCATCTCCCAATGATTACATCCTACAAAGCCATACTGTAGTTTATCAAAACCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 90 bp GGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCC +
Preference number: 2 (lower is better)
Translates to: GCSGARMSSLRVLLS*SMISRRSLGRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CAA 90 bp ACCTTCTCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGC +
Preference number: 2 (lower is better)
Translates to: TFSGCSGARMSSLRV*LSLSMISRRSLGRR
Trigger: GCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp TCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: SMISRRSLGRRFSAWGEGAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...GCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRLSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp TCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 2 (lower is better)
Translates to: SGCSGARMSSLRVLLSLSSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...CGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCAGTGCTCTCCCTTCTaGGCTCCTAGTGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGQCSPF*APSVLP
Trigger: AGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTG...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CAA 90 bp AGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: SLRVLLSLSMISRRS*GRRFSAWGEGSSGL
Trigger: AAGCCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 2 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp CCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 2 (lower is better)
Translates to: PASAAARAVRSRRWPHWRRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGACTTACTCCTTTTCCTaGCCCTCAGCCTCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWTYSFS*PSASGS
Trigger: GGACCCTGAGGCTGAGGGCCAGGAAAAGGAGTAAGT...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCCCCAGGACGTGGGGTaGGGAGGAACACTGGGCATA +
Preference number: 2 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLPQDVG*GGTLGI
Trigger: TATGCCCAGTGTTCCTCCTCACCCCACGTCCTGGGG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR GCA 90 bp CTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LIGCCQLVHHTAFYLMFDLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...ATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp TGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 2 (lower is better)
Translates to: CPDVQSASLAVLVDDLQTHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLSLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp CTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAACTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LQRVLCDLVAGHIGGHDELLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...TTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTTCAGCCTCAGGGTCCTaGCCTGCCACTTTCATATCT +
Preference number: 2 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGSASGS*PATFIS
Trigger: AGATATGAAAGTGGCAGGCCAGGACCCTGAGGCTGA...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CAA 90 bp TGCCCAAGGATGCACCAGGCCTTACTGTGCCTGGCTAAGGTGGGCTaGAAACATTGGCTGGTCTGTGAAATGCCCTTGGGGGACGGTGTC +
Preference number: 2 (lower is better)
Translates to: CPRMHQALLCLAKVG*KHWLVCEMPLGDGV
Trigger: GACACCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR GCA 90 bp GGCCACATTGGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: GHIGGHDEDGVLAINGLPLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...GGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp CACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCTCATGATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 2 (lower is better)
Translates to: HSIGALLQLLGQLATLLMISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...CATGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR GCA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 2 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCCTCAGGGTCCTGGCCTaGCACTTTCATATCTTGGTT +
Preference number: 2 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVLRVLA*HFHILV
Trigger: AACCAAGATATGAAAGTGGCAGGCCAGGACCCTGAG...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CAA 90 bp TGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTC +
Preference number: 2 (lower is better)
Translates to: CLSCSACCAISSLAT*EVMMKMASLQSMVF
Trigger: GAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp TTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAGGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 2 (lower is better)
Translates to: FSAWGEGSSGLLSSCLSEGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 2 (lower is better)
Translates to: LISKASCLSCSACCAISSAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp TGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: CPDVQSASLAVLVDDLQTCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...CGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp GCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: ASLQSMVFPFPSVSRPSSRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...TGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR GCA 90 bp GGCCACCTCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: GHLVSLLELGHVQPDEALTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...AAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR GCA 90 bp TCTGGGCTTTTGAGTAGCTGCTTGTCTGAGTCCTCCACCGTGATGCGCAAAGTACTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 2 (lower is better)
Translates to: SGLLSSCLSESSTVMRKVLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...TACTTTGCGCATCACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp ACATCTGCCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: TSATSRSQSSVMLCLCLASWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...AGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CCA 90 bp CTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAATCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LQRVLCDLVAGHIGGHDESLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...TTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCGGAGGTAAGCAGGCCTaGGACTGGGTAGAGATGGGA +
Preference number: 2 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSGGKQA*DWVEMG
Trigger: TCCCATCTCTACCCAGTCTCAGGCCTGCTTACCTCC...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAGCGATGTTGGTCTTTTaGAGGAGGCCCCCACAGAGC +
Preference number: 2 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTAMLVF*RRPPQS
Trigger: GCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGC...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR TCA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHICCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp CCAAGAACTGCTGCCACATCCACAAGTAGTCCTGCCCTTCAGTGGCTGTGCCCTCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 2 (lower is better)
Translates to: PRTAATSTSSPALQWLCPHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...AGGGCACAGCCACTGAAGGGCAGGACTACTTGTGGATGTGGCAGCAGTTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
3UTR-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGACCTCCATCCCTCCTTaGCTTGAAGGGGGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLTSIPP*LEGGGK
Trigger: CTTTCCACCCCCTTCAAGGCAAGGAGGGATGGAGGT...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR GCA 90 bp GCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAAACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: AVPEQRDVVPLLGSLGPETALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...TTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp TCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 2 (lower is better)
Translates to: SSNSCSMMVSTSGWALSTLSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...AGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp GCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 2 (lower is better)
Translates to: AAASWFTTRRSTSCLMERSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...CCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGAACATGAGAAAGTCTaGCGACTATGGGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCEHEKV*RLWGMG
Trigger: CCCCATCCCCCATAGTCGCCAGACTTTCTCATGTTC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 2 (lower is better)
Translates to: ACCAISSLATLEVMMKMARAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHINFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR CAA 90 bp CTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAATGCCCTaGGGGGACGGTGTCCAGACCCTCTGCTTTGTGACTAACATGCAG +
Preference number: 2 (lower is better)
Translates to: LAKVGLKHWLVCEMP*GDGVQTLCFVTNMQ
Trigger: CTGCATGTTAGTCACAAAGCAGAGGGTCTGGACACCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 90 bp TGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGGGTGATCAGGACTTCCAAAGAATGG +
Preference number: 2 (lower is better)
Translates to: CKAVQPLKLARLFSL*LKSSSRVIRTSKEW
Trigger: CCATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR TCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCTGGGAGGCAGGGCTTaGAGTGAGCCGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSLGGRA*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAGCCCTGCCTCCCAG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR GCA 90 bp TATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 2 (lower is better)
Translates to: YLDIPQVFGNTVTAHLQSISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...GCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp TCTGGGCTTTTGAGTAGCTGCTTGTCTGAGTCCTCCACCGTGATGCGCAAAGTACTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 2 (lower is better)
Translates to: SGLLSSCLSESSTVMRKVLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...TACTTTGCGCATCACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp AAGGGTGTGTGTCCCATTTCATTCCTCTGCAGGGGGTTGGCTCCTCCATCAAGCCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 2 (lower is better)
Translates to: KGVCPISFLCRGLAPPSSPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...GCTTGATGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGGACACACACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCTTGTTAGCAGGTTATaGGCCCACAACAAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLLVSRL*AHNKGA
Trigger: GGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGAACATGAGAAAGTCTaGCGACTATGGGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLEHEKV*RLWGMG
Trigger: CCCCATCCCCCATAGTCGCCAGACTTTCTCATGTTC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp TGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 2 (lower is better)
Translates to: CPDVQSASLAVLVDDLQTDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...CGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CAA 90 bp ACATCTGGATGGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: TSGWALSTSSKSTTA*GHCFNFLVSWPPSS
Trigger: TGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: QALLCLAKVGLKHWLVCERQLLS*RLVSRL
Trigger: TAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAGACTGCTGCTCAGTCTaGGTAGGGGAGGGTAATGAA +
Preference number: 2 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEDCCSV*VGEGNE
Trigger: TTCATTACCCTCCCCTACTCAGACTGAGCAGCAGTC...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR TCA 90 bp GCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 2 (lower is better)
Translates to: AAASWFTTRRSTSCLMERSRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...CCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp TATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 2 (lower is better)
Translates to: YLDIPQVFGNTVTAHLQSRSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...GCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR GCA 90 bp CTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 2 (lower is better)
Translates to: LLIGCCQLVHHTAFYLMFPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...AAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp TCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 2 (lower is better)
Translates to: SSNSCSMMVSTSGWALSTVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...AGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 2 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAACCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 2 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCTTGTTAGCAGGTTATaGGCCCACAACAAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSLVSRL*AHNKGA
Trigger: GGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGGTGGCAGTTCAGTCTaGTCCCTGTCTTCTTCCAGC +
Preference number: 2 (lower is better)
Translates to: RERGGYRLNCRTICTWASGGSSV*SLSSSS
Trigger: GCTGGAAGAAGACAGGGACCAGACTGAACTGCCACC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: ACCAISSLATLEVMMKMARPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR CAA 90 bp ATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGGGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: MLCLCLALLAQKFSS*LTSWMSSEWQKGRK
Trigger: CTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CAA 90 bp AAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTGATCAGGACTTCCAAAGAATGGATT +
Preference number: 2 (lower is better)
Translates to: KAVQPLKLARLFSLL*KSSSRVIRTSKEWI
Trigger: AATCCATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEARQLLS*RLVSRL
Trigger: TAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR TCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 2 (lower is better)
Translates to: ACCAISSLATLEVMMKMALLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp TATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 2 (lower is better)
Translates to: YLDIPQVFGNTVTAHLQSVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...GCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp GACGATCTCATTGATCCGTCCCAGAAACTCATCCCTCCGGAAGTGAGCTTTCAGCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 2 (lower is better)
Translates to: DDLIDPSQKLIPPEVSFQHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...CTGAAAGCTCACTTCCGGAGGGATGAGTTTCTGGGACGGATCAATGAGATCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR GCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAAATTGCAGAACTATCTaGACCTGGGCCTCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTNCRTI*TWASEL
Trigger: GAGCTCAGAGGCCCAGGTGCAGATAGTTCTGCAATT...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR GCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAGGTGTCCAGACCCTCTaGTTTGTGACTAACATGCAG +
Preference number: 2 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEGVQTL*FVTNMQ
Trigger: CTGCATGTTAGTCACAAAGCAGAGGGTCTGGACACC...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR GCA 90 bp TGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: CHLSGHPPGFRQYGYGSSPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...AGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR GCA 90 bp AATCAATGCCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGTTGCTGCTCTGCAAATaGCCTGCCAAAAGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: NQCLAAQWNMVVASPGGWLLLCK*PAKRGK
Trigger: CTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAA...CCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGGCATTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR-3UTR CCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 2 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGAACATGAGAAAGTCTaGCGACTATGGGGGATGGGG +
Preference number: 2 (lower is better)
Translates to: RERGGYRLNCRTICTWASEHEKV*RLWGMG
Trigger: CCCCATCCCCCATAGTCGCCAGACTTTCTCATGTTC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAGAACTATCTGCACCTaGGCCTCTGAGCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEARTICT*ASELFL
Trigger: GAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTAAGGCTGACGAAACATaGTCTGGCCTGACCCCAGGA +
Preference number: 2 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAKADET*SGLTPG
Trigger: TCCTGGGGTCAGGCCAGACCATGTTTCGTCAGCCTT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp CTTGCCACAGAGTTTTCCAACGGACAAAGGAAGAAGCTTTCTGCTTGGGGATGTAGTCCTGCCCTTCAGTaGCTGTGCCCTCCATCAAGC +
Preference number: 2 (lower is better)
Translates to: LATEFSNGQRKKLSAWGCSPALQ*LCPPSS
Trigger: GCTTGATGGAGGGCACAGCCACTGAAGGGCAGGACT...ACATCCCCAAGCAGAAAGCTTCTTCCTTTGTCCGTTGGAAAACTCTGTGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536297.1
3UTR-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGACTGCTGCTCAGTCTaGGTAGGGGAGGGTAATGAA +
Preference number: 2 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRADCCSV*VGEGNE
Trigger: TTCATTACCCTCCCCTACTCAGACTGAGCAGCAGTC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR TCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp GCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: AAASWFTTRRSTSCLMERSCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...CCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGTGATTTCAGCTCACTaGAACCTCCGCCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSVISAH*NLRLLG
Trigger: GCCCAGGAGGCGGAGGTTGCAGTGAGCTGAAATCAC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR GCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 2 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR GCA 90 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RLRLISKASCLSCSACCAFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...CGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR CCA 90 bp GACGATCTCATTGATCCGTCCCAGAAACTCATCCCTCCGGAAGTGAGCTTTCAGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 2 (lower is better)
Translates to: DDLIDPSQKLIPPEVSFQRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CTGAAAGCTCACTTCCGGAGGGATGAGTTTCTGGGACGGATCAATGAGATCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 2 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 2 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGGGAGCAGCAGCCCCTaGGGGGTAGACAGTGATCCA +
Preference number: 2 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLGSSSP*GVDSDP
Trigger: TGGATCACTGTCTACCCCTCAGGGGCTGCTGCTCCC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR TCA 90 bp TTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAGCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 2 (lower is better)
Translates to: FSAWGEGSSGLLSSCLSELLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp GTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCAGTCATCCTCTCGGGTaGTCAGGACTTCCAAAGAAT +
Preference number: 2 (lower is better)
Translates to: VTYLDIPQVFGNTVTAHLSHPLG*SGLPKN
Trigger: ATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACT...GAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTAGCTGTGTTCTTAGCTaGCATACTTCTGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPSCVLS*HTSELP
Trigger: AGGAAGCTCAGAAGTATGGCAGCTAAGAACACAGCT...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp GGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 2 (lower is better)
Translates to: GGHDEDGVLAINGLPFSIPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...GATGGAAAAGGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGAGGACTAGCAGAGGGTaGCAGTTCAGTCTGGTCCCT +
Preference number: 2 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLRTSRG*QFSLVP
Trigger: AGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp CTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 2 (lower is better)
Translates to: LIGCCQLVHHTAFYLMFDFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...ATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp GCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCACTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: ASLQSMVFPFPSVSRPSSLCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...TGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTA +
Preference number: 2 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLRQLLS*RLVSRL
Trigger: TAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTCACACCCTGGATTCTaGCTGCCTCATACCCACCAT +
Preference number: 2 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSSHPGF*LPHTHH
Trigger: ATGGTGGGTATGAGGCAGTCAGAATCCAGGGTGTGA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR TCA 90 bp CAGCCTGATGAAGCCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTGCTTGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 2 (lower is better)
Translates to: QPDEALFSIFVHIFGCLLGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...AAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR TCA 90 bp ATTGGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTTCCGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 2 (lower is better)
Translates to: IGGHDEDGVLAINGLPFSVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...GGAAAAGGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGAGAACTATCTGCACCTaGGCCTCTGAGCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLRTICT*ASELFL
Trigger: GAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CCA 90 bp TTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGCTTCCTCCGGATCGCTaGGAGAGAGCTCTTTATAAT +
Preference number: 2 (lower is better)
Translates to: FIKEHHSIGALLQLLGQLLPPDR*ERALYN
Trigger: ATTATAAAGAGCTCTCTCCCAGCGATCCGGAGGAAG...CAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642187.1
3UTR-3UTR GCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGGCTACTGTAGATGGTaGCCAAGGATGCACCAGGCC +
Preference number: 2 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLGYCRW*PRMHQA
Trigger: GGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCAAAGTCTGGCGACTATaGGGGATGGGGATCATTCTG +
Preference number: 2 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSKVWRL*GMGIIL
Trigger: CAGAATGATCCCCATCCCCCATAGTCGCCAGACTTT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CCA 90 bp TTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: FIKEHHSIGALLQLLGQLRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...CAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp TCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 2 (lower is better)
Translates to: SLQSMVFPFPSVSRPSSNRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...GTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp TCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 2 (lower is better)
Translates to: SSNSCSMMVSTSGWALSTFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...AGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR TCA 90 bp ACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTTGTCACTTATCTGGACATCCGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 2 (lower is better)
Translates to: TFSLKFFEMVILSLIWTSAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...GGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp ATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 2 (lower is better)
Translates to: IYLAVCLASSVFPIPDDPPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...GGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR GCA 90 bp TATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 2 (lower is better)
Translates to: YLDIPQVFGNTVTAHLQSIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...GCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR TCA 90 bp TTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 2 (lower is better)
Translates to: FIKEHHSIGALLQLLGQLSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...CAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCAGCTGTGTTCTTAGCTaGCATACTTCTGAGCTTCCT +
Preference number: 2 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSSCVLS*HTSELP
Trigger: AGGAAGCTCAGAAGTATGGCAGCTAAGAACACAGCT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR GCA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR GCA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCTTGTTAGCAGGTTATaGGCCCACAACAAAGGGGCC +
Preference number: 2 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLVSRL*AHNKGA
Trigger: GGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 90 bp ATAGGGCGAATCACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTaGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTA +
Preference number: 2 (lower is better)
Translates to: IGRITFSLKFFEMVI*SLIWTSPRFSAIRL
Trigger: TAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGTGATTCGCCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTTCCTAATTTTACAGTaGAGAAACCTGGCACACACC +
Preference number: 2 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSFLILQ*RNLAHT
Trigger: GGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CCA 90 bp CAGCCTGATGAAGCCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTGCTTGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 2 (lower is better)
Translates to: QPDEALFSIFVHIFGCLLASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...AAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCAACAAAATGCAATATaGGACCCTGGACCAGACAAA +
Preference number: 2 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLQQNAI*DPGPDK
Trigger: TTTGTCTGGTCCAGGGTCCCATATTGCATTTTGTTG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCTTCTGTGGTTGTCTTaGCAAAAATGCAGATCCTCA +
Preference number: 2 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLLWLS*QKCRSS
Trigger: TGAGGATCTGCATTTTTGCCAAGACAACCACAGAAG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 90 bp GACCCTGGACCAGACAAAGGACATCATCGGGAAAACTGGCAAAATTaGAATGTCCGTAGATTAGTTAGTAGTAGTTTATCAATGTTAACT +
Preference number: 2 (lower is better)
Translates to: DPGPDKGHHRENWQN*NVRRLVSSSLSMLT
Trigger: AGTTAACATTGATAAACTACTACTAACTAATCTACGGACATTCAAATTTTGCCAGTTTTCCCGATGATGTCCTTTGTCTGGTCCAGGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR GCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTTTGTCTTGGCAAAAATaGAGATCCTCAATCATATCA +
Preference number: 2 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLSWQK*RSSIIS
Trigger: TGATATGATTGAGGATCTGCATTTTTGCCAAGACAA...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CCA 90 bp CCTTCATCCTCATTGTCACTATTTCAGCAGTCTGTTGACTATCTCAAATTAGAAAGAGACATGTCAATGTaGACTGATCCATTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: PSSSLSLFQQSVDYLKLERDMSM*TDPFFS
Trigger: GGAAAAGAATGGATCAGTCCACATTGACATGTCTCT...TTCTAATTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR GCA 72 bp GCGCTCTCCTGGCCAATGATGTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGCCGCTCCTCAGCCTCA +
Preference number: 3 (lower is better)
Translates to: ALSWPMMCSFSR*SRGKRRRSSAS
Trigger: TGAGGCTGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR GCA 72 bp CCCACTGTGGCGATGGCGCTCTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGC +
Preference number: 3 (lower is better)
Translates to: PTVAMALSWPMM*SFSRCSRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR TCA 72 bp CAGCACCCACTGTGGCGATGGCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCTGCTCCAGGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: QHPLWRWRSPGQ*CAPLVAAPGGS
Trigger: GCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR GCA 72 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACA +
Preference number: 3 (lower is better)
Translates to: RLRLISKASCLS*SACCAISSLAT
Trigger: TGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 72 bp CGGATCGCAGCACCCACTGTGGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTTAGTCGCTGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: RIAAPTVAMALS*PMMCSFSRCSR
Trigger: CCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CAA 90 bp TCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 3 (lower is better)
Translates to: SFSRCSRGKRRRSSASRFKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...GAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CAA 90 bp CCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 3 (lower is better)
Translates to: PASAAARAVRSRRWPHWRSSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...CCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 72 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTGGCCACATTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: LISKASCLSCSA*CAISSLATLEV
Trigger: GACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 72 bp ATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGC +
Preference number: 3 (lower is better)
Translates to: ISRRSLGRRFSA*GEGSSGLLSSC
Trigger: GCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 72 bp CAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGCCACCTCGTGTCGCTC +
Preference number: 3 (lower is better)
Translates to: QLATLLMANVAW*RPNKLGHLVSL
Trigger: GAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR CCA 72 bp GGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTaGTGGAGACCCAATAAACTTGGCCACCTCGTGTCG +
Preference number: 3 (lower is better)
Translates to: GQLATLLMANVA*WRPNKLGHLVS
Trigger: CGACACGAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR CAA 90 bp ACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 3 (lower is better)
Translates to: TSRSQSSVMLCLCLALLAHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...GGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 72 bp CTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCACATTGGAGGTCATGAT +
Preference number: 3 (lower is better)
Translates to: LQSFLPQLQRVL*DLVAGHIGGHD
Trigger: ATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 72 bp TCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCG +
Preference number: 3 (lower is better)
Translates to: SAIRLRLISKAS*LSCSACCAISS
Trigger: CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 3 (lower is better)
Translates to: ACCAISSLATLEVMMKMAHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp TCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: SFSRCSRGKRRRSSASRFTSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...GAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CAA 90 bp TTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGACGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 3 (lower is better)
Translates to: FLPQLQRVLCDLVAGHIGRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...TCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CAA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 3 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAAGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR CAA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGGGAAGGTAAGTCAGTaGCCATGCCACAGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCGKVSQ*PCHSQG
Trigger: CCCTTGGCTGTGGCATGGCAACTGACTTACCTTCCC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp TCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: SMISRRSLGRRFSAWGEGMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...GCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: LISKASCLSCSACCAISSMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR TCA 72 bp GGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: GCPVCESCCPCR*SPDAAWGGASQ
Trigger: CTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 72 bp CCTCCACTCCCAGTGGAGCCATTCTGGGGACTGAGTTaGATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTG +
Preference number: 3 (lower is better)
Translates to: PPLPVEPFWGLS*MRTSRGWQFSL
Trigger: CAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCCCCAGAATGGCTCCACTGGGAGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR CCA 72 bp CTGCTAGATGGTGTTGCACACCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTC +
Preference number: 3 (lower is better)
Translates to: LLDGVAHLLRVQ*CPDVQSASLAV
Trigger: GACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGAGAAGGTGTGCAACACCATCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGGGAAGGTAAGTCAGTaGCCATGCCACAGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLGKVSQ*PCHSQG
Trigger: CCCTTGGCTGTGGCATGGCAACTGACTTACCTTCCC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 3 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAACTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 3 (lower is better)
Translates to: LQRVLCDLVAGHIGGHDELLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...TTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 3 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR TCA 72 bp TGCACCAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTaGAACATTGGCTGGTCTGTGAAATGCCCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: CTRPYCAWLRWA*NIGWSVKCPWG
Trigger: CCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp GGTGGACTGCTTATCAGCAGTGGCTACTGTAGATGGTaGCCAAGGATGCACCAGGCCTTACTGTGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: GGLLISSGYCRW*PRMHQALLCLA
Trigger: AGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCCACTGCTGATAAGCAGTCCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp CTAGATGGTGTTGCACACCTTCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTT +
Preference number: 3 (lower is better)
Translates to: LDGVAHLLRVQW*PDVQSASLAVL
Trigger: AAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGAGAAGGTGTGCAACACCATCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 72 bp TGGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATaGCCTGCCAAAAGGGGAAAGTCGCAGCCCGGCAGC +
Preference number: 3 (lower is better)
Translates to: WKSGFPTLLLCK*PAKRGKSQPGS
Trigger: GCTGCCGGGCTGCGACTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR CCA 72 bp GCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTaGCTGGTCTGTGAAATGCCCTTGGGGGACGGTGTC +
Preference number: 3 (lower is better)
Translates to: ALLCLAKVGLKH*LVCEMPLGDGV
Trigger: GACACCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp GTGGGTGGACTGCTTATCAGCAGTGGCTACTGTAGATaGTGCCCAAGGATGCACCAGGCCTTACTGTGCCTG +
Preference number: 3 (lower is better)
Translates to: VGGLLISSGYCR*CPRMHQALLCL
Trigger: CAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCCACTGCTGATAAGCAGTCCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAGGGAAGGTAAGTCAGTaGCCATGCCACAGCCAAGGG +
Preference number: 3 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTGKVSQ*PCHSQG
Trigger: CCCTTGGCTGTGGCATGGCAACTGACTTACCTTCCC...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp ACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: TAHLQSFLPQLQRVLCDLTSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...GAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp TTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGACAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 3 (lower is better)
Translates to: FLPQLQRVLCDLVAGHIGQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...TCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CCTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: PAHRLLPAGSPHGVLPHVMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...AACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp TGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: CPDVQSASLAVLVDDLQTGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...CGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp GCCACCTCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 3 (lower is better)
Translates to: ATSCRSWNSDMSSLMKPFLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...AAAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR-3UTR CAA 90 bp TTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: LSMISRRSLGRRFSAWGESLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...CTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR TCA 72 bp CCGAGTGGCAGAAGGGGAGGAAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCATCCCTCCGGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: PSGRRGGSRRSH*SVPETHPSGSE
Trigger: CTCACTTCCGGAGGGATGAGTTTCTGGGACGGATCAATGAGATCGTCTACTTCCTCCCCTTCTGCCACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR GCA 72 bp TGTAGATGGTGCCCAAGGATGCACCAGGCCTTACTGTaGCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: CRWCPRMHQALL*LAKVGLKHWLV
Trigger: GACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp TTATCAGCAGTGGCTACTGTAGATGGTGCCCAAGGATaGACCAGGCCTTACTGTGCCTGGCTAAGGTGGGCT +
Preference number: 3 (lower is better)
Translates to: LSAVATVDGAQG*TRPYCAWLRWA
Trigger: AGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCCACTGCTGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp TTCTGGGGACTGAGTTGCATGAGGACTAGCAGAGGGTaGCAGTTCAGTCTGGTCCCTGTCTTCTTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: FWGLSCMRTSRG*QFSLVPVFFQP
Trigger: TGGCTGGAAGAAGACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCCCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 3 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: ACCAISSLATLEVMMKMATSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp ACATCTGCCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: TSATSRSQSSVMLCLCLACFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...AGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR TCA 72 bp CTTGCCTTGAAGGGGGTGGAAAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTATGGGCCCACAACAAA +
Preference number: 3 (lower is better)
Translates to: LALKGVERQLLS*RLVSRLWAHNK
Trigger: TTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCTTTCCACCCCCTTCAAGGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR TCA 72 bp CAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTaGGCTCTTCCTCCACTCCCAGTGGAGCCATTCTGG +
Preference number: 3 (lower is better)
Translates to: QTKLQNYLHLGL*ALPPLPVEPFW
Trigger: CCAGAATGGCTCCACTGGGAGTGGAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR TCA 72 bp CCCTTCAGTGGCTGTGCCCTCCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAGCAAGAACAGCATAGT +
Preference number: 3 (lower is better)
Translates to: PFSGCALHQAAP*QCGSHQQEQHS
Trigger: ACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGGCACAGCCACTGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
3UTR TCA 72 bp TCTGCAGGGGGTTGGCTCCTCCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAGCAAGAACAGCATAGT +
Preference number: 3 (lower is better)
Translates to: SAGGWLLHQAAP*QCGSHQQEQHS
Trigger: ACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGAGCCAACCCCCTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR CCA 72 bp GGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: GPCLLHQRAPQH*GTASTSWSAGH
Trigger: GTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CCA 72 bp GAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTaGATTCCCAACATTGCTGCTCTGCAAATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: EYGSGIPWGMEE*IPNIAALQMPC
Trigger: GCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR-3UTR CAA 90 bp TGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 3 (lower is better)
Translates to: CHLSGHPPGFRQYGYGSSHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...AGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 3 (lower is better)
Translates to: LISKASCLSCSACCAISSFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp GTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: VFGNTVTAHLQSFLPQLQFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...CTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp TATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 3 (lower is better)
Translates to: YLDIPQVFGNTVTAHLQSRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...GCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 3 (lower is better)
Translates to: HPPGFRQYGYGSSPKLPALKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...GGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535477.6
3UTR TCA 72 bp GATCCAAGCATCTGCTGGAGCTCACACCCTGGATTCTaGCTGCCTCATACCCACCATACTGTTAGGACATGC +
Preference number: 3 (lower is better)
Translates to: DPSICWSSHPGF*LPHTHHTVRTC
Trigger: GCATGTCCTAACAGTATGGTGGGTATGAGGCAGTCAGAATCCAGGGTGTGAGCTCCAGCAGATGCTTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp CAAGCATCTGCTGGAGCTCACACCCTGGATTCTGACTaGCTCATACCCACCATACTGTTAGGACATGCTTCC +
Preference number: 3 (lower is better)
Translates to: QASAGAHTLDSD*LIPTILLGHAS
Trigger: GGAAGCATGTCCTAACAGTATGGTGGGTATGAGGCAGTCAGAATCCAGGGTGTGAGCTCCAGCAGATGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp TCTACTTCATCAAAGAGCACCACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGCTGGCCACCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: STSSKSTTALGH*FNFLVSWPPSS
Trigger: TGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR-3UTR CAA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATTCCTCCTTCAGGTTTaGGGGCTGAGAAGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPFLLQV*GLRRGL
Trigger: AAGACCCCTTCTCAGCCCCAAAACCTGAAGGAGGAA...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCCATCCCTCCTTGCCTaGAAGGGGGTGGAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLPSLLA*KGVERQ
Trigger: CTGCCTTTCCACCCCCTTCAAGGCAAGGAGGGATGG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 3 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTTTCCTCCTTCAGGTTTaGGGGCTGAGAAGGGGTCTT +
Preference number: 3 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAFLLQV*GLRRGL
Trigger: AAGACCCCTTCTCAGCCCCAAAACCTGAAGGAGGAA...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR-3UTR CAA 90 bp CTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: LIGCCQLVHHTAFYLMFDMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...ATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 3 (lower is better)
Translates to: PPGFRQYGYGSSPKLPASKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...TGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR TCA 72 bp CATGTTGGTCAGGATGGTCTCAATCTCTTGATCTCGTaGTCTGCCCCTACATGGCCTCCAGAGTGTTGGGAT +
Preference number: 3 (lower is better)
Translates to: HVGQDGLNLLIS*SAPTWPPECWD
Trigger: ATCCCAACACTCTGGAGGCCATGTAGGGGCAGATCACGAGATCAAGAGATTGAGACCATCCTGACCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp GCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATaGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAA +
Preference number: 3 (lower is better)
Translates to: AQWNMVVASPGG*KSGFPTLLLCK
Trigger: TTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR-3UTR CAA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTGCGATGTTGGTCTTTaGAAGGAGGCCCCCACAGAG +
Preference number: 3 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSCDVGL*KEAPTE
Trigger: CTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CAA 90 bp TTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAGCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: FSAWGEGSSGLLSSCLSERITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 3 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR TCA 72 bp AACATCTGTCATATGCCTGCACTGTGCCAGGTTCTGTaGATGGCTGAACAGCTTGGCATCTGCCCTCTTAGA +
Preference number: 3 (lower is better)
Translates to: NICHMPALCQVL*MAEQLGICPLR
Trigger: TCTAAGAGGGCAGATGCCAAGCTGTTCAGCCATTCACAGAACCTGGCACAGTGCAGGCATATGACAGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp TCTGTCATATGCCTGCACTGTGCCAGGTTCTGTGAATaGCTGAACAGCTTGGCATCTGCCCTCTTAGAACTT +
Preference number: 3 (lower is better)
Translates to: SVICLHCARFCE*LNSLASALLEL
Trigger: AAGTTCTAAGAGGGCAGATGCCAAGCTGTTCAGCCATTCACAGAACCTGGCACAGTGCAGGCATATGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp CACAGAACAAGTAGGACAAGTGAGCTGAGCCTGGGATaGTATGGAAGTAAAAGATATGGGTCCAACACCACC +
Preference number: 3 (lower is better)
Translates to: HRTSRTSELSLG*YGSKRYGSNTT
Trigger: GGTGGTGTTGGACCCATATCTTTTACTTCCATAGCATCCCAGGCTCAGCTCACTTGTCCTACTTGTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp AGGACATGCTTCCATTACCCAAGGGACTTTGATTCCTaGCCCCATTCTCTGCTTCCTGAAAGACTAGCTAAC +
Preference number: 3 (lower is better)
Translates to: RTCFHYPRDFDS*PHSLLPERLAN
Trigger: GTTAGCTAGTCTTTCAGGAAGCAGAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAATGGAAGCATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR-3UTR CAA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp TGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 3 (lower is better)
Translates to: CHLSGHPPGFRQYGYGSSFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...AGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR-3UTR CAA 90 bp GGCACGGCAGAGATAATGTCCTTGGTGAACACTCCAATTCTTAGCTACAAATGTTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 3 (lower is better)
Translates to: GTAEIMSLVNTPILSYKCLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...ACATTTGTAGCTAAGAATTGGAGTGTTCACCAAGGACATTATCTCTGCCGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
3UTR TCA 72 bp AGCAAACAAACAATACTTTTCTGTTCCAGAGCCCACTaGGAAGATCTGCACTTGCTGCAGGTCCCATCCACT +
Preference number: 3 (lower is better)
Translates to: SKQTILFCSRAH*EDLHLLQVPST
Trigger: AGTGGATGGGACCTGCAGCAAGTGCAGATCTTCTCAGTGGGCTCTGGAACAGAAAAGTATTGTTTGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp CAGGCTGACAGAGATGAAGGAAACACCACAACAAAATaGAATATGGGACCCTGGACCAGACAAAGGACATCA +
Preference number: 3 (lower is better)
Translates to: QADRDEGNTTTK*NMGPWTRQRTS
Trigger: TGATGTCCTTTGTCTGGTCCAGGGTCCCATATTGCATTTTGTTGTGGTGTTTCCTTCATCTCTGTCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp GAAGGAAACACCACAACAAAATGCAATATGGGACCCTaGACCAGACAAAGGACATCATCGGGAAAACTGGCA +
Preference number: 3 (lower is better)
Translates to: EGNTTTKCNMGP*TRQRTSSGKLA
Trigger: TGCCAGTTTTCCCGATGATGTCCTTTGTCTGGTCCAGGGTCCCATATTGCATTTTGTTGTGGTGTTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 72 bp AGAATGACTGATGCCAGGGCTGAGATAGGGAAAATGTaGGGAAGCCTGAAACATCTTGTGGTGCCAGAAAAT +
Preference number: 3 (lower is better)
Translates to: RMTDARAEIGKM*GSLKHLVVPEN
Trigger: ATTTTCTGGCACCACAAGATGTTTCAGGCTTCCTCACATTTTCCCTATCTCAGCCCTGGCATCAGTCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp ATGTCCAGCCTGATGAAGCCCTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGCTTGGCCAGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: MSSLMKPFLASL*IYLAVCLASSV
Trigger: AACAGAGCTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAGGCTGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR CCA 72 bp GTCTCACCTTGCTGCATTGTCTCAGAGCTCAAATCCTaGCCACAGCAACATGGGACAAATAAAAATATGCTG +
Preference number: 3 (lower is better)
Translates to: VSPCCIVSELKS*PQQHGTNKNML
Trigger: CAGCATATTTTTATTTGTCCCATGTTGCTGTGGCCAGGATTTGAGCTCTGAGACAATGCAGCAAGGTGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp TGGGAAATCCTTCCCATGATCAGAGACATGTCAATGTaGACTGATCCATTCTTTTCCGTTATGAGCTCCCCA +
Preference number: 3 (lower is better)
Translates to: WEILPMIRDMSM*TDPFFSVMSSP
Trigger: TGGGGAGCTCATAACGGAAAAGAATGGATCAGTCCACATTGACATGTCTCTGATCATGGGAAGGATTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR-3UTR CAA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGTATCACTTCTGTGGTaGTCTTGGCAAAAATGCAGA +
Preference number: 3 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSVSLLW*SWQKCR
Trigger: TCTGCATTTTTGCCAAGACAACCACAGAAGTGATAC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 72 bp AGTGATGAAGACACAGAACAAGTAGGACAAGTGAGCTaGGCCTGGGATGCTATGGAAGTAAAAGATATGGGT +
Preference number: 3 (lower is better)
Translates to: SDEDTEQVGQVS*AWDAMEVKDMG
Trigger: ACCCATATCTTTTACTTCCATAGCATCCCAGGCTCAGCTCACTTGTCCTACTTGTTCTGTGTCTTCATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR TCA 72 bp AATCCTTCCCATGATCAGAGACATGTCAATGTGGACTaGTCCATTCTTTTCCGTTATGAGCTCCCCATCAAG +
Preference number: 3 (lower is better)
Translates to: NPSHDQRHVNVD*SILFRYELPIK
Trigger: CTTGATGGGGAGCTCATAACGGAAAAGAATGGATCAGTCCACATTGACATGTCTCTGATCATGGGAAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR TCA 72 bp ACATGTCAATGTGGACTGATCCATTCTTTTCCGTTATaGGCTCCCCATCAAGGAAACATTGAGAGAGAGAGT +
Preference number: 3 (lower is better)
Translates to: TCQCGLIHSFPL*APHQGNIERES
Trigger: ACTCTCTCTCTCAATGTTTCCTTGATGGGGAGCTCATAACGGAAAAGAATGGATCAGTCCACATTGACATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CCA 72 bp GACCCTGGACCAGACAAAGGACATCATCGGGAAAACTaGCAAAATTTGAATGTCCGTAGATTAGTTAGTAGT +
Preference number: 3 (lower is better)
Translates to: DPGPDKGHHREN*QNLNVRRLVSS
Trigger: ACTACTAACTAATCTACGGACATTCAAATTTTGCCAGTTTTCCCGATGATGTCCTTTGTCTGGTCCAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR GCA 72 bp CCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTTCCTATTCCAGATGAT +
Preference number: 3 (lower is better)
Translates to: PFLASLCIYLAV*LASSVFPIPDD
Trigger: ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
3UTR CCA 72 bp CGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTaGCCAAATCTGAGCCAATTTGAGCAACCAAATAAA +
Preference number: 3 (lower is better)
Translates to: RNNTVPTSMSSH*PNLSQFEQPNK
Trigger: TTTATTTGGTTGCTCAAATTGGCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp CAGGAGTATATATTCTGTCCAGATCTTGGTTTCCAGTaGCATCAAGAAACAACTTGGTTTCTAAGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: QEYIFCPDLGFQ*HQETTWFLSSF
Trigger: AAAGGAACTTAGAAACCAAGTTGTTTCTTGATGCCACTGGAAACCAAGATCTGGACAGAATATATACTCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CCA 72 bp ACTAAGAATAGCACAGTATCACTTCTGTGGTTGTCTTaGCAAAAATGCAGATCCTCAATCATATCATGTAAA +
Preference number: 3 (lower is better)
Translates to: TKNSTVSLLWLS*QKCRSSIISCK
Trigger: TTTACATGATATGATTGAGGATCTGCATTTTTGCCAAGACAACCACAGAAGTGATACTGTGCTATTCTTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCCTGCCAAAAGGGGAAAGTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PCQKGKVAARQPFAVANRCPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...CCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGACTTTCCCCTTTTGGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVCPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCGGCCAGGGCGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRPGRT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp TCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCTCGCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SKASCLSCSACCAISSLASQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGA...GGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR TCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTTGCCGGCCCCTGTGCTaGCCACGTCCAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGCRPLC*PRPTWL
Trigger: CAGCCATGTTGGACGTGGTCAGCACAGGGGCCGGCA...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCGCTACCCTCAGCCACTaGGGCTCCCCGAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVATLSH*GSPRLP
Trigger: TGGGAGTCTCGGGGAGCCGCAGTGGCTGAGGGTAGC...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVACPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCGGCCAGGGCGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRPGRT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTCCTGGCCCTCGGCCAGGGCGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALPSGLLVSSLLTPFPGPRPGRT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCG...AGGGCCAGGAAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGGAGCGTTGGGGACCTaGGCAGCCGGAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAGALGT*AAGGVA
Trigger: GGCTACTCCTCCGGCTGCTCAGGTCCCCAACGCTCC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR TCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTAGTCATCCTCTCGGGTaGTCAGGACGCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGSHPLG*SGRQRG
Trigger: TCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACT...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp TTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FGNTVTAHLQSFLPQLQRCPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...GCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCGGCCAGGGCGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLRPGRT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGCGGCCAGGGCGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MPGSSMEYGSGIPWGMEERPGRT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCG...CTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp TGCTGCTCTGCAAATGCCCTGCCAAAAGGGGAAAGTCGCAGCCCGGCAGCCCTTATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: CCSANALPKGESRSPAALMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...AAGGGCTGCCGGGCTGCGACTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp TCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCCGAACAGGGTGGAGTTaGGCACTACCTCACGGGAGA +
Preference number: 4 (lower is better)
Translates to: SFSRCSRGKRRRSSASRFRTGWS*ALPHGR
Trigger: TCTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCG...GAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGATGGCCCCGGAGCGTTaGGGACCTGAGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVMAPER*GPEQPE
Trigger: CTCCGGCTGCTCAGGTCCCCAACGCTCCGGGGCCAT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ACCAISSLATLEVMMKMAPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp TCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SPKLPASAAARAVRSRRWRRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...CCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGGAGCGTTGGGGACCTaGGCAGCCGGAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQGALGT*AAGGVA
Trigger: GGCTACTCCTCCGGCTGCTCAGGTCCCCAACGCTCC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR TCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGCCGGCCCCTGTGCTaGCCACGTCCAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCRPLC*PRPTWL
Trigger: CAGCCATGTTGGACGTGGTCAGCACAGGGGCCGGCA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCTACCCTCAGCCACTaGGGCTCCCCGAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRATLSH*GSPRLP
Trigger: TGGGAGTCTCGGGGAGCCGCAGTGGCTGAGGGTAGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAAGCTACCCTCAGCCACTaGGGCTCCCCGAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: AVPEQRDVVPLLGSLGPEATLSH*GSPRLP
Trigger: TGGGAGTCTCGGGGAGCCGCAGTGGCTGAGGGTAGC...TTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTACCCTCAGCCACTaGGGCTCCCCGAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAATLSH*GSPRLP
Trigger: TGGGAGTCTCGGGGAGCCGCAGTGGCTGAGGGTAGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCGGCCAGGGCGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLRPGRT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCG...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWCDVPA*TVLSPI
Trigger: GATGGGGGACAGGACGGTGCAAGCCGGCACATCACA...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AAASWFTTRRSTSCLMERLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...CCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp TCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: SGCSGARMSSLRVLLSLSASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...CGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp TTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: LSMISRRSLGRRFSAWGELRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...CTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTATGGCCCCGGAGCGTTaGGGACCTGAGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCMAPER*GPEQPE
Trigger: CTCCGGCTGCTCAGGTCCCCAACGCTCCGGGGCCAT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCATGGCCCCGGAGCGTTaGGGACCTGAGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVMAPER*GPEQPE
Trigger: CTCCGGCTGCTCAGGTCCCCAACGCTCCGGGGCCAT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCGCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCGCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCACGCCGCGAACAGGGTaGAGTTGCGCACTACCTCAC +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVTPRTG*SCALPH
Trigger: GTGAGGTAGTGCGCAACTCCACCCTGTTCGCGGCGT...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCCCCCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSPQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGGGG...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642187.1
3UTR CAA 72 bp GGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GARMSSLRVLLS*SMISRRSLGRR
Trigger: GCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGTCATCCTCTCGGGTaGTCAGGACGCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASHPLG*SGRQRG
Trigger: TCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCCCCAGGACGTGGGGTaGGGAGGAACACTGGGCATA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVPQDVG*GGTLGI
Trigger: TATGCCCAGTGTTCCTCCTCACCCCACGTCCTGGGG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCCCCAGGACGTGGGGTaGGGAGGAACACTGGGCATA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRPQDVG*GGTLGI
Trigger: TATGCCCAGTGTTCCTCCTCACCCCACGTCCTGGGG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTAGGCAGGGCTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCRQGLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAGCCCTGCCT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCACTCCATCCTGGGTaGCAGAGCGGGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRALHPG*QSGTPS
Trigger: AGACGGAGTCCCGCTCTGTCACCCAGGATGGAGTGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCAGCCTCCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVSLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCTCAGCTACTCGGGAGGCT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKCPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSCPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWGCHHE*CPAKSV
Trigger: CACAGACTTGGCTGGACAGCACTCATGGTGGCAGCC...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVCSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVACSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: SGCSGARMSSLRVLLSLSHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: LISKASCLSCSACCAISSHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCACGTCCAACATGGCTaGCGCGGCGCGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRHVQHG*RGAFED
Trigger: GTCTTCGAACGCGCCGCGGCAGCCATGTTGGACGTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATTGACATCTGCACATaGCCAGTCCGGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLRLISKASCLSCSACCAIDICT*PVRPCW
Trigger: CCAGCAGGGCCGGACTGGGCATGTGCAGATGTCAAT...CGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp TGGCCAATGATGTGCTCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCCTTTGCATTGACATCTaGACATGCCCAGTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: WPMMCSFSRCSRGKRRRSLCIDI*TCPVRP
Trigger: GGGCCGGACTGGGCATGTGCAGATGTCAATGCAAAG...GGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCGCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVARRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
3UTR CAA 72 bp GTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VLLSLSMISRRS*GRRFSAWGEGS
Trigger: ACTGCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGGAGCGTTGGGGACCTaGGCAGCCGGAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPGALGT*AAGGVA
Trigger: GGCTACTCCTCCGGCTGCTCAGGTCCCCAACGCTCC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTGTCCTAGCCATCTCCTaGACTCCAGGGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSVLAIS*TPGHLS
Trigger: GGACAAGTGCCCTGGAGTTCAGGAGATGGCTAGGAC...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGTCATCCTCTCGGGTaGTCAGGACGCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSHPLG*SGRQRG
Trigger: TCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVARPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: RLRLISKASCLSCSACCARSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...CGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp TCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: SKASCLSCSACCAISSLAVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...GGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTCTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAALSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTCCCCAGGACGTGGGGTaGGGAGGAACACTGGGCATA +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCPQDVG*GGTLGI
Trigger: TATGCCCAGTGTTCCTCCTCACCCCACGTCCTGGGG...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGGCAGGAGAATGGCGTaGACCTGGGAGGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSGRRMA*TWEAGL
Trigger: AAGCCCTGCCTCCCAGGTTCACGCCATTCTCCTGCC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGCACTCCATCCTGGGTaGCAGAGCGGGACTCCGTCT +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSALHPG*QSGTPS
Trigger: AGACGGAGTCCCGCTCTGTCACCCAGGATGGAGTGC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGCAGGATGACCACATATaGGCAGCCATGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWQDDHI*AAMHLP
Trigger: GGGAAGGTGCATGGCTGCTCATATGTGGTCATCCTG...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEACPVRP*WGPRSS
Trigger: GCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCDVPA*TVLSPI
Trigger: GATGGGGGACAGGACGGTGCAAGCCGGCACATCACA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVCDVPA*TVLSPI
Trigger: GATGGGGGACAGGACGGTGCAAGCCGGCACATCACA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR GCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGHWFVM*RLAPSC
Trigger: ACAGGACGGTGCAAGCCGGCACATCACAAACCAGTG...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQCSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCLSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PASAAARAVRSRRWPHWRSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...CCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: CPDVQSASLAVLVDDLQTLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...CGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCCTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TAHLQSFLPQLQRVLCDLQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...GAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTCCTGGCCCTGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: ALPSGLLVSSLLTPFPGPEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...AGGGCCAGGAAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAACCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTGGGCTGCATCCTTGTTaGACGGACTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGGLHPC*TDSCCS
Trigger: GCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCC...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp TCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGTCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SGCSGARMSSLRVLLSLSSSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...CGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TVTAHLQSFLPQLQRVLCTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...GCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCCGCTGCTTCTCTTGGTACTTACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEAAPLLSLTLPLLLLVLTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...AAGTACCAAGAGAAGCAGCGGAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSRRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ACATCTGCCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: TSATSRSQSSVMLCLCLASPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...AGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCCTCTGTCCCCACCTGTaGTCTCTCCGATTACCCAGA +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVLCPHL*SLRLPR
Trigger: TCTGGGTAATCGGAGAGACCACAGGTGGGGACAGAG...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGTCCTAGCCATCTCCTaGACTCCAGGGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVVLAIS*TPGHLS
Trigger: GGACAAGTGCCCTGGAGTTCAGGAGATGGCTAGGAC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGTCCTAGCCATCTCCTaGACTCCAGGGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAVLAIS*TPGHLS
Trigger: GGACAAGTGCCCTGGAGTTCAGGAGATGGCTAGGAC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR TCA 90 bp CTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCGTGCAGCCAGTCATCCTCTCGGGTaGTCAGGACGCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LDSAVVISKNSIVQGRAASHPLG*SGRQRG
Trigger: TCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACT...GGCTGCACGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR TCA 90 bp CCTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PAHRLLPAGSPHGVLPHVRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...AACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TSRSQSSVMLCLCLALLACCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...GGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp ACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TAHLQSFLPQLQRVLCDLAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...GAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCGATGTTGGTCTTTTaGAGGAGGCCCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVAMLVF*RRPPQS
Trigger: GCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGGCAGGAGAATGGCGTaGACCTGGGAGGCAGGGCTT +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLGRRMA*TWEAGL
Trigger: AAGCCCTGCCTCCCAGGTTCACGCCATTCTCCTGCC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAAGCCTCCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCESLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCTCAGCTACTCGGGAGGCT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAACTCCAGACCTAGGTaGTCCACCTGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSNSRPR*STCLGL
Trigger: GAGGCCCAGGCAGGTGGATCACCTAGGTCTGGAGTT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTTCTGACAACAGCCTaGGGGGCCATTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLLTTA*GAIQRR
Trigger: CCTCCTCTGAATGGCCCCTCAGGCTGTTGTCAGAAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR TCA 90 bp AAAGGGGAAAGTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTGATTCCAGCAGTAGCCAACAGGTaGTTCCAGGGTCAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KGESRSPAALRSSQQVIPAVANR*FQGQQG
Trigger: CCCTTGCTGACCCTGGAATCACCTGTTGGCTACTGC...TGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGACTTTCCCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR TCA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCGAGAGAGTGGCAGGATaGCCACATATGAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVERVAG*PHMSSH
Trigger: ATGGCTGCTCATATGTGGTCATCCTGCCACTCTCTC...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGCAGCATCTTGACAGCTaGTTCGATAACCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWQHLDS*FDNPVV
Trigger: CACCACGGGGTTATCGAAGCAGCTGTCAAGATGCTG...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGCTACCCTCAGCCACTaGGGCTCCCCGAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPATLSH*GSPRLP
Trigger: TGGGAGTCTCGGGGAGCCGCAGTGGCTGAGGGTAGC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGCHHE*CPAKSV
Trigger: CACAGACTTGGCTGGACAGCACTCATGGTGGCAGCC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTTGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCCDVPA*TVLSPI
Trigger: GATGGGGGACAGGACGGTGCAAGCCGGCACATCACA...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR GCA 90 bp ACTGCTGCCACATCCACAAGTAGTCCTGCCCTTCAGTGGCTGTGCCCTCCATCATGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: TAATSTSSPALQWLCPPSCDVPA*TVLSPI
Trigger: GATGGGGGACAGGACGGTGCAAGCCGGCACATCACA...TGATGGAGGGCACAGCCACTGAAGGGCAGGACTACTTGTGGATGTGGCAGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQCDVPA*TVLSPI
Trigger: GATGGGGGACAGGACGGTGCAAGCCGGCACATCACA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR GCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GACGAGTTGGATGAGCTCCGAGTGGCAGAAGGGGAGGAAGTAGACGATCTCATTCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: DELDELRVAEGEEVDDLILQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...AATGAGATCGTCTACTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAACTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp TTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: FRQYGYGSSPKLPASAAALSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...CGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTCTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHILSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: AAASWFTTRRSTSCLMERISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...CCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGATGGTGCCCAAGGATaGACCAGGCCTTACTGTGCC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVDGAQG*TRPYCA
Trigger: GGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGTGGTGGTGGGCACCTaGAATCCCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAVVVGT*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTGCAGGTGCCCACCACCAC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCGAACAGGGTGGAGTTaGGCACTACCTCACGGGAGA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRTGWS*ALPHGR
Trigger: TCTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000543042.6
CDS-3UTR GCA 90 bp TCCACAAGTAGTCCTGCCCTTCAGTGGCTGTGCCCTCCATCAAGCAGCTCCTTGGCCCTTCAGTGGCTGTaGCCTCCATCAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STSSPALQWLCPPSSSSLALQWL*PPSSSS
Trigger: GGAGCTGCTTGATGGAGGGCACAGCCACTGAAGGGC...CAAGGAGCTGCTTGATGGAGGGCACAGCCACTGAAGGGCAGGACTACTTGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR GCA 90 bp CGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTGATTCCAGGGTCAGCAAGGCCCGTACTCCTGTACTaGAGCAGAATGAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RSPAALRSSQQVIPGSARPVLLY*SRMKQS
Trigger: GCTTTGCTTCATTCTGCTGCAGTACAGGAGTACGGG...CCTTGCTGACCCTGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTACATATGAGCAGCCATaGACCTTCCCTGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGTYEQP*TFPVST
Trigger: CGTGGACACAGGGAAGGTGCATGGCTGCTCATATGT...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CAATGCCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: QCLAAQWNMVVASPGGWKEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...CTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGGCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTCCCAACATTGCTCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EYGSGIPWGMEEWIPNIAPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...AGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTCGCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLSQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ACCAISSLATLEVMMKMATSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CCA 90 bp TTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: FLPQLQRVLCDLVAGHIGANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...TCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCCGCTGCTTCTCTTGGTACTTAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GEAAPLLSLTLPLLLLVLRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...AAGTACCAAGAGAAGCAGCGGAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAALLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTGAGGCTGACTCCATaGCCATGTGGGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLRLTP*PCGQRS
Trigger: TGACCTCTGCCCACATGGCCATGGAGTCAGCCTCAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCCTGTGGGGGAAGGTaGGTGGACTGCTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAACGGR*VDCLSA
Trigger: TGCTGATAAGCAGTCCACCCACCTTCCCCCACAGGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGACGCCGCGAACAGGGTaGAGTTGCGCACTACCTCAC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQTPRTG*SCALPH
Trigger: GTGAGGTAGTGCGCAACTCCACCCTGTTCGCGGCGT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000543042.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTGTCCACTGGTTTGTaGTGTGCCGGCTTGCACCGT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLSTGL*CAGLHR
Trigger: ACGGTGCAAGCCGGCACATCACAAACCAGTGGACAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTGTCCACTGGTTTGTaGTGTGCCGGCTTGCACCGT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLSTGL*CAGLHR
Trigger: ACGGTGCAAGCCGGCACATCACAAACCAGTGGACAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR TCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAGTCATCCTCTCGGGTaGTCAGGACGCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPSHPLG*SGRQRG
Trigger: TCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGAGTCATCCTCTCGGGTaGTCAGGACGCCAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKSHPLG*SGRQRG
Trigger: TCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVARSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: LISKASCLSCSACCAISSVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVACCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGGAGGTAAGCAGGCCTaGGACTGGGTAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSGGKQA*DWVEMG
Trigger: TCCCATCTCTACCCAGTCTCAGGCCTGCTTACCTCC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCCTAGTCCCCAAGGCTaGCGAAACATGGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGPSPQG*RNMVWP
Trigger: AGGCCAGACCATGTTTCGTCAGCCTTGGGGACTAGG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCACATTGGCTGGTCTGTaGAATGCCCTTGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSTLAGL*NALGGR
Trigger: CCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGGGGAGCAGCAGCCCCTaGGGGGTAGACAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLGSSSP*GVDSDP
Trigger: TGGATCACTGTCTACCCCTCAGGGGCTGCTGCTCCC...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTGGTCTCGAACTCCTaGCCTCAGGTAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALVSNS*PQVICL
Trigger: CAGGCAGATTACCTGAGGTCAGGAGTTCGAGACCAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGAGGAGGCTGAGGCATaGGACCTGCTTGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCEEAEA*DLLELE
Trigger: CTCCAGTTCAAGCAGGTCTCATGCCTCAGCCTCCTC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTGCTCAGGCTGGTCTTaGACTCCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQCSGWS*TPGLKQ
Trigger: CTGCTTGAGCCCAGGAGTTCAAGACCAGCCTGAGCA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTAGTCCGGGGTGGGCTTaGTGTGGGTCCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: CHLSGHPPGFRQYGYGSSSPGWA*CGSPAP
Trigger: GGGTGCTGGGGACCCACATCAAGCCCACCCCGGACT...AGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPMNHQR*GQGAHA
Trigger: GGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCAT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQGCHHE*CPAKSV
Trigger: CACAGACTTGGCTGGACAGCACTCATGGTGGCAGCC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRHWFVM*RLAPSC
Trigger: ACAGGACGGTGCAAGCCGGCACATCACAAACCAGTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKCSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTCSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: FGNTVTAHLQSFLPQLQRLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...GCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: QRVLCDLVAGHIGGHDEDVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...ATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACTCAGGGTGCAGTGGTaGCCGGATGTCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLRVQW*PDVQSA
Trigger: CGCAGACTGGACATCCGGGCACCACTGCACCCTGAG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACCTCCATCCCTCCTTaGCTTGAAGGGGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTSIPP*LEGGGK
Trigger: CTTTCCACCCCCTTCAAGGCAAGGAGGGATGGAGGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGGCTACTGTAGATGGTaGCCAAGGATGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGGYCRW*PRMHQA
Trigger: GGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACTGGGAGGCAGGGCTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPLGGRA*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAGCCCTGCCTCCCAG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGTGGTGGTGGGCACCTaGAATCCCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSVVVGT*NPSYSG
Trigger: TCCTGAGTAGCTGGGATTGCAGGTGCCCACCACCAC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTCAGGGTCCTGGCCTaGCACTTTCATATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGLRVLA*HFHILV
Trigger: AACCAAGATATGAAAGTGGCAGGCCAGGACCCTGAG...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp TCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACATGGCCCCGGAGCGTTaGGGACCTGAGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SLQSMVFPFPSVSRPSSNMAPER*GPEQPE
Trigger: CTCCGGCTGCTCAGGTCCCCAACGCTCCGGGGCCAT...GTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGTCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGSSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PAHRLLPAGSPHGVLPHVTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...AACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: TAHLQSFLPQLQRVLCDLANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...GAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVNFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVANFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LIGCCQLVHHTAFYLMFDRRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...ATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTRRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAGTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSAWGEGSSGLLSSCLSESPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGGTGGCAGTTCAGTCTaGTCCCTGTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVGGSSV*SLSSSS
Trigger: GCTGGAAGAAGACAGGGACCAGACTGAACTGCCACC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGGACTAGCAGAGGGTaGCAGTTCAGTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRTSRG*QFSLVP
Trigger: AGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTGAGGCTGACTCCATaGCCATGTGGGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLRLTP*PCGQRS
Trigger: TGACCTCTGCCCACATGGCCATGGAGTCAGCCTCAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCTGTGAAATGCCCTTaGGGGACGGTGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSVKCP*GTVSRP
Trigger: GGGTCTGGACACCGTCCCCCAAGGGCATTTCACAGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGTGGGGGAAGGTGGGTaGACTGCTTATCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCVGEGG*TAYQQW
Trigger: CCACTGCTGATAAGCAGTCCACCCACCTTCCCCCAC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGTGGGGGAAGGTGGGTaGACTGCTTATCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSVGEGG*TAYQQW
Trigger: CCACTGCTGATAAGCAGTCCACCCACCTTCCCCCAC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCGCCTGTGGGGGAAGGTaGGTGGACTGCTTATCAGCA +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVACGGR*VDCLSA
Trigger: TGCTGATAAGCAGTCCACCCACCTTCCCCCACAGGC...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GTGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAAAGTCCTGCCCTTCAGTaGCTGTGCCCTCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: VQGRAALETGAVVQPVVESPALQ*LCPPSS
Trigger: GCTTGATGGAGGGCACAGCCACTGAAGGGCAGGACT...TTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CCA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTGGGGTGGGCTTGATGTaGGTCCCCAGCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSGVGLM*VPSTHC
Trigger: ACAGTGGGTGCTGGGGACCCACATCAAGCCCACCCC...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS-3UTR CCA 90 bp GCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTCCTGGCCCTCAGTGCTCTCCCTTCTaGGCTCCTAGTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ALPSGLLVSSLLTPFPGPQCSPF*APSVLP
Trigger: AGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTG...AGGGCCAGGAAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTGGAGCGTTGGGGACCTaGGCAGCCGGAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: IPPEVSFQDRANHILLEVGALGT*AAGGVA
Trigger: GGCTACTCCTCCGGCTGCTCAGGTCCCCAACGCTCC...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR TCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTGTCTGTGCTTTGCATTaGCATCTGCACCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGVCALH*HLHLLT
Trigger: TGTCAGAAGGTGCAGATGTCAATGCAAAGCACAGAC...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GTGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAACGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: VQGRAALETGAVVQPVVERSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...TTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR TCA 90 bp TCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: SMISRRSLGRRFSAWGEGSRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...GCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCACTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: ASLQSMVFPFPSVSRPSSLSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...TGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGAGATGGGAGCGGCATaGGGGGAAGGTAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQEMGAA*GEGKSV
Trigger: AACTGACTTACCTTCCCCTCATGCCGCTCCCATCTC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCTGCACCTGGGCCTCTaGGCTCTTCCTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASLHLGL*ALPPLP
Trigger: TGGGAGTGGAGGAAGAGCTCAGAGGCCCAGGTGCAG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCTGAGGGGTAGACAGTaGTCCAAGCATCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSLRGRQ*SKHLLE
Trigger: CTCCAGCAGATGCTTGGATCACTGTCTACCCCTCAG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCAGGAGAATCACTTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRAGESL*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAAGTGATTCTCCTGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGTAGGACAAGTGAGCTaGGCCTGGGATGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVVGQVS*AWDAME
Trigger: TTCCATAGCATCCCAGGCTCAGCTCACTTGTCCTAC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTCCATTGCTGTCCCTaGATTGCCCAGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFHCCP*IAQFCS
Trigger: GGAGCAGAACTGGGCAATTCAGGGACAGCAATGGAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAAGTCATCCTCTCGGGTaGTCAGGACTTCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: FLPQLQRVLCDLVAGHIGSHPLG*SGLPKN
Trigger: ATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACT...TCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCCTGCCCAGCTTCTTaGCTGAGCATCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPCPAS*LSIILC
Trigger: GCAAAGAATGATGCTCAGTCAAGAAGCTGGGCAGGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTGGTGTTCTTCAGTaGGACTCCAGCATTCAGCCC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLGVLQ*DSSIQP
Trigger: GGGCTGAATGCTGGAGTCTCACTGAAGAACACCAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCTTCTGACAACAGCCTaGGGGGCCATTCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLLLTTA*GAIQRR
Trigger: CCTCCTCTGAATGGCCCCTCAGGCTGTTGTCAGAAG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAGCATCTTGACAGCTaGTTCGATAACCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQHLDS*FDNPVV
Trigger: CACCACGGGGTTATCGAAGCAGCTGTCAAGATGCTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTGCTACCCTCAGCCACTaGGGCTCCCCGAGACTCCCA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPATLSH*GSPRLP
Trigger: TGGGAGTCTCGGGGAGCCGCAGTGGCTGAGGGTAGC...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTTGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGCWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLGCHHE*CPAKSV
Trigger: CACAGACTTGGCTGGACAGCACTCATGGTGGCAGCC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRVSVDG*HHECCP
Trigger: TGGACAGCACTCATGGTGGCAGCCATCAACCGAAAC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQHWFVM*RLAPSC
Trigger: ACAGGACGGTGCAAGCCGGCACATCACAAACCAGTG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR GCA 90 bp AGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAPQHWGTASTSWSAGHPPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...AGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LSMISRRSLGRRFSAWGEPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...CTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACTCAGCTGCAGCGCGTaGTGTGCGATCTCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPLSCSA*CAISSL
Trigger: CAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCACACCTTCTCAGGGTaGAGTGGTGCCCGGATGTCC +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPHTFSG*SGARMS
Trigger: GGACATCCGGGCACCACTGCACCCTGAGAAGGTGTG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCACCTCCATCCCTCCTTaGCTTGAAGGGGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVTSIPP*LEGGGK
Trigger: CTTTCCACCCCCTTCAAGGCAAGGAGGGATGGAGGT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGACAATTTCGGCTCACTaGAACCTCCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQTISAH*NLHLPG
Trigger: ACCCGGGAGGTGGAGGTTGCAGTGAGCCGAAATTGT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAAGATCTGCACTTGCTaGAGGTCCCATCCACTCACC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAKICTC*RSHPLT
Trigger: GGTGAGTGGATGGGACCTGCAGCAAGTGCAGATCTT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCCACCCAGCCTGGAGTaGAGTGGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVPPSLE*SGMIIA
Trigger: AGCTATGATCATGCCACTGCACTCCAGGCTGGGTGG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGAGATAGGCTGGAGTaGAGTGGCACGATCTCATCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGDRLE*SGTISS
Trigger: AGATGAGATCGTGCCACTGCACTCCAGCCTATCTCC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACACGTCCAACATGGCTaGCGCGGCGCGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPHVQHG*RGAFED
Trigger: GTCTTCGAACGCGCCGCGGCAGCCATGTTGGACGTG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGGCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR CCA 90 bp ATCCCCTGGGGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: IPWGMEEWIPNIAALQMPQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...GGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp ATCCCCTGGGGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: IPWGMEEWIPNIAALQMPPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...GGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGGGCTGCATCCTTGTTaGACGGACTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQGLHPC*TDSCCS
Trigger: GCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGGGCTGCATCCTTGTTaGACGGACTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSGLHPC*TDSCCS
Trigger: GCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRALVH*FVMCRL
Trigger: AAGCCGGCACATCACAAACCAGTGGACAAGTGCCCT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRALVH*FVMCRL
Trigger: AAGCCGGCACATCACAAACCAGTGGACAAGTGCCCT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000543042.6
CDS-3UTR CCA 90 bp CAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAAGTCGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QGRAALETGAVVQPVVEVAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...GACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp TTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FGNTVTAHLQSFLPQLQRAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...GCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTTCGCAGCACCCACTGTaGCGATGGCGCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPSQHPL*RWRSPG
Trigger: GCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGCGA...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCNFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: EHHSIGALLQLLGQLATLTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...GAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: TSRSQSSVMLCLCLALLARAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...GGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ACCAISSLATLEVMMKMASLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: RAPQHWGTASTSWSAGHPQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...AGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEARRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCTCTCCAGACGCAGCTTaGGGAGGCGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSSPDAA*GGASQP
Trigger: AGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGA...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ACCAISSLATLEVMMKMAQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...CGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTGGAGACCCAATAAACTTGGCCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 4 (lower is better)
Translates to: LATLLMANVAWWRPNKLGPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGAACATGAGAAAGTCTaGCGACTATGGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAEHEKV*RLWGMG
Trigger: CCCCATCCCCCATAGTCGCCAGACTTTCTCATGTTC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCGGTGGCAGTTCAGTCTaGTCCCTGTCTTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVGGSSV*SLSSSS
Trigger: GCTGGAAGAAGACAGGGACCAGACTGAACTGCCACC...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTAGGACTAGCAGAGGGTaGCAGTTCAGTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCRTSRG*QFSLVP
Trigger: AGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGAACTATCTGCACCTaGGCCTCTGAGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRTICT*ASELFL
Trigger: GAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGAAGGCTGACGAAACATaGTCTGGCCTGACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGKADET*SGLTPG
Trigger: TCCTGGGGTCAGGCCAGACCATGTTTCGTCAGCCTT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCCAGGCTCGTTTAGCTaGACGAGCAGTACAGACAGG +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVPGSFS*TSSTDR
Trigger: CCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCAGGCTCGTTTAGCTaGACGAGCAGTACAGACAGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQPGSFS*TSSTDR
Trigger: CCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGATCCAAGCATCTGCTaGAGCTCACACCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVDPSIC*SSHPGF
Trigger: GAATCCAGGGTGTGAGCTCCAGCAGATGCTTGGATC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCACGCCGCGAACAGGGTaGAGTTGCGCACTACCTCAC +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSTPRTG*SCALPH
Trigger: GTGAGGTAGTGCGCAACTCCACCCTGTTCGCGGCGT...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR CCA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACGCCGCGAACAGGGTaGAGTTGCGCACTACCTCAC +
Preference number: 4 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSTPRTG*SCALPH
Trigger: GTGAGGTAGTGCGCAACTCCACCCTGTTCGCGGCGT...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGGGTAGTGGCATCCCCTaGGGGATGGAAGAGTGGATT +
Preference number: 4 (lower is better)
Translates to: PGSSMEYGSGIPWGMEEWGSGIP*GMEEWI
Trigger: AATCCACTCTTCCATCCCCCAGGGGATGCCACTACC...CCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGCACATCCAGTATGTATaGGGCTACTCAAGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWHIQYV*GYSSQS
Trigger: GCTCTGACTTGAGTAGCCCCATACATACTGGATGTG...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CAA 72 bp TGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATGGCGTCCTTGCAATCA +
Preference number: 4 (lower is better)
Translates to: CSACCAISSLAT*EVMMKMASLQS
Trigger: TGATTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGGAGCGTTGGGGACCTaGGCAGCCGGAGGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLGALGT*AAGGVA
Trigger: GGCTACTCCTCCGGCTGCTCAGGTCCCCAACGCTCC...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASLQSMVFPFPSVSRPSSGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...TGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPLSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp ATCTGCCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: ICHLAVPEQRDVVPLLGSAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...AGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAAGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: AVPEQRDVVPLLGSLGPEAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...TTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGGAGGTAAGCAGGCCTaGGACTGGGTAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPGGKQA*DWVEMG
Trigger: TCCCATCTCTACCCAGTCTCAGGCCTGCTTACCTCC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCTGCACCTGGGCCTCTaGGCTCTTCCTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPLHLGL*ALPPLP
Trigger: TGGGAGTGGAGGAAGAGCTCAGAGGCCCAGGTGCAG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCCTAGTCCCCAAGGCTaGCGAAACATGGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLPSPQG*RNMVWP
Trigger: AGGCCAGACCATGTTTCGTCAGCCTTGGGGACTAGG...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCGACTGCTGCTCAGTCTaGGTAGGGGAGGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVDCCSV*VGEGNE
Trigger: TTCATTACCCTCCCCTACTCAGACTGAGCAGCAGTC...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGTGGCTAAGGTGGGCTTaGAACATTGGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGWLRWA*NIGWSV
Trigger: CACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCA...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGTCACACCCTGGATTCTaGCTGCCTCATACCCACCAT +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGSHPGF*LPHTHH
Trigger: ATGGTGGGTATGAGGCAGTCAGAATCCAGGGTGTGA...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTGGGAGCAGCAGCCCCTaGGGGGTAGACAGTGATCCA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPGSSSP*GVDSDP
Trigger: TGGATCACTGTCTACCCCTCAGGGGCTGCTGCTCCC...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGAGCTTCTTAGAGAATaGCTGATGCCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVELLRE*LMPGLR
Trigger: TCTCAGCCCTGGCATCAGTCATTCTCTAAGAAGCTC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCTCTAGCTCTGTCTGCTaGGCAGGCCTACAAGCAATG +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVSSSVC*AGLQAM
Trigger: CATTGCTTGTAGGCCTGCTCAGCAGACAGAGCTAGA...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGACTGAACCAACGGACTaGCAGCCGGGCATAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLTEPTD*QPGIRP
Trigger: AGGTCTTATGCCCGGCTGTCAGTCCGTTGGTTCAGT...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAGAGGAGGCTGAGGCATaGGACCTGCTTGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEEEAEA*DLLELE
Trigger: CTCCAGTTCAAGCAGGTCTCATGCCTCAGCCTCCTC...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAAACTCCAGACCTAGGTaGTCCACCTGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPNSRPR*STCLGL
Trigger: GAGGCCCAGGCAGGTGGATCACCTAGGTCTGGAGTT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGAGTCATCCTCTCGGGTaGTCAGGACTTCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LISKASCLSCSACCAISSSHPLG*SGLPKN
Trigger: ATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACT...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCTTGGTGTTCTTCAGTaGGACTCCAGCATTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVLGVLQ*DSSIQP
Trigger: GGGCTGAATGCTGGAGTCTCACTGAAGAACACCAAG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCAGCATCTTGACAGCTaGTTCGATAACCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQQHLDS*FDNPVV
Trigger: CACCACGGGGTTATCGAAGCAGCTGTCAAGATGCTG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGCCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSVSVDG*HHECCP
Trigger: TGGACAGCACTCATGGTGGCAGCCATCAACCGAAAC...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQVSVDG*HHECCP
Trigger: TGGACAGCACTCATGGTGGCAGCCATCAACCGAAAC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVSWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVATALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAACCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: AVPEQRDVVPLLGSLGPEPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...TTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCGTGCAATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: LLDSAVVISKNSIVQGRAISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...TGCACGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp GATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCTTATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: DVQSASLAVLVDDLQTQLISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...AAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAASSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GACGAGTTGGATGAGCTCCGAGTGGCAGAAGGGGAGGAAGTAGACGATCTCATTCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: DELDELRVAEGEEVDDLILLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...AATGAGATCGTCTACTTCCTCCCCTTCTGCCACTCGGAGCTCATCCAACTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: LIGCCQLVHHTAFYLMFDVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...ATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCACCAGGCCTTACTGTaGCTGGCTAAGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSHQALL*LAKVGL
Trigger: CAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTACCCTGGATTCTGACTaGCTCATACCCACCATACTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVATLDSD*LIPTIL
Trigger: CAGTATGGTGGGTATGAGGCAGTCAGAATCCAGGGT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCGAGATCGCGCCACTaGACTCCAGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPPRSRH*TPAWGT
Trigger: TGTCCCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCCGAGATCGCGCCACTaGACTCCAGCTTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAPRSRH*TPAWGT
Trigger: TGTCCCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGTGATTTCAGCTCACTaGAACCTCCGCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPVISAH*NLRLLG
Trigger: GCCCAGGAGGCGGAGGTTGCAGTGAGCTGAAATCAC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGGAACATCTGTCATATaGCTGCACTGTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVGTSVI*LHCARF
Trigger: GAACCTGGCACAGTGCAGGCATATGACAGATGTTCC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGCAGTGAGCCAAGATTaGACCACCGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPAVSQD*TTALQP
Trigger: AGGCTGGAGTGCGGTGGTGCAATCTTGGCTCACTGC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAGCAGTGAGCCAAGATTaGACCACCGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEAVSQD*TTALQP
Trigger: AGGCTGGAGTGCGGTGGTGCAATCTTGGCTCACTGC...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTCACCCAGGCTGGAGTaGAGCAGCACAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKSPRLE*SSTVLA
Trigger: AGCCAAGACTGTGCTGCTGCACTCCAGCCTGGGTGA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTCAAGGGATTCCTGTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVFKGFL*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCACAGGAATCCCTTGAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGATAGGGTGTCACTCTaGCACCCAGCCTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKDRVSL*HPAWSA
Trigger: TGCACTCCAGGCTGGGTGGCAGAGTGACACCCTATC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp TTGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCCACGTCCAACATGGCTaGCGCGGCGCGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSLIWTSPRFSAIRLRLIHVQHG*RGAFED
Trigger: GTCTTCGAACGCGCCGCGGCAGCCATGTTGGACGTG...GATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGGGCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQGLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGATGGCCCCGGAGCGTTaGGGACCTGAGCAGCCGGAG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLMAPER*GPEQPE
Trigger: CTCCGGCTGCTCAGGTCCCCAACGCTCCGGGGCCAT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GAAAGTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTGATTCCAGGGTCACTTCTTGCATATTGTTaGCACGGGCAGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: ESRSPAALRSSQQVIPGSLLAYC*HGQLPT
Trigger: TGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAG...TGACCCTGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTCTTCTTGCATATTGTTaGCACGGGCAGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSLLAYC*HGQLPT
Trigger: TGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAG...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAATCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCESSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVARAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVADGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVACCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ARMSSLRVLLSLSMISRRCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp TTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAGCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: FSAWGEGSSGLLSSCLSEQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTTGTTAGCAGGTTATaGGCCCACAACAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLVSRL*AHNKGA
Trigger: GGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCTTGTTAGCAGGTTATaGGCCCACAACAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGLVSRL*AHNKGA
Trigger: GGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAAAGTCTGGCGACTATaGGGGATGGGGATCATTCTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAKVWRL*GMGIIL
Trigger: CAGAATGATCCCCATCCCCCATAGTCGCCAGACTTT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGAACATGAGAAAGTCTaGCGACTATGGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGEHEKV*RLWGMG
Trigger: CCCCATCCCCCATAGTCGCCAGACTTTCTCATGTTC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATCTGTGAAATGCCCTTaGGGGACGGTGTCCAGACCC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTSVKCP*GTVSRP
Trigger: GGGTCTGGACACCGTCCCCCAAGGGCATTTCACAGA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGTGGGCTTGAAACATTaGCTGGTCTGTGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRVGLKH*LVCEMP
Trigger: GGGCATTTCACAGACCAGCCAATGTTTCAAGCCCAC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTAGTGGCTACTGTAGATaGTGCCCAAGGATGCACCAG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCSGYCR*CPRMHQ
Trigger: CTGGTGCATCCTTGGGCACCATCTACAGTAGCCACT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCTGGAGCTCACACCCTaGATTCTGACTGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSLELTP*ILTASY
Trigger: GTATGAGGCAGTCAGAATCCAGGGTGTGAGCTCCAG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGATCCAAGCATCTGCTaGAGCTCACACCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGDPSIC*SSHPGF
Trigger: GAATCCAGGGTGTGAGCTCCAGCAGATGCTTGGATC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTCAGAGCTCAAATCCTaGCCACAGCAACATGGGACA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSELKS*PQQHGT
Trigger: TGTCCCATGTTGCTGTGGCCAGGATTTGAGCTCTGA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 72 bp GTGGGCTTGAAACATTGGCTGGTCTGTGAAATGCCCTaGGGGGACGGTGTCCAGACCCTCTGCTTTGTGACT +
Preference number: 4 (lower is better)
Translates to: VGLKHWLVCEMP*GDGVQTLCFVT
Trigger: AGTCACAAAGCAGAGGGTCTGGACACCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 72 bp ATGCACCAGGCCTTACTGTGCCTGGCTAAGGTGGGCTaGAAACATTGGCTGGTCTGTGAAATGCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: MHQALLCLAKVG*KHWLVCEMPLG
Trigger: CCCCAAGGGCATTTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 72 bp GTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGGGTGATCAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: VQPLKLARLFSL*LKSSSRVIRTS
Trigger: GGAAGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTGACAACAGCCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLTTAC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000538039.6
ENST00000543042.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGTCTGTGCTTTGCATTaGCATCTGCACCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVVCALH*HLHLLT
Trigger: TGTCAGAAGGTGCAGATGTCAATGCAAAGCACAGAC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATTGTCCACTGGTTTGTaGTGTGCCGGCTTGCACCGT +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLSTGL*CAGLHR
Trigger: ACGGTGCAAGCCGGCACATCACAAACCAGTGGACAA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTTGTCCACTGGTTTGTaGTGTGCCGGCTTGCACCGT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKLSTGL*CAGLHR
Trigger: ACGGTGCAAGCCGGCACATCACAAACCAGTGGACAA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTRSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKRSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGGAGGTAAGCAGGCCTaGGACTGGGTAGAGATGGGA +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPGGKQA*DWVEMG
Trigger: TCCCATCTCTACCCAGTCTCAGGCCTGCTTACCTCC...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCTGAGGGGTAGACAGTaGTCCAAGCATCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPLRGRQ*SKHLLE
Trigger: CTCCAGCAGATGCTTGGATCACTGTCTACCCCTCAG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCAGGCAGGGCTTGCAGTaGGCCGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSRQGLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCGGCTCACTGCAAGCCCTGCCT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCGAGCTTCTTAGAGAATaGCTGATGCCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVELLRE*LMPGLR
Trigger: TCTCAGCCCTGGCATCAGTCATTCTCTAAGAAGCTC...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGACTGAACCAACGGACTaGCAGCCGGGCATAAGACCT +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLTEPTD*QPGIRP
Trigger: AGGTCTTATGCCCGGCTGTCAGTCCGTTGGTTCAGT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGTCATCCTCTCGGGTaGTCAGGACTTCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSHPLG*SGLPKN
Trigger: ATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340729.9
ENST00000535477.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTCTCTTGGGGCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQVSWGC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGCCCCAAGAGAC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR GCA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTCAGCATCTTGACAGCTaGTTCGATAACCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIQHLDS*FDNPVV
Trigger: CACCACGGGGTTATCGAAGCAGCTGTCAAGATGCTG...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVCWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp AAAGGGGAAAGTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTGATTCCATGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: KGESRSPAALRSSQQVIPCWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...TGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGACTTTCCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGCCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCCAAGTCTGTGCTTTaGATTGACATCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRAKSVL*IDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAAGCACAGACTTGGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCCAAGTCTGTGCTTTaGATTGACATCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAAKSVL*IDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAAGCACAGACTTGGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCCAAGTCTGTGCTTTaGATTGACATCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVAKSVL*IDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAAGCACAGACTTGGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAVQPSL*FALTSA
Trigger: TGCAGATGTCAATGCAAAGCACAGACTTGGCTGGAC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPGCHHE*CPAKSV
Trigger: CACAGACTTGGCTGGACAGCACTCATGGTGGCAGCC...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLVSVDG*HHECCP
Trigger: TGGACAGCACTCATGGTGGCAGCCATCAACCGAAAC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPHWFVM*RLAPSC
Trigger: ACAGGACGGTGCAAGCCGGCACATCACAAACCAGTG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR GCA 90 bp CTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCGTGCACACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLDSAVVISKNSIVQGRAHWFVM*RLAPSC
Trigger: ACAGGACGGTGCAAGCCGGCACATCACAAACCAGTG...TGCACGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QVFGNTVTAHLQSFLPQLPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...CAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: IPPEVSFQDRANHILLEVCSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLSWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTGCTTCCTGCCTCAGCTaGAGCGCGTGCTGTGCGATC +
Preference number: 4 (lower is better)
Translates to: IPPEVSFQDRANHILLEVASCLS*SACCAI
Trigger: GATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGC...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCTGCGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: QSMVFPFPSVSRPSSNSCVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...GCAGCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAATTGCAGAACTATCTaGACCTGGGCCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSNCRTI*TWASEL
Trigger: GAGCTCAGAGGCCCAGGTGCAGATAGTTCTGCAATT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCTCAAGCGATCCTCCTaGCTCAGCCTCCTACGTAGC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEALKRSS*LSLLRS
Trigger: GCTACGTAGGAGGCTGAGGCAGGAGGATCGCTTGAG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTATGAAACGGAGTCTTaGTCTGTCACTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAYETES*SVTQAA
Trigger: TGCAGCCTGAGTGACAGAGCAAGACTCCGTTTCATA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCATCTGTCATATGCCTaGACTGTGCCAGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVHLSYA*TVPGSV
Trigger: CACAGAACCTGGCACAGTGCAGGCATATGACAGATG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGAGAAGATCTGCACTTaGTGCAGGTCCCATCCACTC +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLEKICT*CRSHPL
Trigger: GAGTGGATGGGACCTGCAGCAAGTGCAGATCTTCTC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTTCACCCAGGCTGGAGTaGAGCAGCACAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASSPRLE*SSTVLA
Trigger: AGCCAAGACTGTGCTGCTGCACTCCAGCCTGGGTGA...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGATAGGGTGTCACTCTaGCACCCAGCCTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASDRVSL*HPAWSA
Trigger: TGCACTCCAGGCTGGGTGGCAGAGTGACACCCTATC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTACACTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVATLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGTGT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340729.9
CDS-3UTR GCA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTGCCAAGTCTGTGCTTTaGATTGACATCTGCACATGC +
Preference number: 4 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAAAKSVL*IDICTC
Trigger: GCATGTGCAGATGTCAATGCAAAGCACAGACTTGGC...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp GTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCTTGCTGCTCTGCAAATaGCCTGCCAAAAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VVASPGGWKSGFPTLLLCLLLCK*PAKRGK
Trigger: CTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAA...GCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp GTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCCCAACATTGCTGCTCTaGAAATGCCCTGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: VVASPGGWKSGFPTLLLCPTLLL*KCPAKR
Trigger: CCTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGG...GCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp CCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGGATTCCCAACATTGCTaGTCTGCAAATGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGSSMEYGSGIPWGMEEWDSQHC*SANALP
Trigger: TGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATC...CCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp TATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCACCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: YIWLSAWPALFFLFQMIPPEAPP*PRSVGD
Trigger: GTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGG...TGGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGG +
Preference number: 4 (lower is better)
Translates to: GGHDEDGVLAINGLPFSIEGVPK*QPRGIW
Trigger: CCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTC...GATGGAAAAGGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GACGATCTCATTGATCCGTCCCAGAAACTCATCCCTCCGGAAGTGAGCTTTCAGCCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: DDLIDPSQKLIPPEVSFQPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...CTGAAAGCTCACTTCCGGAGGGATGAGTTTCTGGGACGGATCAATGAGATCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTGGGCTGCATCCTTGTTaGACGGACTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GSSMEYGSGIPWGMEEWIGLHPC*TDSCCS
Trigger: GCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCC...AATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTTCTTGCATATTGTTaGCACGGGCAGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALLAYC*HGQLPT
Trigger: TGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTCTTGCATATTGTTaGCACGGGCAGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLLAYC*HGQLPT
Trigger: TGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTCCTCTGCAGGGGGTTaGCTCCTCCATCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEASSAGG*LLHQAA
Trigger: AGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAAFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp TTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSMISRRSLGRRFSAWGELCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...CTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GTGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAAGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: VQGRAALETGAVVQPVVEDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...TTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGTCGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: VLCDLVAGHIGGHDEDGVDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...GACGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TCTGGGCTTTTGAGTAGCTGCTTGTCTGAGTCCTCCACCGTGATGCGCAAAGTACTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SGLLSSCLSESSTVMRKVLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...TACTTTGCGCATCACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 4 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAAAGTCTGGCGACTATaGGGGATGGGGATCATTCTG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSKVWRL*GMGIIL
Trigger: CAGAATGATCCCCATCCCCCATAGTCGCCAGACTTT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAGGACTAGCAGAGGGTaGCAGTTCAGTCTGGTCCCT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPRTSRG*QFSLVP
Trigger: AGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCCAGTGGAGCCATTCTaGGGACTGAGTTGCATGAGG +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPPVEPF*GLSCMR
Trigger: CCTCATGCAACTCAGTCCCCAGAATGGCTCCACTGG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGAAGGCTGACGAAACATaGTCTGGCCTGACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKKADET*SGLTPG
Trigger: TCCTGGGGTCAGGCCAGACCATGTTTCGTCAGCCTT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCATTAGCTGGGTGTGGTaGTGGGCACCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSISWVW*WAPAIP
Trigger: TGGGATTGCAGGTGCCCACCACCACACCCAGCTAAT...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGGGGTTTCACCATGTTaGTCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAGVSPC*SGWSQS
Trigger: AGATTGAGACCATCCTGACCAACATGGTGAAACCCC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGCCAGGTTCTGTGAATaGCTGAACAGCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGARFCE*LNSLAS
Trigger: AGATGCCAAGCTGTTCAGCCATTCACAGAACCTGGC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGGCCACCACCATGCCTaGCCATCAATCTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCGHHHA*PSIFYK
Trigger: CTTGTAAAAGATTGATGGCCAGGCATGGTGGTGGCC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CAACATTGCTGCTCTGCAAATGCCCTGCCAAAAGGGGAAAGTCGCAGCCCGGCATGGGGGATGGAAGAGTaGATTCCCAACATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QHCCSANALPKGESRSPAWGMEE*IPNIAA
Trigger: AGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCA...TGCCGGGCTGCGACTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR CAA 72 bp GTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTaGCTTGGTTATCTGGGACTGCTGCTCAGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VGLLKEAPTELS*LGYLGLLLSLS
Trigger: ACTCAGACTGAGCAGCAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
3UTR CAA 72 bp TGCTTGGCTCTCTTGGCCCAGAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCCGAGTGGCAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: CLALLAQKFSSL*TSWMSSEWQKG
Trigger: CCCCTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGTCCTAGCCATCTCCTaGACTCCAGGGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAVLAIS*TPGHLS
Trigger: GGACAAGTGCCCTGGAGTTCAGGAGATGGCTAGGAC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR TCA 90 bp TCTTGCCACAGAGTTTTCCAACGGACAAAGGAAGAAGCTTTCTGCTTGGGGATGAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SCHRVFQRTKEEAFCLGMRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...CATCCCCAAGCAGAAAGCTTCTTCCTTTGTCCGTTGGAAAACTCTGTGGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAACATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ACATCTGCCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: TSATSRSQSSVMLCLCLASRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...AGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSRQLLS*RLVSRL
Trigger: TAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCT...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKRQLLS*RLVSRL
Trigger: TAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTCAGAGGTCAAACCCATaGTCTCTCTTCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCQRSNP*SLFLQL
Trigger: AAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCTG...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTACATTGGCTGGTCTGTaGAATGCCCTTGGGGGACGG +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPTLAGL*NALGGR
Trigger: CCGTCCCCCAAGGGCATTTCACAGACCAGCCAATGT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCTGGCTAAGGTGGGCTTaGAACATTGGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSWLRWA*NIGWSV
Trigger: CACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCA...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACTGGCCACAGTTAACTaGACCAACGGACTGACAGCC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPLATVN*TNGLTA
Trigger: GGCTGTCAGTCCGTTGGTTCAGTTAACTGTGGCCAG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGCCTGGCAAACATGGTaGAACCCCGTCTTTACTAAA +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCAWQTW*NPVFTK
Trigger: TTTAGTAAAGACGGGGTTTCACCATGTTTGCCAGGC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTTGCTCAGGCTGGTCTTaGACTCCTGGGCTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRACSGWS*TPGLKQ
Trigger: CTGCTTGAGCCCAGGAGTTCAAGACCAGCCTGAGCA...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCTGTACCACACTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQPVPHC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGTGTGGTACAGG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340729.9
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGTCATCCTCTCGGGTaGTCAGGACTTCCAAAGAAT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSHPLG*SGLPKN
Trigger: ATTCTTTGGAAGTCCTGATCACCCGAGAGGATGACT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340729.9
ENST00000538039.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCCTGCCCAGCTTCTTaGCTGAGCATCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKPCPAS*LSIILC
Trigger: GCAAAGAATGATGCTCAGTCAAGAAGCTGGGCAGGG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCAGCATCTTGACAGCTaGTTCGATAACCCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKQHLDS*FDNPVV
Trigger: CACCACGGGGTTATCGAAGCAGCTGTCAAGATGCTG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQCWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR GCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCVQPSL*FALTSA
Trigger: TGCAGATGTCAATGCAAAGCACAGACTTGGCTGGAC...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LQSMVFPFPSVSRPSSNSGCHHE*CPAKSV
Trigger: CACAGACTTGGCTGGACAGCACTCATGGTGGCAGCC...GCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSCSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PPGFRQYGYGSSPKLPASTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...TGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGTCCTGCTCATAGGCTaGTGCCAGCTGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAVLLIG*CQLVHH
Trigger: GTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGGAC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAACCTCCATCCCTCCTTaGCTTGAAGGGGGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPTSIPP*LEGGGK
Trigger: CTTTCCACCCCCTTCAAGGCAAGGAGGGATGGAGGT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGCTGTGTTCTTAGCTaGCATACTTCTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASCVLS*HTSELP
Trigger: AGGAAGCTCAGAAGTATGGCAGCTAAGAACACAGCT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCACCAGGCCTTACTGTaGCTGGCTAAGGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAHQALL*LAKVGL
Trigger: CAAGCCCACCTTAGCCAGGCACAGTAAGGCCTGGTG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGATGGTGCCCAAGGATaGACCAGGCCTTACTGTGCC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRADGAQG*TRPYCA
Trigger: GGCACAGTAAGGCCTGGTGCATCCTTGGGCACCATC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGGAAGGTGGGTGGACTaGTTATCAGCAGTGGCTACT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKGRWVD*LSAVAT
Trigger: AGTAGCCACTGCTGATAAGCAGTCCACCCACCTTCC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGGAAGGTGGGTGGACTaGTTATCAGCAGTGGCTACT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPGRWVD*LSAVAT
Trigger: AGTAGCCACTGCTGATAAGCAGTCCACCCACCTTCC...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAAGTGATCCAAGCATCTaGTGGAGCTCACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCESDPSI*WSSHPG
Trigger: TCCAGGGTGTGAGCTCCAGCAGATGCTTGGATCACT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAACAATTTCGGCTCACTaGAACCTCCACCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPTISAH*NLHLPG
Trigger: ACCCGGGAGGTGGAGGTTGCAGTGAGCCGAAATTGT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGAGAAGATCTGCACTTaGTGCAGGTCCCATCCACTC +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKEKICT*CRSHPL
Trigger: GAGTGGATGGGACCTGCAGCAAGTGCAGATCTTCTC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAACCCACTGAGAAGATCTaGACTTGCTGCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEPTEKI*TCCRSH
Trigger: ATGGGACCTGCAGCAAGTGCAGATCTTCTCAGTGGG...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGACTGGAGGTGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLTGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCCACCTCCAGT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGCGAACAGGGTGGAGTTaGGCACTACCTCACGGGAGA +
Preference number: 4 (lower is better)
Translates to: PHQGNIERESGRMTTYEQRTGWS*ALPHGR
Trigger: TCTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCG...CTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp AAAGGGGAAAGTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTGATTCCATTTCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: KGESRSPAALRSSQQVIPFLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGAAA...TGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGACTTTCCCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGGGCTGCATCCTTGTTaGACGGACTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAGLHPC*TDSCCS
Trigger: GCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCERALVH*FVMCRL
Trigger: AAGCCGGCACATCACAAACCAGTGGACAAGTGCCCT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294053.9
CDS-3UTR CCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLRALVH*FVMCRL
Trigger: AAGCCGGCACATCACAAACCAGTGGACAAGTGCCCT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000437826.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCACCTCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: ATSCRSWNSDMSSLMKPFLCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...AAAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGAGAGCACCACAGCATTaGGGCACTGCTTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLRAPQH*GTASTS
Trigger: AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVARPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: EHHSIGALLQLLGQLATLRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...GAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAAILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGAACATGAGAAAGTCTaGCGACTATGGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPEHEKV*RLWGMG
Trigger: CCCCATCCCCCATAGTCGCCAGACTTTCTCATGTTC...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCCAGTGGAGCCATTCTaGGGACTGAGTTGCATGAGG +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASPVEPF*GLSCMR
Trigger: CCTCATGCAACTCAGTCCCCAGAATGGCTCCACTGG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACCAGTGGAGCCATTCTaGGGACTGAGTTGCATGAGG +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPPVEPF*GLSCMR
Trigger: CCTCATGCAACTCAGTCCCCAGAATGGCTCCACTGG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAAGAACTATCTGCACCTaGGCCTCTGAGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTRTICT*ASELFL
Trigger: GAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCT...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCAGAACTATCTGCACCTaGGCCTCTGAGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSRTICT*ASELFL
Trigger: GAGGAAGAGCTCAGAGGCCCAGGTGCAGATAGTTCT...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAAGGCTGACGAAACATaGTCTGGCCTGACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAKADET*SGLTPG
Trigger: TCCTGGGGTCAGGCCAGACCATGTTTCGTCAGCCTT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAGTGGCTACTGTAGATaGTGCCCAAGGATGCACCAG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPSGYCR*CPRMHQ
Trigger: CTGGTGCATCCTTGGGCACCATCTACAGTAGCCACT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCTGGAGCTCACACCCTaGATTCTGACTGCCTCATAC +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPLELTP*ILTASY
Trigger: GTATGAGGCAGTCAGAATCCAGGGTGTGAGCTCCAG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGGCACCAGCGGGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGHQRA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCCCGCTGGTGCCC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGTCAGAGCTCAAATCCTaGCCACAGCAACATGGGACA +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLSELKS*PQQHGT
Trigger: TGTCCCATGTTGCTGTGGCCAGGATTTGAGCTCTGA...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGAGCCTCCCAAATAGCTaGAATTACCGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLSLPNS*NYRHVP
Trigger: TGGCACATGCCGGTAATTCCAGCTATTTGGGAGGCT...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCTGCCAAAAGGGGAAAGTCGGCATCCCCTGGGGGATaGAAGAGTGGATTCCCAACA +
Preference number: 4 (lower is better)
Translates to: SGFPTLLLCKCPAKRGKSASPGG*KSGFPT
Trigger: TGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGC...CGACTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542555.2
3UTR CAA 72 bp TGGGCCTTGTCTACTTCATCAAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: WALSTSSKSTTA*GHCFNFLVSWP
Trigger: TGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CAA 72 bp CAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTGATCAGGACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QPLKLARLFSLL*KSSSRVIRTSK
Trigger: TTTGGAAGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR TCA 90 bp CCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGTTGTCCACTGGTTTGTaGTGTGCCGGCTTGCACCGT +
Preference number: 4 (lower is better)
Translates to: PHQGNIERESGRMTTYEQLSTGL*CAGLHR
Trigger: ACGGTGCAAGCCGGCACATCACAAACCAGTGGACAA...CTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp ATCAAGCAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGTCCTAGCCATCTCCTaGACTCCAGGGCACTTGTCC +
Preference number: 4 (lower is better)
Translates to: IKQLLDSAVVISKNSIVQVLAIS*TPGHLS
Trigger: GGACAAGTGCCCTGGAGTTCAGGAGATGGCTAGGAC...TTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCTGCCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QSMVFPFPSVSRPSSNSCHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...GCAGCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp TCGCTCCAGAAGCATCAGTCATCCCAAGAACTGCTGCCACATCCACAAGTAGTCCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: SLQKHQSSQELLPHPQVVHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...GACTACTTGTGGATGTGGCAGCAGTTCTTGGGATGACTGATGCTTCTGGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR TCA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VISALPSGLLVSSLLTPFHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp ACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: TAHLQSFLPQLQRVLCDLSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...GAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp CTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTGGAGACCCAATAAACTTGGCCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: LATLLMANVAWWRPNKLGLLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSSRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GGCCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GLVYFIKEHHSIGALLQLCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...AAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp TTGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LSLIWTSPRFSAIRLRLIAFIGW*GHIGAG
Trigger: GCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGC...GATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTGAGATGGGAGCGGCATaGGGGGAAGGTAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPEMGAA*GEGKSV
Trigger: AACTGACTTACCTTCCCCTCATGCCGCTCCCATCTC...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGACTGCTGCTCAGTCTaGGTAGGGGAGGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPDCCSV*VGEGNE
Trigger: TTCATTACCCTCCCCTACTCAGACTGAGCAGCAGTC...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTGGTCTCGAACTCCTaGCCTCAGGTAATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALVSNS*PQVICL
Trigger: CAGGCAGATTACCTGAGGTCAGGAGTTCGAGACCAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGCAGGAGAATCACTTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAAGESL*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAAGTGATTCTCCTGC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTGGCCACAGTTAACTaGACCAACGGACTGACAGCC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALATVN*TNGLTA
Trigger: GGCTGTCAGTCCGTTGGTTCAGTTAACTGTGGCCAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGTAGGACAAGTGAGCTaGGCCTGGGATGCTATGGAA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAVGQVS*AWDAME
Trigger: TTCCATAGCATCCCAGGCTCAGCTCACTTGTCCTAC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCCTCAGTGTTCTGTTaGGATTACAGGTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQPSVFC*DYRCEI
Trigger: TATCTCACACCTGTAATCTCAACAGAACACTGAGGG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAGTCTCTTGGGGCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTVSWGC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGCCCCAAGAGAC...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGTGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLCWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TTCTCAGCCTGGGGTGAGGGCAGTTCTGGGCTTTTGAGTAGCTGCTTGTCTGAGGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: FSAWGEGSSGLLSSCLSEVQPSL*FALTSA
Trigger: TGCAGATGTCAATGCAAAGCACAGACTTGGCTGGAC...CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCCCTCACCCCAGGCTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASVSVDG*HHECCP
Trigger: TGGACAGCACTCATGGTGGCAGCCATCAACCGAAAC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VISALPSGLLVSSLLTPFVSVDG*HHECCP
Trigger: TGGACAGCACTCATGGTGGCAGCCATCAACCGAAAC...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCCCATTTCATTCCTCTaGAGGGGGTTGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAPISFL*RGLAPP
Trigger: TGGAGGAGCCAACCCCCTGCAGAGGAATGAAATGGG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: SLQSMVFPFPSVSRPSSNASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...GTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CTGATGAAGCCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTGCTTGGCCTGCTCCTTTAGTCGCTaGTCCAGGGGGAAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LMKPFLASLCIYLAVCLACSFSR*SRGKRR
Trigger: GCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCA...GGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp ACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: TVTAHLQSFLPQLQRVLCIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...GCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp TTGTCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LSMISRRSLGRRFSAWGEIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...CTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCTGCAGCGCGTGCTGTaGGATCTCGTCGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDLQRVL*DLVAGH
Trigger: GTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGGGCTACAGACTAAATTaGAGAACTATCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGGYRLN*RTICTW
Trigger: CCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCC...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCATACTGTTAGGACATaGTTCCATTACCCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGHTVRT*FHYPRD
Trigger: GTCCCTTGGGTAATGGAAGCATGTCCTAACAGTATG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCATACTGTTAGGACATaGTTCCATTACCCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQHTVRT*FHYPRD
Trigger: GTCCCTTGGGTAATGGAAGCATGTCCTAACAGTATG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGAACACCACAACAAAATaGAATATGGGACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGNTTTK*NMGPWT
Trigger: GGTCCAGGGTCCCATATTGCATTTTGTTGTGGTGTT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGGAACATCTGTCATATaGCTGCACTGTGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKGTSVI*LHCARF
Trigger: GAACCTGGCACAGTGCAGGCATATGACAGATGTTCC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAACTGGAGGTGGAGGTTaGAGTGAGCCAAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPTGGGG*SEPRLH
Trigger: GTGCAATCTTGGCTCACTGCAACCTCCACCTCCAGT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATGTGGGCCACCACCATaGCTGGCCATCAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTCGPPP*LAINLL
Trigger: TAAAAGATTGATGGCCAGGCATGGTGGTGGCCCACA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCCACCCAGCCTGGAGTaGAGTGGCATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAPPSLE*SGMIIA
Trigger: AGCTATGATCATGCCACTGCACTCCAGGCTGGGTGG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTGGGCTGCATCCTTGTTaGACGGACTCTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPGLHPC*TDSCCS
Trigger: GCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCC...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAAGTCGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: QGRAALETGAVVQPVVEVASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...GACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVLCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp TTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LQSMVFPFPSVSRPSSNSNFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...GCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPNFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEATASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASSLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RAPQHWGTASTSWSAGHPFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...AGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCCAAAGTACAGCCCCCTaGCAGCAGGTCCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: ALSTSSKSTTALGHCFNFQSTAP*QQVLLI
Trigger: TATGAGCAGGACCTGCTGCCAGGGGGCTGTACTTTG...GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp TATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCAAGGCGCTTCTCAGCCTaGGGTGAGGGCAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: YIWLSAWPALFFLFQMIPRRFSA*GEGSSG
Trigger: CCCAGAACTGCCCTCACCCCAGGCTGAGAAGCGCCT...TGGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp GGCCACATTGGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCCAGGTGGCTGCTAGATaGTGTTGCACACCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GHIGGHDEDGVLAINGLPQVAAR*CCTPSQ
Trigger: CTGAGAAGGTGTGCAACACCATCTAGCAGCCACCTG...GGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCAGGCTGGAGTGCAGTaGCGTGATTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAQAGVQ*RDFSSL
Trigger: CAGTGAGCTGAAATCACGCCACTGCACTCCAGCCTG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTATTAGCTGGGTGTGGTaGTGGGCACCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAISWVW*WAPAIP
Trigger: TGGGATTGCAGGTGCCCACCACCACACCCAGCTAAT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCCATGTTGGTCAGGATaGTCTCAATCTCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQPCWSG*SQSLDL
Trigger: GAGATCAAGAGATTGAGACCATCCTGACCAACATGG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGATTCCCAACATTGCTGCTCTGCAAATGCCCTGCCAAAAGGGGAAAGTCGCAGTGCCTGGCAGCTCAATaGAATATGGTAGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: GFPTLLLCKCPAKRGKSQCLAAQ*NMVVAS
Trigger: GGATGCCACTACCATATTCCATTGAGCTGCCAGGCA...CTGCGACTTTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACTGACAACAGCCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLTTAC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGTCTGTGCTTTGCATTaGCATCTGCACCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKVCALH*HLHLLT
Trigger: TGTCAGAAGGTGCAGATGTCAATGCAAAGCACAGAC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR TCA 90 bp TCTTGCCACAGAGTTTTCCAACGGACAAAGGAAGAAGCTTTCTGCTTGGGGATGTTGTCCACTGGTTTGTaGTGTGCCGGCTTGCACCGT +
Preference number: 4 (lower is better)
Translates to: SCHRVFQRTKEEAFCLGMLSTGL*CAGLHR
Trigger: ACGGTGCAAGCCGGCACATCACAAACCAGTGGACAA...CATCCCCAAGCAGAAAGCTTCTTCCTTTGTCCGTTGGAAAACTCTGTGGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR TCA 90 bp ATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCAGGCCGTGCAGCCCTTaGAACTGGCGCGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: IYLAVCLASSVFPIPDDPRPCSP*NWRGCS
Trigger: TGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCT...GGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAG +
Preference number: 4 (lower is better)
Translates to: DEDGVLAINGLPFSICQPHQAAP*QCGSHQ
Trigger: CTGATGACTACCGCACTGTCAAGGAGCTGCTTGATG...CGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGCCATCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCACCTCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: ATSCRSWNSDMSSLMKPFSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...AAAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSLLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGLLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTGTTCTACCTCATGTTTaGTGGAGCGGGCGCCATAGT +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPVLPHV*WSGRHS
Trigger: ACTATGGCGCCCGCTCCATCAAACATGAGGTAGAAC...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp ATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCCTGAGTCCTCCACCGTaGTGCGCAAAGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: IYLAVCLASSVFPIPDDPLSPPP*CAKYSP
Trigger: GGGGCTGTACTTTGCGCATCACGGTGGAGGACTCAG...GGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGCTGTCCTTGTCGATaGTCTCCAGACGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PCLLHQRAPQHWGTASTSCCPCR*SPDAAW
Trigger: CCAAGCTGCGTCTGGAGATCATCGACAAGGACAGCA...AGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTAGGCAGCTCCTCTCCTaGAGGCTTGTTAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPRQLLS*RLVSRL
Trigger: TAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCCT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCCTAGTCCCCAAGGCTaGCGAAACATGGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSPSPQG*RNMVWP
Trigger: AGGCCAGACCATGTTTCGTCAGCCTTGGGGACTAGG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTGACTGCTGCTCAGTCTaGGTAGGGGAGGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPDCCSV*VGEGNE
Trigger: TTCATTACCCTCCCCTACTCAGACTGAGCAGCAGTC...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAACAGAGGTCAAACCCATaGTCTCTCTTCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEQRSNP*SLFLQL
Trigger: AAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCTG...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACTCACTGGCCAAATCTaGGCCAATTTGAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLTGQI*ANLSNQ
Trigger: TTGGTTGCTCAAATTGGCTCAGATTTGGCCAGTGAG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTACGCCCGGCCAGAAGTaGTTCTTAATTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPTPGQK*FLIRFL
Trigger: AAGGAACCTAATTAAGAATCACTTCTGGCCGGGCGT...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTTGTCACTTATCTGGACATCCTGCCGGCCCCTGTGCTaGCCACGTCCAACATGGCTG +
Preference number: 4 (lower is better)
Translates to: TFSLKFFEMVILSLIWTSCRPLC*PRPTWL
Trigger: CAGCCATGTTGGACGTGGTCAGCACAGGGGCCGGCA...GGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAATGTTGGACGGACTCTTaGTGTAGCAATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCECWTDS*CSNEPP
Trigger: TGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACA...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: IPPEVSFQDRANHILLEVASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSNSCSMMVSTSGWALSTSWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...AGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPSWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGATTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLPQLQRVLCDLVAGHIGFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...TCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCCACATTGGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCCCCTCATCAAACAGCTaGAGCATGATGGTGAGCACA +
Preference number: 4 (lower is better)
Translates to: GHIGGHDEDGVLAINGLPPSSNS*SMMVST
Trigger: TGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG...GGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCATCTCCAAAGCTTCCTaGCTCAGCTGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSISKAS*LSCSAC
Trigger: GCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGAT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCTGCAGCAGCGTGATGTTGTaGCTTTGCTTGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QSMVFPFPSVSRPSSNSCSSVML*LCLALL
Trigger: CAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCT...GCAGCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCTGCTCATAGGCTGCTaGCAGCTGGTTCACCACACG +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSLLIGC*QLVHHT
Trigger: CGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGGCTACAGACTAAATTaGAGAACTATCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLGYRLN*RTICTW
Trigger: CCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCAGCTTCCTAATGTCTaGGATGTTGGTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGQLPNV*DVGLLK
Trigger: CTTCAAAAGACCAACATCGCAGACATTAGGAAGCTG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGGCTACTGTAGATGGTaGCCAAGGATGCACCAGGCC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSGYCRW*PRMHQA
Trigger: GGCCTGGTGCATCCTTGGGCACCATCTACAGTAGCC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTAGTGATCCAAGCATCTaGTGGAGCTCACACCCTGGA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPSDPSI*WSSHPG
Trigger: TCCAGGGTGTGAGCTCCAGCAGATGCTTGGATCACT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCTGGGAGGCAGGGCTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLGGRA*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAAGCCCTGCCTCCCAG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTGTGGGCCACCACCATaGCTGGCCATCAATCTTTTA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEACGPPP*LAINLL
Trigger: TAAAAGATTGATGGCCAGGCATGGTGGTGGCCCACA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATTCAAGGGATTCCTGTaGCTCAGCCTCCCAAATAGC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPFKGFL*LSLPNS
Trigger: GCTATTTGGGAGGCTGAGGCACAGGAATCCCTTGAA...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCGAACAGGGTGGAGTTaGGCACTACCTCACGGGAGA +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLRTGWS*ALPHGR
Trigger: TCTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR GCA 90 bp GGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCTGCCAAAAGGTGGATTCCCAACATTaGTGCTCTGCAAATGCCCTG +
Preference number: 4 (lower is better)
Translates to: GMEEWIPNIAALQMPCQKVDSQH*CSANAL
Trigger: CAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCAC...CTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCTTCTTGCATATTGTTaGCACGGGCAGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSLLAYC*HGQLPT
Trigger: TGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGCTTCTGAGAACAGCAAGTTCTCGCTCCAGAAGCATCAGTCATCCCAAGAACAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLRTASSRSRSISHPKNRALVH*FVMCRL
Trigger: AAGCCGGCACATCACAAACCAGTGGACAAGTGCCCT...GTTCTTGGGATGACTGATGCTTCTGGAGCGAGAACTTGCTGTTCTCAGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CCA 90 bp CCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PHQGNIERESGRMTTYEQRALVH*FVMCRL
Trigger: AAGCCGGCACATCACAAACCAGTGGACAAGTGCCCT...CTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FRQYGYGSSPKLPASAAALCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...CGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGACCTCGTGTCGCTCCTaGAACTCGGACATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLTSCRS*NSDMSS
Trigger: GCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAANVAW*RPNKLG
Trigger: GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: IPPEVSFQDRANHILLEVNFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp TCCATCAAGCAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SIKQLLDSAVVISKNSIVSLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...CACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCCAAGGGGCCTTTATTaGATGGTGAGGGCACATAGG +
Preference number: 4 (lower is better)
Translates to: LAINGLPFSICQPALIKQPRGLY*MVRAHR
Trigger: CCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG...CTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTTGTTAGCAGGTTATaGGCCCACAACAAAGGGGCC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALVSRL*AHNKGA
Trigger: GGCCCCTTTGTTGTGGGCCCATAACCTGCTAACAAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCTGAGGCTGACTCCATaGCCATGTGGGCAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSLRLTP*PCGQRS
Trigger: TGACCTCTGCCCACATGGCCATGGAGTCAGCCTCAG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCTTCTGTGGTTGTCTTaGCAAAAATGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSLLWLS*QKCRSS
Trigger: TGAGGATCTGCATTTTTGCCAAGACAACCACAGAAG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGTTCCTAATTTTACAGTaGAGAAACCTGGCACACACC +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGFLILQ*RNLAHT
Trigger: GGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAA...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCTTCCTAATTTTACAGTaGAGAAACCTGGCACACACC +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVFLILQ*RNLAHT
Trigger: GGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAA...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATACTGCACACAGGCTaGTTACTAGCTGACTTAACT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQILHTG*LLADLT
Trigger: AGTTAAGTCAGCTAGTAACCAGCCTGTGTGCAGTAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGGGGTTTCACCATGTTaGTCAGGATGGTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPGVSPC*SGWSQS
Trigger: AGATTGAGACCATCCTGACCAACATGGTGAAACCCC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSRSPGQ*CAPLVA
Trigger: AGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGAGTAGACGATCTCATTaGTCCGTCCCAGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: QVFGNTVTAHLQSFLPQLSRRSH*SVPETH
Trigger: ATGAGTTTCTGGGACGGATCAATGAGATCGTCTACT...CAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCTGCACCTGGGCCTCTaGGCTCTTCCTCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLHLGL*ALPPLP
Trigger: TGGGAGTGGAGGAAGAGCTCAGAGGCCCAGGTGCAG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCAGAGGTCAAACCCATaGTCTCTCTTCCTACAGCTT +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAQRSNP*SLFLQL
Trigger: AAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCTG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGAGACCCTCTGCTTTGTaGCTAACATGCAGACTGAAT +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLRPSAL*LTCRLN
Trigger: ATTCAGTCTGCATGTTAGTCACAAAGCAGAGGGTCT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAGACCCTCTGCTTTGTaGCTAACATGCAGACTGAAT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPRPSAL*LTCRLN
Trigger: ATTCAGTCTGCATGTTAGTCACAAAGCAGAGGGTCT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTAAATGTGAGGAAGCCTaGAACATCTTGTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASKCEEA*NILWCQ
Trigger: CTGGCACCACAAGATGTTTCAGGCTTCCTCACATTT...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCATCTATTTTGGGGGTTaGGTGATGGCTATAGGAGTG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPIYFGG*VMAIGV
Trigger: CACTCCTATAGCCATCACTCAACCCCCAAAATAGAT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGTGTGTGTAGTTATCTaGAATACTGGCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAVCVVI*NTGKPN
Trigger: ATTTGGTTTGCCAGTATTTCAGATAACTACACACAC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTTTGAGATTACAGGTGTaGGATACTGCACCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCLRLQV*DTAPVF
Trigger: AAAAACAGGTGCAGTATCTCACACCTGTAATCTCAA...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACCCTCAGTGTTCTGTTaGGATTACAGGTGTGAGATA +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTPSVFC*DYRCEI
Trigger: TATCTCACACCTGTAATCTCAACAGAACACTGAGGG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTAGCCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPSLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPVQPSL*FALTSA
Trigger: TGCAGATGTCAATGCAAAGCACAGACTTGGCTGGAC...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAVQPSL*FALTSA
Trigger: TGCAGATGTCAATGCAAAGCACAGACTTGGCTGGAC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGCCTCACGCTTCCGCTaGTTCTCTTGGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLASRFR*FSWYLA
Trigger: AGCCAAGTACCAAGAGAAGCAGCGGAAGCGTGAGGC...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTAATTGCAGAACTATCTaGACCTGGGCCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRANCRTI*TWASEL
Trigger: GAGCTCAGAGGCCCAGGTGCAGATAGTTCTGCAATT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGGCTACAGACTAAATTaGAGAACTATCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPGYRLN*RTICTW
Trigger: CCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCC...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTACCCTGGATTCTGACTaGCTCATACCCACCATACTG +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRATLDSD*LIPTIL
Trigger: CAGTATGGTGGGTATGAGGCAGTCAGAATCCAGGGT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTATGAAACGGAGTCTTaGTCTGTCACTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAYETES*SVTQAA
Trigger: TGCAGCCTGAGTGACAGAGCAAGACTCCGTTTCATA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GTGGCTGTGCCCTCCATCAAGCAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGAAGGAAGAAGCTTTCTaGTTGGGGATGTTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: VAVPSIKQLLDSAVVISKKEEAF*LGMFSK
Trigger: CTTAGAAAACATCCCCAAGCAGAAAGCTTCTTCCTT...CTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGGCACAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CCA 90 bp ATTCTTTTCCGTTATGAGCTCCCCATCAAGGAAACATTGAGAGAGAGAGTGGCACCAGCTGTCCTGTCCTaGGAGTGTTTCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: ILFRYELPIKETLRERVAPAVLS*ECFFGT
Trigger: GGTCCCGAAGAAACACTCCCAGGACAGGACAGCTGG...TGCCACTCTCTCTCTCAATGTTTCCTTGATGGGGAGCTCATAACGGAAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CCTTCATCCTCATTGTCACTATTTCAGCAGTCTGTTGACTATCTCAAATTAGAACCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSSLSLFQQSVDYLKLEPVRPC*GPRSSC
Trigger: ACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGG...TTCTAATTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp TCCATCAAGCAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SIKQLLDSAVVISKNSIVIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...CACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp CCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: PHQGNIERESGRMTTYEQIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...CTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCTTTGTGCATATATTTaGCTGTCTGCTTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPLCAYI*LSAWPA
Trigger: AGCTGGCCAAGCAGACAGCCAAATATATGCACAAAG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTACTGCTTCAACTTCTTaGTCAGCTGGCCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: IPPEVSFQDRANHILLEVTASTS*SAGHPP
Trigger: AGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGT...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp CAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCGTCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: QLLDSAVVISKNSIVQGRRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...ACGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTTTAGCATCTTTTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLLELGHVQPDEALFSIFCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...AAAGATGCTAAAAAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp CTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LAINGLPFSICQPALIKQCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...CTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCCAGGCTCGTTTAGCTaGACGAGCAGTACAGACAGG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLPGSFS*TSSTDR
Trigger: CCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAGGGCACCAGCGGGCCTaGCTAATTTTTGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTGHQRA*LIFVFL
Trigger: TAAAAATACAAAAATTAGCCAGGCCCGCTGGTGCCC...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCAGGCTGGAGTGCAGTaGCGTGATTTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLQAGVQ*RDFSSL
Trigger: CAGTGAGCTGAAATCACGCCACTGCACTCCAGCCTG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCAACAAAATGCAATATaGGACCCTGGACCAGACAAA +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLQQNAI*DPGPDK
Trigger: TTTGTCTGGTCCAGGGTCCCATATTGCATTTTGTTG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGATCTTGGTTTCCAGTaGCATCAAGAAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLDLGFQ*HQETTW
Trigger: CCAAGTTGTTTCTTGATGCCACTGGAAACCAAGATC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCTTGGGTAACCAACTaGCCTATTCAAACTATTTCT +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSWVTN*PIQTIS
Trigger: AGAAATAGTTTGAATAGGCCAGTTGGTTACCCAAGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTAAGCCTTTCCCCAGCTaGAGAATAAATAAACTACGT +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCKPFPS*RINKLR
Trigger: ACGTAGTTTATTTATTCTCCAGCTGGGGAAAGGCTT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR TCA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTGACAACAGCCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALTTAC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGCTGACAACAGCCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: PHQGNIERESGRMTTYEQLTTAC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAG...CTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLSSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp TTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: FRQYGYGSSPKLPASAAASSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...CGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKLLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATGGTCCCAGAGCAGCGTaGTGTTGTGCCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDGPRAA*CCAFAW
Trigger: CCAAGCAAAGGCACAACATCACGCTGCTCTGGGACC...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTTTGGGAGATGCTAGATaGAAGATACATGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCLGDAR*KIHGNF
Trigger: AAAATTCCCATGTATCTTTCATCTAGCATCTCCCAA...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCTCACTGGCCAAATCTaGGCCAATTTGAGCAACCAA +
Preference number: 4 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPLTGQI*ANLSNQ
Trigger: TTGGTTGCTCAAATTGGCTCAGATTTGGCCAGTGAG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGTTGAGATTACAGGTGTaGGATACTGCACCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLLRLQV*DTAPVF
Trigger: AAAAACAGGTGCAGTATCTCACACCTGTAATCTCAA...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGCAACCTCCACCTCCTaGGCTCCAGTTATATTCCCA +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLATSTS*APVIFP
Trigger: TGGGAATATAACTGGAGCTCAGGAGGTGGAGGTTGC...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGTTCCATTGCTGTCCCTaGATTGCCCAGTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLFHCCP*IAQFCS
Trigger: GGAGCAGAACTGGGCAATTCAGGGACAGCAATGGAA...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAGGATGACCACATATGAGCAGGCCAAGTCTGTGCTTTaGATTGACATCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: PHQGNIERESGRMTTYEQAKSVL*IDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAAGCACAGACTTGGC...CTGCTCATATGTGGTCATCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTAGCTGTGTTCTTAGCTaGCATACTTCTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASSCVLS*HTSELP
Trigger: AGGAAGCTCAGAAGTATGGCAGCTAAGAACACAGCT...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAGCTGTGTTCTTAGCTaGCATACTTCTGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEASCVLS*HTSELP
Trigger: AGGAAGCTCAGAAGTATGGCAGCTAAGAACACAGCT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAGCTTCCTAATGTCTaGGATGTTGGTCTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSQLPNV*DVGLLK
Trigger: CTTCAAAAGACCAACATCGCAGACATTAGGAAGCTG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAACACCACAACAAAATaGAATATGGGACCCTGGACC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEANTTTK*NMGPWT
Trigger: GGTCCAGGGTCCCATATTGCATTTTGTTGTGGTGTT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTGTCTTGGCAAAAATaGAGATCCTCAATCATATCA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLSWQK*RSSIIS
Trigger: TGATATGATTGAGGATCTGCATTTTTGCCAAGACAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTGTCTTGGCAAAAATaGAGATCCTCAATCATATCA +
Preference number: 4 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALSWQK*RSSIIS
Trigger: TGATATGATTGAGGATCTGCATTTTTGCCAAGACAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGAGCTGAGCCTGGGATaGTATGGAAGTAAAAGATAT +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPELSLG*YGSKRY
Trigger: ATATCTTTTACTTCCATAGCATCCCAGGCTCAGCTC...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCCCACTGAGAAGATCTaGACTTGCTGCAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSPTEKI*TCCRSH
Trigger: ATGGGACCTGCAGCAAGTGCAGATCTTCTCAGTGGG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAATCATTCACTGAGCTaGATACTTGTGATTTGTACA +
Preference number: 4 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRNHSLS*ILVICT
Trigger: TGTACAAATCACAAGTATGCAGCTCAGTGAATGATT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCAACACCTTACTTTTTaGTTTATCATTCCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGQHLTF*FIIPCV
Trigger: CACACACGGAATGATAAAGCAAAAAGTAAGGTGTTG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGCGTCCTTGCAATCAATaGTCTTCCCTTTTCCATCTG +
Preference number: 4 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKRPCNQ*SSLFHL
Trigger: CAGATGGAAAAGGGAAGACCATTGATTGCAAGGACG...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTATCTTGTCACTTATCTaGACATCCCCCAGGTTTTCG +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAILSLI*TSPRFS
Trigger: CGAAAACCTGGGGGATGTCCAGATAAGTGACAAGAT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp GGCCACATTGGAGGTCATGATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GHIGGHDEDGVLAINGLPFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...GGGAAGACCATTGATTGCAAGGACGCCATCTTCATCATGACCTCCAATGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACAACAAAATGCAATATaGGACCCTGGACCAGACAAA +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTQQNAI*DPGPDK
Trigger: TTTGTCTGGTCCAGGGTCCCATATTGCATTTTGTTG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAATACTGCACACAGGCTaGTTACTAGCTGACTTAACT +
Preference number: 4 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTILHTG*LLADLT
Trigger: AGTTAAGTCAGCTAGTAACCAGCCTGTGTGCAGTAT...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAAAACAAAAGAAATCTaGGTCTCACCTTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSKTKEI*VSPCCI
Trigger: AATGCAGCAAGGTGAGACCCAGATTTCTTTTGTTTT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAAAACAAAAGAAATCTaGGTCTCACCTTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQKTKEI*VSPCCI
Trigger: AATGCAGCAAGGTGAGACCCAGATTTCTTTTGTTTT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTCTTCCTCCGGATCGCTaGGAGAGAGCTCTTTATAAT +
Preference number: 4 (lower is better)
Translates to: SSNSCSMMVSTSGWALSTLPPDR*ERALYN
Trigger: ATTATAAAGAGCTCTCTCCCAGCGATCCGGAGGAAG...AGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS-3UTR CCA 90 bp ATTCTTTTCCGTTATGAGCTCCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAACTTACTCCTTTTCCTaGCCCTCAGCCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ILFRYELPIKETLRERVATYSFS*PSASGS
Trigger: GGACCCTGAGGCTGAGGGCCAGGAAAAGGAGTAAGT...TGCCACTCTCTCTCTCAATGTTTCCTTGATGGGGAGCTCATAACGGAAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPSCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp CAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACAGCTGCCTCCTTGAAGTTCTTTaGGATGGTGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: QSMVFPFPSVSRPSSNSCLLEVL*DGDLVT
Trigger: AGTGACAAGATCACCATCTCAAAGAACTTCAAGGAG...GCAGCTGTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR TCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGCGATGTTGGTCTTTTaGAGGAGGCCCCCACAGAGC +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLAMLVF*RRPPQS
Trigger: GCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTTACCCAAGGGACTTTaGTTCCTGGCCCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSLPKGL*FLAPFS
Trigger: AGAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGTTACCCAAGGGACTTTaGTTCCTGGCCCCATTCTCT +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLLPKGL*FLAPFS
Trigger: AGAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAA...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGTGTGTGTAGTTATCTaGAATACTGGCAAACCAAAT +
Preference number: 4 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLVCVVI*NTGKPN
Trigger: ATTTGGTTTGCCAGTATTTCAGATAACTACACACAC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp GGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCTGCCAAAAGCACATCTGTTTCTGCTaGCTTCTTGCATATTGTTGG +
Preference number: 4 (lower is better)
Translates to: GMEEWIPNIAALQMPCQKHICFC*LLAYCW
Trigger: CCAACAATATGCAAGAAGTCAGCAGAAACAGATGTG...CTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR TCA 90 bp CAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTCCCAACATGTACTGCAGCAGAATaGAGCAAAGCACATCTGTTT +
Preference number: 4 (lower is better)
Translates to: QWNMVVASPGGWKSGFPTCTAAE*SKAHLF
Trigger: AAACAGATGTGCTTTGCTTCATTCTGCTGCAGTACA...TGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR GCA 90 bp TCCAGCCTGATGAAGCCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTGCTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLMKPFLASLCIYLAVCSWPMM*SFSRCS
Trigger: GGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGA...GCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAGGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: PAHRLLPAGSPHGVLPHVFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...AACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR GCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCATCTGTCATATGCCTaGACTGTGCCAGGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLHLSYA*TVPGSV
Trigger: CACAGAACCTGGCACAGTGCAGGCATATGACAGATG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGATCTGGGTCTCACCTTaGTGCATTGTCTCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLIWVSP*CIVSEL
Trigger: GAGCTCTGAGACAATGCAGCAAGGTGAGACCCAGAT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAACCTGACACTGAGCCTTaGATTGCTAAAATAAACCTT +
Preference number: 4 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEPDTEP*IAKINL
Trigger: AAGGTTTATTTTAGCAATGCAAGGCTCAGTGTCAGG...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTGACACTGAGCCTTaGATTGCTAAAATAAACCTT +
Preference number: 4 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKPDTEP*IAKINL
Trigger: AAGGTTTATTTTAGCAATGCAAGGCTCAGTGTCAGG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCTTCATCCTCATTGTCACTATTTCAGCAGTCTGTTGACTATCTCAAATTAGAACACGTCCAACATGGCTaGCGCGGCGCGTTCGAAGAC +
Preference number: 4 (lower is better)
Translates to: PSSSLSLFQQSVDYLKLEHVQHG*RGAFED
Trigger: GTCTTCGAACGCGCCGCGGCAGCCATGTTGGACGTG...TTCTAATTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCAGCCGCGAGGCATTTaGTATCGAAGCGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLQPRGI*YRSVLP
Trigger: AGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSIISKV*ISPSSK
Trigger: CTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGAT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAAACGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SLQSMVFPFPSVSRPSSNASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...GTTTGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTGTTGTGCCTTTGCTTaGCTCTCTTGGCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSCCAFA*LSWPRS
Trigger: ACTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCTTCTCAGGGTGCAGTaGTGCCCGGATGTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLLRVQ*CPDVQS
Trigger: AGACTGGACATCCGGGCACCACTGCACCCTGAGAAG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGTGGGCTTGAAACATTaGCTGGTCTGTGAAATGCCC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSVGLKH*LVCEMP
Trigger: GGGCATTTCACAGACCAGCCAATGTTTCAAGCCCAC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCATCATCGGGAAAACTaGCAAAATTTGAATGTCCGT +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSHHREN*QNLNVR
Trigger: ACGGACATTCAAATTTTGCCAGTTTTCCCGATGATG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCTTCTGTGGTTGTCTTaGCAAAAATGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASLLWLS*QKCRSS
Trigger: TGAGGATCTGCATTTTTGCCAAGACAACCACAGAAG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTACAGTATCACTTCTGTaGTTGTCTTGGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPTVSLL*LSWQKC
Trigger: GCATTTTTGCCAAGACAACCACAGAAGTGATACTGT...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGATCTTGGTTTCCAGTaGCATCAAGAAACAACTTGG +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASDLGFQ*HQETTW
Trigger: CCAAGTTGTTTCTTGATGCCACTGGAAACCAAGATC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGCCAGGTTCTGTGAATaGCTGAACAGCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSARFCE*LNSLAS
Trigger: AGATGCCAAGCTGTTCAGCCATTCACAGAACCTGGC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTTTTCCAGTTTCTTCTTaGGTAACCAACTGGCCTATT +
Preference number: 4 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPFPVSS*VTNWPI
Trigger: AATAGGCCAGTTGGTTACCCAAGAAGAAACTGGAAA...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGGCCACCACCATGCCTaGCCATCAATCTTTTACAAG +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSGHHHA*PSIFYK
Trigger: CTTGTAAAAGATTGATGGCCAGGCATGGTGGTGGCC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAAGCACCATCATGCCTaGCTAATTTTGGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQKHHHA*LILVFL
Trigger: TAAAAATACCAAAATTAGCCAGGCATGATGGTGCTT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGTCTGTGCTTTGCATTaGCATCTGCACCTTCTGACA +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLVCALH*HLHLLT
Trigger: TGTCAGAAGGTGCAGATGTCAATGCAAAGCACAGAC...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp GACGATCTCATTGATCCGTCCCAGAAACTCATCCCTCCGGAAGTGAGCTTTCAGTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DDLIDPSQKLIPPEVSFQSCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...CTGAAAGCTCACTTCCGGAGGGATGAGTTTCTGGGACGGATCAATGAGATCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR TCA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: VISALPSGLLVSSLLTPFSCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR TCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAGTTCTTTGAGATGGTaGTCTTGTCACTTATCTGGA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEASSLRW*SCHLSG
Trigger: TCCAGATAAGTGACAAGATCACCATCTCAAAGAACT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp TATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCAGCAGTTCTGGGCTTTTaGGTAGCTGCTTGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: YIWLSAWPALFFLFQMIPAVLGF*VAACLS
Trigger: ACTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGC...TGGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR TCA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCTTGGGAGATGCTAGATaGAAGATACATGGGAATTTT +
Preference number: 4 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSLGDAR*KIHGNF
Trigger: AAAATTCCCATGTATCTTTCATCTAGCATCTCCCAA...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCACGCCCGGCCAGAAGTaGTTCTTAATTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSTPGQK*FLIRFL
Trigger: AAGGAACCTAATTAAGAATCACTTCTGGCCGGGCGT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCGCCTGGCAAACATGGTaGAACCCCGTCTTTACTAAA +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSAWQTW*NPVFTK
Trigger: TTTAGTAAAGACGGGGTTTCACCATGTTTGCCAGGC...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp ATTCTTTTCCGTTATGAGCTCCCCATCAAGGAAACATTGAGAGAGAGAGTGGCAAGCCTGCTGACTTCTTaGATATTGTTGGCACGGGCA +
Preference number: 4 (lower is better)
Translates to: ILFRYELPIKETLRERVASLLTS*ILLARA
Trigger: TGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCT...TGCCACTCTCTCTCTCAATGTTTCCTTGATGGGGAGCTCATAACGGAAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCGTGCAGCCTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LDSAVVISKNSIVQGRAAFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...GGCTGCACGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR GCA 90 bp ATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCACAGCATTGGGGCACTaGTTCAACTTCTTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: IYLAVCLASSVFPIPDDPTALGH*FNFLVS
Trigger: GCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGT...GGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR GCA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTCTAGGATCAGTGTTTaGTGGGAAATTATCCATTTC +
Preference number: 4 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLSRISV*WEIIHF
Trigger: GAAATGGATAATTTCCCAGCAAACACTGATCCTAGA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCTTCTTGCATATTGTTaGCACGGGCAGCTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLLLAYC*HGQLPT
Trigger: TGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLAMALS*PMMCSF
Trigger: AAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTTGTCACTTATCTGGACATCCAACTTCTTGGTCAGCTaGCCACCCTCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TFSLKFFEMVILSLIWTSNFLVS*PPSSWP
Trigger: TGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTT...GGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCATCATCGGGAAAACTaGCAAAATTTGAATGTCCGT +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASHHREN*QNLNVR
Trigger: ACGGACATTCAAATTTTGCCAGTTTTCCCGATGATG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTACAGTATCACTTCTGTaGTTGTCTTGGCAAAAATGC +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEATVSLL*LSWQKC
Trigger: GCATTTTTGCCAAGACAACCACAGAAGTGATACTGT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTAGAGACATGTCAATGTaGACTGATCCATTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VISALPSGLLVSSLLTPFRDMSM*TDPFFS
Trigger: GGAAAAGAATGGATCAGTCCACATTGACATGTCTCT...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
3UTR CAA 72 bp ATACTGTTAGGACATGCTTCCATTACCCAAGGGACTTaGATTCCTGGCCCCATTCTCTGCTTCCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: ILLGHASITQGT*IPGPILCFLKD
Trigger: GTCTTTCAGGAAGCAGAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAATGGAAGCATGTCCTAACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 72 bp CTGGTCTCATGTATTCTAGGATCCTCAATAAGGAATTaGGGGCCGGGTACAGTCGTTGACGCTTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: LVSCILGSSIRN*GPGTVVDACNL
Trigger: GAGATTACAAGCGTCAACGACTGTACCCGGCCCCAAATTCCTTATTGAGGATCCTAGAATACATGAGACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGATCTATTTTGGGGGTTaGGTGATGGCTATAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLIYFGG*VMAIGV
Trigger: CACTCCTATAGCCATCACTCAACCCCCAAAATAGAT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGCAACCTCCACCTCCTaGGCTCCAGTTATATTCCCA +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLATSTS*APVIFP
Trigger: TGGGAATATAACTGGAGCTCAGGAGGTGGAGGTTGC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAAGATCTGCACTTGCTaGAGGTCCCATCCACTCACC +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLKICTC*RSHPLT
Trigger: GGTGAGTGGATGGGACCTGCAGCAAGTGCAGATCTT...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCTAGGATCAGTGTTTaGTGGGAAATTATCCATTTC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPSRISV*WEIIHF
Trigger: GAAATGGATAATTTCCCAGCAAACACTGATCCTAGA...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCAACACCTTACTTTTTaGTTTATCATTCCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASQHLTF*FIIPCV
Trigger: CACACACGGAATGATAAAGCAAAAAGTAAGGTGTTG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGGCTTCTCTTGGTACTTaGCTTCAGAAGTCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLASLGT*LQKSSE
Trigger: TTCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGC...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTTCCTTGTTGACGAGTTaGATGAGCTCCGAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLSLLTS*MSSEWQ
Trigger: CTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGA...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCCCATGTTGGTCAGGATaGTCTCAATCTCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSPCWSG*SQSLDL
Trigger: GAGATCAAGAGATTGAGACCATCCTGACCAACATGG...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR GCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGGTGTCCAGACCCTCTaGTTTGTGACTAACATGCAG +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLGVQTL*FVTNMQ
Trigger: CTGCATGTTAGTCACAAAGCAGAGGGTCTGGACACC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTAATCATTCACTGAGCTaGATACTTGTGATTTGTACA +
Preference number: 4 (lower is better)
Translates to: RERGGYRLNCRTICTWASNHSLS*ILVICT
Trigger: TGTACAAATCACAAGTATGCAGCTCAGTGAATGATT...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATTTCCGCTGCTTCTCTTaGTACTTGGCTTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDFRCFS*YLASEV
Trigger: GACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAA...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTTGTCACTTATCTGGACATCCGATGGTGAGCACATCTaGATGGGCCTTGTCTACTTC +
Preference number: 4 (lower is better)
Translates to: TFSLKFFEMVILSLIWTSDGEHI*MGLVYF
Trigger: GAAGTAGACAAGGCCCATCCAGATGTGCTCACCATC...GGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CCA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTAAGCACCATCATGCCTaGCTAATTTTGGTATTTTTA +
Preference number: 4 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAKHHHA*LILVFL
Trigger: TAAAAATACCAAAATTAGCCAGGCATGATGGTGCTT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAGCCTCCCAAATAGCTaGAATTACCGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLSLPNS*NYRHVP
Trigger: TGGCACATGCCGGTAATTCCAGCTATTTGGGAGGCT...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CTTGCCACAGAGTTTTCCAACGGACAAAGGAAGAAGCTTTCTGCTTGGGGATGTAAGAAGCTTTCTGCTTaGGGATGTTTTCTAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LATEFSNGQRKKLSAWGCKKLSA*GCFLSL
Trigger: GAGACTTAGAAAACATCCCCAAGCAGAAAGCTTCTT...ACATCCCCAAGCAGAAAGCTTCTTCCTTTGTCCGTTGGAAAACTCTGTGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR TCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLSCKHC*NHLQGL
Trigger: CAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGA...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR TCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAAATGTGAGGAAGCCTaGAACATCTTGTGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLKCEEA*NILWCQ
Trigger: CTGGCACCACAAGATGTTTCAGGCTTCCTCACATTT...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CTAAATAATCAATGCCTGGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGAACTAAATAATCAATaGCTGGCAGCTCAATGGAAT +
Preference number: 4 (lower is better)
Translates to: LNNQCLAAQWNMVVASPGELNNQ*LAAQWN
Trigger: ATTCCATTGAGCTGCCAGGCATTGATTATTTAGTTC...CCCAGGGGATGCCACTACCATATTCCATTGAGCTGCCAGGCATTGATTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CCA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCAGGATCAGTGTTTGCTaGGAAATTATCCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSRISVC*EIIHFL
Trigger: GAGGAAATGGATAATTTCCCAGCAAACACTGATCCT...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp CCTTCATCCTCATTGTCACTATTTCAGCAGTCTGTTGACTATCTCAAATTAGAATCAGCCTCAGGGTCCTaGCCTGCCACTTTCATATCT +
Preference number: 4 (lower is better)
Translates to: PSSSLSLFQQSVDYLKLESASGS*PATFIS
Trigger: AGATATGAAAGTGGCAGGCCAGGACCCTGAGGCTGA...TTCTAATTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp CTGATGAAGCCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTGCTTGGCCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LMKPFLASLCIYLAVCLAIYLAV*LASSVF
Trigger: AAAAACAGAGCTGGCCAAGCAGACAGCCAAATATAT...GGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CCA 90 bp ACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTTGTCACTTATCTGGACATCCTTTGCTTGGCTCTCTTaGCCCAGAAGTTTAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TFSLKFFEMVILSLIWTSFAWLS*PRSLVP
Trigger: AGGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAA...GGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
3UTR CAA 72 bp GGAGGCACTAAGAATAGCACAGTATCACTTCTGTGGTaGTCTTGGCAAAAATGCAGATCCTCAATCATATCA +
Preference number: 4 (lower is better)
Translates to: GGTKNSTVSLLW*SWQKCRSSIIS
Trigger: TGATATGATTGAGGATCTGCATTTTTGCCAAGACAACCACAGAAGTGATACTGTGCTATTCTTAGTGCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR GCA 90 bp CCTTCATCCTCATTGTCACTATTTCAGCAGTCTGTTGACTATCTCAAATTAGAAGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCA +
Preference number: 4 (lower is better)
Translates to: PSSSLSLFQQSVDYLKLEVQPSL*FALTSA
Trigger: TGCAGATGTCAATGCAAAGCACAGACTTGGCTGGAC...TTCTAATTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR GCA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLFLASL*IYLAVC
Trigger: GCAGACAGCCAAATATATGCACAAAGATGCTAAAAA...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCTATTCTCAGGAAGGTaGCCATTGGCTTTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLLFSGR*PLAFLV
Trigger: TACAAGAAAAGCCAATGGCCACCTTCCTGAGAATAG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR TCA 90 bp CCTTCATCCTCATTGTCACTATTTCAGCAGTCTGTTGACTATCTCAAATTAGAACATTCTTTTCCGTTATaGGCTCCCCATCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: PSSSLSLFQQSVDYLKLEHSFPL*APHQGN
Trigger: GTTTCCTTGATGGGGAGCTCATAACGGAAAAGAATG...TTCTAATTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAGGATCAGTGTTTGCTaGGAAATTATCCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLRISVC*EIIHFL
Trigger: GAGGAAATGGATAATTTCCCAGCAAACACTGATCCT...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTTTTCCAGTTTCTTCTTaGGTAACCAACTGGCCTATT +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLFPVSS*VTNWPI
Trigger: AATAGGCCAGTTGGTTACCCAAGAAGAAACTGGAAA...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CCA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTTCTTGGGTAACCAACTaGCCTATTCAAACTATTTCT +
Preference number: 4 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLSWVTN*PIQTIS
Trigger: AGAAATAGTTTGAATAGGCCAGTTGGTTACCCAAGA...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 72 bp CCAGACAAAGGACATCATCGGGAAAACTGGCAAAATTaGAATGTCCGTAGATTAGTTAGTAGTAGTTTATCA +
Preference number: 4 (lower is better)
Translates to: PDKGHHRENWQN*NVRRLVSSSLS
Trigger: TGATAAACTACTACTAACTAATCTACGGACATTCAAATTTTGCCAGTTTTCCCGATGATGTCCTTTGTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
3UTR CAA 72 bp TATTTATTGCTAGTGGCTTTACCACCTTCATCCTCATaGTCACTATTTCAGCAGTCTGTTGACTATCTCAAA +
Preference number: 4 (lower is better)
Translates to: YLLLVALPPSSS*SLFQQSVDYLK
Trigger: TTTGAGATAGTCAACAGACTGCTGAAATAGTGACAATGAGGATGAAGGTGGTAAAGCCACTAGCAATAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS CCA 90 bp CCACCAGCGCTGCGGCCAGGGCGCACATGCCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGTCCTGTCCTGGGAGTGTTTCTTCGG +
Preference number: 5 (lower is better)
Translates to: PPALRPGRTCPVRPC*GPRSSCPVLGVFLR
Trigger: CCGAAGAAACACTCCCAGGACAGGACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCGCAGCGCTGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS GCA 90 bp GAACCACCAGCGCTGCGGCCAGGGCGCACATGCCCAGTCCGGCCCTaGTGGGGACCCCGTTCCAGCTGTCCTGTCCTGGGAGTGTTTCTT +
Preference number: 5 (lower is better)
Translates to: EPPALRPGRTCPVRP*WGPRSSCPVLGVFL
Trigger: AAGAAACACTCCCAGGACAGGACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS TCA 90 bp GTGGGTCCCCAGCACCCACTGTGGCGATGGCGCTCTCCTGGCCAATaGTGTGCTCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: VGPQHPLWRWRSPGQ*CAPLVAAPGGSGAA
Trigger: AGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGGGGACCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS TCA 90 bp ATCTTGACAGCTGCTTCGATAACCCCGTGGTGCCGGCCCCTGTGCTaGCCACGTCCAACATGGCTGCCGCGGCGCGTTCGAAGACGCCGC +
Preference number: 5 (lower is better)
Translates to: ILTAASITPWCRPLC*PRPTWLPRRVRRRR
Trigger: GCGGCGTCTTCGAACGCGCCGCGGCAGCCATGTTGGACGTGGTCAGCACAGGGGCCGGCACCACGGGGTTATCGAAGCAGCTGTCAAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000543042.6
ENST00000646117.1
CDS GCA 90 bp TCCCCAGCACCCACTGTGGCGATGGCGCTCTCCTGGCCAATGATGTaGTCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SPAPTVAMALSWPMM*SFSRCSRGKRRRSS
Trigger: TGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS CCA 90 bp CCTGTCCTGGGAGTGTTTCTTCGGGACCAGGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGGTATCGAAGCGTCCTCCCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: PVLGVFLRDQEGVPK*QPRGIWYRSVLPGA
Trigger: GGCGCCAGGGAGGACGCTTCGATACCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTCCTGGTCCCGAAGAAACACTCCCAGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS-3UTR CAA 90 bp GCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTGCGAACAGGGTGGAGTaGCGCACTACCTCACGGGAG +
Preference number: 5 (lower is better)
Translates to: AMHLPCVHAQLHSVPTCGANRVE*RTTSRE
Trigger: CTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCGC...ACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS CCA 90 bp GCGGGGAGTCCTAGCCATCTCCTGAACTCCAGGGCACTTGTCCACTaGTTTGTGATGTGCCGGCTTGCACCGTCCTGTCCCCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: AGSPSHLLNSRALVH*FVMCRLAPSCPPSS
Trigger: GGAAGATGGGGGACAGGACGGTGCAAGCCGGCACATCACAAACCAGTGGACAAGTGCCCTGGAGTTCAGGAGATGGCTAGGACTCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCAGCCGCGAGGCATTaGGTATCGAAGCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAAAARH*VSKRPP
Trigger: GGGAGGACGCTTCGATACCAAATGCCTCGCGGCTGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GGCCACCTCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GHLVSLLELGHVQPDEALFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...AAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp TCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: SMISRRSLGRRFSAWGEGRVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...GCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: PASAAARAVRSRRWPHWRSSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...CCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTGGAGACCCAATAAACTTGGCGCGAACAGGGTGGAGTaGCGCACTACCTCACGGGAG +
Preference number: 5 (lower is better)
Translates to: LATLLMANVAWWRPNKLGANRVE*RTTSRE
Trigger: CTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCGC...GCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCAGCCGCGAGGCATTaGGTATCGAAGCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQAAARH*VSKRPP
Trigger: GGGAGGACGCTTCGATACCAAATGCCTCGCGGCTGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCGCAGCCGCGAGGCATTaGGTATCGAAGCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSAAARH*VSKRPP
Trigger: GGGAGGACGCTTCGATACCAAATGCCTCGCGGCTGC...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp TCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: SGCSGARMSSLRVLLSLSHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...CGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: SKASCLSCSACCAISSLASSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...GGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TCGATGATCTCCAGACGCAGCTTGGGGAGGCGCTTCTCAGCCTGGGGTGAGGGCCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: SMISRRSLGRRFSAWGEGLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...GCCCTCACCCCAGGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGATCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PAHRLLPAGSPHGVLPHVISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...AACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCCATCCCTCCTTGCCTaGAAGGGGGTGGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVPSLLA*KGVERQ
Trigger: CTGCCTTTCCACCCCCTTCAAGGCAAGGAGGGATGG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCATCCCTCCTTGCCTaGAAGGGGGTGGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPSLLA*KGVERQ
Trigger: CTGCCTTTCCACCCCCTTCAAGGCAAGGAGGGATGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGCGAACAGGGTGGAGTaGCGCACTACCTCACGGGAG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQANRVE*RTTSRE
Trigger: CTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCGC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000543042.6
CDS TCA 90 bp AAGGGGAAAGTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTaGTTCCAGGGTCAGCAAGGGTCAGTTTCCATACCCGTACTCCTG +
Preference number: 5 (lower is better)
Translates to: KGKVAARQPFAVANR*FQGQQGSVSIPVLL
Trigger: CAGGAGTACGGGTATGGAAACTGACCCTTGCTGACCCTGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGACTTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CAA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTGCAGCCGCGAGGCATTaGGTATCGAAGCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIAAARH*VSKRPP
Trigger: GGGAGGACGCTTCGATACCAAATGCCTCGCGGCTGC...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp ATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTCAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: MHLPCVHAQLHSVPTCGLNRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...GAGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTCAGCCTGCTGACTTCTaGCATATTGTTGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSQPADF*HIVGTG
Trigger: GCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTG...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGACCTGTACCACACTGTaGTTTCGGTTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWTCTTL*FRLMAA
Trigger: GGCAGCCATCAACCGAAACAACAGTGTGGTACAGGT...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATCTGCCACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: ICHLAVPEQRDVVPLLGSGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...AGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGTGGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAACACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: LQRVLCDLVAGHIGGHDEHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...TTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLIGCCQLVHHTAFYLMFISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...AAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: RLRLISKASCLSCSACCASSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...CGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGATGCGCAGGCTGGTCTaGAACTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVMRRLV*NSWAQV
Trigger: CACTTGAGCCCAGGAGTTCAAGACCAGCCTGCGCAT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGGCGAACAGGGTGGAGTaGCGCACTACCTCACGGGAG +
Preference number: 5 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLANRVE*RTTSRE
Trigger: CTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCGC...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGGGGCTGCTGACTTCTaGCATATTGTTGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAGAADF*HIVGTG
Trigger: GCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCCC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR CAA 90 bp ATCGCTGGGAGAGAGCTCTTTATAATGCCAGGCAGACTTCACTGCACAGCTGTCGAGTCCGGGGTGGGCTaGATGTGGGTCCCCAGCACC +
Preference number: 5 (lower is better)
Translates to: IAGRELFIMPGRLHCTAVESGVG*MWVPST
Trigger: GGTGCTGGGGACCCACATCAAGCCCACCCCGGACTC...GACAGCTGTGCAGTGAAGTCTGCCTGGCATTATAAAGAGCTCTCTCCCAGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVANRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVNRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRNRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAGCCTGCTGACTTCTaGCATATTGTTGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQPADF*HIVGTG
Trigger: GCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCAATCATCTCCAAGGTTaGGATCAGCCCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVNHLQG*DQPQQQ
Trigger: TTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATT...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp AGCCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: SHAPSLCPRSAPLCPHLWLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...CCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PASAAARAVRSRRWPHWRQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...CCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGACTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: FLPQLQRVLCDLVAGHIGLCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...TCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: AAASWFTTRRSTSCLMERRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...CCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTCAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAAQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TCAGGGTGCAGTGGTGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: SGCSGARMSSLRVLLSLSLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...CGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCACCACTGCACCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp ACCTCGCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TSRSQSSVMLCLCLALLAGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...GGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGCGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VFGNTVTAHLQSFLPQLQISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...CTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAACGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: LQRVLCDLVAGHIGGHDERVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...TTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVARVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTGCGATGTTGGTCTTTaGAAGGAGGCCCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVCDVGL*KEAPTE
Trigger: CTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCATGCGCAGGCTGGTCTaGAACTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVMRRLV*NSWAQV
Trigger: CACTTGAGCCCAGGAGTTCAAGACCAGCCTGCGCAT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CCATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCCCCATCAAGGAAACATaGAGAGAGAGAGTGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PCTFPVSTLSSTLSPPVVPIKET*RERVAG
Trigger: TCCTGCCACTCTCTCTCTCAATGTTTCCTTGATGGG...GACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS TCA 90 bp TTCTTGCATATTGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCTaGAGAGAAAGGGGGCACTGGTCAGATCCGCGGCCAGGACATACC +
Preference number: 5 (lower is better)
Translates to: FLHIVGTGSFQQGCI*RERGHWSDPRPGHT
Trigger: GGTATGTCCTGGCCGCGGATCTGACCAGTGCCCCCTTTCTCTTCAGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539148.3
ENST00000544683.5
ENST00000642288.1
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGCAGCCGCGAGGCATTaGGTATCGAAGCGTCCTCCC +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAAAARH*VSKRPP
Trigger: GGGAGGACGCTTCGATACCAAATGCCTCGCGGCTGC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLTSCI*LARAAS
Trigger: GGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLTSCI*LARAAS
Trigger: GGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACCTGTACCACACTGTaGTTTCGGTTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTCTTL*FRLMAA
Trigger: GGCAGCCATCAACCGAAACAACAGTGTGGTACAGGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTACCTGTACCACACTGTaGTTTCGGTTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVATCTTL*FRLMAA
Trigger: GGCAGCCATCAACCGAAACAACAGTGTGGTACAGGT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CCTCTGCAGGGGGTTGGCTCCTCCATCAAGCAGCTCCTTGACAGTGCGGTAGTCTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: PLQGVGSSIKQLLDSAVVLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...GACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp GAGCACCACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: EHHSIGALLQLLGQLATLRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...GAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTCTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: MHLPCVHAQLHSVPTCGLLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...GAGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: QVFGNTVTAHLQSFLPQLKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...CAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: RLRLISKASCLSCSACCATSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...CGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PASAAARAVRSRRWPHWRRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...CCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: QRVLCDLVAGHIGGHDEDRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...ATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRSSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACCATCCCTCCTTGCCTaGAAGGGGGTGGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTPSLLA*KGVERQ
Trigger: CTGCCTTTCCACCCCCTTCAAGGCAAGGAGGGATGG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCCCACAGAGCTGAGCTaGCTTGGTTATCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSPTELS*LGYLGL
Trigger: CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCTGCGATGTTGGTCTTTaGAAGGAGGCCCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSCDVGL*KEAPTE
Trigger: CTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCA...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGTCTGTGAAATGCCCTaGGGGGACGGTGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPVCEMP*GDGVQT
Trigger: GGTCTGGACACCGTCCCCCAAGGGCATTTCACAGAC...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACAGTCTGTGAAATGCCCTaGGGGGACGGTGTCCAGACC +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTVCEMP*GDGVQT
Trigger: GGTCTGGACACCGTCCCCCAAGGGCATTTCACAGAC...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCAGGCATGAGACCTGCTaGAACTGGAGGTGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVRHETC*NWRWRL
Trigger: CAACCTCCACCTCCAGTTCAAGCAGGTCTCATGCCT...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGGCATGAGACCTGCTaGAACTGGAGGTGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRHETC*NWRWRL
Trigger: CAACCTCCACCTCCAGTTCAAGCAGGTCTCATGCCT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCACACTGCTGACTTCTaGCATATTGTTGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVHTADF*HIVGTG
Trigger: GCCCGTGCCAACAATATGCAAGAAGTCAGCAGTGTG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340729.9
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCCCTGCCCAGCTTCTaGACTGAGCATCATTCTTTG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAALPSF*TEHHSL
Trigger: CAAAGAATGATGCTCAGTCAAGAAGCTGGGCAGGGC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCCCTGCCCAGCTTCTaGACTGAGCATCATTCTTTG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVALPSF*TEHHSL
Trigger: CAAAGAATGATGCTCAGTCAAGAAGCTGGGCAGGGC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS TCA 90 bp GTAAGTCAGTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTaGGGGCACATAGGAGCAGGCAGGTGGCTGCTAGATGGTGTTGCA +
Preference number: 5 (lower is better)
Translates to: VSQLPCHSQGAFIGW*GHIGAGRWLLDGVA
Trigger: TGCAACACCATCTAGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAACTGACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS GCA 90 bp TCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTaGGCTTGGCAATTCAGCTCCAAGTCTGTGCTCTTAGCCATCATG +
Preference number: 5 (lower is better)
Translates to: SCRSWNSDMSSLMKP*AWQFSSKSVLLAIM
Trigger: CATGATGGCTAAGAGCACAGACTTGGAGCTGAATTGCCAAGCGCAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CCA 90 bp CGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTGCGCTTaGCAATTCAGCTCCAAGTCTGTGCTCTTAGCCATCATGCTACAC +
Preference number: 5 (lower is better)
Translates to: RSWNSDMSSLMKPCA*QFSSKSVLLAIMLH
Trigger: GTGTAGCATGATGGCTAAGAGCACAGACTTGGAGCTGAATTGCCAAGCGCAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRTSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVATSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTAGTCTGTGCTTTGCATaGACATCTGCACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSSLCFA*TSAPSD
Trigger: GTCAGAAGGTGCAGATGTCAATGCAAAGCACAGACT...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAATCATCTCCAAGGTTaGGATCAGCCCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVANHLQG*DQPQQQ
Trigger: TTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAATCATCTCCAAGGTTaGGATCAGCCCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRNHLQG*DQPQQQ
Trigger: TTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAACGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: VQGRAALETGAVVQPVVERLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...TTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000536297.1
CDS-3UTR CAA 90 bp GCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTCCTGGCCCTCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ALPSGLLVSSLLTPFPGPRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...AGGGCCAGGAAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: VISALPSGLLVSSLLTPFKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTCCGCTGCTTCTCTaGGTACTTGGCTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLPLLL*VLGFRS
Trigger: ACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LISKASCLSCSACCAISSYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...CGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TCCTTTAGTCGCTGCTCCAGGGGGAAGCGGCGCCGCTCCTCAGCCTCACGCTTCCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SFSRCSRGKRRRSSASRFPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...GAAGCGTGAGGCTGAGGAGCGGCGCCGCTTCCCCCTGGAGCAGCGACTAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVSSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATGGCGTCTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: VLCDLVAGHIGGHDEDGVFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...GACGCCATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GGAGCGGGCGCCATAGTGCACATTGTAGCCGTCGACCAGCACATCTGCCACCTCAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GAGAIVHIVAVDQHICHLKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...GAGGTGGCAGATGTGCTGGTCGACGGCTACAATGTGCACTATGGCGCCCGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVALCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRLCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCACCTCGTGTCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTCTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: ATSCRSWNSDMSSLMKPFLCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...AAAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGACACGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTCAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCGCGTGCTGTGCGATCTCGTCGCTGGCCACATTGGAGGTCATGATGAAGATTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: QRVLCDLVAGHIGGHDEDSSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...ATCTTCATCATGACCTCCAATGTGGCCAGCGACGAGATCGCACAGCACGCGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGGGGAAGGTAAGTCAGTaGCCATGCCACAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKGKVSQ*PCHSQG
Trigger: CCCTTGGCTGTGGCATGGCAACTGACTTACCTTCCC...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTCCTCCTTCAGGTTTaGGGGCTGAGAAGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQFLLQV*GLRRGL
Trigger: AAGACCCCTTCTCAGCCCCAAAACCTGAAGGAGGAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCTTCCTCCTTCAGGTTTaGGGGCTGAGAAGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSFLLQV*GLRRGL
Trigger: AAGACCCCTTCTCAGCCCCAAAACCTGAAGGAGGAA...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTGGCTAAGGTGGGCTaGAAACATTGGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLAKVG*KHWLVC
Trigger: ACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGAATGGCTGAACAGCTaGGCATCTGCCCTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAEWLNS*ASALLE
Trigger: TTCTAAGAGGGCAGATGCCAAGCTGTTCAGCCATTC...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGGAATGGCTGAACAGCTaGGCATCTGCCCTCTTAGAA +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSREWLNS*ASALLE
Trigger: TTCTAAGAGGGCAGATGCCAAGCTGTTCAGCCATTC...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGAGTGTTCCCCTTCCATaGCTGTCCCTGAATTGCCCA +
Preference number: 5 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGSVPLP*LSLNCP
Trigger: TGGGCAATTCAGGGACAGCAATGGAAGGGGAACACT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATTCTTTGCAGTCTCTaGGGGCTGCTGACTTCTTGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAILCSL*GLLTSC
Trigger: GCAAGAAGTCAGCAGCCCCAAGAGACTGCAAAGAAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGACTGAGCATCATTCTTaGCAGTCTCTTGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVTEHHS*QSLGAA
Trigger: AGCAGCCCCAAGAGACTGCAAAGAATGATGCTCAGT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS-3UTR CAA 90 bp CATGCACCTTCCCTGTGTCCACGCTCAGCTCCACTCTGTCCCCACCTGTGGTCTTGTACGATGGATGCCTaGGAGAATGAGGGCTCAATT +
Preference number: 5 (lower is better)
Translates to: HAPSLCPRSAPLCPHLWSCTMDA*ENEGSI
Trigger: AATTGAGCCCTCATTCTCCAAGGCATCCATCGTACA...AGACCACAGGTGGGGACAGAGTGGAGCTGAGCGTGGACACAGGGAAGGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS GCA 90 bp AGCCATCTCCTGAACTCCAGGGCACTTGTCCACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGTCCCCCATCTTCCAAAGAATGGATT +
Preference number: 5 (lower is better)
Translates to: SHLLNSRALVHWFVM*RLAPSCPPSSKEWI
Trigger: AATCCATTCTTTGGAAGATGGGGGACAGGACGGTGCAAGCCGGCACATCACAAACCAGTGGACAAGTGCCCTGGAGTTCAGGAGATGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKNRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPNRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGCAGCTCAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GSSMEYGSGIPWGMEEWINRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...AATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTGAGCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CAA 90 bp TCCCCTGGGGGATGGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCTCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPGGWKSGFPTLLLCKCPLTSCI*LARAAS
Trigger: GGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAG...AGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCCATCCCCCAGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTAGTCTGTGCTTTGCATaGACATCTGCACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVASLCFA*TSAPSD
Trigger: GTCAGAAGGTGCAGATGTCAATGCAAAGCACAGACT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp CACAGCATTGGGGCACTGCTTCAACTTCTTGGTCAGCTGGCCACCCTCCTCATGAATCATCTCCAAGGTTaGGATCAGCCCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: HSIGALLQLLGQLATLLMNHLQG*DQPQQQ
Trigger: TTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATT...CATGAGGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTGCCCCAATGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTGGCTGTGCCCTCCATCAAGCAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: VAVPSIKQLLDSAVVISKLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...CTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGGCACAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CAA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CTGCTTCTGAGAACAGCAAGTTCTCGCTCCAGAAGCATCAGTCATCCCAAGAACAAGGCCGTGCAGCCCTaGAAACTGGCGCGGTTGTTC +
Preference number: 5 (lower is better)
Translates to: LLLRTASSRSRSISHPKNKAVQP*KLARLF
Trigger: GAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT...GTTCTTGGGATGACTGATGCTTCTGGAGCGAGAACTTGCTGTTCTCAGAAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CAA 90 bp TCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTTTTTAGCATCTTTTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLLELGHVQPDEALFSIFFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...AAAGATGCTAAAAAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVACFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRCFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCTTCCGCTGCTTCTCTaGGTACTTGGCTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSLPLLL*VLGFRS
Trigger: ACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAAG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCTTCCGCTGCTTCTCTaGGTACTTGGCTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQLPLLL*VLGFRS
Trigger: ACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAAG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCTTCCGCTGCTTCTCTaGGTACTTGGCTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGLPLLL*VLGFRS
Trigger: ACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAAG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCTGCTCATAGGCTGCTGCCAGCTGGTTCACCACACGGCGTTCTACCTCATGTTCTTCCGCTGCTTCTCTaGGTACTTGGCTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: PAHRLLPAGSPHGVLPHVLPLLL*VLGFRS
Trigger: ACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAAG...AACATGAGGTAGAACGCCGTGTGGTGAACCAGCTGGCAGCAGCCTATGAGCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp TCCAAAGCTTCCTGCCTCAGCTGCAGCGCGTGCTGTGCGATCTCGTCGCTGGCCCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SKASCLSCSACCAISSLAPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...GGCCAGCGACGAGATCGCACAGCACGCGCTGCAGCTGAGGCAGGAAGCTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCACTGCTTCAACTTCTaGGTCAGCTGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: RERGGYRLNCRTICTWASHCFNF*VSWPPS
Trigger: GGAGGGTGGCCAGCTGACCAAGAAGTTGAAGCAGTG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: HPPGFRQYGYGSSPKLPAKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...GGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVATSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCGGTCCCAGAGCAGCGTGATGTTGTGCCTTTGCTTGGCTCTCTTGGCCCAGAAACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: AVPEQRDVVPLLGSLGPETSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...TTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTGGGACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRTSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCTTCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: DVQSASLAVLVDDLQTQLRVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...AAGCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTGGGAAGGTAAGTCAGTaGCCATGCCACAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: RERGGYRLNCRTICTWASGKVSQ*PCHSQG
Trigger: CCCTTGGCTGTGGCATGGCAACTGACTTACCTTCCC...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTTGCGATGTTGGTCTTTaGAAGGAGGCCCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPCDVGL*KEAPTE
Trigger: CTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCA...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGAATCTGGGTCTCACCTaGCTGCATTGTCTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGNLGLT*LHCLRA
Trigger: AGCTCTGAGACAATGCAGCAAGGTGAGACCCAGATT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCAGCAGTCCACCTGCCTaGACCCCTCAGTGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSSSPPA*TPQCSV
Trigger: AACAGAACACTGAGGGGTCAAGGCAGGTGGACTGCT...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGGGGCTGCTGACTTCTaGCATATTGTTGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAGAADF*HIVGTG
Trigger: GCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCCC...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTLTSCI*LARAAS
Trigger: GGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAGTCTGTGCTTTGCATaGACATCTGCACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSLCFA*TSAPSD
Trigger: GTCAGAAGGTGCAGATGTCAATGCAAAGCACAGACT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
CDS-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGAATCATCTCCAAGGTTaGGATCAGCCCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLNHLQG*DQPQQQ
Trigger: TTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATT...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGCCCGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: CPDVQSASLAVLVDDLQTCFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...CGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCCTTCCGCTGCTTCTCTaGGTACTTGGCTTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: HPPGFRQYGYGSSPKLPALPLLL*VLGFRS
Trigger: ACTTCTGAAGCCAAGTACCAAGAGAAGCAGCGGAAG...GGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CGGATGTCCAGTCTGCGAGTCTTGCTGTCCTTGTCGATGATCTCCAGACGCAGCTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: RMSSLRVLLSLSMISRRSYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...GCTGCGTCTGGAGATCATCGACAAGGACAGCAAGACTCGCAGACTGGACATCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: FGNTVTAHLQSFLPQLQRYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...GCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp TTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGCGCTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: FGNTVTAHLQSFLPQLQRSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...GCGCTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQTSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: VFGNTVTAHLQSFLPQLQSSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...CTGCAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCGTGCATTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LLDSAVVISKNSIVQGRAFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...TGCACGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTGCTAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: PRGLYWMVRAHRSRQVAAKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...AGCAGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538021.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLLCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: VTYLDIPQVFGNTVTAHLRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...GAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: RERGGYRLNCRTICTWASQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGATCTCCAGACGCAGCTaGGGGAGGCGCTTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLISRRS*GRRFSA
Trigger: GGCTGAGAAGCGCCTCCCCAAGCTGCGTCTGGAGAT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKSSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGGGAAGGTAAGTCAGTaGCCATGCCACAGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAGKVSQ*PCHSQG
Trigger: CCCTTGGCTGTGGCATGGCAACTGACTTACCTTCCC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCTTCCTCCTTCAGGTTTaGGGGCTGAGAAGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSFLLQV*GLRRGL
Trigger: AAGACCCCTTCTCAGCCCCAAAACCTGAAGGAGGAA...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGAGGCTACAGACTAAATaGCAGAACTATCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRRLQTK*QNYLHL
Trigger: CAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACCCACAGAGCTGAGCTaGCTTGGTTATCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPPTELS*LGYLGL
Trigger: CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCTGGCTAAGGTGGGCTaGAAACATTGGCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKLAKVG*KHWLVC
Trigger: ACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAG...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTTTTTGTTTGTTTTTGTaGGAGACGGAGGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAFCLFL*ETEAGS
Trigger: AGAGCCAGCCTCCGTCTCCAACAAAAACAAACAAAA...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACTGAGTTGCATGAGGACTAGCAGAGGGTGGCAGTTCAGTCTGGTCCCTGTCTCTCACCTTGCTGCATaGTCTCAGAGCTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: GLSCMRTSRGWQFSLVPVSHLAA*SQSSNP
Trigger: AGGATTTGAGCTCTGAGACAATGCAGCAAGGTGAGA...GACAGGGACCAGACTGAACTGCCACCCTCTGCTAGTCCTCATGCAACTCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGAGTGTTCCCCTTCCATaGCTGTCCCTGAATTGCCCA +
Preference number: 5 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLSVPLP*LSLNCP
Trigger: TGGGCAATTCAGGGACAGCAATGGAAGGGGAACACT...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGGAGACCCAATAAACTaGGCCACCTTTTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVGDPIN*ATFLAS
Trigger: AGATGCTAAAAAGGTGGCCAAGTTTATTGGGTCTCC...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS TCA 90 bp AATGAGGGCTCAATTCTCTGGAGGAACCTCCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAAGGCCG +
Preference number: 5 (lower is better)
Translates to: NEGSILWRNLHQAAP*QCGSHQQEQHSARP
Trigger: CGGCCTTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGTTCCTCCAGAGAATTGAGCCCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445069.4
ENST00000646117.1
CDS TCA 90 bp CTGCCAATCAGCTGGGCTCTTGACAGTCTTCACCTTGAAGGGTGCTaGGCTTTGTGTCCAGATGCCAATGAATGTCGGACGACAGATGGA +
Preference number: 5 (lower is better)
Translates to: LPISWALDSLHLEGC*ALCPDANECRTTDG
Trigger: TCCATCTGTCGTCCGACATTCATTGGCATCTGGACACAAAGCTCAGCACCCTTCAAGGTGAAGACTGTCAAGAGCCCAGCTGATTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS GCA 90 bp GACCTGTACCACACTGTTGTTTCGGTTGATGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTGCTTTGCATTGACATCTGCACCTTC +
Preference number: 5 (lower is better)
Translates to: DLYHTVVSVDGCHHE*CPAKSVLCIDICTF
Trigger: GAAGGTGCAGATGTCAATGCAAAGCACAGACTTGGCTGGACAGCACTCATGGTGGCAGCCATCAACCGAAACAACAGTGTGGTACAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000538039.6
ENST00000539148.3
ENST00000543042.6
ENST00000544683.5
ENST00000642288.1
ENST00000646117.1
CDS GCA 90 bp GACCTGTACCACACTGTTGTTTCGGTTGATGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTGCTTTGCATTGACATCTGCACATGC +
Preference number: 5 (lower is better)
Translates to: DLYHTVVSVDGCHHE*CPAKSVLCIDICTC
Trigger: GCATGTGCAGATGTCAATGCAAAGCACAGACTTGGCTGGACAGCACTCATGGTGGCAGCCATCAACCGAAACAACAGTGTGGTACAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS GCA 90 bp CCTCTGCAGGGGGTTGGCTCCTGCAATATTCTGAGTAAAGTATGCTaGTTCATACTCCATGCCTTTGAACACGTTGCTCCCTCCGCCTTC +
Preference number: 5 (lower is better)
Translates to: PLQGVGSCNILSKVC*FILHAFEHVAPSAF
Trigger: GAAGGCGGAGGGAGCAACGTGTTCAAAGGCATGGAGTATGAAGCAGCATACTTTACTCAGAATATTGCAGGAGCCAACCCCCTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645650.1
CDS CCA 90 bp CTTCTTGGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGCCACCTTTTTAGCATCTTTGTGCAT +
Preference number: 5 (lower is better)
Translates to: LLGQLATLLMANVAW*RPNKLGHLFSIFVH
Trigger: ATGCACAAAGATGCTAAAAAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS CCA 90 bp CAACTTCTTGGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTaGTGGAGACCCAATAAACTTGGCCACCTTTTTAGCATCTTTGTG +
Preference number: 5 (lower is better)
Translates to: QLLGQLATLLMANVA*WRPNKLGHLFSIFV
Trigger: CACAAAGATGCTAAAAAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACCAAGAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPTSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKTSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: VISALPSGLLVSSLLTPFLTSCI*LARAAS
Trigger: GGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAG...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCAGCCTGCTGACTTCTaGCATATTGTTGGCACGGGC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAQPADF*HIVGTG
Trigger: GCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGGCCCTCATCAACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: ASLQSMVFPFPSVSRPSSTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...TGATGAGGGCCGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCACGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: PPGFRQYGYGSSPKLPASTSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...TGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTCGTCGCTGGCCACATaGGAGGTCATGATGAAGATG +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEASSLAT*EVMMKM
Trigger: CATCTTCATCATGACCTCCAATGTGGCCAGCGACGA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RERGGYRLNCRTICTWASMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: VTYLDIPQVFGNTVTAHLMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...GAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TCTGGGCTTTTGAGTAGCTGCTTGTCTGAGTCCTCCACCGTGATGCGCAAAGTACTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: SGLLSSCLSESSTVMRKVLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...TACTTTGCGCATCACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: RERGGYRLNCRTICTWASLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPRVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCGAGTCTTGCTGTCCTaGTCGATGATCTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRARVLLS*SMISRR
Trigger: GCGTCTGGAGATCATCGACAAGGACAGCAAGACTCG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTATTACCCAAGGGACTTaGATTCCTGGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPITQGT*IPGPIL
Trigger: GAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAAT...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTGACTCCATGGCCATGTACTTCTGTGGTTGTCTaGGCAAAAATGCAGATCCTC +
Preference number: 5 (lower is better)
Translates to: RLAGRAVQTGLRLTPWPCTSVVV*AKMQIL
Trigger: GAGGATCTGCATTTTTGCCAAGACAACCACAGAAGT...ACATGGCCATGGAGTCAGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GTTGCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCTATTCTGTCCAGATCTaGGTTTCCAGTGGCATCAAG +
Preference number: 5 (lower is better)
Translates to: VAMPQPRGLYWMVRAHRSYSVQI*VSSGIK
Trigger: CTTGATGCCACTGGAAACCAAGATCTGGACAGAATA...GCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGCAGCTCCTCTCCTGAAGGCTTGTTAGCAGGTTATGGGCCCACAACAAAGGGGTTTTGTTTGTTTTTGTaGGAGACGGAGGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GSSSPEGLLAGYGPTTKGFCLFL*ETEAGS
Trigger: AGAGCCAGCCTCCGTCTCCAACAAAAACAAACAAAA...CCCCTTTGTTGTGGGCCCATAACCTGCTAACAAGCCTTCAGGAGAGGAGCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCATCTATTTTGGGGGTaGAGTGATGGCTATAGGAGT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQHLFWG*SDGYRS
Trigger: ACTCCTATAGCCATCACTCAACCCCCAAAATAGATG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTAGCAGTCCACCTGCCTaGACCCCTCAGTGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPSSPPA*TPQCSV
Trigger: AACAGAACACTGAGGGGTCAAGGCAGGTGGACTGCT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCATTCTTTGCAGTCTCTaGGGGCTGCTGACTTCTTGC +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPILCSL*GLLTSC
Trigger: GCAAGAAGTCAGCAGCCCCAAGAGACTGCAAAGAAT...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR CAA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCACTGAGCATCATTCTTaGCAGTCTCTTGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSTEHHS*QSLGAA
Trigger: AGCAGCCCCAAGAGACTGCAAAGAATGATGCTCAGT...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGTCAGAGGAGGAAATCTaGGTGTTCTTCAGTGAGACT +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQSEEEI*VFFSET
Trigger: AGTCTCACTGAAGAACACCAAGATTTCCTCCTCTGA...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS GCA 90 bp TGGCAATTCAGCTCCAAGTCTGTGCTCTTAGCCATCATGCTACACTaGCTCATAGCTTCCTCTCTGCCAATCAGCTGGGCTCTTGACAGT +
Preference number: 5 (lower is better)
Translates to: WQFSSKSVLLAIMLH*LIASSLPISWALDS
Trigger: ACTGTCAAGAGCCCAGCTGATTGGCAGAGAGGAAGCTATGAGGCAGTGTAGCATGATGGCTAAGAGCACAGACTTGGAGCTGAATTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS GCA 90 bp ATTCCTCTGCAGGGGGTTGGCTCCTGCAATATTCTGAGTAAAGTATaGTGCTTCATACTCCATGCCTTTGAACACGTTGCTCCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: IPLQGVGSCNILSKV*CFILHAFEHVAPSA
Trigger: GGCGGAGGGAGCAACGTGTTCAAAGGCATGGAGTATGAAGCAGCATACTTTACTCAGAATATTGCAGGAGCCAACCCCCTGCAGAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645650.1
CDS-3UTR CAA 90 bp CAATGGAATATGGTAGTGGCATCCCCTGGGGGATGGAAGAGTGGATTCCCAACAACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: QWNMVVASPGGWKSGFPTTSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...TGTTGGGAATCCACTCTTCCATCCCCCAGGGGATGCCACTACCATATTCCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS-3UTR CAA 90 bp GTGATCAGTGCTCTCCCTTCTGGGCTCCTAGTGTCCTCCCTACTTACTCCTTTTACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAAC +
Preference number: 5 (lower is better)
Translates to: VISALPSGLLVSSLLTPFTSCIL*ARAASN
Trigger: GTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGT...AAAAGGAGTAAGTAGGGAGGACACTAGGAGCCCAGAAGGGAGAGCACTGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALTSCI*LARAAS
Trigger: GGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTACCTGTACCACACTGTaGTTTCGGTTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPTCTTL*FRLMAA
Trigger: GGCAGCCATCAACCGAAACAACAGTGTGGTACAGGT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTACCTGTACCACACTGTaGTTTCGGTTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRATCTTL*FRLMAA
Trigger: GGCAGCCATCAACCGAAACAACAGTGTGGTACAGGT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAAATCATCTCCAAGGTTaGGATCAGCCCCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SLATMGDGDHSEGNKGPPNHLQG*DQPQQQ
Trigger: TTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATT...TGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GCCTTGTCTACTTCATCAAAGAGCACCACAGCATTGGGGCACTGCTTCAACTTCCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: ALSTSSKSTTALGHCFNFRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTTTGATGAAGTAGACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: VTYLDIPQVFGNTVTAHLLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...GAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKCFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLCFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPCFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCCTCATCAAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSSNSCSMMVSTSGWALSSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...AGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTTGATGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGGCTCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: QPRGLYWMVRAHRSRQVAPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...AGCCACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGGTGCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PQPRGLYWMVRAHRSRQVPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...CACCTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGAAGAGCACCACAGCATaGGGGCACTGCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: DEDGVLAINGLPFSICQPKSTTA*GHCFNF
Trigger: GAAGTTGAAGCAGTGCCCCAATGCTGTGGTGCTCTT...CGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGCCATCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: QALLCLAKVGLKHWLVCETSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTTGAAGTCTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: QGRAALETGAVVQPVVEVFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...GACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp ATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGCAGCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: MPQPRGLYWMVRAHRSRQRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...CTGCCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000543042.6
ENST00000642187.1
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CACCACACGGCGTTCTACCTCATGTTTGATGGAGCGGGCGCCATAGTGCACATTCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: HHTAFYLMFDGAGAIVHIQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...AATGTGCACTATGGCGCCCGCTCCATCAAACATGAGGTAGAACGCCGTGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TTGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSLIWTSPRFSAIRLRLIMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...GATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCTTTTGAGTAGCTGCTaGTCTGAGTCCTCCACCGTG +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPLLSSC*SESSTV
Trigger: CACGGTGGAGGACTCAGACAAGCAGCTACTCAAAAG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTTCCAGTCTGCGAGTCTaGCTGTCCTTGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPSSLRV*LSLSMI
Trigger: GATCATCGACAAGGACAGCAAGACTCGCAGACTGGA...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGAAGAGTGGATTCCCAACATTGCTGCTCTGCAAATGCCCTGCCAAAAGGGGAAAGTGGATTCCCAACATaGCTGCTCTGCAAATGCCCT +
Preference number: 5 (lower is better)
Translates to: GRVDSQHCCSANALPKGESGFPT*LLCKCP
Trigger: AGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACT...TTCCCCTTTTGGCAGGGCATTTGCAGAGCAGCAATGTTGGGAATCCACTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS TCA 90 bp CTGGGAGAGAAGTTAATTCCTGTGTACGATGGATGCCTTGGAGAATaGGGGCTCAATTCTCTGGAGGAACCTCCATCAAGCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGEKLIPVYDGCLGE*GLNSLEEPPSSSSL
Trigger: CAAGGAGCTGCTTGATGGAGGTTCCTCCAGAGAATTGAGCCCTCATTCTCCAAGGCATCCATCGTACACAGGAATTAACTTCTCTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445069.4
ENST00000646117.1
CDS CCA 90 bp AGGACATACCCATCTCAGGACTGCGTGGAGGGCCCACTAAGACAGTaGCAGTACTTTAGAAACGTGGACTTTGACAAGCAAACTGATGTC +
Preference number: 5 (lower is better)
Translates to: RTYPSQDCVEGPLRQ*QYFRNVDFDKQTDV
Trigger: GACATCAGTTTGCTTGTCAAAGTCCACGTTTCTAAAGTACTGCCACTGTCTTAGTGGGCCCTCCACGCAGTCCTGAGATGGGTATGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544683.5
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GATGAAGATGGCGTCCTTGCAATCAATGGTCTTCCCTTTTCCATCTGTCAGCCGTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: DEDGVLAINGLPFSICQPLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...CGGCTGACAGATGGAAAAGGGAAGACCATTGATTGCAAGGACGCCATCTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp GCCCAGAAGTTTAGTTCCTTGTTGACGAGTTGGATGAGCTCCGAGTGGCAGAAGTGCTTCTCTTGGTACTaGGCTTCAGAAGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: AQKFSSLLTSWMSSEWQKCFSWY*ASEVLR
Trigger: TCTGAGGACTTCTGAAGCCAAGTACCAAGAGAAGCA...CTTCTGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAACTAAACTTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTATTTGGCTGTCTGCTaGGCCAGCTCTGTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAYLAVC*ASSVFP
Trigger: AGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTACATCTGGATGGGCCTaGTCTACTTCATCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEATSGWA*STSSKS
Trigger: GCTCTTTGATGAAGTAGACAAGGCCCATCCAGATGT...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: HPPGFRQYGYGSSPKLPAFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...GGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp GGACGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRGVRRNTGHNIVAETGKKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...CTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAAAGTTTAGTTCCTTGTaGACGAGTTGGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEKFSSL*TSWMSS
Trigger: GGAGCTCATCCAACTCGTCAACAAGGAACTAAACTT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGGTTTTCGGCAATACGGTTACGGCTCATCTCCAAAGCTTCCTGCCTCAGCTGCAGAAGTTTAGTTCCTaGTTGACGAGTTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: QVFGNTVTAHLQSFLPQLQKFSS*LTSWMS
Trigger: GCTCATCCAACTCGTCAACAAGGAACTAAACTTCTG...CAGCTGAGGCAGGAAGCTTTGGAGATGAGCCGTAACCGTATTGCCGAAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRALCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AAACTCATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: KLIPPEVSFQDRANHILLGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...AAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGATGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAAGGCTACAGACTAAATaGCAGAACTATCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: QALLCLAKVGLKHWLVCERLQTK*QNYLHL
Trigger: CAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCT...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTATTACCCAAGGGACTTaGATTCCTGGCCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAITQGT*IPGPIL
Trigger: GAGAATGGGGCCAGGAATCAAAGTCCCTTGGGTAAT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AGGGAACGAGGAGGCTACAGACTAAATTGCAGAACTATCTGCACCTGGGCCTCTTCTCACCTTGCTGCATaGTCTCAGAGCTCAAATCCT +
Preference number: 5 (lower is better)
Translates to: RERGGYRLNCRTICTWASSHLAA*SQSSNP
Trigger: AGGATTTGAGCTCTGAGACAATGCAGCAAGGTGAGA...AGAGGCCCAGGTGCAGATAGTTCTGCAATTTAGTCTGTAGCCTCCTCGTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCAACCAGCTAATTTTTaGCAGAGATGGGGTTTCACC +
Preference number: 5 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPQPANF*QRWGFT
Trigger: GGTGAAACCCCATCTCTGCAAAAAATTAGCTGGTTG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACATCAGAGGAGGAAATCTaGGTGTTCTTCAGTGAGACT +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTSEEEI*VFFSET
Trigger: AGTCTCACTGAAGAACACCAAGATTTCCTCCTCTGA...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS-3UTR CAA 90 bp AAGAACAGCATAGTGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGTTAGCTACAAATGTCTaGCCACAGAGTTTTCCAACG +
Preference number: 5 (lower is better)
Translates to: KNSIVQGRAALETGAVVQLATNV*PQSFPT
Trigger: CGTTGGAAAACTCTGTGGCAAGACATTTGTAGCTAA...CTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCACTATGCTGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CAA 90 bp GCCATGCCACAGCCAAGGGGCCTTTATTGGATGGTGAGGGCACATAGGAGCAGGACCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: AMPQPRGLYWMVRAHRSRTFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGT...CCTGCTCCTATGTGCCCTCACCATCCAATAAAGGCCCCTTGGCTGTGGCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS TCA 90 bp CCAAAGAATGGATTCCCTGTTCCTTGGCAGTCTTGTAAACACTGCTaGAATCATCTCCAAGGTTTGGATCAGCCCCAGCAGCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PKNGFPVPWQSCKHC*NHLQGLDQPQQQAG
Trigger: TCCTGCTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGACTGCCAAGGAACAGGGAATCCATTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000539148.3
ENST00000543042.6
ENST00000544683.5
ENST00000642288.1
ENST00000646117.1
CDS CCA 90 bp CATAATCCAAGGGTGTGTGTCCCATTTCATTCCTCTGCAGGGGGTTaGCTCCAGAATGTTTTCAAGGTTCATCCATGTGGTAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: HNPRVCVPFHSSAGG*LQNVFKVHPCGSMA
Trigger: AGCCATGCTACCACATGGATGAACCTTGAAAACATTCTGGAGCCAACCCCCTGCAGAGGAATGAAATGGGACACACACCCTTGGATTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645105.1
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTAGTCTGTGCTTTGCATaGACATCTGCACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRASLCFA*TSAPSD
Trigger: GTCAGAAGGTGCAGATGTCAATGCAAAGCACAGACT...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTTTCCTCTGCAGGGGGTaGGCTCCTCCATCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLFLCRG*APPSSS
Trigger: GCTGCTTGATGGAGGAGCCAACCCCCTGCAGAGGAA...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCTTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CHLSGHPPGFRQYGYGSSSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...AGATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATGGAGACCCAATAAACTaGGCCACCTCGTGTCGCTCC +
Preference number: 5 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDGDPIN*ATSCRS
Trigger: GGAGCGACACGAGGTGGCCAAGTTTATTGGGTCTCC...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp TTGTCACTTATCTGGACATCCCCCAGGTTTTCGGCAATACGGTTACGGCTCATCATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LSLIWTSPRFSAIRLRLIMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...GATGAGCCGTAACCGTATTGCCGAAAACCTGGGGGATGTCCAGATAAGTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAATTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTTCCTTGTTGACGAGTaGGATGAGCTCCGAGTGGCA +
Preference number: 5 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSFLVDE*DELRVA
Trigger: TGCCACTCGGAGCTCATCCAACTCGTCAACAAGGAA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTCTTTGCTTGGCTCTCTaGGCCCAGAAGTTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: IPPEVSFQDRANHILLEVLCLAL*AQKFSS
Trigger: GGAACTAAACTTCTGGGCCAAGAGAGCCAAGCAAAG...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGATGTTGTGCCTTTGCTaGGCTCTCTTGGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLMLCLC*ALLAQK
Trigger: CTTCTGGGCCAAGAGAGCCAAGCAAAGGCACAACAT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CCTAATGTCTGCGATGTTGGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGGTATCACTTCTGTGGTaGTCTTGGCAAAAATGCAGA +
Preference number: 5 (lower is better)
Translates to: PNVCDVGLLKEAPTELSLVSLLW*SWQKCR
Trigger: TCTGCATTTTTGCCAAGACAACCACAGAAGTGATAC...CAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACCAACATCGCAGACATTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GGTCTTTTGAAGGAGGCCCCCACAGAGCTGAGCTTGCTTGGTTATCTGGGACTGCCAACACCTTACTTTTaGCTTTATCATTCCGTGTGT +
Preference number: 5 (lower is better)
Translates to: GLLKEAPTELSLLGYLGLPTPYF*LYHSVC
Trigger: ACACACGGAATGATAAAGCAAAAAGTAAGGTGTTGG...CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGGGGCCTCCTTCAAAAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTCAACCAGCTAATTTTTaGCAGAGATGGGGTTTCACC +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAQPANF*QRWGFT
Trigger: GGTGAAACCCCATCTCTGCAAAAAATTAGCTGGTTG...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGACACTGTTGTTTCGGTaGATGGCTGCCACCATGAGT +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLTLLFR*MAATMS
Trigger: ACTCATGGTGGCAGCCATCAACCGAAACAACAGTGT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGCCACAGAGTTTTCCAACGGACAAAGGAAGAAGCTTTCTGCTTGGGGATGTTTTTGAAACTGGCGCGGTaGTTCAGCCTGTTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CHRVFQRTKEEAFCLGMFLKLAR*FSLLLK
Trigger: CTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAA...AAACATCCCCAAGCAGAAAGCTTCTTCCTTTGTCCGTTGGAAAACTCTGTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CAA 90 bp CTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LATMGDGDHSEGNKGPPSPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...GGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CGTGGGGTGAGGAGGAACACTGGGCATAATATAGTAGCGGAAACAGGCAAGCCTCCCTTTTTAGCATCTTaGTGCATATATTTGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RGVRRNTGHNIVAETGKPPFLAS*CIYLAV
Trigger: GACAGCCAAATATATGCACAAAGATGCTAAAAAGGG...AGGCTTGCCTGTTTCCGCTACTATATTATGCCCAGTGTTCCTCCTCACCCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp ATCCCTCCGGAAGTGAGCTTTCAGGATAGGGCGAATCACATTCTCCTTGAAGTTATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: IPPEVSFQDRANHILLEVMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...AACTTCAAGGAGAATGTGATTCGCCCTATCCTGAAAGCTCACTTCCGGAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp ATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGAGGCTTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: MFIPGSFSWTSSTDRAEAFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...AGCCTCAGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp CAGCCTGATGAAGCCCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTGCTTCAGAGCAGCGTGATGTaGTGCCTTTGCTTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: QPDEALFSIFVHIFGCLLQSSVM*CLCLAL
Trigger: GAGAGCCAAGCAAAGGCACAACATCACGCTGCTCTG...AAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGGCTTCATCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp CAGGCCTTACTGTGCCTGGCTAAGGTGGGCTTGAAACATTGGCTGGTCTGTGAAGGCAATTTCCTGGTTTaGATAAACTACAGTATGGCT +
Preference number: 5 (lower is better)
Translates to: QALLCLAKVGLKHWLVCEGNFLV*INYSMA
Trigger: AGCCATACTGTAGTTTATCAAAACCAGGAAATTGCC...TTCACAGACCAGCCAATGTTTCAAGCCCACCTTAGCCAGGCACAGTAAGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTTATTCTGTCCAGATCTaGGTTTCCAGTGGCATCAAG +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPYSVQI*VSSGIK
Trigger: CTTGATGCCACTGGAAACCAAGATCTGGACAGAATA...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGAATCTGGGTCTCACCTaGCTGCATTGTCTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLNLGLT*LHCLRA
Trigger: AGCTCTGAGACAATGCAGCAAGGTGAGACCCAGATT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCATCCCCATGCCTGGCTAATTTaGGTATTTTTAGTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: WRLWGMGIILKEIRDLHPHAWLI*VFLVEV
Trigger: CACCTCTACTAAAAATACCAAAATTAGCCAGGCATG...GGGATGGAGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GCTGACTCCATGGCCATGTGGGCAGAGGTCAAACCCATGATCTCTCTTCCTACACATGCCTGGCTAATTTaGGTATTTTTAGTAGAGGTG +
Preference number: 5 (lower is better)
Translates to: ADSMAMWAEVKPMISLPTHAWLI*VFLVEV
Trigger: CACCTCTACTAAAAATACCAAAATTAGCCAGGCATG...TGTAGGAAGAGAGATCATGGGTTTGACCTCTGCCCACATGGCCATGGAGTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTCATCTATTTTGGGGGTaGAGTGATGGCTATAGGAGT +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAHLFWG*SDGYRS
Trigger: ACTCCTATAGCCATCACTCAACCCCCAAAATAGATG...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS TCA 90 bp TGTCCCATTTCATTCCTCTGCAGGGGGTTGGCTCCTGCAATATTCTaGGTAAAGTATGCTGCTTCATACTCCATGCCTTTGAACACGTTG +
Preference number: 5 (lower is better)
Translates to: CPISFLCRGLAPAIF*VKYAASYSMPLNTL
Trigger: CAACGTGTTCAAAGGCATGGAGTATGAAGCAGCATACTTTACTCAGAATATTGCAGGAGCCAACCCCCTGCAGAGGAATGAAATGGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645650.1
CDS GCA 90 bp CAGATGCCAATGAATGTCGGACGACAGATGGACTATAGACTCTCGTaGTTACTTATGTCAAGTGACCTGGGTTCTCACCCTAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: QMPMNVGRQMDYRLS*LLMSSDLGSHPSSS
Trigger: AGAAGAACTAGGGTGAGAACCCAGGTCACTTGACATAAGTAAGCACGAGAGTCTATAGTCCATCTGTCGTCCGACATTCATTGGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAACAGGGCTGCATCCTaGTTGGACGGACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLNRAAS*LDGLLL
Trigger: CAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTT...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGAGTCTGTGCTTTGCATaGACATCTGCACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLSLCFA*TSAPSD
Trigger: GTCAGAAGGTGCAGATGTCAATGCAAAGCACAGACT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATACCTGTACCACACTGTaGTTTCGGTTGATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDTCTTL*FRLMAA
Trigger: GGCAGCCATCAACCGAAACAACAGTGTGGTACAGGT...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp TGTCGAAACAACACAGTGCCAACTTCAATGAGTTCTCACTGGCCAAATCTGAGCTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CRNNTVPTSMSSHWPNLSSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...GCTCAGATTTGGCCAGTGAGAACTCATTGAAGTTGGCACTGTGTTGTTTCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGTCTTTGTGCATATATTaGGCTGTCTGCTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLSLCIY*AVCLAS
Trigger: GCTGGCCAAGCAGACAGCCAAATATATGCACAAAGA...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000538039.6
CDS-3UTR CAA 90 bp AAACAGCTGCAGCATGATGGTGAGCACATCTGGATGGGCCTTGTCTACTTCATCTTTGAGATGGTGATCTaGTCACTTATCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: KQLQHDGEHIWMGLVYFIFEMVI*SLIWTS
Trigger: GGATGTCCAGATAAGTGACAAGATCACCATCTCAAA...GATGAAGTAGACAAGGCCCATCCAGATGTGCTCACCATCATGCTGCAGCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCGTGATGTTGTGCCTTaGCTTGGCTCTCTTGGCCCA +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLRDVVP*LGSLGP
Trigger: TGGGCCAAGAGAGCCAAGCAAAGGCACAACATCACG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCCCACAGAGCTGAGCTaGCTTGGTTATCTGGGACTG +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLPTELS*LGYLGL
Trigger: CAGTCCCAGATAACCAAGCAAGCTCAGCTCTGTGGG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp AACTGCATGTTTATTCCAGGCTCGTTTAGCTGGACGAGCAGTACAGACAGGGCTGTATCACTTCTGTGGTaGTCTTGGCAAAAATGCAGA +
Preference number: 5 (lower is better)
Translates to: NCMFIPGSFSWTSSTDRAVSLLW*SWQKCR
Trigger: TCTGCATTTTTGCCAAGACAACCACAGAAGTGATAC...AGCCCTGTCTGTACTGCTCGTCCAGCTAAACGAGCCTGGAATAAACATGCAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TGCATATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: CIYLAVCLASSVFPIPDDLFSLL*KSSSRV
Trigger: CACCCGAGAGGATGACTTCAACAACAGGCTGAACAA...ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLRLFSL*LKSSSR
Trigger: CCGAGAGGATGACTTCAACAACAGGCTGAACAACCG...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TATATTTGGCTGTCTGCTTGGCCAGCTCTGTTTTTCCTATTCCAGATGATCCCAATGAAGATGGCGTCCTaGCAATCAATGGTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: YIWLSAWPALFFLFQMIPMKMAS*QSMVFP
Trigger: AGGGAAGACCATTGATTGCAAGGACGCCATCTTCAT...TGGGATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535477.6
ENST00000642187.1
CDS-3UTR CAA 90 bp ATCAAGCAGCTCCTTGACAGTGCGGTAGTCATCAGCAAGAACAGCATAGTGCAACGAATCACATTCTCCTaGAAGTTCTTTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: IKQLLDSAVVISKNSIVQRITFS*KFFEMV
Trigger: CACCATCTCAAAGAACTTCAAGGAGAATGTGATTCG...TTGCACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS-3UTR CAA 90 bp ACATTCTCCTTGAAGTTCTTTGAGATGGTGATCTTGTCACTTATCTGGACATCCGGCAGTTCTGGGCTTTaGAGTAGCTGCTTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TFSLKFFEMVILSLIWTSGSSGL*SSCLSE
Trigger: CTCAGACAAGCAGCTACTCAAAAGCCCAGAACTGCC...GGATGTCCAGATAAGTGACAAGATCACCATCTCAAAGAACTTCAAGGAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000535477.6
ENST00000538021.5
ENST00000642187.1
CDS-3UTR CAA 90 bp AGAGGTCAAACCCATGATCTCTCTTCCTACAGCTTCCTAATGTCTGCGATGTTGACTTCTGTGGTTGTCTaGGCAAAAATGCAGATCCTC +
Preference number: 5 (lower is better)
Translates to: RGQTHDLSSYSFLMSAMLTSVVV*AKMQIL
Trigger: GAGGATCTGCATTTTTGCCAAGACAACCACAGAAGT...CAACATCGCAGACATTAGGAAGCTGTAGGAAGAGAGATCATGGGTTTGACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GAAAGTCTGGCGACTATGGGGGATGGGGATCATTCTGAAGGAAATAAGGGACCTCCAACACCTTACTTTTaGCTTTATCATTCCGTGTGT +
Preference number: 5 (lower is better)
Translates to: ESLATMGDGDHSEGNKGPPTPYF*LYHSVC
Trigger: ACACACGGAATGATAAAGCAAAAAGTAAGGTGTTGG...AGGTCCCTTATTTCCTTCAGAATGATCCCCATCCCCCATAGTCGCCAGACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTAGTCTGTGCTTTGCATaGACATCTGCACCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLSLCFA*TSAPSD
Trigger: GTCAGAAGGTGCAGATGTCAATGCAAAGCACAGACT...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS-3UTR CAA 90 bp GCAGAGATAATGTCCTTGGTGAACACTCCAATTCTTAGCTACAAATGTCTTGCCGCAGAGATAATGTCCTaGGTGAACACTCCAATTCTT +
Preference number: 5 (lower is better)
Translates to: AEIMSLVNTPILSYKCLAAEIMS*VNTPIL
Trigger: AAGAATTGGAGTGTTCACCAAGGACATTATCTCTGC...GGCAAGACATTTGTAGCTAAGAATTGGAGTGTTCACCAAGGACATTATCTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536297.1
CDS-3UTR CAA 90 bp ATTCTTTTCCGTTATGAGCTCCCCATCAAGGAAACATTGAGAGAGAGAGTGGCATGCTTTCCATATTTATaGCTAGTGGCTTTACCACCT +
Preference number: 5 (lower is better)
Translates to: ILFRYELPIKETLRERVACFPYL*LVALPP
Trigger: AGGTGGTAAAGCCACTAGCAATAAATATGGAAAGCA...TGCCACTCTCTCTCTCAATGTTTCCTTGATGGGGAGCTCATAACGGAAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS CCA 90 bp GACAGATGGACTATAGACTCTCGTGCTTACTTATGTCAAGTGACCTaGGTTCTCACCCTAGTTCTTCTAATGATTTGCTATGTAATTTTG +
Preference number: 5 (lower is better)
Translates to: DRWTIDSRAYLCQVT*VLTLVLLMICYVIL
Trigger: CAAAATTACATAGCAAATCATTAGAAGAACTAGGGTGAGAACCCAGGTCACTTGACATAAGTAAGCACGAGAGTCTATAGTCCATCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS-3UTR CAA 90 bp TTCAAAGGGAAAATTCCTAATTTTACAGTGGAGAAACCTGGCACACACCACCTTGGCAATTTCCTGGTTTaGATAAACTACAGTATGGCT +
Preference number: 5 (lower is better)
Translates to: FKGKIPNFTVEKPGTHHLGNFLV*INYSMA
Trigger: AGCCATACTGTAGTTTATCAAAACCAGGAAATTGCC...AAGGTGGTGTGTGCCAGGTTTCTCCACTGTAAAATTAGGAATTTTCCCTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294053.9
ENST00000538039.6
CDS CCA 72 bp CTGCGGCCAGGGCGCACATGCCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGTCCTGTCCTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: LRPGRTCPVRPC*GPRSSCPVLGV
Trigger: CACTCCCAGGACAGGACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS GCA 72 bp GGTGCCGGCCCCTGTGCTGACCACGTCCAACATGGCTaGCGCGGCGCGTTCGAAGACGCCGCGAACAGGGTG +
Preference number: 6 (lower is better)
Translates to: GAGPCADHVQHG*RGAFEDAANRV
Trigger: CACCCTGTTCGCGGCGTCTTCGAACGCGCCGCGGCAGCCATGTTGGACGTGGTCAGCACAGGGGCCGGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000543042.6
ENST00000646117.1
CDS TCA 72 bp GCTGCTTCGATAACCCCGTGGTGCCGGCCCCTGTGCTaGCCACGTCCAACATGGCTGCCGCGGCGCGTTCGA +
Preference number: 6 (lower is better)
Translates to: AASITPWCRPLC*PRPTWLPRRVR
Trigger: TCGAACGCGCCGCGGCAGCCATGTTGGACGTGGTCAGCACAGGGGCCGGCACCACGGGGTTATCGAAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000543042.6
ENST00000646117.1
CDS CCA 72 bp CTCCCAGTAGTCACATTCCGGCCGGAAGCACCTCCATaGCCCCGGAGCGTTGGGGACCTGAGCAGCCGGAGG +
Preference number: 6 (lower is better)
Translates to: LPVVTFRPEAPP*PRSVGDLSSRR
Trigger: CCTCCGGCTGCTCAGGTCCCCAACGCTCCGGGGCCATGGAGGTGCTTCCGGCCGGAATGTGACTACTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000538039.6
ENST00000543042.6
ENST00000646117.1
CDS GCA 72 bp GGACGGACTCTTGCTGTAGCAATGAACCACCAGCGCTaGGGCCAGGGCGCACATGCCCAGTCCGGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: GRTLAVAMNHQR*GQGAHAQSGPA
Trigger: AGCAGGGCCGGACTGGGCATGTGCGCCCTGGCCGCAGCGCTGGTGGTTCATTGCTACAGCAAGAGTCCGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS GCA 72 bp GCGGCGCGTTCGAAGACGCCGCGAACAGGGTGGAGTTaGGCACTACCTCACGGGAGAGGTAGTCCACAGCCC +
Preference number: 6 (lower is better)
Translates to: AARSKTPRTGWS*ALPHGRGSPQP
Trigger: GGGCTGTGGACTACCTCTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCGCGGCGTCTTCGAACGCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000646117.1
CDS CCA 72 bp GCTGCCGCGGCGCGTTCGAAGACGCCGCGAACAGGGTaGAGTTGCGCACTACCTCACGGGAGAGGTAGTCCA +
Preference number: 6 (lower is better)
Translates to: AAAARSKTPRTG*SCALPHGRGSP
Trigger: TGGACTACCTCTCCCGTGAGGTAGTGCGCAACTCCACCCTGTTCGCGGCGTCTTCGAACGCGCCGCGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000543042.6
ENST00000646117.1
CDS CCA 72 bp TGCATTGACATCTGCACATGCCCAGTCCGGCCCTGCTaGGGACCCCGTTCCAGCTGTCCTGTCCTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: CIDICTCPVRPC*GPRSSCPVLGV
Trigger: CACTCCCAGGACAGGACAGCTGGAACGGGGTCCCCAGCAGGGCCGGACTGGGCATGTGCAGATGTCAATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS CCA 72 bp GGGTCCCCAGCACCCACTGTGGCGATGGCGCTCTCCTaGCCAATGATGTGCTCCTTTAGTCGCTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GSPAPTVAMALS*PMMCSFSRCSR
Trigger: CCTGGAGCAGCGACTAAAGGAGCACATCATTGGCCAGGAGAGCGCCATCGCCACAGTGGGTGCTGGGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642187.1
CDS TCA 72 bp GTCGCAGCCCGGCAGCCCTTCGCAGTAGCCAACAGGTaGTTCCAGGGTCAGCAAGGGTCAGTTTCCATACCC +
Preference number: 6 (lower is better)
Translates to: VAARQPFAVANR*FQGQQGSVSIP
Trigger: GGGTATGGAAACTGACCCTTGCTGACCCTGGAATCACCTGTTGGCTACTGCGAAGGGCTGCCGGGCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542555.2
CDS CCA 72 bp GGAGTGTTTCTTCGGGACCAGGAAGGCGTCCCCAAGTaGCAGCCGCGAGGCATTTGGTATCGAAGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: GVFLRDQEGVPK*QPRGIWYRSVL
Trigger: GAGGACGCTTCGATACCAAATGCCTCGCGGCTGCCACTTGGGGACGCCTTCCTGGTCCCGAAGAAACACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS CAA 90 bp AAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTGATCAGGACGCCAGCGGGGAGTCCT +
Preference number: 6 (lower is better)
Translates to: KAVQPLKLARLFSLL*KSSSRVIRTPAGSP
Trigger: AGGACTCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS CAA 90 bp TGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGGGTGATCAGGACGCCAGCGGGGAGT +
Preference number: 6 (lower is better)
Translates to: CKAVQPLKLARLFSL*LKSSSRVIRTPAGS
Trigger: ACTCCCCGCTGGCGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS TCA 72 bp ATTGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCTaGAGAGAAAGGGGGCACTGGTCAGATCCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: IVGTGSFQQGCI*RERGHWSDPRP
Trigger: TGGCCGCGGATCTGACCAGTGCCCCCTTTCTCTTCAGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539148.3
ENST00000544683.5
ENST00000642288.1
CDS GCA 72 bp CTTCCAACAGGGCTGCATCCTTGTTGGACGGACTCTTaGTGTAGCAATGAACCACCAGCGCTGCGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LPTGLHPCWTDS*CSNEPPALRPG
Trigger: CCCTGGCCGCAGCGCTGGTGGTTCATTGCTACAGCAAGAGTCCGTCCAACAAGGATGCAGCCCTGTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000535990.5
ENST00000538039.6
ENST00000542555.2
ENST00000543042.6
ENST00000646117.1
CDS GCA 72 bp TGCCACCATGAGTGCTGTCCAGCCAAGTCTGTGCTTTaGATTGACATCTGCACATGCCCAGTCCGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: CHHECCPAKSVL*IDICTCPVRPC
Trigger: GCAGGGCCGGACTGGGCATGTGCAGATGTCAATGCAAAGCACAGACTTGGCTGGACAGCACTCATGGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS CAA 72 bp CAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTGATCAGGACGCCAGCG +
Preference number: 6 (lower is better)
Translates to: QPLKLARLFSLL*KSSSRVIRTPA
Trigger: CGCTGGCGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS GCA 72 bp CTGAACTCCAGGGCACTTGTCCACTGGTTTGTGATGTaGCGGCTTGCACCGTCCTGTCCCCCATCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: LNSRALVHWFVM*RLAPSCPPSSK
Trigger: TTTGGAAGATGGGGGACAGGACGGTGCAAGCCGGCACATCACAAACCAGTGGACAAGTGCCCTGGAGTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS GCA 72 bp ATGGCTGCCACCATGAGTGCTGTCCAGCCAAGTCTGTaGTTTGCATTGACATCTGCACATGCCCAGTCCGGC +
Preference number: 6 (lower is better)
Translates to: MAATMSAVQPSL*FALTSAHAQSG
Trigger: GCCGGACTGGGCATGTGCAGATGTCAATGCAAAGCACAGACTTGGCTGGACAGCACTCATGGTGGCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535477.6
CDS CCA 72 bp GGTCAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTaGTGGAGACCCAATAAACTTGGCCACCTTTTTAGC +
Preference number: 6 (lower is better)
Translates to: GQLATLLMANVA*WRPNKLGHLFS
Trigger: GCTAAAAAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS CAA 72 bp GTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGGGTGATCAGGACGCCA +
Preference number: 6 (lower is better)
Translates to: VQPLKLARLFSL*LKSSSRVIRTP
Trigger: TGGCGTCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS CAA 90 bp TGCAAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGGGTGATCAGGATATGTTCCTGGCCA +
Preference number: 6 (lower is better)
Translates to: CKAVQPLKLARLFSL*LKSSSRVIRICSWP
Trigger: TGGCCAGGAACATATCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544382.5
CDS GCA 72 bp CAGGGCACTTGTCCACTGGTTTGTGATGTGCCGGCTTaGACCGTCCTGTCCCCCATCTTCCAAAGAATGGAT +
Preference number: 6 (lower is better)
Translates to: QGTCPLVCDVPA*TVLSPIFQRMD
Trigger: ATCCATTCTTTGGAAGATGGGGGACAGGACGGTGCAAGCCGGCACATCACAAACCAGTGGACAAGTGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535990.5
ENST00000536297.1
ENST00000539148.3
ENST00000543042.6
ENST00000646117.1
CDS CCA 72 bp CAGCTGGCCACCCTCCTCATGGCCAACGTAGCCTGGTaGAGACCCAATAAACTTGGCCACCTTTTTAGCATC +
Preference number: 6 (lower is better)
Translates to: QLATLLMANVAW*RPNKLGHLFSI
Trigger: GATGCTAAAAAGGTGGCCAAGTTTATTGGGTCTCCACCAGGCTACGTTGGCCATGAGGAGGGTGGCCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS CAA 72 bp GCACCTTCTGACAACAGCCTGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCC +
Preference number: 6 (lower is better)
Translates to: APSDNSLLTSCI*LARAASNRAAS
Trigger: GGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAGAAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000538039.6
ENST00000543042.6
ENST00000646117.1
CDS CAA 72 bp AGCAGGACCTGTACCACACTGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCC +
Preference number: 6 (lower is better)
Translates to: SRTCTTLLTSCI*LARAASNRAAS
Trigger: GGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGTGTGGTACAGGTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340729.9
CDS CAA 72 bp TGCAGTCTCTTGGGGCTGCTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAACAGGGCTGCATCCTTG +
Preference number: 6 (lower is better)
Translates to: CSLLGLLTSCIL*ARAASNRAASL
Trigger: CAAGGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCCCAAGAGACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS CAA 72 bp CTTTGCAGTCTCTTGGGGCTGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCC +
Preference number: 6 (lower is better)
Translates to: LCSLLGLLTSCI*LARAASNRAAS
Trigger: GGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCCCAAGAGACTGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437826.6
ENST00000535990.5
CDS CAA 90 bp GCACCTTCTGACAACAGCCTGAGGGGCCATTCAGAGGAGGAAATCTaGGTGTTCTTCAGTGAGACTCCAGCATTCAGCCCTGCCCAGCTT +
Preference number: 6 (lower is better)
Translates to: APSDNSLRGHSEEEI*VFFSETPAFSPAQL
Trigger: AAGCTGGGCAGGGCTGAATGCTGGAGTCTCACTGAAGAACACCAAGATTTCCTCCTCTGAATGGCCCCTCAGGCTGTTGTCAGAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437826.6
ENST00000535990.5
ENST00000642288.1
CDS CAA 90 bp AAGGCCGTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTGATCAGGATATGTTCCTGGCCATCT +
Preference number: 6 (lower is better)
Translates to: KAVQPLKLARLFSLL*KSSSRVIRICSWPS
Trigger: AGATGGCCAGGAACATATCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCACGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544382.5
CDS CAA 90 bp TCGCTCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTGCGCTaGGCAATTCAGCTCCAAGTCTGTGCTCTTAGCCATCATGCTACA +
Preference number: 6 (lower is better)
Translates to: SLLELGHVQPDEALR*AIQLQVCALSHHAT
Trigger: TGTAGCATGATGGCTAAGAGCACAGACTTGGAGCTGAATTGCCAAGCGCAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS GCA 72 bp CAGGACCTGTACCACACTGTTGTTTCGGTTGATGGCTaGCACCATGAGTGCTGTCCAGCCAAGTCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: QDLYHTVVSVDG*HHECCPAKSVL
Trigger: AAGCACAGACTTGGCTGGACAGCACTCATGGTGGCAGCCATCAACCGAAACAACAGTGTGGTACAGGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000539148.3
ENST00000543042.6
ENST00000544683.5
ENST00000642288.1
ENST00000646117.1
CDS GCA 72 bp TCCTGGAACTCGGACATGTCCAGCCTGATGAAGCCCTaGGCTTGGCAATTCAGCTCCAAGTCTGTGCTCTTA +
Preference number: 6 (lower is better)
Translates to: SWNSDMSSLMKP*AWQFSSKSVLL
Trigger: TAAGAGCACAGACTTGGAGCTGAATTGCCAAGCGCAGGGCTTCATCAGGCTGGACATGTCCGAGTTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CCA 72 bp AACTCGGACATGTCCAGCCTGATGAAGCCCTGCGCTTaGCAATTCAGCTCCAAGTCTGTGCTCTTAGCCATC +
Preference number: 6 (lower is better)
Translates to: NSDMSSLMKPCA*QFSSKSVLLAI
Trigger: GATGGCTAAGAGCACAGACTTGGAGCTGAATTGCCAAGCGCAGGGCTTCATCAGGCTGGACATGTCCGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CAA 72 bp CCTTCTGACAACAGCCTGCTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAACAGGGCTGCATCCTTG +
Preference number: 6 (lower is better)
Translates to: PSDNSLLTSCIL*ARAASNRAASL
Trigger: CAAGGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294053.9
ENST00000538039.6
ENST00000543042.6
ENST00000646117.1
CDS CAA 72 bp AGGACCTGTACCACACTGCTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAACAGGGCTGCATCCTTG +
Preference number: 6 (lower is better)
Translates to: RTCTTLLTSCIL*ARAASNRAASL
Trigger: CAAGGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGTGTGGTACAGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340729.9
CDS CAA 72 bp CCTTCTGACAACAGCCTGCTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAACAGGGCTGCATCTCCA +
Preference number: 6 (lower is better)
Translates to: PSDNSLLTSCIL*ARAASNRAASP
Trigger: TGGAGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445069.4
CDS CAA 72 bp GCACCTTCTGACAACAGCCTGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCT +
Preference number: 6 (lower is better)
Translates to: APSDNSLLTSCI*LARAASNRAAS
Trigger: AGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445069.4
ENST00000539148.3
ENST00000544683.5
CDS CAA 72 bp GAACTCGGACATGTCCAGCCTGATGAAGCCCTGCGCTaGGCAATTCAGCTCCAAGTCTGTGCTCTTAGCCAT +
Preference number: 6 (lower is better)
Translates to: ELGHVQPDEALR*AIQLQVCALSH
Trigger: ATGGCTAAGAGCACAGACTTGGAGCTGAATTGCCAAGCGCAGGGCTTCATCAGGCTGGACATGTCCGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CAA 72 bp TGCAGTCTCTTGGGGCTGCTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAACAGGGCTGCATCTGAA +
Preference number: 6 (lower is better)
Translates to: CSLLGLLTSCIL*ARAASNRAASE
Trigger: TTCAGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCCCAAGAGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642288.1
CDS CAA 72 bp CTTTGCAGTCTCTTGGGGCTGCTGACTTCTTGCATATaGTTGGCACGGGCAGCTTCCAACAGGGCTGCATCT +
Preference number: 6 (lower is better)
Translates to: LCSLLGLLTSCI*LARAASNRAAS
Trigger: AGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGCCCCAAGAGACTGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642288.1
CDS CAA 72 bp GACAACAGCCTGAGGGGCCATTCAGAGGAGGAAATCTaGGTGTTCTTCAGTGAGACTCCAGCATTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: DNSLRGHSEEEI*VFFSETPAFSP
Trigger: AGGGCTGAATGCTGGAGTCTCACTGAAGAACACCAAGATTTCCTCCTCTGAATGGCCCCTCAGGCTGTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437826.6
ENST00000535990.5
ENST00000642288.1
CDS CAA 72 bp CCTTCTGACAACAGCCTGCTGACTTCTTGCATATTGTaGGCACGGGCAGCTTCCAACAGGGCTGCATCTGAA +
Preference number: 6 (lower is better)
Translates to: PSDNSLLTSCIL*ARAASNRAASE
Trigger: TTCAGATGCAGCCCTGTTGGAAGCTGCCCGTGCCAACAATATGCAAGAAGTCAGCAGGCTGTTGTCAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539148.3
ENST00000544683.5
CDS CAA 72 bp CAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTTGTaGAAGTCATCCTCTCGGGTGATCAGGATATGTTCC +
Preference number: 6 (lower is better)
Translates to: QPLKLARLFSLL*KSSSRVIRICS
Trigger: GGAACATATCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544382.5
CDS CAA 72 bp GTGCAGCCCTTGAAACTGGCGCGGTTGTTCAGCCTGTaGTTGAAGTCATCCTCTCGGGTGATCAGGATATGT +
Preference number: 6 (lower is better)
Translates to: VQPLKLARLFSL*LKSSSRVIRIC
Trigger: ACATATCCTGATCACCCGAGAGGATGACTTCAACAACAGGCTGAACAACCGCGCCAGTTTCAAGGGCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544382.5
CDS CAA 90 bp TGGTGTTCTTCAGTGAGACTCCAGCATTCAGCCCTGCCCAGCTTCTaGACTGAGCATCATTCTTTGCAGTCTCTTGGGGCTGCTGACTTC +
Preference number: 6 (lower is better)
Translates to: WCSSVRLQHSALPSF*TEHHSLQSLGAADF
Trigger: GAAGTCAGCAGCCCCAAGAGACTGCAAAGAATGATGCTCAGTCAAGAAGCTGGGCAGGGCTGAATGCTGGAGTCTCACTGAAGAACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437826.6
ENST00000535990.5
ENST00000642288.1
CDS GCA 72 bp CACACTGTTGTTTCGGTTGATGGCTGCCACCATGAGTaGTGTCCAGCCAAGTCTGTGCTTTGCATTGACATC +
Preference number: 6 (lower is better)
Translates to: HTVVSVDGCHHE*CPAKSVLCIDI
Trigger: GATGTCAATGCAAAGCACAGACTTGGCTGGACAGCACTCATGGTGGCAGCCATCAACCGAAACAACAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000294053.9
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000539148.3
ENST00000543042.6
ENST00000544683.5
ENST00000642288.1
ENST00000646117.1
CDS CCA 72 bp CCATCTCAGGACTGCGTGGAGGGCCCACTAAGACAGTaGCAGTACTTTAGAAACGTGGACTTTGACAAGCAA +
Preference number: 6 (lower is better)
Translates to: PSQDCVEGPLRQ*QYFRNVDFDKQ
Trigger: TTGCTTGTCAAAGTCCACGTTTCTAAAGTACTGCCACTGTCTTAGTGGGCCCTCCACGCAGTCCTGAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544683.5
CDS CCA 72 bp AGTCTTGTAAACACTGCTGAAATCATCTCCAAGGTTTaGATCAGCCCCAGCAGCAAGCAGGACCTGTACCAC +
Preference number: 6 (lower is better)
Translates to: SLVNTAEIISKV*ISPSSKQDLYH
Trigger: GTGGTACAGGTCCTGCTTGCTGCTGGGGCTGATCCAAACCTTGGAGATGATTTCAGCAGTGTTTACAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000294053.9
ENST00000340729.9
ENST00000437826.6
ENST00000445069.4
ENST00000535477.6
ENST00000535990.5
ENST00000538039.6
ENST00000539148.3
ENST00000543042.6
ENST00000544683.5
ENST00000642288.1
ENST00000646117.1
CDS CCA 72 bp GGAGAGGTAGTCCACAGCCCTAAGCCTTTCCCCAGCTaGAGAATAAATAAACTACGTTTCCCAGAAGGCTGT +
Preference number: 6 (lower is better)
Translates to: GEVVHSPKPFPS*RINKLRFPEGC
Trigger: ACAGCCTTCTGGGAAACGTAGTTTATTTATTCTCCAGCTGGGGAAAGGCTTAGGGCTGTGGACTACCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437826.6
CDS CAA 72 bp TCAGCCCTGCCCAGCTTCTTGACTGAGCATCATTCTTaGCAGTCTCTTGGGGCTGCTGACTTCTTGCATATT +
Preference number: 6 (lower is better)
Translates to: SALPSFLTEHHS*QSLGAADFLHI
Trigger: AATATGCAAGAAGTCAGCAGCCCCAAGAGACTGCAAAGAATGATGCTCAGTCAAGAAGCTGGGCAGGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000437826.6
ENST00000535990.5
ENST00000642288.1
CDS CAA 72 bp AAGGGTGTGTGTCCCATTTCATTCCTCTGCAGGGGGTaGGCTCCAGAATGTTTTCAAGGTTCATCCATGTGG +
Preference number: 6 (lower is better)
Translates to: KGVCPISFLCRG*APECFQGSSMW
Trigger: CCACATGGATGAACCTTGAAAACATTCTGGAGCCAACCCCCTGCAGAGGAATGAAATGGGACACACACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645105.1
CDS TCA 72 bp TCAATTCTCTGGAGGAACCTCCATCAAGCAGCTCCTTaGCAGTGCGGTAGTCATCAGCAAGAACAGCATAGT +
Preference number: 6 (lower is better)
Translates to: SILWRNLHQAAP*QCGSHQQEQHS
Trigger: ACTATGCTGTTCTTGCTGATGACTACCGCACTGTCAAGGAGCTGCTTGATGGAGGTTCCTCCAGAGAATTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445069.4
ENST00000646117.1
CDS GCA 72 bp ATGAATGTCGGACGACAGATGGACTATAGACTCTCGTaGTTACTTATGTCAAGTGACCTGGGTTCTCACCCT +
Preference number: 6 (lower is better)
Translates to: MNVGRQMDYRLS*LLMSSDLGSHP
Trigger: AGGGTGAGAACCCAGGTCACTTGACATAAGTAAGCACGAGAGTCTATAGTCCATCTGTCGTCCGACATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS GCA 72 bp CAGGGGGTTGGCTCCTGCAATATTCTGAGTAAAGTATaGTGCTTCATACTCCATGCCTTTGAACACGTTGCT +
Preference number: 6 (lower is better)
Translates to: QGVGSCNILSKV*CFILHAFEHVA
Trigger: AGCAACGTGTTCAAAGGCATGGAGTATGAAGCAGCATACTTTACTCAGAATATTGCAGGAGCCAACCCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645650.1
CDS GCA 72 bp GACCCAATAAACTTGGCCACCTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGCTTGGCCAGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: DPINLATFLASL*IYLAVCLASSV
Trigger: AACAGAGCTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGTGGCCAAGTTTATTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS GCA 72 bp TGGAAACAAGCAAGTACCAACTTTTTAGCATCTTTGTaGATATATTTGGCTGTCTGCTTGGCCAGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: WKQASTNFLASL*IYLAVCLASSV
Trigger: AACAGAGCTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGTTGGTACTTGCTTGTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538021.5
CDS CCA 72 bp TTCATATCTTGGTTTAGTCTTCACATCCAGTATGTATaGGGCTACTCAAGTCAGAGCCAATTCTCCTCTACT +
Preference number: 6 (lower is better)
Translates to: FISWFSLHIQYV*GYSSQSQFSST
Trigger: AGTAGAGGAGAATTGGCTCTGACTTGAGTAGCCCCATACATACTGGATGTGAAGACTAAACCAAGATATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646117.1
CDS GCA 72 bp ACCTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTTCCTATTCCAGATGAT +
Preference number: 6 (lower is better)
Translates to: TFLASLCIYLAV*LASSVFPIPDD
Trigger: ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543042.6
CDS CCA 72 bp ACTATAGACTCTCGTGCTTACTTATGTCAAGTGACCTaGGTTCTCACCCTAGTTCTTCTAATGATTTGCTAT +
Preference number: 6 (lower is better)
Translates to: TIDSRAYLCQVT*VLTLVLLMICY
Trigger: ATAGCAAATCATTAGAAGAACTAGGGTGAGAACCCAGGTCACTTGACATAAGTAAGCACGAGAGTCTATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CAA 90 bp ACCTGGGTTCTCACCCTAGTTCTTCTAATGATTTGCTATGTAATTTaGAACAAGTTTTTGGGCTTGACTTTCTTGGCCGGAATCATCATT +
Preference number: 6 (lower is better)
Translates to: TWVLTLVLLMICYVI*NKFLGLTFLAGIII
Trigger: AATGATGATTCCGGCCAAGAAAGTCAAGCCCAAAAACTTGTTCAAAATTACATAGCAAATCATTAGAAGAACTAGGGTGAGAACCCAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CAA 90 bp CTTATGTCAAGTGACCTGGGTTCTCACCCTAGTTCTTCTAATGATTaGCTATGTAATTTTGAACAAGTTTTTGGGCTTGACTTTCTTGGC +
Preference number: 6 (lower is better)
Translates to: LMSSDLGSHPSSSND*LCNFEQVFGLDFLG
Trigger: GCCAAGAAAGTCAAGCCCAAAAACTTGTTCAAAATTACATAGCAAATCATTAGAAGAACTAGGGTGAGAACCCAGGTCACTTGACATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS GCA 72 bp AACTTTTTAGCATCTTTGTGCATATATTTGGCTGTCTaGTTGGCCAGCTCTGTTTTTCCTATTCCAGATGAT +
Preference number: 6 (lower is better)
Translates to: NFLASLCIYLAV*LASSVFPIPDD
Trigger: ATCATCTGGAATAGGAAAAACAGAGCTGGCCAAGCAGACAGCCAAATATATGCACAAAGATGCTAAAAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538021.5
CDS CAA 72 bp CTCACCCTAGTTCTTCTAATGATTTGCTATGTAATTTaGAACAAGTTTTTGGGCTTGACTTTCTTGGCCGGA +
Preference number: 6 (lower is better)
Translates to: LTLVLLMICYVI*NKFLGLTFLAG
Trigger: TCCGGCCAAGAAAGTCAAGCCCAAAAACTTGTTCAAAATTACATAGCAAATCATTAGAAGAACTAGGGTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646359.1
CDS CAA 72 bp AGTGACCTGGGTTCTCACCCTAGTTCTTCTAATGATTaGCTATGTAATTTTGAACAAGTTTTTGGGCTTGAC +
Preference number: 6 (lower is better)
Translates to: SDLGSHPSSSND*LCNFEQVFGLD
Trigger: GTCAAGCCCAAAAACTTGTTCAAAATTACATAGCAAATCATTAGAAGAACTAGGGTGAGAACCCAGGTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646359.1