RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000172409

Ensembl transcript IDs: ENST00000302731.4, ENST00000525602.1, ENST00000529430.1, ENST00000529773.2, ENST00000533682.2, ENST00000533905.1, ENST00000681650.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTCGTTCTTGATCCAGAACAACAACGACATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGCCTGGTAACCAGAGCCCTTGACCCA +
Preference number: 1 (lower is better)
Translates to: QSFLIQNNNDIHLKS*GCMHQSLVTRALDP
Trigger: TGGGTCAAGGGCTCTGGTTACCAGGCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR TCA 90 bp ACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTaGTCCAGAACAACAACGACATCCACCTCAAAAGCTGAGGCTGCA +
Preference number: 1 (lower is better)
Translates to: TKWGRSRFSSLYSRS*SRTTTTSTSKAEAA
Trigger: TGCAGCCTCAGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR CCA 90 bp ATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTaGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTC +
Preference number: 1 (lower is better)
Translates to: MQFSRVLENSKWHLR*SKKPITVSWFSFWF
Trigger: GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR CCA 90 bp TCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATaGTTTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTA +
Preference number: 1 (lower is better)
Translates to: SKWHLRWSKKPITVS*FSFWFKIRRVRLPL
Trigger: TAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR CCA 90 bp ACAGTGAAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTaGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTT +
Preference number: 1 (lower is better)
Translates to: TVKEMQFSRVLENSK*HLRWSKKPITVSWF
Trigger: AAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTTCACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR-3UTR TCA 90 bp TTGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGC +
Preference number: 2 (lower is better)
Translates to: LERSTTPPDLGSSTVRTKIHLKS*GCMHQS
Trigger: GCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGAT...CTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR-3UTR CCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATC +
Preference number: 2 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWSLLVR*PQQSFI
Trigger: GATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR-3UTR CCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATC +
Preference number: 2 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGSLLVR*PQQSFI
Trigger: GATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR-3UTR CCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATC +
Preference number: 2 (lower is better)
Translates to: FPFGSRLEESGYHYLFLESLLVR*PQQSFI
Trigger: GATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR TCA 72 bp TTTATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATaGTCTCTATGTCCCAGGCAGCAAGGCTTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: FISAHLPLGVAR*SLCPRQQGFLL
Trigger: CAGCAGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR CCA 72 bp CCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTaGGGGAGGTCCCGTTTCAGTTCATTGTACAGTCGT +
Preference number: 3 (lower is better)
Translates to: PPDLGSSTVRTK*GRSRFSSLYSR
Trigger: ACGACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR TCA 72 bp TTGATCCAGAACAACAACGACATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGCCTGGTAACCAGAGCC +
Preference number: 3 (lower is better)
Translates to: LIQNNNDIHLKS*GCMHQSLVTRA
Trigger: GGCTCTGGTTACCAGGCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR TCA 72 bp GGGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTaGTCCAGAACAACAACGACATCCACCTCAAAAGCT +
Preference number: 3 (lower is better)
Translates to: GRSRFSSLYSRS*SRTTTTSTSKA
Trigger: AGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR CCA 72 bp ATGAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCT +
Preference number: 3 (lower is better)
Translates to: MNFLLVHSLLVR*PQQSFISAHLP
Trigger: AGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR CCA 72 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTaGTCTAAGAAACCAATTACAGTCTCATGGTTTTCC +
Preference number: 3 (lower is better)
Translates to: SRVLENSKWHLR*SKKPITVSWFS
Trigger: GGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
3UTR CCA 72 bp GAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTaGCATCTTAGGTGGTCTAAGAAACCAATTACAGTC +
Preference number: 3 (lower is better)
Translates to: EMQFSRVLENSK*HLRWSKKPITV
Trigger: GACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCACCCGCCGGAAGTCCTTaGAGCGCTCCACCACACCCC +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAPAGSP*SAPPHP
Trigger: GGGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGG...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACCAGAGCCCTTGACCCAGCCACAGGTGTTAATGACACAGCCACTCACAGATGCCCCGCCGGAAGTCCTTaGAGCGCTCCACCACACCCC +
Preference number: 4 (lower is better)
Translates to: TRALDPATGVNDTATHRCPAGSP*SAPPHP
Trigger: GGGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGG...GCATCTGTGAGTGGCTGTGTCATTAACACCTGTGGCTGGGTCAAGGGCTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp ACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCGTGCGGCCGCTCAGTTaGACAGAACAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: TTPPDLGSSTVRTKWGRSVRPLS*TEQPCQ
Trigger: TTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCAC...GGACCTCCCCCACTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp GGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTGCCATGGTACCAGGGATaGACACAGAACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GALHHTPRFREQHSAYKVPWYQG*TQNPGP
Trigger: TGGGCCAGGGTTCTGTGTCCATCCCTGGTACCATGG...CACTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp GGGAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACTGTAGCTGCTGTGCCTaGGCAGCCAGGAGCCCAACA +
Preference number: 4 (lower is better)
Translates to: GSSTVRTKWGRSRFSSLYCSCCA*AARSPT
Trigger: TGTTGGGCTCCTGGCTGCGCAGGCACAGCAGCTACA...GTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp TCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTGTGCGGCCGCTCAGTTaGACAGAACAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: SASRGGQMISMSQAARLPVRPLS*TEQPCQ
Trigger: TTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCAC...AGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTTGTAGAGGGCCCCCATaGTACCAGGGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: SASRGGQMISMSQAARLPCRGPP*YQGWTQ
Trigger: CTGTGTCCATCCCTGGTACCATGGGGGCCCTCTACA...AGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TCCTTGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACATTCGGGTCAGCTCTGTaGCAAAGATCTCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: SLERSTTPPDLGSSTVRTFGSAL*QRSLPC
Trigger: GCATGGCAGAGATCTTTGGCACAGAGCTGACCCGAA...TGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp GGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTGACAGTGCGTACAAAGTaGGGGAGGTCCCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: GALHHTPRFREQHSAYKVTVRTK*GRSRFS
Trigger: ACTGAAACGGGACCTCCCCCACTTTGTACGCACTGT...CACTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCACCATGGTACCAGGGATaGACACAGAACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAPWYQG*TQNPGP
Trigger: TGGGCCAGGGTTCTGTGTCCATCCCTGGTACCATGG...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGTACACCAGAGGGGCCTaGATAGAGAAACCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: SPSASRGGQMISMSQAARYTRGA*IEKPSS
Trigger: CGAAGAGGGTTTCTCTATCCAGGCCCCTCTGGTGTA...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CCAGAGCCCTTGACCCAGCCACAGGTGTTAATGACACAGCCACTCACAGATGCCAACAGCCATGCCAAGTaGAAACAGCCACCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PEPLTQPQVLMTQPLTDANSHAK*KQPPWH
Trigger: GTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTT...GGCATCTGTGAGTGGCTGTGTCATTAACACCTGTGGCTGGGTCAAGGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp AGCCTGGTAACCAGAGCCCTTGACCCAGCCACAGGTGTTAATGACACAGCCACTAACGCACTGCGTAGTTaGGCAGAAGGCGACACACTG +
Preference number: 4 (lower is better)
Translates to: SLVTRALDPATGVNDTATNALRS*AEGDTL
Trigger: CAGTGTGTCGCCTTCTGCTCAACTACGCAGTGCGTT...AGTGGCTGTGTCATTAACACCTGTGGCTGGGTCAAGGGCTCTGGTTACCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGTGGTGGAACCAAAATaGTACACCAGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAVVEPK*YTRGAW
Trigger: CCAGGCCCCTCTGGTGTATCATTTTGGTTCCACCAC...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGACTACAAGCGGTTCTTaGCCGGACCCACGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: EQHSAYKVGEVPFQFIVQTTSGS*PDPRRK
Trigger: TTTCCGGCGTGGGTCCGGGCAAGAACCGCTTGTAGT...CTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGTCTTCCTTTTCCGCTTaGCTCCGCATCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPSASRGGQMISMSQAARSSFSA*LRICSK
Trigger: CTTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGA...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GGGAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACACCCTCTTCGACATCTaGAGGCCGCTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: GSSTVRTKWGRSRFSSLYTLFDI*RPLDVE
Trigger: CTCTACATCGAGCGGCCTGCAGATGTCGAAGAGGGT...GTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGCCAGCTCCACATAAGTaGGACGGCGGCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRPAPHK*DGGPNA
Trigger: TGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCTGG...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGTCCAGCTCCACATAAGTaGGACGGCGGCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: SSTVRTKWGRSRFSSLYSPAPHK*DGGPNA
Trigger: TGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCTGG...ACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCAGCTCCACATAAGTaGGACGGCGGCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLPAPHK*DGGPNA
Trigger: TGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCTGG...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAATGGACACAGAACCCTaGCCCACATCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAMDTEP*PTSSST
Trigger: TGTGGAGCTGGATGTGGGCCAGGGTTCTGTGTCCAT...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp GAACAACAACGACATCCACCTCAAAAGCTGAGGCTGCATGCACCAGAGCCTGGTTGTAGAGGGCCCCCATaGTACCAGGGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: EQQRHPPQKLRLHAPEPGCRGPP*YQGWTQ
Trigger: CTGTGTCCATCCCTGGTACCATGGGGGCCCTCTACA...ACCAGGCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGATGTCGTTGTTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp TTGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTACACCAGAGGGGCCTaGATAGAGAAACCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LERSTTPPDLGSSTVRTKYTRGA*IEKPSS
Trigger: CGAAGAGGGTTTCTCTATCCAGGCCCCTCTGGTGTA...CTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCACAACTCCAACTGAACTaGCTGAGATGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAQLQLN*LRCLHL
Trigger: GAGGTGGAGGCATCTCAGTCAGTTCAGTTGGAGTTG...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTCACTGGTCACCACAATaGAGCCAGCTACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: SASRGGQMISMSQAARLPHWSPQ*SQLHLS
Trigger: AGACAAGTGTAGCTGGCTTCATTGTGGTGACCAGTG...AGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTAGAACAGTAAACACCTaGTGCTCCAGGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: SASRGGQMISMSQAARLPRTVNT*CSRSTL
Trigger: CAGTGTGGACCTGGAGCATCAGGTGTTTACTGTTCT...AGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGAGCAAGGCTTCCTGCTaGTCTCTACTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: SPSASRGGQMISMSQAARSKASC*SLLQIH
Trigger: ATGGATCTGAAGTAGAGATCAGCAGGAAGCCTTGCT...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGACTACAAGCGGTTCTTaGCCGGACCCACGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRTTSGS*PDPRRK
Trigger: TTTCCGGCGTGGGTCCGGGCAAGAACCGCTTGTAGT...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR GCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGTCTCTTCTGTGTAGCTaGTGTGCCTGCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLSLLCS*CACAAR
Trigger: CCTGGCTGCGCAGGCACAGCAGCTACACAGAAGAGA...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR GCA 90 bp TTGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTGCACAGAACAGCCATaGCAAGTGAAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: LERSTTPPDLGSSTVRTKCTEQP*QVKTAT
Trigger: GGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCA...CTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCGTGCGGCCGCTCAGTTaGACAGAACAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLVRPLS*TEQPCQ
Trigger: TTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCAC...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAACAGCCACTCACAGATaGCCTTCGGTTCACCTCACA +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQATATHR*PSVHLT
Trigger: TGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGT...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCGCGGCCCAAACGCACTaGGTAGTTGAGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISAAAQTH*VVEQKA
Trigger: CGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGC...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGACCCTCTTCGACATCTaGAGGCCGCTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: LLVRWPQQSFISAHLPLGTLFDI*RPLDVE
Trigger: CTCTACATCGAGCGGCCTGCAGATGTCGAAGAGGGT...CCCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTCACCCACAGAGTCACTaGTGTTTGTCCCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASHPQSH*CLSLPL
Trigger: CAGGGGCAGGGACAAACAGCAGTGACTCTGTGGGTG...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CCA 90 bp GAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGACTTGCCCACATCAGTaGGGCCCACTACCATCACTC +
Preference number: 4 (lower is better)
Translates to: EQHSAYKVGEVPFQFIVQTCPHQ*GPLPSL
Trigger: GAGTGATGGTAGTGGGCCCCACTGATGTGGGCAAGT...CTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAACAGTGCGTACAAAGTaGGGGAGGTCCCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQATVRTK*GRSRFS
Trigger: ACTGAAACGGGACCTCCCCCACTTTGTACGCACTGT...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAAACAGGAGTCTGGGATaGTGGGTGCCCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQANRSLG*WVPQLC
Trigger: ACAAAGTTGGGGCACCCACCATCCCAGACTCCTGTT...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGATGGACACAGAACCCTaGCCCACATCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LLVRWPQQSFISAHLPLGMDTEP*PTSSST
Trigger: TGTGGAGCTGGATGTGGGCCAGGGTTCTGTGTCCAT...CCCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCCCATGGTACCAGGGATaGACACAGAACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLPWYQG*TQNPGP
Trigger: TGGGCCAGGGTTCTGTGTCCATCCCTGGTACCATGG...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCATACACCAGAGGGGCCTaGATAGAGAAACCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAYTRGA*IEKPSS
Trigger: CGAAGAGGGTTTCTCTATCCAGGCCCCTCTGGTGTA...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCTCGGAGGCTGGCGCGTaGGCAGAAGGCAATCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISASEAGA*AEGNLP
Trigger: AGGAAGATTGCCTTCTGCCCACGCGCCAGCCTCCGA...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR TCA 90 bp GAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGCAACTCCAACTGAACTaGCTGAGATGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: EQHSAYKVGEVPFQFIVQQLQLN*LRCLHL
Trigger: GAGGTGGAGGCATCTCAGTCAGTTCAGTTGGAGTTG...CTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp GGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTGCACCAGCATCAAAGGTaGATTTCTTGTTTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GALHHTPRFREQHSAYKVHQHQR*ISCFGS
Trigger: TGACCCGAAACAAGAAATTCACCTTTGATGCTGGTG...CACTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLIHLKS*GCMHQS
Trigger: GCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGAT...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAAGAACAGTAAACACCTaGTGCTCCAGGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQARTVNT*CSRSTL
Trigger: CAGTGTGGACCTGGAGCATCAGGTGTTTACTGTTCT...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGTGGTGGAACCAAAATaGTACACCAGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRVVEPK*YTRGAW
Trigger: CCAGGCCCCTCTGGTGTATCATTTTGGTTCCACCAC...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGTGTGGTGGAACCAAAATaGTACACCAGAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSTVRTKWGRSRFSSLYSVVEPK*YTRGAW
Trigger: CCAGGCCCCTCTGGTGTATCATTTTGGTTCCACCAC...ACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp CTTGATCCAGAACAACAACGACATCCACCTCAAAAGCTGAGGCTGCATGCACCATCTCTTCTGTGTAGCTaGTGTGCCTGCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LDPEQQRHPPQKLRLHAPSLLCS*CACAAR
Trigger: CCTGGCTGCGCAGGCACAGCAGCTACACAGAAGAGA...TGGTGCATGCAGCCTCAGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGACCCTCTTCGACATCTaGAGGCCGCTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRTLFDI*RPLDVE
Trigger: CTCTACATCGAGCGGCCTGCAGATGTCGAAGAGGGT...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGTGTAGCTGCTGTGCCTaGTTATCGGAGCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRCSCCA*LSEPTG
Trigger: CCCTGTTGGCTCCGATAAGCAGGCACAGCAGCTACA...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGACTTGCCCACATCAGTaGGGCCCACTACCATCACTC +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLTCPHQ*GPLPSL
Trigger: GAGTGATGGTAGTGGGCCCCACTGATGTGGGCAAGT...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGACTTGCCCACATCAGTaGGGCCCACTACCATCACTC +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRTCPHQ*GPLPSL
Trigger: GAGTGATGGTAGTGGGCCCCACTGATGTGGGCAAGT...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCACTAACACTCAGTAGGTaGTGCACCATATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQALTLSR*CTISRP
Trigger: TGGGCGAGATATGGTGCACCACCTACTGAGTGTTAG...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGAAGTTCTTAGGCAGTaGGCGAGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLEVLRQ*ARGWRQ
Trigger: CTGTCTCCAGCCCCTCGCCCACTGCCTAAGAACTTC...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCAGCCACTCGGAGGCTaGCGCGTGGGCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYQPLGG*RVGRRQ
Trigger: TTGCCTTCTGCCCACGCGCCAGCCTCCGAGTGGCTG...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR TCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCAACTCCAACTGAACTaGCTGAGATGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLQLQLN*LRCLHL
Trigger: GAGGTGGAGGCATCTCAGTCAGTTCAGTTGGAGTTG...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGAACAGCCATGCCAAGTaGAAACAGCCACCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRNSHAK*KQPPWH
Trigger: GTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTT...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAACAGCCATGCCAAGTaGAAACAGCCACCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASNSHAK*KQPPWH
Trigger: GTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTT...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCACCTCACACCTTTGGTTaGACACATCTGCTAAACGAG +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAPHTFG*THLLNE
Trigger: CTCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGG...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLIHLKS*GCMHQS
Trigger: GCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGAT...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAAACGCACTGCGTAGTTaGGCAGAAGGCGACACACTG +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLNALRS*AEGDTL
Trigger: CAGTGTGTCGCCTTCTGCTCAACTACGCAGTGCGTT...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CGACATCCACCTCAAAAGCTGAGGCTGCATGCACCAGAGCCTGGTAACCAGAGCCAAAGATCTCTGCCATaGCAGTCAACAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: RHPPQKLRLHAPEPGNQSQRSLP*QSTTPT
Trigger: AGTTGGAGTTGTTGACTGGCATGGCAGAGATCTTTG...GCTCTGGTTACCAGGCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGATGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp TCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTCAAAGATCTCTGCCATaGCAGTCAACAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: SASRGGQMISMSQAARLPQRSLP*QSTTPT
Trigger: AGTTGGAGTTGTTGACTGGCATGGCAGAGATCTTTG...AGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGTCTTCCTTTTCCGCTTaGCTCCGCATCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: LLVRWPQQSFISAHLPLGSSFSA*LRICSK
Trigger: CTTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGA...CCCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCACAGCCACTCACAGATaGCCTTCGGTTCACCTCACA +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLTATHR*PSVHLT
Trigger: TGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGT...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGTCTGGGATGGTGGGTaGCCCAACTTTGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAVWDGG*PNFVDF
Trigger: AAAATCTACAAAGTTGGGGCACCCACCATCCCAGAC...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGACACTCAGTAGGTGGTaGACCATATCTCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLTLSRW*TISRPG
Trigger: TCCTGGGCGAGATATGGTGCACCACCTACTGAGTGT...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTACAGTGCGTACAAAGTaGGGGAGGTCCCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASTVRTK*GRSRFS
Trigger: ACTGAAACGGGACCTCCCCCACTTTGTACGCACTGT...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGACAGTGCGTACAAAGTaGGGGAGGTCCCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRTVRTK*GRSRFS
Trigger: ACTGAAACGGGACCTCCCCCACTTTGTACGCACTGT...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTGATCCAGATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: YKVGEVPFQFIVQSFLIQIHLKS*GCMHQS
Trigger: GCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGAT...CTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGCACTGGTCACCACAATaGAGCCAGCTACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRHWSPQ*SQLHLS
Trigger: AGACAAGTGTAGCTGGCTTCATTGTGGTGACCAGTG...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCTTCGGGTCAGCTCTGTaGCAAAGATCTCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISAFGSAL*QRSLPC
Trigger: GCATGGCAGAGATCTTTGGCACAGAGCTGACCCGAA...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTGCACAGAACAGCCATaGCAAGTGAAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLCTEQP*QVKTAT
Trigger: GGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCA...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGTCTTCCTTTTCCGCTTaGCTCCGCATCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLSSFSA*LRICSK
Trigger: CTTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGA...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTTCTTCCTTTTCCGCTTaGCTCCGCATCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASSSFSA*LRICSK
Trigger: CTTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGA...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAACAGCCACTCACAGATaGCCTTCGGTTCACCTCACA +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLTATHR*PSVHLT
Trigger: TGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGT...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCACACTCAGTAGGTGGTaGACCATATCTCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISATLSRW*TISRPG
Trigger: TCCTGGGCGAGATATGGTGCACCACCTACTGAGTGT...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CCCGTTTCAGTTCATTGTACAGTCGTTCTTGATCCAGAACAACAACGACATCCAGCGGCCCAAACGCACTaGGTAGTTGAGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: PVSVHCTVVLDPEQQRHPAAQTH*VVEQKA
Trigger: CGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGC...TGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTGAAACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGTTCACCTCACACCTTTaGTTGAACACATCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: SPSASRGGQMISMSQAARFTSHL*LNTSAK
Trigger: TTTAGCAGATGTGTTCAACCAAAGGTGTGAGGTGAA...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTCCCGCCGGAAGTCCTTaGAGCGCTCCACCACACCCC +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGPAGSP*SAPPHP
Trigger: GGGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGG...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCCCCGCCGGAAGTCCTTaGAGCGCTCCACCACACCCC +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFPAGSP*SAPPHP
Trigger: GGGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGG...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCAGGAGTCTGGGATGGTaGGTGCCCCAACTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISARSLGW*VPQLCR
Trigger: TCTACAAAGTTGGGGCACCCACCATCCCAGACTCCT...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGCTAACACTCAGTAGGTaGTGCACCATATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRLTLSR*CTISRP
Trigger: TGGGCGAGATATGGTGCACCACCTACTGAGTGTTAG...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCCTAACACTCAGTAGGTaGTGCACCATATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLLTLSR*CTISRP
Trigger: TGGGCGAGATATGGTGCACCACCTACTGAGTGTTAG...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCTACACCAGAGGGGCCTaGATAGAGAAACCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISAYTRGA*IEKPSS
Trigger: CGAAGAGGGTTTCTCTATCCAGGCCCCTCTGGTGTA...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTACACTGGTCACCACAATaGAGCCAGCTACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLHWSPQ*SQLHLS
Trigger: AGACAAGTGTAGCTGGCTTCATTGTGGTGACCAGTG...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAAGAACAGTAAACACCTaGTGCTCCAGGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLRTVNT*CSRSTL
Trigger: CAGTGTGGACCTGGAGCATCAGGTGTTTACTGTTCT...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGAGCAAGGCTTCCTGCTaGTCTCTACTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLSKASC*SLLQIH
Trigger: ATGGATCTGAAGTAGAGATCAGCAGGAAGCCTTGCT...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTGTGCCAAAGATCTCTaGCATGCCAGTCAACAACTC +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLCAKDL*HASQQL
Trigger: GAGTTGTTGACTGGCATGGCAGAGATCTTTGGCACA...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCATATCCTCTTGAGACATaGCCAAAGGTAAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: YLSPSASRGGQMISMSQAYPLET*PKVNRS
Trigger: ACTCCTGTTTACCTTTGGGCATGTCTCAAGAGGATA...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCTAACACTCAGTAGGTaGTGCACCATATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISALTLSR*CTISRP
Trigger: TGGGCGAGATATGGTGCACCACCTACTGAGTGTTAG...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATGAAGTTCTTAGGCAGTaGGCGAGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYEVLRQ*ARGWRQ
Trigger: CTGTCTCCAGCCCCTCGCCCACTGCCTAAGAACTTC...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTACCTCACACCTTTGGTTaGACACATCTGCTAAACGAG +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLPHTFG*THLLNE
Trigger: CTCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGG...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCCAAAGATCTCTGCCATaGCAGTCAACAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLQRSLP*QSTTPT
Trigger: AGTTGGAGTTGTTGACTGGCATGGCAGAGATCTTTG...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTATGTGCCAAAGATCTCTaGCATGCCAGTCAACAACTC +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLCAKDL*HASQQL
Trigger: GAGTTGTTGACTGGCATGGCAGAGATCTTTGGCACA...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTGATCCAGTCTTCCTTTTCCGCTTaGCTCCGCATCTGTTCCAAG +
Preference number: 4 (lower is better)
Translates to: YKVGEVPFQFIVQSFLIQSSFSA*LRICSK
Trigger: CTTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGA...CTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp GGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTGATCCAGAACAACAACGAACAGCCACTCACAGATaGCCTTCGGTTCACCTCACA +
Preference number: 4 (lower is better)
Translates to: GGPVSVHCTVVLDPEQQRTATHR*PSVHLT
Trigger: TGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGT...TCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGTCTGGGATGGTGGGTaGCCCAACTTTGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLVWDGG*PNFVDF
Trigger: AAAATCTACAAAGTTGGGGCACCCACCATCCCAGAC...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGGCGGCCCAAACGCACTaGGTAGTTGAGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWAAQTH*VVEQKA
Trigger: CGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGC...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAAGCGGCCCAAACGCACTaGGTAGTTGAGCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKAAQTH*VVEQKA
Trigger: CGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGC...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCAGTGGGCGAGGGGCTaGAGACAGAACAGTAAACAC +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYQWARG*RQNSKH
Trigger: GTGTTTACTGTTCTGTCTCCAGCCCCTCGCCCACTG...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTCCAGCTCCACATAAGTaGGACGGCGGCCCAAACGCA +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPIPAPHK*DGGPNA
Trigger: TGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCTGG...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AAGTCCTTGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTTTCACCTCACACCTTTaGTTGAACACATCTTATTAT +
Preference number: 4 (lower is better)
Translates to: KSLERSTTPPDLGSSTVRFTSHL*LNTSYY
Trigger: ATAATAAGATGTGTTCAACCAAAGGTGTGAGGTGAA...ACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAAGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
3UTR CAA 72 bp GGGGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTaGATCCAGAACAACAACGACATCCACCTCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GEVPFQFIVQSF*IQNNNDIHLKS
Trigger: GCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR TCA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCACCAGCATCAAAGGTaGATTTCTTGTTTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLVHSLLVRWPQQSFISAHQHQR*ISCFGS
Trigger: TGACCCGAAACAAGAAATTCACCTTTGATGCTGGTG...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTGATCCAGTGTGCCAAAGATCTCTaGCATGCCAGTCAACAACTC +
Preference number: 4 (lower is better)
Translates to: YKVGEVPFQFIVQSFLIQCAKDL*HASQQL
Trigger: GAGTTGTTGACTGGCATGGCAGAGATCTTTGGCACA...CTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAAGTGCGGCCGCTCAGTTaGACAGAACAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKVRPLS*TEQPCQ
Trigger: TTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCAC...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGTATCCTCTTGAGACATaGCCAAAGGTAAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRYPLET*PKVNRS
Trigger: ACTCCTGTTTACCTTTGGGCATGTCTCAAGAGGATA...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGAAAGAAACATTTTCTaGCTTGTGCCCCAAAGCACA +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRERNIF*LVPQST
Trigger: TGTGCTTTGGGGCACAAGGCAGAAAATGTTTCTTTC...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATAACAGGAGTCTGGGATaGTGGGTGCCCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYNRSLG*WVPQLC
Trigger: ACAAAGTTGGGGCACCCACCATCCCAGACTCCTGTT...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLSLLVR*PQQSFI
Trigger: GATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CAGTTCATTGTACAGTCGTTCTTGATCCAGAACAACAACGACATCCACCTCAAAATGGACACAGAACCCTaGCCCACATCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: QFIVQSFLIQNNNDIHLKMDTEP*PTSSST
Trigger: TGTGGAGCTGGATGTGGGCCAGGGTTCTGTGTCCAT...TTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTGTAGAGGGCCCCCATaGTACCAGGGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWCRGPP*YQGWTQ
Trigger: CTGTGTCCATCCCTGGTACCATGGGGGCCCTCTACA...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAAATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKIHLKS*GCMHQS
Trigger: GCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGAT...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGAACGCACTGCGTAGTTaGGCAGAAGGCGACACACTG +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWNALRS*AEGDTL
Trigger: CAGTGTGTCGCCTTCTGCTCAACTACGCAGTGCGTT...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAAAACGCACTGCGTAGTTaGGCAGAAGGCGACACACTG +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKNALRS*AEGDTL
Trigger: CAGTGTGTCGCCTTCTGCTCAACTACGCAGTGCGTT...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp GAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCCGTTTCAGTTCATTGTACAGCCTCACACCTTTGGTTaGACACATCTTATTATAAAG +
Preference number: 4 (lower is better)
Translates to: EQHSAYKVGEVPFQFIVQPHTFG*THLIIK
Trigger: CTTTATAATAAGATGTGTTCAACCAAAGGTGTGAGG...CTGTACAATGAACTGAAACGGGACCTCCCCCACTTTGTACGCACTGTGCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR GCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCACTACAAGCGGTTCTTaGCCGGACCCACGCCGGAAA +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFTTSGS*PDPRRK
Trigger: TTTCCGGCGTGGGTCCGGGCAAGAACCGCTTGTAGT...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR GCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGTGTAGCTGCTGTGCCTaGGCAGCCAGGAGCCCAACA +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLECSCCA*AARSPT
Trigger: TGTTGGGCTCCTGGCTGCGCAGGCACAGCAGCTACA...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR GCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCTCTCTTCTGTGTAGCTaGTGTGCCTGCGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFSLLCS*CACAAR
Trigger: CCTGGCTGCGCAGGCACAGCAGCTACACAGAAGAGA...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR GCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATTGCACAGAACAGCCATaGCAAGTGAAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYCTEQP*QVKTAT
Trigger: GGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCA...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTGTGCGGCCGCTCAGTTaGACAGAACAGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGVRPLS*TEQPCQ
Trigger: TTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCAC...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTGCAGGTCAGTCATTTaGCCCGCAGCCAACAGGTTC +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWCRSVI*PAANRF
Trigger: GAACCTGTTGGCTGCGGGGCAAATGACTGACCTGCA...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529430.1
CDS-3UTR CCA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGTTCACCTCACACCTTTaGTTGAACACATCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLFTSHL*LNTSAK
Trigger: TTTAGCAGATGTGTTCAACCAAAGGTGTGAGGTGAA...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTTTCACCTCACACCTTTaGTTGAACACATCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASFTSHL*LNTSAK
Trigger: TTTAGCAGATGTGTTCAACCAAAGGTGTGAGGTGAA...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGCAGTGGGCGAGGGGCTaGAGACAGAACAGTAAACAC +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWQWARG*RQNSKH
Trigger: GTGTTTACTGTTCTGTCTCCAGCCCCTCGCCCACTG...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCGAAGTTCTTAGGCAGTaGGCGAGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFEVLRQ*ARGWRQ
Trigger: CTGTCTCCAGCCCCTCGCCCACTGCCTAAGAACTTC...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTATGGACACAGAACCCTaGCCCACATCCAGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPIMDTEP*PTSSST
Trigger: TGTGGAGCTGGATGTGGGCCAGGGTTCTGTGTCCAT...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCCCATGGTACCAGGGATaGACACAGAACCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFPWYQG*TQNPGP
Trigger: TGGGCCAGGGTTCTGTGTCCATCCCTGGTACCATGG...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGAACAGCCATGCCAAGTaGAAACAGCCACCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWNSHAK*KQPPWH
Trigger: GTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTT...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAAAACAGCCATGCCAAGTaGAAACAGCCACCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKNSHAK*KQPPWH
Trigger: GTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTT...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATAGCAAGGCTTCCTGCTaGTCTCTACTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYSKASC*SLLQIH
Trigger: ATGGATCTGAAGTAGAGATCAGCAGGAAGCCTTGCT...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTTCGGGTCAGCTCTGTaGCAAAGATCTCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWFGSAL*QRSLPC
Trigger: GCATGGCAGAGATCTTTGGCACAGAGCTGACCCGAA...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGACAGCCACTCACAGATaGCCTTCGGTTCACCTCACA +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWTATHR*PSVHLT
Trigger: TGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGT...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGACACTCAGTAGGTGGTaGACCATATCTCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWTLSRW*TISRPG
Trigger: TCCTGGGCGAGATATGGTGCACCACCTACTGAGTGT...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGACTGCTGTTTGTCCCTaGCCCTGGGAGAAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWTAVCP*PWEKVE
Trigger: TTCTACCTTCTCCCAGGGGCAGGGACAAACAGCAGT...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR GCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTTCCCTTCTTATCCTCTaGCTCCAGCACCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPISLLIL*LQHLQP
Trigger: TGGCTGAAGGTGCTGGAGGCAGAGGATAAGAAGGGA...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTACTTGCCCACATCAGTaGGGCCCACTACCATCACTC +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGTCPHQ*GPLPSL
Trigger: GAGTGATGGTAGTGGGCCCCACTGATGTGGGCAAGT...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTGCGTACAAAGTaGGGGAGGTCCCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPITVRTK*GRSRFS
Trigger: ACTGAAACGGGACCTCCCCCACTTTGTACGCACTGT...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGAGGAGTCTGGGATGGTaGGTGCCCCAACTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWRSLGW*VPQLCR
Trigger: TCTACAAAGTTGGGGCACCCACCATCCCAGACTCCT...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGAGGAGTCTGGGATGGTaGGTGCCCCAACTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWRSLGW*VPQLCR
Trigger: TCTACAAAGTTGGGGCACCCACCATCCCAGACTCCT...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTCAGTGGGCGAGGGGCTaGAGACAGAACAGTAAACAC +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGQWARG*RQNSKH
Trigger: GTGTTTACTGTTCTGTCTCCAGCCCCTCGCCCACTG...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTAGAAGTTCTTAGGCAGTaGGCGAGGGGCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVEVLRQ*ARGWRQ
Trigger: CTGTCTCCAGCCCCTCGCCCACTGCCTAAGAACTTC...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR CCA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGTTAGAGAATTCAAAGTaGCATCTTAGGTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRLENSK*HLRWSK
Trigger: CTTAGACCACCTAAGATGCCACTTTGAATTCTCTAA...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTATGTAGAGGGCCCCCATaGTACCAGGGATGGACACAG +
Preference number: 4 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVCRGPP*YQGWTQ
Trigger: CTGTGTCCATCCCTGGTACCATGGGGGCCCTCTACA...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529430.1
ENST00000533682.2
CDS-3UTR TCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTCAACTCCAACTGAACTaGCTGAGATGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGQLQLN*LRCLHL
Trigger: GAGGTGGAGGCATCTCAGTCAGTTCAGTTGGAGTTG...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTAATCCACCTCAAAAGCTaGGGCTGCATGCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVIHLKS*GCMHQS
Trigger: GCTCTGGTGCATGCAGCCTCAGCTTTTGAGGTGGAT...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR TCA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGCACTGGTCACCACAATaGAGCCAGCTACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWHWSPQ*SQLHLS
Trigger: AGACAAGTGTAGCTGGCTTCATTGTGGTGACCAGTG...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGAGAACAGTAAACACCTaGTGCTCCAGGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWRTVNT*CSRSTL
Trigger: CAGTGTGGACCTGGAGCATCAGGTGTTTACTGTTCT...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTCGGGTCAGCTCTGTaGCAAAGATCTCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGFGSAL*QRSLPC
Trigger: GCATGGCAGAGATCTTTGGCACAGAGCTGACCCGAA...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTACACTCAGTAGGTGGTaGACCATATCTCGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGTLSRW*TISRPG
Trigger: TCCTGGGCGAGATATGGTGCACCACCTACTGAGTGT...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGACCCTCTTCGACATCTaGAGGCCGCTCGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLETLFDI*RPLDVE
Trigger: CTCTACATCGAGCGGCCTGCAGATGTCGAAGAGGGT...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTAACTTGCCCACATCAGTaGGGCCCACTACCATCACTC +
Preference number: 4 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVTCPHQ*GPLPSL
Trigger: GAGTGATGGTAGTGGGCCCCACTGATGTGGGCAAGT...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR TCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGCAACTCCAACTGAACTaGCTGAGATGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLEQLQLN*LRCLHL
Trigger: GAGGTGGAGGCATCTCAGTCAGTTCAGTTGGAGTTG...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAAAGCAAGGCTTCCTGCTaGTCTCTACTTCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKSKASC*SLLQIH
Trigger: ATGGATCTGAAGTAGAGATCAGCAGGAAGCCTTGCT...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTGTGCCAAAGATCTCTaGCATGCCAGTCAACAACTC +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWCAKDL*HASQQL
Trigger: GAGTTGTTGACTGGCATGGCAGAGATCTTTGGCACA...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTGTCTGGGATGGTGGGTaGCCCAACTTTGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPIVWDGG*PNFVDF
Trigger: AAAATCTACAAAGTTGGGGCACCCACCATCCCAGAC...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GAACTTTCTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATTATCCTCTTGAGACATaGCCAAAGGTAAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: ELSTSPQFTGQVAPTVFYYPLET*PKVNRS
Trigger: ACTCCTGTTTACCTTTGGGCATGTCTCAAGAGGATA...ATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAGAAAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCTCTCTTCTGTGTAGCTaGTGTGCCTGCTTATCGGAG +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFSLLCS*CACLSE
Trigger: CTCCGATAAGCAGGCACAGCAGCTACACAGAAGAGA...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGAACAGGAGTCTGGGATaGTGGGTGCCCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLENRSLG*WVPQLC
Trigger: ACAAAGTTGGGGCACCCACCATCCCAGACTCCTGTT...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTAAACAGGAGTCTGGGATaGTGGGTGCCCCAACTTTGT +
Preference number: 4 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVNRSLG*WVPQLC
Trigger: ACAAAGTTGGGGCACCCACCATCCCAGACTCCTGTT...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR TCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCCCTCACACCTTTGGTTaGACACATCTGCTAAACGAG +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFPHTFG*THLLNE
Trigger: CTCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGG...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTCCTCACACCTTTGGTTaGACACATCTGCTAAACGAG +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGPHTFG*THLLNE
Trigger: CTCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGG...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTCAAAGATCTCTGCCATaGCAGTCAACAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPIQRSLP*QSTTPT
Trigger: AGTTGGAGTTGTTGACTGGCATGGCAGAGATCTTTG...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGCAAAGATCTCTGCCATaGCAGTCAACAACTCCAACT +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWQRSLP*QSTTPT
Trigger: AGTTGGAGTTGTTGACTGGCATGGCAGAGATCTTTG...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTGTGCCAAAGATCTCTaGCATGCCAGTCAACAACTC +
Preference number: 4 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGCAKDL*HASQQL
Trigger: GAGTTGTTGACTGGCATGGCAGAGATCTTTGGCACA...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGTGCACAGAACAGCCATaGCAAGTGAAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLECTEQP*QVKTAT
Trigger: GGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCA...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTATGCACAGAACAGCCATaGCAAGTGAAAACAGCCACC +
Preference number: 4 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVCTEQP*QVKTAT
Trigger: GGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCA...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR GCA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACATTTTCTGCCTTGTaGCCCAAAGCACAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: SRVLENSKWHLRWSKKPITFSAL*PKAQLL
Trigger: TAACAGCTGTGCTTTGGGGCACAAGGCAGAAAATGT...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CCA 90 bp GAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: ENSKWHLRWSKKPITVSWSLLVR*PQQSFI
Trigger: GATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT...CCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCCACCAGCATCAAAGGTaGATTTCTTGTTTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFHQHQR*ISCFGS
Trigger: TGACCCGAAACAAGAAATTCACCTTTGATGCTGGTG...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGGTCTGGGATGGTGGGTaGCCCAACTTTGTAGATTTT +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLEVWDGG*PNFVDF
Trigger: AAAATCTACAAAGTTGGGGCACCCACCATCCCAGAC...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR GCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAATATCCTCTTGAGACATaGCCAAAGGTAAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKYPLET*PKVNRS
Trigger: ACTCCTGTTTACCTTTGGGCATGTCTCAAGAGGATA...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCAGTTTACTGGTCAGGTaGCCCCAACAGTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFSLLVR*PQQSFI
Trigger: GATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR TCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGCACCAGCATCAAAGGTaGATTTCTTGTTTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLEHQHQR*ISCFGS
Trigger: TGACCCGAAACAAGAAATTCACCTTTGATGCTGGTG...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp CAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAATTAGAGAATTCAAAGTaGCATCTTAGGTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: QFSRVLENSKWHLRWSKKLENSK*HLRWSK
Trigger: CTTAGACCACCTAAGATGCCACTTTGAATTCTCTAA...TTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGTTCACCTCACACCTTTaGTTGAACACATCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLEFTSHL*LNTSAK
Trigger: TTTAGCAGATGTGTTCAACCAAAGGTGTGAGGTGAA...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CCA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGTTAGAGAATTCAAAGTaGCATCTTAGGTGGTCTAAG +
Preference number: 4 (lower is better)
Translates to: FPFGSRLEESGYHYLFLELENSK*HLRWSK
Trigger: CTTAGACCACCTAAGATGCCACTTTGAATTCTCTAA...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS GCA 90 bp GCCTGCTTATCGGAGCCAACAGGGGCCACCTCCCTTCTTATCCTCTaGCTCCAGCACCTTCAGCCACTCGGAGGCTGGCGCGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: ACLSEPTGATSLLIL*LQHLQPLGGWRVGR
Trigger: TCTGCCCACGCGCCAGCCTCCGAGTGGCTGAAGGTGCTGGAGGCAGAGGATAAGAAGGGAGGTGGCCCCTGTTGGCTCCGATAAGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CAA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGTCCCGCCGGAAGTCCTaGGAGCGCTCCACCACACCC +
Preference number: 5 (lower is better)
Translates to: SPSASRGGQMISMSQAARSRRKS*ERSTTP
Trigger: GGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGGA...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp TATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCATCCCGCCGGAAGTCCTaGGAGCGCTCCACCACACCC +
Preference number: 5 (lower is better)
Translates to: YLSPSASRGGQMISMSQASRRKS*ERSTTP
Trigger: GGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGGA...TGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS GCA 90 bp GCCCACATCCAGCTCCACATAAGTGGGACGGCGGCCCAAACGCACTaGGTAGTTGAGCAGAAGGCGACACACTGTAGACTTGCCCACATC +
Preference number: 5 (lower is better)
Translates to: AHIQLHISGTAAQTH*VVEQKATHCRLAHI
Trigger: GATGTGGGCAAGTCTACAGTGTGTCGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCTGGATGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS GCA 90 bp ATGATACACCAGAGGGGCCTGGATAGAGAAACCCTCTTCGACATCTaGAGGCCGCTCGATGTAGAGGGCCCCCATGGTACCAGGGATGGA +
Preference number: 5 (lower is better)
Translates to: MIHQRGLDRETLFDI*RPLDVEGPHGTRDG
Trigger: TCCATCCCTGGTACCATGGGGGCCCTCTACATCGAGCGGCCTGCAGATGTCGAAGAGGGTTTCTCTATCCAGGCCCCTCTGGTGTATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp TTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGAACTACAAGCGGTTCTaGCCCGGACCCACGCCGGAA +
Preference number: 5 (lower is better)
Translates to: LLVRWPQQSFISAHLPLGNYKRF*PGPTPE
Trigger: TTCCGGCGTGGGTCCGGGCAAGAACCGCTTGTAGTT...CCCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR CAA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SPSASRGGQMISMSQAARVKTAT*APASKV
Trigger: CACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCAC...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CCA 90 bp GACAGGTTCTCCTCTGTACCCTCGGCAGTGCTAACACTCAGTAGGTaGTGCACCATATCTCGCCCAGGAGTGACAGGTACTAGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: DRFSSVPSAVLTLSR*CTISRPGVTGTSLS
Trigger: GCTCAAGCTAGTACCTGTCACTCCTGGGCGAGATATGGTGCACCACCTACTGAGTGTTAGCACTGCCGAGGGTACAGAGGAGAACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CCA 90 bp TTATCCTCTGCCTCCAGCACCTTCAGCCACTCGGAGGCTGGCGCGTaGGCAGAAGGCAATCTTCCTCTATTCCTAATCAGAACCCAGCAA +
Preference number: 5 (lower is better)
Translates to: LSSASSTFSHSEAGA*AEGNLPLFLIRTQQ
Trigger: TTGCTGGGTTCTGATTAGGAATAGAGGAAGATTGCCTTCTGCCCACGCGCCAGCCTCCGAGTGGCTGAAGGTGCTGGAGGCAGAGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS CCA 90 bp TCCCTTCTTATCCTCTGCCTCCAGCACCTTCAGCCACTCGGAGGCTaGCGCGTGGGCAGAAGGCAATCTTCCTCTATTCCTAATCAGAAC +
Preference number: 5 (lower is better)
Translates to: SLLILCLQHLQPLGG*RVGRRQSSSIPNQN
Trigger: GTTCTGATTAGGAATAGAGGAAGATTGCCTTCTGCCCACGCGCCAGCCTCCGAGTGGCTGAAGGTGCTGGAGGCAGAGGATAAGAAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CAA 90 bp GTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGAACTACAAGCGGTTCTaGCCCGGACCCACGCCGGAA +
Preference number: 5 (lower is better)
Translates to: VHSLLVRWPQQSFISAHLNYKRF*PGPTPE
Trigger: TTCCGGCGTGGGTCCGGGCAAGAACCGCTTGTAGTT...CAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302731.4
ENST00000533682.2
CDS-3UTR CAA 90 bp AGCCCATCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGTTCTTCCTTTTCCGCTaGCCTCCGCATCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: SPSASRGGQMISMSQAARFFLFR*PPHLFQ
Trigger: TTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGAA...CCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp TTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGCGACACACTGTAGACTaGCCCACATCAGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: FTGQVAPTVFYLSPSASRRHTVD*PTSVGP
Trigger: GGGCCCCACTGATGTGGGCAAGTCTACAGTGTGTCG...CCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS TCA 90 bp TTCTTAGGCAGTGGGCGAGGGGCTGGAGACAGAACAGTAAACACCTaGTGCTCCAGGTCCACACTGGTCACCACAATGAAGCCAGCTACA +
Preference number: 5 (lower is better)
Translates to: FLGSGRGAGDRTVNT*CSRSTLVTTMKPAT
Trigger: TGTAGCTGGCTTCATTGTGGTGACCAGTGTGGACCTGGAGCATCAGGTGTTTACTGTTCTGTCTCCAGCCCCTCGCCCACTGCCTAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCGACACACTGTAGACTaGCCCACATCAGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: LLVHSLLVRWPQQSFISARHTVD*PTSVGP
Trigger: GGGCCCCACTGATGTGGGCAAGTCTACAGTGTGTCG...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTGTGCAGGTCAGTCATTaGCCCCGCAGCCAACAGGTT +
Preference number: 5 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASVQVSH*PRSQQV
Trigger: AACCTGTTGGCTGCGGGGCAAATGACTGACCTGCAC...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529430.1
CDS-3UTR CAA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCCAGAGTCACTGCTGTTaGTCCCTGCCCCTGGGAGAA +
Preference number: 5 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLQSHCC*SLPLGE
Trigger: TTCTCCCAGGGGCAGGGACAAACAGCAGTGACTCTG...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS TCA 90 bp CAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGGTGGCCAGATaGTCTCTATGTCCCAGGCAGCAAGGCTTCCTGCTGATCTCTACT +
Preference number: 5 (lower is better)
Translates to: QQSFISAHLPLGVAR*SLCPRQQGFLLIST
Trigger: AGTAGAGATCAGCAGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp TCTGCCTCTAGGGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTACCTCACACCTTTGGTaGAACACATCTGCTAAACGA +
Preference number: 5 (lower is better)
Translates to: SASRGGQMISMSQAARLPTSHLW*NTSAKR
Trigger: TCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGGT...AGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCCCTAGAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp AAGTCCTTGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTATTGTACAGTCGTTCTaGATCCAGAACAACAACGAC +
Preference number: 5 (lower is better)
Translates to: KSLERSTTPPDLGSSTVRIVQSF*IQNNND
Trigger: GTCGTTGTTGTTCTGGATCAAGAACGACTGTACAAT...ACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAAGGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS TCA 90 bp GGGTGGCCAGATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTGCTaGTCTCTACTTCAGATCCATGAACCGGATATCCATGATGAGAAG +
Preference number: 5 (lower is better)
Translates to: GWPDDLYVPGSKASC*SLLQIHEPDIHDEK
Trigger: CTTCTCATCATGGATATCCGGTTCATGGATCTGAAGTAGAGATCAGCAGGAAGCCTTGCTGCCTGGGACATAGAGATCATCTGGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CATTGTACAGTCGTTCTTGATCCAGAACAACAACGACATCCACCTCAAAAGCTGAACTACAAGCGGTTCTaGCCCGGACCCACGCCGGAA +
Preference number: 5 (lower is better)
Translates to: HCTVVLDPEQQRHPPQKLNYKRF*PGPTPE
Trigger: TTCCGGCGTGGGTCCGGGCAAGAACCGCTTGTAGTT...CAGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CAA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLVKTAT*APASKV
Trigger: CACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCAC...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTTTCTTCCTTTTCCGCTaGCCTCCGCATCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASFFLFR*PPHLFQ
Trigger: TTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGAA...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp ACCACACCCCCAGATTTAGGGAGCAGCACAGTGCGTACAAAGTGGGGGAGGTCCGTTCACCTCACACCTTaGGTTGAACACATCTTATTA +
Preference number: 5 (lower is better)
Translates to: TTPPDLGSSTVRTKWGRSVHLTP*VEHILL
Trigger: TAATAAGATGTGTTCAACCAAAGGTGTGAGGTGAAC...GGACCTCCCCCACTTTGTACGCACTGTGCTGCTCCCTAAATCTGGGGGTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS GCA 90 bp GCCCTTGACCCAGCCACAGGTGTTAATGACACAGCCACTCACAGATaGCCTTCGGTTCACCTCACACCTTTGGTTGAACACATCTTATTA +
Preference number: 5 (lower is better)
Translates to: ALDPATGVNDTATHR*PSVHLTPLVEHILL
Trigger: TAATAAGATGTGTTCAACCAAAGGTGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGTGTCATTAACACCTGTGGCTGGGTCAAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CAA 90 bp CTTGATCCAGAACAACAACGACATCCACCTCAAAAGCTGAGGCTGCATGCACCATTCTTCCTTTTCCGCTaGCCTCCGCATCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LDPEQQRHPPQKLRLHAPFFLFR*PPHLFQ
Trigger: TTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGAA...TGGTGCATGCAGCCTCAGCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CAA 90 bp TTCATTGTACAGTCGTTCTTGATCCAGAACAACAACGACATCCACCTCAAAAGCCGACACACTGTAGACTaGCCCACATCAGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: FIVQSFLIQNNNDIHLKSRHTVD*PTSVGP
Trigger: GGGCCCCACTGATGTGGGCAAGTCTACAGTGTGTCG...GCTTTTGAGGTGGATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CAA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGTCCCGCCGGAAGTCCTaGGAGCGCTCCACCACACCC +
Preference number: 5 (lower is better)
Translates to: FPFGSRLEESGYHYLFLESRRKS*ERSTTP
Trigger: GGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGGA...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTATCCCGCCGGAAGTCCTaGGAGCGCTCCACCACACCC +
Preference number: 5 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVSRRKS*ERSTTP
Trigger: GGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGGA...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR CAA 90 bp AGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGAAACATTTTCTGCCTaGTGCCCCAAAGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: SLLVRWPQQSFISAHLPLETFSA*CPKAQL
Trigger: CAGCTGTGCTTTGGGGCACAAGGCAGAAAATGTTTC...TAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS GCA 90 bp ATTACTTCATCTTCAGTCACCCACAGAGTCACTGCTGTTTGTCCCTaGCCCTGGGAGAAGGTAGAAAGAAACATTTTCTGCCTTGTGCCC +
Preference number: 5 (lower is better)
Translates to: ITSSSVTHRVTAVCP*PWEKVERNIFCLVP
Trigger: GGGCACAAGGCAGAAAATGTTTCTTTCTACCTTCTCCCAGGGGCAGGGACAAACAGCAGTGACTCTGTGGGTGACTGAAGATGAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CAA 90 bp TTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTAGGGTTAGTGGTTGGCTTCTaGTCATCATTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: LLVRWPQQSFISAHLPLGLVVGF*SSLASS
Trigger: AGAAGAGGCTAATGATGACAAGAAGCCAACCACTAA...CCCTAGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTACCTCACACCTTTGGTaGAACACATCTGCTAAACGA +
Preference number: 5 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASTSHLW*NTSAKR
Trigger: TCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGGT...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp ACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTTAGTGGTTGGCTTCTaGTCATCATTAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TVYWSGGPNSLLSQPICLLVVGF*SSLASS
Trigger: AGAAGAGGCTAATGATGACAAGAAGCCAACCACTAA...GAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp GGTCCCGTTTCAGTTCATTGTACAGTCGTTCTTGATCCAGAACAACAACGACATGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GPVSVHCTVVLDPEQQRHVKTAT*APASKV
Trigger: CACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCAC...ATGTCGTTGTTGTTCTGGATCAAGAACGACTGTACAATGAACTGAAACGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529773.2
CDS-3UTR CAA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTCGACACACTGTAGACTaGCCCACATCAGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGRHTVD*PTSVGP
Trigger: GGGCCCCACTGATGTGGGCAAGTCTACAGTGTGTCG...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CTACTAGTCCACAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCACCTCACACCTTTGGTaGAACACATCTGCTAAACGA +
Preference number: 5 (lower is better)
Translates to: LLVHSLLVRWPQQSFISATSHLW*NTSAKR
Trigger: TCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGGT...GGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTGTGGACTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS GCA 90 bp TCAGAACCCAGCAATTACTTCATCTTCAGTCACCCACAGAGTCACTaGTGTTTGTCCCTGCCCCTGGGAGAAGGTAGAAAGAAACATTTT +
Preference number: 5 (lower is better)
Translates to: SEPSNYFIFSHPQSH*CLSLPLGEGRKKHF
Trigger: AAAATGTTTCTTTCTACCTTCTCCCAGGGGCAGGGACAAACAGCAGTGACTCTGTGGGTGACTGAAGATGAAGTAATTGCTGGGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS-3UTR CAA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTACGACACACTGTAGACTaGCCCACATCAGTGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVRHTVD*PTSVGP
Trigger: GGGCCCCACTGATGTGGGCAAGTCTACAGTGTGTCG...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS-3UTR CAA 90 bp CAGTTTACTGGTCAGGTGGCCCCAACAGTCTTTTATCTCAGCCCATCTGCCTCTTTCACATCTGAAAATTaGACATTGAAGGCATGGGGA +
Preference number: 5 (lower is better)
Translates to: QFTGQVAPTVFYLSPSASFTSEN*TLKAWG
Trigger: TCCCCATGCCTTCAATGTCAAATTTTCAGATGTGAA...AGAGGCAGATGGGCTGAGATAAAAGACTGTTGGGGCCACCTGACCAGTAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFVKTAT*APASKV
Trigger: CACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCAC...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp TCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTTTCTTCCTTTTCCGCTaGCCTCCGCATCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: SRVLENSKWHLRWSKKPIFFLFR*PPHLFQ
Trigger: TTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGAA...AATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp TTTCCTTTTGGTTCAAGATTAGAAGAGTCAGGTTACCACTACCTGTTTTTAGAGGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: FPFGSRLEESGYHYLFLEVKTAT*APASKV
Trigger: CACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCAC...CTCTAAAAACAGGTAGTGGTAACCTGACTCTTCTAATCTTGAACCAAAAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTCTTCCTTTTCCGCTaGCCTCCGCATCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGFFLFR*PPHLFQ
Trigger: TTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGAA...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCACCTCACACCTTTGGTaGAACACATCTGCTAAACGA +
Preference number: 5 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFTSHLW*NTSAKR
Trigger: TCGTTTAGCAGATGTGTTCAACCAAAGGTGTGAGGT...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGATTGTACAGTCGTTCTaGATCCAGAACAACAACGAC +
Preference number: 5 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWIVQSF*IQNNND
Trigger: GTCGTTGTTGTTCTGGATCAAGAACGACTGTACAAT...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp AGAATTCAAAGTGGCATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTATTGTACAGTCGTTCTaGATCCAGAACAACAACGAC +
Preference number: 5 (lower is better)
Translates to: RIQSGILGGLRNQLQSHGIVQSF*IQNNND
Trigger: GTCGTTGTTGTTCTGGATCAAGAACGACTGTACAAT...ACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATGCCACTTTGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp AAAGAAATGCAATTCTCCAGGGTCTTAGAGAATTCAAAGTGGCATCTTAGGTGGTTCACATCTGAAAATTaGACATTGAAGGCATGGGGA +
Preference number: 5 (lower is better)
Translates to: KEMQFSRVLENSKWHLRWFTSEN*TLKAWG
Trigger: TCCCCATGCCTTCAATGTCAAATTTTCAGATGTGAA...CCACCTAAGATGCCACTTTGAATTCTCTAAGACCCTGGAGAATTGCATTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp CATCTTAGGTGGTCTAAGAAACCAATTACAGTCTCATGGTTTTCCTTTTGGTTCTTCACATCTGAAAATTaGACATTGAAGGCATGGGGA +
Preference number: 5 (lower is better)
Translates to: HLRWSKKPITVSWFSFWFFTSEN*TLKAWG
Trigger: TCCCCATGCCTTCAATGTCAAATTTTCAGATGTGAA...GAACCAAAAGGAAAACCATGAGACTGTAATTGGTTTCTTAGACCACCTAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS-3UTR CAA 90 bp ACTTTATTGGAAGGAGTCCCTCTAATTCACACTTTCATCCTAGATAAATGGGTATTCACATCTGAAAATTaGACATTGAAGGCATGGGGA +
Preference number: 5 (lower is better)
Translates to: TLLEGVPLIHTFILDKWVFTSEN*TLKAWG
Trigger: TCCCCATGCCTTCAATGTCAAATTTTCAGATGTGAA...TACCCATTTATCTAGGATGAAAGTGTGAATTAGAGGGACTCCTTCCAATAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
CDS CCA 72 bp GCCGCTCGATGTAGAGGGCCCCCATGGTACCAGGGATaGACACAGAACCCTGGCCCACATCCAGCTCCACAT +
Preference number: 6 (lower is better)
Translates to: AARCRGPPWYQG*TQNPGPHPAPH
Trigger: ATGTGGAGCTGGATGTGGGCCAGGGTTCTGTGTCCATCCCTGGTACCATGGGGGCCCTCTACATCGAGCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS GCA 72 bp CAGAGGGGCCTGGATAGAGAAACCCTCTTCGACATCTaGAGGCCGCTCGATGTAGAGGGCCCCCATGGTACC +
Preference number: 6 (lower is better)
Translates to: QRGLDRETLFDI*RPLDVEGPHGT
Trigger: GGTACCATGGGGGCCCTCTACATCGAGCGGCCTGCAGATGTCGAAGAGGGTTTCTCTATCCAGGCCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS CAA 72 bp CGGATACGCTCATCCCTACATTCCCGCCGGAAGTCCTaGGAGCGCTCCACCACACCCCCAGATTTAGGGAGC +
Preference number: 6 (lower is better)
Translates to: RIRSSLHSRRKS*ERSTTPPDLGS
Trigger: GCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGGAATGTAGGGATGAGCGTATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CCA 72 bp ATCCTCTGCCTCCAGCACCTTCAGCCACTCGGAGGCTaGCGCGTGGGCAGAAGGCAATCTTCCTCTATTCCT +
Preference number: 6 (lower is better)
Translates to: ILCLQHLQPLGG*RVGRRQSSSIP
Trigger: AGGAATAGAGGAAGATTGCCTTCTGCCCACGCGCCAGCCTCCGAGTGGCTGAAGGTGCTGGAGGCAGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS CCA 72 bp GCCTCCAGCACCTTCAGCCACTCGGAGGCTGGCGCGTaGGCAGAAGGCAATCTTCCTCTATTCCTAATCAGA +
Preference number: 6 (lower is better)
Translates to: ASSTFSHSEAGA*AEGNLPLFLIR
Trigger: TCTGATTAGGAATAGAGGAAGATTGCCTTCTGCCCACGCGCCAGCCTCCGAGTGGCTGAAGGTGCTGGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS CAA 90 bp AGGAGTGTCCTTGGAGACATAAGCCACCTCAGTGCGGCCGCTCAGTaGCACAGAACAGCCATGCCAAGTGAAAACAGCCACCTTGGCACC +
Preference number: 6 (lower is better)
Translates to: RSVLGDISHLSAAAQ*HRTAMPSENSHLGT
Trigger: GGTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCACTGAGGTGGCTTATGTCTCCAAGGACACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS CAA 90 bp AAATACTCACGGATACGCTCATCCCTACATTCCCGCCGGAAGTCCTaGGAGCGCTCCACCACACCCCCAGATTTAGGGAGCAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: KYSRIRSSLHSRRKS*ERSTTPPDLGSSTV
Trigger: CACTGTGCTGCTCCCTAAATCTGGGGGTGTGGTGGAGCGCTCCAAGGACTTCCGGCGGGAATGTAGGGATGAGCGTATCCGTGAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS GCA 72 bp ACCTCAGTGCGGCCGCTCAGTTGCACAGAACAGCCATaGCAAGTGAAAACAGCCACCTTGGCACCAGCATCA +
Preference number: 6 (lower is better)
Translates to: TSVRPLSCTEQP*QVKTATLAPAS
Trigger: TGATGCTGGTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCACTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS GCA 72 bp CAGCTCCACATAAGTGGGACGGCGGCCCAAACGCACTaGGTAGTTGAGCAGAAGGCGACACACTGTAGACTT +
Preference number: 6 (lower is better)
Translates to: QLHISGTAAQTH*VVEQKATHCRL
Trigger: AAGTCTACAGTGTGTCGCCTTCTGCTCAACTACGCAGTGCGTTTGGGCCGCCGTCCCACTTATGTGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS TCA 72 bp AGTGGGCGAGGGGCTGGAGACAGAACAGTAAACACCTaGTGCTCCAGGTCCACACTGGTCACCACAATGAAG +
Preference number: 6 (lower is better)
Translates to: SGRGAGDRTVNT*CSRSTLVTTMK
Trigger: CTTCATTGTGGTGACCAGTGTGGACCTGGAGCATCAGGTGTTTACTGTTCTGTCTCCAGCCCCTCGCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS GCA 72 bp TCTGTACCCTCGGCAGTGCTAACACTCAGTAGGTGGTaGACCATATCTCGCCCAGGAGTGACAGGTACTAGC +
Preference number: 6 (lower is better)
Translates to: SVPSAVLTLSRW*TISRPGVTGTS
Trigger: GCTAGTACCTGTCACTCCTGGGCGAGATATGGTGCACCACCTACTGAGTGTTAGCACTGCCGAGGGTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CCA 72 bp TCCTCTGTACCCTCGGCAGTGCTAACACTCAGTAGGTaGTGCACCATATCTCGCCCAGGAGTGACAGGTACT +
Preference number: 6 (lower is better)
Translates to: SSVPSAVLTLSR*CTISRPGVTGT
Trigger: AGTACCTGTCACTCCTGGGCGAGATATGGTGCACCACCTACTGAGTGTTAGCACTGCCGAGGGTACAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CAA 72 bp CTTGGAGACATAAGCCACCTCAGTGCGGCCGCTCAGTaGCACAGAACAGCCATGCCAAGTGAAAACAGCCAC +
Preference number: 6 (lower is better)
Translates to: LGDISHLSAAAQ*HRTAMPSENSH
Trigger: GTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGGCCGCACTGAGGTGGCTTATGTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS CAA 72 bp CATCACTCGGGGACCTCGCTCTTCTTCCTTTTCCGCTaGCCTCCGCATCTGTTCCAAGGCTGTGTGAGTGTT +
Preference number: 6 (lower is better)
Translates to: HHSGTSLFFLFR*PPHLFQGCVSV
Trigger: AACACTCACACAGCCTTGGAACAGATGCGGAGGCAAGCGGAAAAGGAAGAAGAGCGAGGTCCCCGAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS CCA 72 bp GATGAGAAGGAAGTTCTTAGGCAGTGGGCGAGGGGCTaGAGACAGAACAGTAAACACCTGATGCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: DEKEVLRQWARG*RQNSKHLMLQV
Trigger: GACCTGGAGCATCAGGTGTTTACTGTTCTGTCTCCAGCCCCTCGCCCACTGCCTAAGAACTTCCTTCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS GCA 72 bp CCAGCCACAGGTGTTAATGACACAGCCACTCACAGATaGCCTTCGGTTCACCTCACACCTTTGGTTGAACAC +
Preference number: 6 (lower is better)
Translates to: PATGVNDTATHR*PSVHLTPLVEH
Trigger: GTGTTCAACCAAAGGTGTGAGGTGAACCGAAGGGCATCTGTGAGTGGCTGTGTCATTAACACCTGTGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS CAA 90 bp CCGCTCAGTTGCACAGAACAGCCATGCCAAGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTGAATTTCTTGTTTCGGGTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: PLSCTEQPCQVKTAT*APASKVNFLFRVSS
Trigger: AGAGCTGACCCGAAACAAGAAATTCACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCAACTGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS TCA 72 bp AGCTTGATGTTAGTGCCAGGAGTGGTGGAACCAAAATaGTACACCAGAGGGGCCTGGATAGAGAAACCCTCT +
Preference number: 6 (lower is better)
Translates to: SLMLVPGVVEPK*YTRGAWIEKPS
Trigger: AGAGGGTTTCTCTATCCAGGCCCCTCTGGTGTATCATTTTGGTTCCACCACTCCTGGCACTAACATCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000681650.1
CDS GCA 72 bp TGTTTCGGGTCAGCTCTGTGCCAAAGATCTCTGCCATaGCAGTCAACAACTCCAACTGAACTGACTGAGATG +
Preference number: 6 (lower is better)
Translates to: CFGSALCQRSLP*QSTTPTELTEM
Trigger: CATCTCAGTCAGTTCAGTTGGAGTTGTTGACTGGCATGGCAGAGATCTTTGGCACAGAGCTGACCCGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS GCA 72 bp AGCAATTACTTCATCTTCAGTCACCCACAGAGTCACTaGTGTTTGTCCCTGCCCCTGGGAGAAGGTAGAAAG +
Preference number: 6 (lower is better)
Translates to: SNYFIFSHPQSH*CLSLPLGEGRK
Trigger: CTTTCTACCTTCTCCCAGGGGCAGGGACAAACAGCAGTGACTCTGTGGGTGACTGAAGATGAAGTAATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS CAA 90 bp CCCAGCAATTACTTCATCTTCAGTCACCCACAGAGTCACTGCTGTTaGTCCCTGCCCCTGGGAGAAGGTAGAAAGAAACATTTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: PSNYFIFSHPQSHCC*SLPLGEGRKKHFLP
Trigger: AGGCAGAAAATGTTTCTTTCTACCTTCTCCCAGGGGCAGGGACAAACAGCAGTGACTCTGTGGGTGACTGAAGATGAAGTAATTGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS TCA 72 bp GATGATCTCTATGTCCCAGGCAGCAAGGCTTCCTGCTaGTCTCTACTTCAGATCCATGAACCGGATATCCAT +
Preference number: 6 (lower is better)
Translates to: DDLYVPGSKASC*SLLQIHEPDIH
Trigger: ATGGATATCCGGTTCATGGATCTGAAGTAGAGATCAGCAGGAAGCCTTGCTGCCTGGGACATAGAGATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302731.4
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CCA 72 bp CTTGAGACATGCCCAAAGGTAAACAGGAGTCTGGGATaGTGGGTGCCCCAACTTTGTAGATTTTCACATCTG +
Preference number: 6 (lower is better)
Translates to: LETCPKVNRSLG*WVPQLCRFSHL
Trigger: CAGATGTGAAAATCTACAAAGTTGGGGCACCCACCATCCCAGACTCCTGTTTACCTTTGGGCATGTCTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CAA 72 bp TGCACAGAACAGCCATGCCAAGTGAAAACAGCCACCTaGGCACCAGCATCAAAGGTGAATTTCTTGTTTCGG +
Preference number: 6 (lower is better)
Translates to: CTEQPCQVKTAT*APASKVNFLFR
Trigger: CCGAAACAAGAAATTCACCTTTGATGCTGGTGCCAAGGTGGCTGTTTTCACTTGGCATGGCTGTTCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1
CDS CAA 72 bp TACTTCATCTTCAGTCACCCACAGAGTCACTGCTGTTaGTCCCTGCCCCTGGGAGAAGGTAGAAAGAAACAT +
Preference number: 6 (lower is better)
Translates to: YFIFSHPQSHCC*SLPLGEGRKKH
Trigger: ATGTTTCTTTCTACCTTCTCCCAGGGGCAGGGACAAACAGCAGTGACTCTGTGGGTGACTGAAGATGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681650.1
CDS CCA 72 bp GAGACATGCCCAAAGGTAAACAGGAGTCTGGGATGGTaGGTGCCCCAACTTTGTAGATTTTCACATCTGAAA +
Preference number: 6 (lower is better)
Translates to: ETCPKVNRSLGW*VPQLCRFSHLK
Trigger: TTTCAGATGTGAAAATCTACAAAGTTGGGGCACCCACCATCCCAGACTCCTGTTTACCTTTGGGCATGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000533682.2
ENST00000681650.1
CDS CAA 72 bp GTTTCTCGCTCTAGTTCAAATTTAGTGGTTGGCTTCTaGTCATCATTAGCCTCTTCTCCCATCTCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: VSRSSSNLVVGF*SSLASSPISSV
Trigger: CACAGAAGAGATGGGAGAAGAGGCTAATGATGACAAGAAGCCAACCACTAAATTTGAACTAGAGCGAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000302731.4
ENST00000525602.1
ENST00000529430.1
ENST00000529773.2
ENST00000533682.2
ENST00000533905.1
ENST00000681650.1