RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLOCK (Homo sapiens)

Ensembl gene IDs: ENSG00000134852

Ensembl transcript IDs: ENST00000309964.8, ENST00000381322.5, ENST00000435527.6, ENST00000479384.1, ENST00000506747.5, ENST00000506923.5, ENST00000509151.5, ENST00000511124.1, ENST00000513033.1, ENST00000513440.6

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAAGGCTTCCTGAACAAGGGTTCTTCTCCCTTCAACAGTGCTCTTaGTGGAGCTGGACTGCTTCAGTGCTCCTAGCGTCAAGCAGACTG +
Preference number: 1 (lower is better)
Translates to: LRLPEQGFFSLQQCS*WSWTASVLLASSRL
Trigger: CAGTCTGCTTGACGCTAGGAGCACTGAAGCAGTCCAGCTCCATCAAGAGCACTGTTGAAGGGAGAAGAACCCTTGTTCAGGAAGCCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR TCA 90 bp AATATCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATaGTCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTAGCACT +
Preference number: 1 (lower is better)
Translates to: NIQAPKTLSELAMPL*SPPAGWYLMYICST
Trigger: AGTGCTACAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR TCA 90 bp GACTGCTTCAGTGCTCCTAGCGTCAAGCAGACTGCTTTAAGGCAATaGCCAACAACTACAGCACTTCTGAAGACCAAACATTTTCACTAT +
Preference number: 1 (lower is better)
Translates to: DCFSAPSVKQTALRQ*PTTTALLKTKHFHY
Trigger: ATAGTGAAAATGTTTGGTCTTCAGAAGTGCTGTAGTTGTTGGTCATTGCCTTAAAGCAGTCTGCTTGACGCTAGGAGCACTGAAGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 90 bp TTTAAGAGAATCAGGAGGAAAACAAAGCAGCAAAGAGGCAGCTGGTaGTTACTACCTCTTCCACTACTACGCTTCAGACTGACAGAAAAG +
Preference number: 1 (lower is better)
Translates to: FKRIRRKTKQQRGSW*LLPLPLLRFRLTEK
Trigger: CTTTTCTGTCAGTCTGAAGCGTAGTAGTGGAAGAGGTAGTAAGCACCAGCTGCCTCTTTGCTGCTTTGTTTTCCTCCTGATTCTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR CCA 90 bp CCCCTTCCAACAGGGACTCCTGTGGGACTAAGGGCCACAGGTAATTaGAAAGGTTATAGACTTGAATGCGTTTTACACAAATATTCATCA +
Preference number: 1 (lower is better)
Translates to: PLPTGTPVGLRATGN*KGYRLECVLHKYSS
Trigger: TGATGAATATTTGTGTAAAACGCATTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCTTAGTCCCACAGGAGTCCCTGTTGGAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 90 bp AGTAGATTCAGACTGTCCGTAAAGATTATCATGAGAGTTGGTGACTaGACCCCAAATCAGAGCCAGTTCCCTAAGAAGAATATGGTGCAA +
Preference number: 1 (lower is better)
Translates to: SRFRLSVKIIMRVGD*TPNQSQFPKKNMVQ
Trigger: TTGCACCATATTCTTCTTAGGGAACTGGCTCTGATTTGGGGTGCAGTCACCAACTCTCATGATAATCTTTACGGACAGTCTGAATCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 90 bp ACCTCTTCCACTACTACGCTTCAGACTGACAGAAAAGCAGCTAGCTaGTCCTTTAAATTAGCAATGGTTAATTCTAAGCAGGAAAAGATG +
Preference number: 1 (lower is better)
Translates to: TSSTTTLQTDRKAAS*SFKLAMVNSKQEKM
Trigger: CATCTTTTCCTGCTTAGAATTAACCATTGCTAATTTAAAGGAGCAGCTAGCTGCTTTTCTGTCAGTCTGAAGCGTAGTAGTGGAAGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR TCA 90 bp CAACTCAGATATATATGGAATGGCATAAGGTCAAGAAAGGCAATTTaGAAGGGGAGAAGAACAATGCTATTGCCATATTCCACAACATCC +
Preference number: 1 (lower is better)
Translates to: QLRYIWNGIRSRKAI*KGRRTMLLPYSTTS
Trigger: GGATGTTGTGGAATATGGCAATAGCATTGTTCTTCTCCCCTTTCAAATTGCCTTTCTTGACCTTATGCCATTCCATATATATCTGAGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 90 bp GTGGGACTAAGGGCCACAGGTAATTGGAAAGGTTATAGACTTGAATaGGTTTTACACAAATATTCATCAACAAACTTTCAATTACCAAAG +
Preference number: 1 (lower is better)
Translates to: VGLRATGNWKGYRLE*VLHKYSSTNFQLPK
Trigger: CTTTGGTAATTGAAAGTTTGTTGATGAATATTTGTGTAAAACGCATTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCTTAGTCCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGATGATCACCTCCTGCTaGCTGGTATTTAATGTACAT +
Preference number: 2 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLMITSC*LVFNVH
Trigger: ATGTACATTAAATACCAGCCAGCAGGAGGTGATCAT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAGGCAGCATTTTCTCTaGCAACTAATTCCAGGAACT +
Preference number: 2 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWRQHFL*QLIPGT
Trigger: AGTTCCTGGAATTAGTTGGCAGAGAAAATGCTGCCT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAAACACTGTCAGAACTaGCTATGCCCCTATGATCAC +
Preference number: 2 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVKHCQN*LCPYDH
Trigger: GTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCTGGCTATGCCCCTATaGTCACCTCCTGCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCLAMPL*SPPAGW
Trigger: CCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACATGAGAGTTGGTGACTaGACCCCAAATCAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ITIASSELALVQANSKTHMRVGD*TPNQSQ
Trigger: CTGGCTCTGATTTGGGGTGCAGTCACCAACTCTCAT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAAGCAAACCCCTGACATaGCAGTGGTATGTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPSKPLT*QWYVLC
Trigger: ACAGAGGACATACCACTGCCATGTCAGGGGTTTGCT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACGCTATACCTAGCCTGTaGGACTCCATAGCTTCTCTG +
Preference number: 2 (lower is better)
Translates to: ITIASSELALVQANSKTHAIPSL*DSIASL
Trigger: CAGAGAAGCTATGGAGTCCCACAGGCTAGGTATAGC...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCATTACCCATGCGGATaGGGCTATACTAGTGCTATG +
Preference number: 2 (lower is better)
Translates to: ITIASSELALVQANSKTHHYPCG*GYTSAM
Trigger: CATAGCACTAGTATAGCCTCATCCGCATGGGTAATG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGGCAGCATTTTCTCTaGCAACTAATTCCAGGAACT +
Preference number: 2 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMARQHFL*QLIPGT
Trigger: AGTTCCTGGAATTAGTTGGCAGAGAAAATGCTGCCT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR CCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATCACCTCCTGCTGGCTaGTATTTAATGTACATCTGT +
Preference number: 2 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMASPPAG*YLMYIC
Trigger: ACAGATGTACATTAAATACCAGCCAGCAGGAGGTGA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAATGATCACCTCCTGCTaGCTGGTATTTAATGTACAT +
Preference number: 2 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVMITSC*LVFNVH
Trigger: ATGTACATTAAATACCAGCCAGCAGGAGGTGATCAT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR CCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACCCCTGACATGGCAGTaGTATGTCCTCTGTAACACT +
Preference number: 2 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAPLTWQ*YVLCNT
Trigger: AGTGTTACAGAGGACATACCACTGCCATGTCAGGGG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATTTCCTCAGGTCATCTaGGTAACTCTTAATGGGCCA +
Preference number: 2 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQFPQVI*VTLNGP
Trigger: TGGCCCATTAAGAGTTACTCAGATGACCTGAGGAAA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACAATACTGCATCTCATaGAACTGCTGGAACTTTCCC +
Preference number: 2 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQQYCIS*NCWNFP
Trigger: GGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACAATACTGCATCTCATaGAACTGCTGGAACTTTCCC +
Preference number: 2 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPQYCIS*NCWNFP
Trigger: GGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGGCTTAGCATTCCCCTaGCCTCTTTACCTAGCAATT +
Preference number: 2 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAGLAFP*PLYLAI
Trigger: AATTGCTAGGTAAAGAGGTCAGGGGAATGCTAAGCC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGAGATGGGAAATAATTaGAGGGGCTGGAGTAGGACA +
Preference number: 2 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAEMGNN*RGWSRT
Trigger: TGTCCTACTCCAGCCCCTTCAATTATTTCCCATCTC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCATTTCCTCAGGTCATCTaGGTAACTCTTAATGGGCCA +
Preference number: 2 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAFPQVI*VTLNGP
Trigger: TGGCCCATTAAGAGTTACTCAGATGACCTGAGGAAA...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACAGGATGGATCAGTTTaGACATGGTGTCAGAATTTC +
Preference number: 2 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPQDGSV*TWCQNF
Trigger: GAAATTCTGACACCATGTGCAAACTGATCCATCCTG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGTCTCGGTTCTGGTTTaGCACCACTCTAAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCVSVLV*HHSKEQ
Trigger: TTGCTCCTTAGAGTGGTGTCAAACCAGAACCGAGAC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAATGCTGAAATGACATaGCAACATTTCAGGGCACAT +
Preference number: 2 (lower is better)
Translates to: ITIASSELALVQANSKTHNAEMT*QHFRAH
Trigger: ATGTGCCCTGAAATGTTGGCATGTCATTTCAGCATT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAGGGCCACAGGTAATTaGAAAGGTTATAGACTTGAA +
Preference number: 2 (lower is better)
Translates to: ITIASSELALVQANSKTHRATGN*KGYRLE
Trigger: TTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTTCATTTGGCTATCTTaGAATCACTCCCATAAACCA +
Preference number: 2 (lower is better)
Translates to: ITIASSELALVQANSKTHFIWLS*NHSHKP
Trigger: TGGTTTATGGGAGTGATTTCAAGATAGCCAAATGAA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGGCATCATGTGCCATTaGTTCTGTCATACTGGCCTT +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCGIMCH*FCHTGL
Trigger: AAGGCCAGTATGACAGAACCAATGGCACATGATGCC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTCATTAGTGCCTTTCTaGTTCCCTGGAGGTCATTTC +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCSLVPF*FPGGHF
Trigger: GAAATGACCTCCAGGGAATCAGAAAGGCACTAATGA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTCATTAGTGCCTTTCTaGTTCCCTGGAGGTCATTTC +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLSLVPF*FPGGHF
Trigger: GAAATGACCTCCAGGGAATCAGAAAGGCACTAATGA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCTAAGCAGGAAAAGATaGGCTGCGAAGAACAGTAAG +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLLSRKR*AAKNSK
Trigger: CTTACTGTTCTTCGCAGCTCATCTTTTCCTGCTTAG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCTAAGCAGGAAAAGATaGGCTGCGAAGAACAGTAAG +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCLSRKR*AAKNSK
Trigger: CTTACTGTTCTTCGCAGCTCATCTTTTCCTGCTTAG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCATTCCAGTATGGTCTaGATGGTAACTGTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCHSSMV*MVTVLA
Trigger: AGCCAGAACAGTTACCATTCAGACCATACTGGAATG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCTGGGGCTTGTCTTATaGTTTGTTGCTGTCAACCTA +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLLGLVL*FVAVNL
Trigger: TAGGTTGACAGCAACAAAGCATAAGACAAGCCCCAG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAAGAAAAGCAGCTAGCTaGTCCTTTAAATTAGCAATG +
Preference number: 2 (lower is better)
Translates to: LPFKNSNQLVLARKTHSARKAAS*SFKLAM
Trigger: CATTGCTAATTTAAAGGAGCAGCTAGCTGCTTTTCT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACAGATATATATGGAATaGCATAAGGTCAAGAAAGGC +
Preference number: 2 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAQIYME*HKVKKG
Trigger: GCCTTTCTTGACCTTATGCCATTCCATATATATCTG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCACATCATACCTCACTaGACAAACTGTGACATCACA +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLHIIPH*TNCDIT
Trigger: TGTGATGTCACAGTTTGTTCAGTGAGGTATGATGTG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCCTATGATCACCTCCTaGTGGCTGGTATTTAATGTA +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLPMITS*WLVFNV
Trigger: TACATTAAATACCAGCCAGCAGGAGGTGATCATAGG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTGCTTTACTGGGCAGTaGTGTGTATGGAAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCCFTGQ*CVWKFC
Trigger: ACAAAACTTCCATACACAGCACTGCCCAGTAAAGCA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR CAA 90 bp ACAACTCAGATATATATGGAATGGCATAAGGTCAAGAAAGGCAATTaGAAAGGGGAGAAGAACAATGCTATTGCCATATTCCACAACATC +
Preference number: 2 (lower is better)
Translates to: TTQIYMEWHKVKKGN*KGEKNNAIAIFHNI
Trigger: GATGTTGTGGAATATGGCAATAGCATTGTTCTTCTCCCCTTTCAAATTGCCTTTCTTGACCTTATGCCATTCCATATATATCTGAGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATATGATCACCTCCTGCTaGCTGGTATTTAATGTACAT +
Preference number: 2 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHMITSC*LVFNVH
Trigger: ATGTACATTAAATACCAGCCAGCAGGAGGTGATCAT...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGGATCAGTTTGCACATaGTGTCAGAATTTCAGGAAA +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLGSVCT*CQNFRK
Trigger: TTTCCTGAAATTCTGACACCATGTGCAAACTGATCC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTCCCCCGACTATTTGTaGAGATGGGAAATAATTGAA +
Preference number: 2 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLSPDYL*RWEIIE
Trigger: TTCAATTATTTCCCATCTCCACAAATAGTCGGGGGA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAAGGTTGGAACTGTATaGATCAGATTTGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCKVGTV*IRFERS
Trigger: ACTCCTTTCAAATCTGATTCATACAGTTCCAACCTT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR CAA 90 bp AACCAAGAACCAAGCAGTAAGGACAGCAATGTCAAGAATATCACATaGAGAACCACACAGAACATTATAAAGAATTTGGTGCATGTTTTA +
Preference number: 2 (lower is better)
Translates to: NQEPSSKDSNVKNIT*RTTQNIIKNLVHVL
Trigger: TAAAACATGCACCAAATTCTTTATAATGTTCTGTGTGGTTCTCAATGTGATATTCTTGACATTGCTGTCCTTACTGCTTGGTTCTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR GCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTGTTTTAAAAGTGTGTaGTATTCCTTCCGTAAAGGA +
Preference number: 2 (lower is better)
Translates to: IREPNIAPLKPFIILHVCCFKSV*YSFRKG
Trigger: TCCTTTACGGAAGGAATAGCACACACTTTTAAAACA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR TCA 72 bp CCTGAACAAGGGTTCTTCTCCCTTCAACAGTGCTCTTaGTGGAGCTGGACTGCTTCAGTGCTCCTAGCGTCA +
Preference number: 3 (lower is better)
Translates to: PEQGFFSLQQCS*WSWTASVLLAS
Trigger: TGACGCTAGGAGCACTGAAGCAGTCCAGCTCCATCAAGAGCACTGTTGAAGGGAGAAGAACCCTTGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp CTTCTCCCTTCAACAGTGCTCTTGATGGAGCTGGACTaGTTCAGTGCTCCTAGCGTCAAGCAGACTGCTTTA +
Preference number: 3 (lower is better)
Translates to: LLPSTVLLMELD*FSAPSVKQTAL
Trigger: TAAAGCAGTCTGCTTGACGCTAGGAGCACTGAAGCAGTCCAGCTCCATCAAGAGCACTGTTGAAGGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR TCA 72 bp GTGTGTGCTATTCCTTCCGTAAAGGATCCCCAGGCATaGGAGTTGGGTCTTCTCACCTGTCTCATAAAGCAG +
Preference number: 3 (lower is better)
Translates to: VCAIPSVKDPQA*ELGLLTCLIKQ
Trigger: CTGCTTTATGAGACAGGTGAGAAGACCCAACTCTCATGCCTGGGGATCCTTTACGGAAGGAATAGCACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR CCA 72 bp AGGAGAGCACAGCACTGTCAAGTTACCCCCGGAATTTaGGATGCTCGAAGGCTAGACCGTAGTATTTACTCA +
Preference number: 3 (lower is better)
Translates to: RRAQHCQVTPGI*DARRLDRSIYS
Trigger: TGAGTAAATACTACGGTCTAGCCTTCGAGCATCCCAAATTCCGGGGGTAACTTGACAGTGCTGTGCTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp ATCAGGAGGAAAACAAAGCAGCAAAGAGGCAGCTGGTaGTTACTACCTCTTCCACTACTACGCTTCAGACTG +
Preference number: 3 (lower is better)
Translates to: IRRKTKQQRGSW*LLPLPLLRFRL
Trigger: CAGTCTGAAGCGTAGTAGTGGAAGAGGTAGTAAGCACCAGCTGCCTCTTTGCTGCTTTGTTTTCCTCCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACATCCCCTTCCTCCCTaGATGTCAAGAGAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPHPLPP*MSREEA
Trigger: TGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAGTTACCCCCGGAATTaGGGATGCTCGAAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: ITIASSELALVQANSKTHSYPRN*GCSKAR
Trigger: TCTAGCCTTCGAGCATCCCAAATTCCGGGGGTAACT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAGGCATCATGTGCCATaGGTTCTGTCATACTGGCCT +
Preference number: 3 (lower is better)
Translates to: ITIASSELALVQANSKTHRHHVP*VLSYWP
Trigger: AGGCCAGTATGACAGAACCAATGGCACATGATGCCT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR TCA 72 bp GCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATaGTCACCTCCTGCTGGCTGGTATTTAATGTACATC +
Preference number: 3 (lower is better)
Translates to: APKTLSELAMPL*SPPAGWYLMYI
Trigger: GATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR TCA 72 bp GGCATCATGTGCCATTGGTTCTGTCATACTGGCCTTTaGCTGTGTTGGGGAAGTAATCACACAAAAAGTGCC +
Preference number: 3 (lower is better)
Translates to: GIMCHWFCHTGL*LCWGSNHTKSA
Trigger: GGCACTTTTTGTGTGATTACTTCCCCAACACAGTCAAAGGCCAGTATGACAGAACCAATGGCACATGATGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTCCACAACATCCCCCTaGTCTGTGTACATATGCTCA +
Preference number: 3 (lower is better)
Translates to: ITIASSELALVQANSKTHSTTSP*SVYICS
Trigger: TGAGCATATGTACACAGACAAGGGGGATGTTGTGGA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGGGGGCGGGATAGCTTaGCAACCCAAATTTAAGAGA +
Preference number: 3 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAGGGIA*QPKFKR
Trigger: TCTCTTAAATTTGGGTTGCAAAGCTATCCCGCCCCC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR CCA 72 bp ACAGGGACTCCTGTGGGACTAAGGGCCACAGGTAATTaGAAAGGTTATAGACTTGAATGCGTTTTACACAAA +
Preference number: 3 (lower is better)
Translates to: TGTPVGLRATGN*KGYRLECVLHK
Trigger: TTTGTGTAAAACGCATTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCTTAGTCCCACAGGAGTCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATCATCCCCTTCCTCCCTaGATGTCAAGAGAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHHPLPP*MSREEA
Trigger: TGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATG...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
3UTR-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCATCCCCTTCCTCCCTaGATGTCAAGAGAGGAAGCA +
Preference number: 3 (lower is better)
Translates to: IREPNIAPLKPFIILHVCHPLPP*MSREEA
Trigger: TGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACACAGGATGGATCAGTTaGCACATGGTGTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: ITIASSELALVQANSKTHTGWIS*HMVSEF
Trigger: AAATTCTGACACCATGTGCAAACTGATCCATCCTGT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp GAAAGGCAATTTGAAAGGGGAGAAGAACAATGCTATTaGCATATTCCACAACATCCCCCTTGTCTGTGTACA +
Preference number: 3 (lower is better)
Translates to: ERQFERGEEQCY*HIPQHPPCLCT
Trigger: TGTACACAGACAAGGGGGATGTTGTGGAATATGGCAATAGCATTGTTCTTCTCCCCTTTCAAATTGCCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp CGAAGGCTAGACCGTAGTATTTACTCACATGCTACCTaGATCTCCCATACTTTTCTCCAATATTTTCCATTC +
Preference number: 3 (lower is better)
Translates to: RRLDRSIYSHAT*ISHTFLQYFPF
Trigger: GAATGGAAAATATTGGAGAAAAGTATGGGAGATGCAGGTAGCATGTGAGTAAATACTACGGTCTAGCCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp GATCCTCAAATGTCTAGGTTTCCAATATTCCAACACTaGTTTACTGGGCAGTGCTGTGTATGGAAGTTTTGT +
Preference number: 3 (lower is better)
Translates to: DPQMSRFPIFQH*FTGQCCVWKFC
Trigger: ACAAAACTTCCATACACAGCACTGCCCAGTAAAGCAGTGTTGGAATATTGGAAACCTAGACATTTGAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCTGTGTATGGAAGTTTaGTTTTGTTTTCAAAGGACC +
Preference number: 3 (lower is better)
Translates to: ITIASSELALVQANSKTHLCMEV*FCFQRT
Trigger: GGTCCTTTGAAAACAAAACAAAACTTCCATACACAG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp ACTACTACGCTTCAGACTGACAGAAAAGCAGCTAGCTaGTCCTTTAAATTAGCAATGGTTAATTCTAAGCAG +
Preference number: 3 (lower is better)
Translates to: TTTLQTDRKAAS*SFKLAMVNSKQ
Trigger: CTGCTTAGAATTAACCATTGCTAATTTAAAGGAGCAGCTAGCTGCTTTTCTGTCAGTCTGAAGCGTAGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGACAGGATGGATCAGTTaGCACATGGTGTCAGAATTT +
Preference number: 3 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLTGWIS*HMVSEF
Trigger: AAATTCTGACACCATGTGCAAACTGATCCATCCTGT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTTTGATTTATTACACTaGTCCTCTCCTCCCTTTCCT +
Preference number: 3 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLFDLLH*SSPPFP
Trigger: AGGAAAGGGAGGAGAGGACAAGTGTAATAAATCAAA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
3UTR GCA 72 bp AGGGCCACAGGTAATTGGAAAGGTTATAGACTTGAATaGGTTTTACACAAATATTCATCAACAAACTTTCAA +
Preference number: 3 (lower is better)
Translates to: RATGNWKGYRLE*VLHKYSSTNFQ
Trigger: TTGAAAGTTTGTTGATGAATATTTGTGTAAAACGCATTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGATGGAATCTGGACCATaGTTCCGGCTGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLMESGP*FRLQAE
Trigger: CTCAGCCTGCAGCCGGAAGCATGGTCCAGATTCCAT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCAGTCCTGTGCCGGCTaGGTTGCTGCTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWQSCAG*VAAVAE
Trigger: CTCAGCAACAGCAGCAACTCAGCCGGCACAGGACTG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCTGGCTATGCCCCTATaGTCACCTCCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWLAMPL*SPPAGW
Trigger: CCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAAAACGCCAGCGGCGGTaGCGGGGAACGGGAAGCGCG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQKRQRR*RGTGSA
Trigger: CGCGCTTCCCGTTCCCCGTCACCGCCGCTGGCGTTT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR TCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACGCAAGCCGAGTCCGTaGTTGCGCCCCCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSARKPSP*LRPLPA
Trigger: CGCCGGGAGGGGGCGCAATCACGGACTCGGCTTGCG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGCTGCCTGGGTGGAGTaGTCGTATCCGTCGGGATCT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWAAWVE*SYPSGS
Trigger: AGATCCCGACGGATACGAGCACTCCACCCAGGCAGC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGGACCATGCTTCCGGCTaGAGGCTGAGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLDHASG*RLRNHH
Trigger: ATGGTGATTTCTCAGCCTGCAGCCGGAAGCATGGTC...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCTCTGCTGCTGCTGCTaGTGCGTTACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLLCCCC*CVTDNV
Trigger: GACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTGCTCCTGGGAGCTCTaGTGCTGCTGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCCSWEL*CCCCCV
Trigger: AACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGGCACGTGTGCTACTGTaGTTGAACCTTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLARVLL*LNLGRV
Trigger: GACCCTTCCAAGGTTCAACCACAGTAGCACACGTGC...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAAGTGCAGGGGCATCTaGAGTTGGCCCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCKCRGI*SWPLHC
Trigger: GCAGTGGAGGGGCCAACTCCAGATGCCCCTGCACTT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAGAGTGCTCTGTGTCTaGCTGGGTAGAGATGTTTGC +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLRVLCV*LGRDVC
Trigger: GCAAACATCTCTACCCAGTCAGACACAGAGCACTCT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCTTCCGGCTGCAGGCTaGGAAATCACCATAGTGTTA +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLLPAAG*EITIVL
Trigger: TAACACTATGGTGATTTCTCAGCCTGCAGCCGGAAG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGTTGCTGAACTGAAGTaGGCTGCTGCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLVAELK*AAAPGS
Trigger: GCTCCCAGGAGCAGCAGCTCACTTCAGTTCAGCAAC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTTGCTGAACTGAAGTaGGCTGCTGCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVAELK*AAAPGS
Trigger: GCTCCCAGGAGCAGCAGCTCACTTCAGTTCAGCAAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGGATAGAATCAGCTTCTaGGCTCCAGCAGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLDRISF*APAALQ
Trigger: CTGCAAAGCTGCTGGAGCTCAGAAGCTGATTCTATC...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTGGGAGCTCTGCTGCTaGTGCTGCTGCGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCWELCC*CCCVTD
Trigger: GTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGACTGAAGTGAGCTGCTaGTCCTGGGAGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLTEVSC*SWELCC
Trigger: GCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCCCCTGACATGGCAGTaGTATGTCCTCTGTAACACT +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLPLTWQ*YVLCNT
Trigger: AGTGTTACAGAGGACATACCACTGCCATGTCAGGGG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCAGCAAAGAGGCAGCTaGTGCTTACTACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLQQRGS*CLLPLP
Trigger: TGGAAGAGGTAGTAAGCACCAGCTGCCTCTTTGCTG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAACGGGAAGCGCGGGTaGACGGAAGAAGAGAAACCG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWNGKRG*TEEEKP
Trigger: CGGTTTCTCTTCTTCCGTCCACCCGCGCTTCCCGTT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR TCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGTCTGAGACGGCCGTGTaGGATGATTTTCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLSETAV*DDFLEL
Trigger: GAGTTCAAGAAAATCATCTCACACGGCCGTCTCAGA...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACAGTCCTGTGCCGGCTaGGTTGCTGCTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAQSCAG*VAAVAE
Trigger: CTCAGCAACAGCAGCAACTCAGCCGGCACAGGACTG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAGCCAAATCCACTGTTaGCCCTTAGTCAGGAACCTA +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLSQIHC*PLVRNL
Trigger: TAGGTTCCTGACTAAGGGGCAACAGTGGATTTGGCT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAACTGAAGTGAGCTGCTaGTCCTGGGAGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVTEVSC*SWELCC
Trigger: GCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAAGCTGTCAGTCCTGTaGCGGCTGAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCKLSVL*RLSCCC
Trigger: ACAGCAGCAACTCAGCCGGCACAGGACTGACAGCTT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAAGCCGAGTCCGTGATTaGGCCCCCTCCCGGCGCATG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSASRVRD*APSRRM
Trigger: CATGCGCCGGGAGGGGGCGCAATCACGGACTCGGCT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCTGGTAAATGCTGCCTaGGTGGAGTGCTCGTATCCG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWLVNAA*VECSYP
Trigger: CGGATACGAGCACTCCACCCAGGCAGCATTTACCAG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCTGGTAAATGCTGCCTaGGTGGAGTGCTCGTATCCG +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCLVNAA*VECSYP
Trigger: CGGATACGAGCACTCCACCCAGGCAGCATTTACCAG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAGATGGTTGCTGAACTaGAGTGAGCTGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWRWLLN*SELLLL
Trigger: CAGGAGCAGCAGCTCACTTCAGTTCAGCAACCATCT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLSECSY*STLGAV
Trigger: AACAGCACCCAGAGTGCTGCAGTAACTACATTCACT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATGGGAGCTCTGCTGCTaGTGCTGCTGCGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAWELCC*CCCVTD
Trigger: GTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTGGGAGCTCTGCTGCTaGTGCTGCTGCGTTACTGAC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLWELCC*CCCVTD
Trigger: GTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGTTGATGGAGCTGGACTaGTTCAGTGCTCCTAGCGTC +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLLMELD*FSAPSV
Trigger: GACGCTAGGAGCACTGAAGCAGTCCAGCTCCATCAA...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACTGGTAAATGCTGCCTaGGTGGAGTGCTCGTATCCG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVLVNAA*VECSYP
Trigger: CGGATACGAGCACTCCACCCAGGCAGCATTTACCAG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCATAGTGTTATACAGTaGGGCTGTAAGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLHSVIQ*GCKSAL
Trigger: CAGAGCACTCTTACAGCCCCACTGTATAACACTATG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCTGGGTGCTGTTTTGTaGCATACTAGATGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLLGAVL*HTRWNL
Trigger: CAGATTCCATCTAGTATGCCACAAAACAGCACCCAG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGACTGTGGTTGAACCTTaGAAGGGTCGGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWTVVEP*KGRASC
Trigger: ACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCCCAGGCATGAGAGTTaGGTCTTCTCACCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWPRHES*VFSPVS
Trigger: TGAGACAGGTGAGAAGACCCAACTCTCATGCCTGGG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCCCAGGCATGAGAGTTaGGTCTTCTCACCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCPRHES*VFSPVS
Trigger: TGAGACAGGTGAGAAGACCCAACTCTCATGCCTGGG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGATTTCCTTGATGAACTaGGGTGTAGCTAACCTGACA +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLISLMN*GVANLT
Trigger: TGTCAGGTTAGCTACACCTCAGTTCATCAAGGAAAT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGAAGGGGTTGGGCTGTaGTCAAACCTTTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLEGVGL*SNLSNA
Trigger: AGCATTGGAAAGGTTTGATCACAGCCCAACCCCTTC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGTGCACCATCTTCTCATaGGCTGGTAAATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLCTIFS*AGKCCL
Trigger: CAGGCAGCATTTACCAGCTCATGAGAAGATGGTGCA...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCTTCCGGCTGCAGGCTaGGAAATCACCATAGTGTTA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCLPAAG*EITIVL
Trigger: TAACACTATGGTGATTTCTCAGCCTGCAGCCGGAAG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACAGTCCTGTGCCGGCTaGGTTGCTGCTGTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPQSCAG*VAAVAE
Trigger: CTCAGCAACAGCAGCAACTCAGCCGGCACAGGACTG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCTGGCTATGCCCCTATaGTCACCTCCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHLAMPL*SPPAGW
Trigger: CCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGAAGGATCCCCAGGCATaGGAGTTGGGTCTTCTCACC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLKDPQA*ELGLLT
Trigger: GGTGAGAAGACCCAACTCTCATGCCTGGGGATCCTT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAACCATTGCCAGCAGTaGACTTGCACTAGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCNHCQQ*TCTSPS
Trigger: GCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGCTGCCTGGGTGGAGTaGTCGTATCCGTCGGGATCT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSAAWVE*SYPSGS
Trigger: AGATCCCGACGGATACGAGCACTCCACCCAGGCAGC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGATGGAATCTGGACCATaGTTCCGGCTGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLMESGP*FRLQAE
Trigger: CTCAGCCTGCAGCCGGAAGCATGGTCCAGATTCCAT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATGCTCCTGGGAGCTCTaGTGCTGCTGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQCSWEL*CCCCCV
Trigger: AACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATGCTCCTGGGAGCTCTaGTGCTGCTGCTGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPCSWEL*CCCCCV
Trigger: AACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGATCTACTCACACGGATaGAATTTTCCTAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLIYSHG*NFPRPL
Trigger: CAGAGGTCTAGGAAAATTGCATCCGTGTGAGTAGAT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGATGAGAGTTGGTGACTaGACCCCAAATCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWMRVGD*TPNQSQ
Trigger: CTGGCTCTGATTTGGGGTGCAGTCACCAACTCTCAT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAAAGTGCAGGGGCATCTaGAGTTGGCCCCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPKCRGI*SWPLHC
Trigger: GCAGTGGAGGGGCCAACTCCAGATGCCCCTGCACTT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGAAGGGGTTGGGCTGTaGTCAAACCTTTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVEGVGL*SNLSNA
Trigger: AGCATTGGAAAGGTTTGATCACAGCCCAACCCCTTC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGTTGCTGAACTGAAGTaGGCTGCTGCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPVAELK*AAAPGS
Trigger: GCTCCCAGGAGCAGCAGCTCACTTCAGTTCAGCAAC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGATGGTTGCTGAACTaGAGTGAGCTGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMARWLLN*SELLLL
Trigger: CAGGAGCAGCAGCTCACTTCAGTTCAGCAACCATCT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGCAGAGAGAATGAGTTaGGTTGAGGGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVAERMS*VEGFPW
Trigger: CCATGGGAATCCCTCAACTCAACTCATTCTCTCTGC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGTGTGCTACTGTGGTTaGACCTTGGAAGGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQVCYCG*TLEGSG
Trigger: GCCCGACCCTTCCAAGGTTCAACCACAGTAGCACAC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACGTGTGCTACTGTGGTTaGACCTTGGAAGGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHVCYCG*TLEGSG
Trigger: GCCCGACCCTTCCAAGGTTCAACCACAGTAGCACAC...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGGCTTAGCATTCCCCTaGCCTCTTTACCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLGLAFP*PLYLAI
Trigger: AATTGCTAGGTAAAGAGGTCAGGGGAATGCTAAGCC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACTTCAACAGTGCTCTTaGTGGAGCTGGACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVLQQCS*WSWTAS
Trigger: TGAAGCAGTCCAGCTCCATCAAGAGCACTGTTGAAG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCATTACCCATGCGGATaGGGCTATACTAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLHYPCG*GYTSAM
Trigger: CATAGCACTAGTATAGCCTCATCCGCATGGGTAATG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAAGGACCAAGTAACTTaGCACCATATTAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLKDQVT*HHIKDS
Trigger: GCTGTCTTTAATATGGTGTCAAGTTACTTGGTCCTT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGTTCAGCCCTAACTTCTaGATAACTTACTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLFSPNF*ITYYSV
Trigger: CACACTGTAGTAAGTTATGCAGAAGTTAGGGCTGAA...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGATCAAACCTTTCCAATaGTTCCTTGAGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLIKPFQ*FLETDC
Trigger: ACAGTCAGTCTCAAGGAAGCATTGGAAAGGTTTGAT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGCTGCCTGGGTGGAGTaGTCGTATCCGTCGGGATCT +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAAAWVE*SYPSGS
Trigger: AGATCCCGACGGATACGAGCACTCCACCCAGGCAGC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGACCATGCTTCCGGCTaGAGGCTGAGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLDHASG*RLRNHH
Trigger: ATGGTGATTTCTCAGCCTGCAGCCGGAAGCATGGTC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGAGCAAAAGTAGGATATaGAGTCACCACCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLSKSRI*SHHLAH
Trigger: ATGGGCCAGGTGGTGACTGCATATCCTACTTTTGCT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATCCTGGGAGCTCTGCTaGTGCTGCTGCTGCGTTACT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQSWELC*CCCCVT
Trigger: AGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACACTGAAGTGAGCTGCTaGTCCTGGGAGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHTEVSC*SWELCC
Trigger: GCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTGACTGAGGGAAGGTaGTCTGTTGTAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVTEGR*SVVEEM
Trigger: CATTTCCTCTACAACAGAGCACCTTCCCTCAGTCAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCAAAGAGGCAGCTGGTaGTTACTACCTCTTCCACTA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWQRGSW*LLPLPL
Trigger: TAGTGGAAGAGGTAGTAAGCACCAGCTGCCTCTTTG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAATGCTGAAATGACATaGCAACATTTCAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLNAEMT*QHFRAH
Trigger: ATGTGCCCTGAAATGTTGGCATGTCATTTCAGCATT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCTTTCAGATGTTGCATaGCTCCTAATTGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLLSDVA*LLIELK
Trigger: TTTCAGCTCAATTAGGAGCCATGCAACATCTGAAAG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTGCTCTGTGTCTGACTaGGTAGAGATGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCCSVSD*VEMFAD
Trigger: GTCAGCAAACATCTCTACCCAGTCAGACACAGAGCA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGTTGAGGGATTCCCATaGAGCAACCTAGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCVEGFP*SNLEVC
Trigger: ACAGACTTCTAGGTTGCTCCATGGGAATCCCTCAAC...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTTGAGGGATTCCCATaGAGCAACCTAGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVEGFP*SNLEVC
Trigger: ACAGACTTCTAGGTTGCTCCATGGGAATCCCTCAAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGCACGTGTGCTACTGTaGTTGAACCTTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLARVLL*LNLGRV
Trigger: GACCCTTCCAAGGTTCAACCACAGTAGCACACGTGC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGTTACCCCCGGAATTTaGGATGCTCGAAGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLVTPGI*DARRLD
Trigger: GTCTAGCCTTCGAGCATCCCAAATTCCGGGGGTAAC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCCAATCAGCTTGTCCTaGCTAGAAAGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLPISLS*LERLTQ
Trigger: CTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAATGGGTGGTGCCCTGTaGTCTAGAAACAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVMGGAL*SRNRNF
Trigger: GAAGTTTCTGTTTCTAGATCACAGGGCACCACCCAT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGGTAGAGATGTTTGCTaGCTGTGCCCACTCAGTACA +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAGRDVC*LCPLST
Trigger: TGTACTGAGTGGGCACAGTCAGCAAACATCTCTACC...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGAGTGCTCTGTGTCTaGCTGGGTAGAGATGTTTGC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMARVLCV*LGRDVC
Trigger: GCAAACATCTCTACCCAGTCAGACACAGAGCACTCT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGAGAGTGCTCTGTGTCTaGCTGGGTAGAGATGTTTGC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLRVLCV*LGRDVC
Trigger: GCAAACATCTCTACCCAGTCAGACACAGAGCACTCT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGCAGAGAGAATGAGTTaGGTTGAGGGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLAERMS*VEGFPW
Trigger: CCATGGGAATCCCTCAACTCAACTCATTCTCTCTGC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTCATTAGTGCCTTTCTaGTTCCCTGGAGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSLVPF*FPGGHF
Trigger: GAAATGACCTCCAGGGAATCAGAAAGGCACTAATGA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTACGGAAACCGGACAATaGCTTCAAGATGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCTETGQ*LQDGEL
Trigger: TAACTCACCATCTTGAAGTCATTGTCCGGTTTCCGT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGGCTTAGCATTCCCCTaGCCTCTTTACCTAGCAATT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVGLAFP*PLYLAI
Trigger: AATTGCTAGGTAAAGAGGTCAGGGGAATGCTAAGCC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCTAAGCAGGAAAAGATaGGCTGCGAAGAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWLSRKR*AAKNSK
Trigger: CTTACTGTTCTTCGCAGCTCATCTTTTCCTGCTTAG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCATGGAATCTGGACCATaGTTCCGGCTGCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSMESGP*FRLQAE
Trigger: CTCAGCCTGCAGCCGGAAGCATGGTCCAGATTCCAT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLSECSY*STLGAV
Trigger: AACAGCACCCAGAGTGCTGCAGTAACTACATTCACT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAGCAAAAGTAGGATATaGAGTCACCACCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVSKSRI*SHHLAH
Trigger: ATGGGCCAGGTGGTGACTGCATATCCTACTTTTGCT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCATCCTGGGAGCTCTGCTaGTGCTGCTGCTGCGTTACT +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSASWELC*CCCCVT
Trigger: AGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGA...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAAGCTGTCAGTCCTGTaGCGGCTGAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHKLSVL*RLSCCC
Trigger: ACAGCAGCAACTCAGCCGGCACAGGACTGACAGCTT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCAAGCTGTCAGTCCTGTaGCGGCTGAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSKLSVL*RLSCCC
Trigger: ACAGCAGCAACTCAGCCGGCACAGGACTGACAGCTT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCCAATATTCCAACACTaGTTTACTGGGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLPIFQH*FTGQCC
Trigger: ACAGCACTGCCCAGTAAAGCAGTGTTGGAATATTGG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGGTAGATGGCTCCTTTaGGTCTATTGTTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLGRWLL*VYCSSQ
Trigger: CTGCGAGGAACAATAGACCCAAAGGAGCCATCTACC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGCAAATACCCTATTATaGGTGGTGCCCTGTGATCTA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCANTLL*VVPCDL
Trigger: TAGATCACAGGGCACCACCCATAATAGGGTATTTGC...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCTGGGTGCTGTTTTGTaGCATACTAGATGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWLGAVL*HTRWNL
Trigger: CAGATTCCATCTAGTATGCCACAAAACAGCACCCAG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCTGGGTGCTGTTTTGTaGCATACTAGATGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLLGAVL*HTRWNL
Trigger: CAGATTCCATCTAGTATGCCACAAAACAGCACCCAG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAGAAGTCTTAAGAACTaGCTTAGCATTCCCCTGACC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCRSLKN*LSIPLT
Trigger: GGTCAGGGGAATGCTAAGCCAGTTCTTAAGACTTCT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTATTGGTTCTGTCATACTaGCCTTTGACTGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVLVLSY*PLTVLG
Trigger: CCCCAACACAGTCAAAGGCCAGTATGACAGAACCAA...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGGCATCATGTGCCATTaGTTCTGTCATACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVGIMCH*FCHTGL
Trigger: AAGGCCAGTATGACAGAACCAATGGCACATGATGCC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGAGAATGAGTTGAGTTaGGGGATTCCCATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAENELS*GIPMEQ
Trigger: TTGCTCCATGGGAATCCCTCAACTCAACTCATTCTC...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTATTTCCTCAGGTCATCTaGGTAACTCTTAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVFPQVI*VTLNGP
Trigger: TGGCCCATTAAGAGTTACTCAGATGACCTGAGGAAA...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTCACTGAACAAACTGTaGCATCACAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSLNKL*HHSQSM
Trigger: CATACTTTGGCTGTGATGTCACAGTTTGTTCAGTGA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCACATCATACCTCACTaGACAAACTGTGACATCACA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCHIIPH*TNCDIT
Trigger: TGTGATGTCACAGTTTGTTCAGTGAGGTATGATGTG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACTAAGCAGGAAAAGATaGGCTGCGAAGAACAGTAAG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVLSRKR*AAKNSK
Trigger: CTTACTGTTCTTCGCAGCTCATCTTTTCCTGCTTAG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATATCATGAGAGTTGGTaGCTGCACCCCAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAYHESW*LHPKSE
Trigger: CTCTGATTTGGGGTGCAGTCACCAACTCTCATGATA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCAGGAAACCACAATCTaGTTTGATCTTTCATCTGCC +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLQETTI*FDLSSA
Trigger: GGCAGATGAAAGATCAAATCAGATTGTGGTTTCCTG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAACTAGGTACCATGACTaGCCCACAAGCTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQTRYHD*PTSYRS
Trigger: GCTCCTGTAGCTTGTGGGGCAGTCATGGTACCTAGT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGCAAAAGTAGGATATaGAGTCACCACCTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMASKSRI*SHHLAH
Trigger: ATGGGCCAGGTGGTGACTGCATATCCTACTTTTGCT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACTCTGCTGCTGCTGCTaGTGCGTTACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQLCCCC*CVTDNV
Trigger: GACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAGGCAGCATTTTCTCTaGCAACTAATTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCRQHFL*QLIPGT
Trigger: AGTTCCTGGAATTAGTTGGCAGAGAAAATGCTGCCT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCAGGATGGATCAGTTTaGACATGGTGTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLQDGSV*TWCQNF
Trigger: GAAATTCTGACACCATGTGCAAACTGATCCATCCTG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCTAAGGTTTCAAAACTaGTACGGAAACCGGACAATG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLLRFQN*YGNRTM
Trigger: CATTGTCCGGTTTCCGTAGCAGTTTTGAAACCTTAG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACTGGGGCTTGTCTTATaGTTTGTTGCTGTCAACCTA +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVLGLVL*FVAVNL
Trigger: TAGGTTGACAGCAACAAAGCATAAGACAAGCCCCAG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGATCTACTCACACGGATaGAATTTTCCTAGACCTCTG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWIYSHG*NFPRPL
Trigger: CAGAGGTCTAGGAAAATTGCATCCGTGTGAGTAGAT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTGCTTTACTGGGCAGTaGTGTGTATGGAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCCFTGQ*CVWKFC
Trigger: ACAAAACTTCCATACACAGCACTGCCCAGTAAAGCA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAAAGAATATAAACTCTaGGGCGCTGCGTGTAGGAAA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCKEYKL*GAACRK
Trigger: TTTCCTACACGCAGCGCCGCAGAGTTTATATTCTTT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR CCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGTCCGTTGTTCCAATTaGTCTTTCAGATGTTGCATG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLVRCSN*SFRCCM
Trigger: CATGCAACATCTGAAAGACCAATTGGAACAACGGAC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAACTGTGGTTGAACCTTaGAAGGGTCGGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQTVVEP*KGRASC
Trigger: ACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGCACGTGTGCTACTGTaGTTGAACCTTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPARVLL*LNLGRV
Trigger: GACCCTTCCAAGGTTCAACCACAGTAGCACACGTGC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTCACCTCCTGCTGGCTaGTATTTAATGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSPPAG*YLMYIC
Trigger: ACAGATGTACATTAAATACCAGCCAGCAGGAGGTGA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGTTACCCCCGGAATTTaGGATGCTCGAAGGCTAGAC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQVTPGI*DARRLD
Trigger: GTCTAGCCTTCGAGCATCCCAAATTCCGGGGGTAAC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAAAACTGCTACTGCTTaGCTCTTTTGCTATAAGTTT +
Preference number: 4 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLKTATA*LFCYKF
Trigger: AAACTTATAGCAAAAGAGCCAAGCAGTAGCAGTTTT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACGGTAGAGATGTTTGCTaGCTGTGCCCACTCAGTACA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHGRDVC*LCPLST
Trigger: TGTACTGAGTGGGCACAGTCAGCAAACATCTCTACC...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGGTAGAGATGTTTGCTaGCTGTGCCCACTCAGTACA +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPGRDVC*LCPLST
Trigger: TGTACTGAGTGGGCACAGTCAGCAAACATCTCTACC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCTTATCTGCCTGTCCTaGGTGAATGTAGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLLICLS*VNVVTA
Trigger: TGCAGTAACTACATTCACTCAGGACAGGCAGATAAG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCTGGCTATGCCCCTATaGTCACCTCCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLLAMPL*SPPAGW
Trigger: CCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTCAAGAAAGGCAATTTaGAAGGGGAGAAGAACAATG +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSRKAI*KGRRTM
Trigger: CATTGTTCTTCTCCCCTTTCAAATTGCCTTTCTTGA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGTCTCGGTTCTGGTTTaGCACCACTCTAAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSVSVLV*HHSKEQ
Trigger: TTGCTCCTTAGAGTGGTGTCAAACCAGAACCGAGAC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAACTGCTTTAAGGCAATaGCCAACAACTACAGCACTT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVTALRQ*PTTTAL
Trigger: AAGTGCTGTAGTTGTTGGTCATTGCCTTAAAGCAGT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACTTCAACAGTGCTCTTaGTGGAGCTGGACTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPLQQCS*WSWTAS
Trigger: TGAAGCAGTCCAGCTCCATCAAGAGCACTGTTGAAG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCCTCCACTGCCGTCCTaGAGTAAAGTAGATTCAGAC +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHPPLPS*SKVDSD
Trigger: GTCTGAATCTACTTTACTTCAGGACGGCAGTGGAGG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAAGGACCAAGTAACTTaGCACCATATTAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCKDQVT*HHIKDS
Trigger: GCTGTCTTTAATATGGTGTCAAGTTACTTGGTCCTT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACATTCCAGTATGGTCTaGATGGTAACTGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAHSSMV*MVTVLA
Trigger: AGCCAGAACAGTTACCATTCAGACCATACTGGAATG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGATAGAATCAGCTTCTaGGCTCCAGCAGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQDRISF*APAALQ
Trigger: CTGCAAAGCTGCTGGAGCTCAGAAGCTGATTCTATC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTTCAGCCCTAACTTCTaGATAACTTACTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCFSPNF*ITYYSV
Trigger: CACACTGTAGTAAGTTATGCAGAAGTTAGGGCTGAA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACCAGGATTTGATTGTTaGAAAAACATCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAPGFDC*KNICSP
Trigger: GGGGCTGCAGATGTTTTTGCAACAATCAAATCCTGG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCCAGGATTTGATTGTTaGAAAAACATCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLPGFDC*KNICSP
Trigger: GGGGCTGCAGATGTTTTTGCAACAATCAAATCCTGG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACTCTGCTGCTGCTGCTaGTGCGTTACTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSALCCCC*CVTDNV
Trigger: GACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGAAGAACAATGCTATTaGCATATTCCACAACATCCC +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLEEQCY*HIPQHP
Trigger: GGGATGTTGTGGAATATGGCAATAGCATTGTTCTTC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGAATCTTCATTTGAATaGTCAAGTTTCATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLESSFE*SSFMGQ
Trigger: CTGCCCCATGAAACTTGAGCATTCAAATGAAGATTC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACCAAAGCACGGTAACTaGAGAGTAGCTAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVPKHGN*RVASIF
Trigger: AAAAATGCTAGCTACTCTGCAGTTACCGTGCTTTGG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAATGAGAGTTGGTGACTaGACCCCAAATCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQMRVGD*TPNQSQ
Trigger: CTGGCTCTGATTTGGGGTGCAGTCACCAACTCTCAT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCCAATATTCCAACACTaGTTTACTGGGCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLPIFQH*FTGQCC
Trigger: ACAGCACTGCCCAGTAAAGCAGTGTTGGAATATTGG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCAATTGTGGTTGACGTaGTTTAACTACCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCQLWLT*FNYRSL
Trigger: TAGAGAACGGTAGTTAAAGCACGTCAACCACAATTG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGGTAGATGGCTCCTTTaGGTCTATTGTTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPGRWLL*VYCSSQ
Trigger: CTGCGAGGAACAATAGACCCAAAGGAGCCATCTACC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTCCCAGAACTTCAAATaGCAAATACCCTATTATGGG +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSQNFK*QIPYYG
Trigger: CCCATAATAGGGTATTTGCCATTTGAAGTTCTGGGA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTATCCGTCGGGATCTTaGTTGGTGTTGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHYPSGS*LVLRKG
Trigger: ACCCTTCCTCAACACCAACCAAGATCCCGACGGATA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATATCCGTCGGGATCTTaGTTGGTGTTGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQYPSGS*LVLRKG
Trigger: ACCCTTCCTCAACACCAACCAAGATCCCGACGGATA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATATCCGTCGGGATCTTaGTTGGTGTTGAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPYPSGS*LVLRKG
Trigger: ACCCTTCCTCAACACCAACCAAGATCCCGACGGATA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCTTTCAGATGTTGCATaGCTCCTAATTGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCLSDVA*LLIELK
Trigger: TTTCAGCTCAATTAGGAGCCATGCAACATCTGAAAG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTATGCAGTCACCACCTaGCCCATAAGCATAGTACTA +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLYAVTT*PISIVL
Trigger: TAGTACTATGCTTATGGGCCAGGTGGTGACTGCATA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAAACACTGTCAGAACTaGCTATGCCCCTATGATCAC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAKHCQN*LCPYDH
Trigger: GTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCCCCTGACATGGCAGTaGTATGTCCTCTGTAACACT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHPLTWQ*YVLCNT
Trigger: AGTGTTACAGAGGACATACCACTGCCATGTCAGGGG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAAGCAAACCCCTGACATaGCAGTGGTATGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQSKPLT*QWYVLC
Trigger: ACAGAGGACATACCACTGCCATGTCAGGGGTTTGCT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGGATCAGTTTGCACATaGTGTCAGAATTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWGSVCT*CQNFRK
Trigger: TTTCCTGAAATTCTGACACCATGTGCAAACTGATCC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGAAGTCTTAAGAACTaGCTTAGCATTCCCCTGACC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMARSLKN*LSIPLT
Trigger: GGTCAGGGGAATGCTAAGCCAGTTCTTAAGACTTCT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGACTATTTGTGGAGATaGGAAATAATTGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCDYLWR*EIIEGA
Trigger: AGCCCCTTCAATTATTTCCCATCTCCACAAATAGTC...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTCCCCCGACTATTTGTaGAGATGGGAAATAATTGAA +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSPDYL*RWEIIE
Trigger: TTCAATTATTTCCCATCTCCACAAATAGTCGGGGGA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCCAGCAAAGAGGCAGCTaGTGCTTACTACCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSQQRGS*CLLPLP
Trigger: TGGAAGAGGTAGTAAGCACCAGCTGCCTCTTTGCTG...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAGGGCCACAGGTAATTaGAAAGGTTATAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWRATGN*KGYRLE
Trigger: TTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTCCAAACACTTAAAATaGCAAGTGCCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWSKHLK*QVPLCC
Trigger: ACAGCACAAAGGCACTTGCCATTTTAAGTGTTTGGA...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGAATAAACAGGCTCATTaGTCTCTTTTGGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLNKQAH*SLLVST
Trigger: TGTGGACACCAAAAGAGACCAATGAGCCTGTTTATT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGCTATACCTAGCCTGTaGGACTCCATAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSAIPSL*DSIASL
Trigger: CAGAGAAGCTATGGAGTCCCACAGGCTAGGTATAGC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAAAACCCAGCTTCACTaGCGGAAAGAAATCTACAAA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWKTQLH*RKEIYK
Trigger: TTTGTAGATTTCTTTCCGCCAGTGAAGCTGGGTTTT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCATCTGACTGTGCAGTaGTTTCTTTATGTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWHLTVQ*FLYVFV
Trigger: TACGAAAACATAAAGAAATCACTGCACAGTCAGATG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAATTTCACTAGCATCTaGCTGTGCAGTGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWNFTSI*LCSDFF
Trigger: AAAGAAATCACTGCACAGTCAGATGCTAGTGAAATT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCATGGGTGGTGCCCTGTaGTCTAGAAACAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSMGGAL*SRNRNF
Trigger: GAAGTTTCTGTTTCTAGATCACAGGGCACCACCCAT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGTTTATACGATTATCTaGCCCAGAATCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCVYTII*PRILAF
Trigger: AAAAGCCAAGATTCTGGGTCAGATAATCGTATAAAC...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTCTGAGACGGCCGTGTaGGATGATTTTCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSSETAV*DDFLEL
Trigger: GAGTTCAAGAAAATCATCTCACACGGCCGTCTCAGA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCATGCACCATCTTCTCATaGGCTGGTAAATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSACTIFS*AGKCCL
Trigger: CAGGCAGCATTTACCAGCTCATGAGAAGATGGTGCA...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTGGGAATTTATGGACTaGCTACTAAATGATGACCTT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWWEFMD*LLNDDL
Trigger: AAGGTCATCATTTAGTAGTCAGTCCATAAATTCCCA...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTCTTCTTGTTGCCGATaGATATTTGCTTCTATCATG +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWSSCCR*IFASIM
Trigger: CATGATAGAAGCAAATATTCATCGGCAACAAGAAGA...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGTATTCATTCCACTTTaGATCTGGTTAGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLVFIPL*IWLVGT
Trigger: TGTTCCTACTAACCAGATTCAAAGTGGAATGAATAC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGAGAATGAGTTGAGTTaGGGGATTCCCATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQENELS*GIPMEQ
Trigger: TTGCTCCATGGGAATCCCTCAACTCAACTCATTCTC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGTGTGCTACTGTGGTTaGACCTTGGAAGGGTCGGGC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHVCYCG*TLEGSG
Trigger: GCCCGACCCTTCCAAGGTTCAACCACAGTAGCACAC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATGTGCCCCGGAAAAGTaGACAGAACACTACTGTGTT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQCAPEK*TEHYCV
Trigger: AACACAGTAGTGTTCTGTTCACTTTTCCGGGGCACA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGAGATGGGAAATAATTaGAGGGGCTGGAGTAGGACA +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSEMGNN*RGWSRT
Trigger: TGTCCTACTCCAGCCCCTTCAATTATTTCCCATCTC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGTTCATTTGGCTATCTTaGAATCACTCCCATAAACCA +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLFIWLS*NHSHKP
Trigger: TGGTTTATGGGAGTGATTTCAAGATAGCCAAATGAA...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTATCATGAGAGTTGGTaGCTGCACCCCAAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSYHESW*LHPKSE
Trigger: CTCTGATTTGGGGTGCAGTCACCAACTCTCATGATA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAAATTCTTTCTTAGATaGCTTGAGGAGGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVKFFLR*LEEGSA
Trigger: TGCACTTCCCTCCTCAAGTCATCTAAGAAAGAATTT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAAGGTTGGAACTGTATaGATCAGATTTGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWKVGTV*IRFERS
Trigger: ACTCCTTTCAAATCTGATTCATACAGTTCCAACCTT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGAAATTCAATTGTGGTTaGCGTGCTTTAACTACCGTT +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLKFNCG*RALTTV
Trigger: AACGGTAGTTAAAGCACGTCAACCACAATTGAATTT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGGAACAACTTGGCCTTaGATATTTATAGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVGTTWP*IFIGAS
Trigger: ACTTGCACCTATAAATATGCAAGGCCAAGTTGTTCC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTCCTGGGAGCTCTGCTaGTGCTGCTGCTGCGTTACT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLSWELC*CCCCVT
Trigger: AGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCCTATGATCACCTCCTaGTGGCTGGTATTTAATGTA +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLPMITS*WLVFNV
Trigger: TACATTAAATACCAGCCAGCAGGAGGTGATCATAGG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAGGGGAGAAGAACAATaGTATTGCCATATTCCACAA +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVRGEEQ*YCHIPQ
Trigger: TTGTGGAATATGGCAATAGCATTGTTCTTCTCCCCT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTATCCCAGAACTTCAAATaGCAAATACCCTATTATGGG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVSQNFK*QIPYYG
Trigger: CCCATAATAGGGTATTTGCCATTTGAAGTTCTGGGA...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATGCTCTGTGTCTGACTaGGTAGAGATGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPCSVSD*VEMFAD
Trigger: GTCAGCAAACATCTCTACCCAGTCAGACACAGAGCA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGTTGAGGGATTCCCATaGAGCAACCTAGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSVEGFP*SNLEVC
Trigger: ACAGACTTCTAGGTTGCTCCATGGGAATCCCTCAAC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTCACCTCCTGCTGGCTaGTATTTAATGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLSPPAG*YLMYIC
Trigger: ACAGATGTACATTAAATACCAGCCAGCAGGAGGTGA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCCCAATCAGCTTGTCCTaGCTAGAAAGACTCACTCAG +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSPISLS*LERLTQ
Trigger: CTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGG...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCCAACACTGCTTTACTaGGCAGTGCTGTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHPTLLY*AVLCME
Trigger: TTCCATACACAGCACTGCCCAGTAAAGCAGTGTTGG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGCTCAAAATGATGATTaGAGGTATCTAGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVAQNDD*RYLVRL
Trigger: AAGTCTCACTAGATACCTTCAATCATCATTTTGAGC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAATTCAACCCAGGATTTaGTTGTTGCAAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVIQPRI*LLQKHL
Trigger: CAGATGTTTTTGCAACAATCAAATCCTGGGTTGAAT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTATTTCCAGAAGAAAGTTaGACGGAACCAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVFPEES*TEPKFN
Trigger: GTTGAATTTTGGTTCCGTTCAACTTTCTTCTGGAAA...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGTATTCATTCCACTTTaGATCTGGTTAGTAGGAACA +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVVFIPL*IWLVGT
Trigger: TGTTCCTACTAACCAGATTCAAAGTGGAATGAATAC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACTTATCTGCCTGTCCTaGGTGAATGTAGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPLICLS*VNVVTA
Trigger: TGCAGTAACTACATTCACTCAGGACAGGCAGATAAG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCTTATCTGCCTGTCCTaGGTGAATGTAGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHLICLS*VNVVTA
Trigger: TGCAGTAACTACATTCACTCAGGACAGGCAGATAAG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATTTCCTCAGGTCATCTaGGTAACTCTTAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPFPQVI*VTLNGP
Trigger: TGGCCCATTAAGAGTTACTCAGATGACCTGAGGAAA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTTTCCTCAGGTCATCTaGGTAACTCTTAATGGGCCA +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSFPQVI*VTLNGP
Trigger: TGGCCCATTAAGAGTTACTCAGATGACCTGAGGAAA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATCATTAGTGCCTTTCTaGTTCCCTGGAGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQSLVPF*FPGGHF
Trigger: GAAATGACCTCCAGGGAATCAGAAAGGCACTAATGA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTCAAGAAAGGCAATTTaGAAGGGGAGAAGAACAATG +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLSRKAI*KGRRTM
Trigger: CATTGTTCTTCTCCCCTTTCAAATTGCCTTTCTTGA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACATTACCCATGCGGATaGGGCTATACTAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAHYPCG*GYTSAM
Trigger: CATAGCACTAGTATAGCCTCATCCGCATGGGTAATG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATAAGGATCCCCAGGCATaGGAGTTGGGTCTTCTCACC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHKDPQA*ELGLLT
Trigger: GGTGAGAAGACCCAACTCTCATGCCTGGGGATCCTT...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTATCTAGTGAGACTTaGCAAGTTCTAAAGATTCAT +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVSSET*QVLKIH
Trigger: ATGAATCTTTAGAACTTGGCAAGTCTCACTAGATAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAAGCCAAATCCACTGTTaGCCCTTAGTCAGGAACCTA +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSASQIHC*PLVRNL
Trigger: TAGGTTCCTGACTAAGGGGCAACAGTGGATTTGGCT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAACTGAAACTGGGACATaGCTTGTGGAATTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMATETGT*LVELVN
Trigger: ATTTACCAATTCCACAAGGCATGTCCCAGTTTCAGT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACCAGGATTTGATTGTTaGAAAAACATCTGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQPGFDC*KNICSP
Trigger: GGGGCTGCAGATGTTTTTGCAACAATCAAATCCTGG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSSECSY*STLGAV
Trigger: AACAGCACCCAGAGTGCTGCAGTAACTACATTCACT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGAAGAACAATGCTATTaGCATATTCCACAACATCCC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAEEQCY*HIPQHP
Trigger: GGGATGTTGTGGAATATGGCAATAGCATTGTTCTTC...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAGAAAAGCAGCTAGCTaGTCCTTTAAATTAGCAATG +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVRKAAS*SFKLAM
Trigger: CATTGCTAATTTAAAGGAGCAGCTAGCTGCTTTTCT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTACATTTACAAAAACTaGTACTGCTTGGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCYIYKN*YCLALL
Trigger: CAAAAGAGCCAAGCAGTAGCAGTTTTTGTAAATGTA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAACTAGGCTTTTATCTTaGAGAATTAGGCTCACCTAC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMATRLLS*RIRLTY
Trigger: GTAGGTGAGCCTAATTCTGCAAGATAAAAGCCTAGT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTATCTATCTTCATAAGATaGCCTATGTGTGCGTTGTAT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVSIFIR*PMCALY
Trigger: ATACAACGCACACATAGGCCATCTTATGAAGATAGA...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCTTTCAGATGTTGCATaGCTCCTAATTGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLLSDVA*LLIELK
Trigger: TTTCAGCTCAATTAGGAGCCATGCAACATCTGAAAG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGATAGGTGCAAGTTGCTaGATATTAGATGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWIGASC*ILDEFP
Trigger: TGGAAATTCATCTAATATCCAGCAACTTGCACCTAT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGATAGGTGCAAGTTGCTaGATATTAGATGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLIGASC*ILDEFP
Trigger: TGGAAATTCATCTAATATCCAGCAACTTGCACCTAT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCATAGTGTTATACAGTaGGGCTGTAAGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHHSVIQ*GCKSAL
Trigger: CAGAGCACTCTTACAGCCCCACTGTATAACACTATG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACATAGTGTTATACAGTaGGGCTGTAAGAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQHSVIQ*GCKSAL
Trigger: CAGAGCACTCTTACAGCCCCACTGTATAACACTATG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTATGCAGTCACCACCTaGCCCATAAGCATAGTACTA +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSYAVTT*PISIVL
Trigger: TAGTACTATGCTTATGGGCCAGGTGGTGACTGCATA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTATGCAGTCACCACCTaGCCCATAAGCATAGTACTA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHYAVTT*PISIVL
Trigger: TAGTACTATGCTTATGGGCCAGGTGGTGACTGCATA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGATGATCACCTCCTGCTaGCTGGTATTTAATGTACAT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLMITSC*LVFNVH
Trigger: ATGTACATTAAATACCAGCCAGCAGGAGGTGATCAT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAAAACACTGTCAGAACTaGCTATGCCCCTATGATCAC +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQKHCQN*LCPYDH
Trigger: GTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCACTGGACTGTCTTCATaGCATCACTGTAAGCAAACC +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSTGLSS*HHCKQT
Trigger: GGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAAAGGAAAAACAGGATaGATCAGTTTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAKGKTG*ISLHMV
Trigger: CACCATGTGCAAACTGATCCATCCTGTTTTTCCTTT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACCAACACTGCTTTACTaGGCAGTGCTGTGTATGGAA +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAPTLLY*AVLCME
Trigger: TTCCATACACAGCACTGCCCAGTAAAGCAGTGTTGG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCATTTCCTTGATGAACTaGGGTGTAGCTAACCTGACA +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSISLMN*GVANLT
Trigger: TGTCAGGTTAGCTACACCTCAGTTCATCAAGGAAAT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACATTTCCTTGATGAACTaGGGTGTAGCTAACCTGACA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHISLMN*GVANLT
Trigger: TGTCAGGTTAGCTACACCTCAGTTCATCAAGGAAAT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAATAGTAATCATAGCCTaGTGTTCCCAGAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAIVIIA*CSQNFK
Trigger: TTTGAAGTTCTGGGAACATCAGGCTATGATTACTAT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGGTAAATTTGTAGCTTaGGACATCACTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSGKFVA*DITGCV
Trigger: AACACAGCCAGTGATGTCTCAAGCTACAAATTTACC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACGGTAAATTTGTAGCTTaGGACATCACTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHGKFVA*DITGCV
Trigger: AACACAGCCAGTGATGTCTCAAGCTACAAATTTACC...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGATTCAACCCAGGATTTaGTTGTTGCAAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLIQPRI*LLQKHL
Trigger: CAGATGTTTTTGCAACAATCAAATCCTGGGTTGAAT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTTTCCAGAAGAAAGTTaGACGGAACCAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLFPEES*TEPKFN
Trigger: GTTGAATTTTGGTTCCGTTCAACTTTCTTCTGGAAA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAGATGGTTGCTGAACTaGAGTGAGCTGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCRWLLN*SELLLL
Trigger: CAGGAGCAGCAGCTCACTTCAGTTCAGCAACCATCT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACACATCATACCTCACTaGACAAACTGTGACATCACA +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPHIIPH*TNCDIT
Trigger: TGTGATGTCACAGTTTGTTCAGTGAGGTATGATGTG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAATGAAAATGCCATACTaGGGCCTTCCCCAACTTAAA +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQMKMPY*GLPQLK
Trigger: TTTAAGTTGGGGAAGGCCTCAGTATGGCATTTTCAT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACAAGCTGTCTTCTTGTaGTCATTATTCATCATCATC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAQAVFL*SLFIII
Trigger: GATGATGATGAATAATGATCACAAGAAGACAGCTTG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR GCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAAATCAATGCTTTTCTaGAGAACAGTAGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVKSMLF*RTVDLS
Trigger: GGACAAATCTACTGTTCTGCAGAAAAGCATTGATTT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGAAGAGACTCTTCAATaGCAAGTTCTCGTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSEETLQ*QVLVVF
Trigger: AAAGACGACGAGAACTTGGCATTGAAGAGTCTCTTC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTATTTGCTTCTATCATaGGTGTCCGTTGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLYLLLS*VSVVPI
Trigger: AATTGGAACAACGGACACGCATGATAGAAGCAAATA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGACCATGCTTCCGGCTaGAGGCTGAGAAATCACCAT +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHDHASG*RLRNHH
Trigger: ATGGTGATTTCTCAGCCTGCAGCCGGAAGCATGGTC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGACTAGGTACCATGACTaGCCCACAAGCTACAGGAGC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLTRYHD*PTSYRS
Trigger: GCTCCTGTAGCTTGTGGGGCAGTCATGGTACCTAGT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCCTATGATCACCTCCTaGTGGCTGGTATTTAATGTA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHPMITS*WLVFNV
Trigger: TACATTAAATACCAGCCAGCAGGAGGTGATCATAGG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACCTATGATCACCTCCTaGTGGCTGGTATTTAATGTA +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQPMITS*WLVFNV
Trigger: TACATTAAATACCAGCCAGCAGGAGGTGATCATAGG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACCAAAGCACGGTAACTaGAGAGTAGCTAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQPKHGN*RVASIF
Trigger: AAAAATGCTAGCTACTCTGCAGTTACCGTGCTTTGG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTTGATGGAGCTGGACTaGTTCAGTGCTCCTAGCGTC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLLMELD*FSAPSV
Trigger: GACGCTAGGAGCACTGAAGCAGTCCAGCTCCATCAA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTGCTTTACTGGGCAGTaGTGTGTATGGAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHCFTGQ*CVWKFC
Trigger: ACAAAACTTCCATACACAGCACTGCCCAGTAAAGCA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTTCTTACAAGTTATGTaGCACATGAAGCAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLFLQVM*HMKQVL
Trigger: TAACACCTGCTTCATGTGGCACATAACTTGTAAGAA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGATATTCATAGGTAGATaGCTCCTTTGGGTCTATTGT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLIFIGR*LLWVYC
Trigger: ACAATAGACCCAAAGGAGCCATCTACCTATGAATAT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATCTATCTTCATAAGATaGCCTATGTGTGCGTTGTAT +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMASIFIR*PMCALY
Trigger: ATACAACGCACACATAGGCCATCTTATGAAGATAGA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGTCCGTTGTTCCAATTaGTCTTTCAGATGTTGCATG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQVRCSN*SFRCCM
Trigger: CATGCAACATCTGAAAGACCAATTGGAACAACGGAC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGACTGTGGTTGAACCTTaGAAGGGTCGGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLTVVEP*KGRASC
Trigger: ACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATCACCTCCTGCTGGCTaGTATTTAATGTACATCTGT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQSPPAG*YLMYIC
Trigger: ACAGATGTACATTAAATACCAGCCAGCAGGAGGTGA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACAGATATATATGGAATaGCATAAGGTCAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAQIYME*HKVKKG
Trigger: GCCTTTCTTGACCTTATGCCATTCCATATATATCTG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAAAACTGCTACTGCTTaGCTCTTTTGCTATAAGTTT +
Preference number: 4 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVKTATA*LFCYKF
Trigger: AAACTTATAGCAAAAGAGCCAAGCAGTAGCAGTTTT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGAAGGGGTTGGGCTGTaGTCAAACCTTTCCAATGCT +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHEGVGL*SNLSNA
Trigger: AGCATTGGAAAGGTTTGATCACAGCCCAACCCCTTC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTGCACCATCTTCTCATaGGCTGGTAAATGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLCTIFS*AGKCCL
Trigger: CAGGCAGCATTTACCAGCTCATGAGAAGATGGTGCA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCTTCCGGCTGCAGGCTaGGAAATCACCATAGTGTTA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCLPAAG*EITIVL
Trigger: TAACACTATGGTGATTTCTCAGCCTGCAGCCGGAAG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGCAGAGAGAATGAGTTaGGTTGAGGGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCAERMS*VEGFPW
Trigger: CCATGGGAATCCCTCAACTCAACTCATTCTCTCTGC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAAATTCTTTCTTAGATaGCTTGAGGAGGGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHKFFLR*LEEGSA
Trigger: TGCACTTCCCTCCTCAAGTCATCTAAGAAAGAATTT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAACCATTGCCAGCAGTaGACTTGCACTAGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCNHCQQ*TCTSPS
Trigger: GCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGTATCTAGTGAGACTTaGCAAGTTCTAAAGATTCAT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLVSSET*QVLKIH
Trigger: ATGAATCTTTAGAACTTGGCAAGTCTCACTAGATAC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTTCAGCCCTAACTTCTaGATAACTTACTACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSFSPNF*ITYYSV
Trigger: CACACTGTAGTAAGTTATGCAGAAGTTAGGGCTGAA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAATCAAACCTTTCCAATaGTTCCTTGAGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQIKPFQ*FLETDC
Trigger: ACAGTCAGTCTCAAGGAAGCATTGGAAAGGTTTGAT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCACTGAAACTGGGACATaGCTTGTGGAATTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSTETGT*LVELVN
Trigger: ATTTACCAATTCCACAAGGCATGTCCCAGTTTCAGT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGGAACAACTTGGCCTTaGATATTTATAGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPGTTWP*IFIGAS
Trigger: ACTTGCACCTATAAATATGCAAGGCCAAGTTGTTCC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACTAAGGTTTCAAAACTaGTACGGAAACCGGACAATG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSALRFQN*YGNRTM
Trigger: CATTGTCCGGTTTCCGTAGCAGTTTTGAAACCTTAG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAGGGGAGAAGAACAATaGTATTGCCATATTCCACAA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHRGEEQ*YCHIPQ
Trigger: TTGTGGAATATGGCAATAGCATTGTTCTTCTCCCCT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACGAATCTTCATTTGAATaGTCAAGTTTCATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHESSFE*SSFMGQ
Trigger: CTGCCCCATGAAACTTGAGCATTCAAATGAAGATTC...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATGTTTTAAAAGTGTGTaGTATTCCTTCCGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMACFKSV*YSFRKG
Trigger: TCCTTTACGGAAGGAATAGCACACACTTTTAAAACA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAAATAGAGGCATCATGTaGCATTGGTTCTGTCATACT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPNRGIM*HWFCHT
Trigger: AGTATGACAGAACCAATGGCACATGATGCCTCTATT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCAATAGAGGCATCATGTaGCATTGGTTCTGTCATACT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSNRGIM*HWFCHT
Trigger: AGTATGACAGAACCAATGGCACATGATGCCTCTATT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCAATTGTGGTTGACGTaGTTTAACTACCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHQLWLT*FNYRSL
Trigger: TAGAGAACGGTAGTTAAAGCACGTCAACCACAATTG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGGTAGATGGCTCCTTTaGGTCTATTGTTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLGRWLL*VYCSSQ
Trigger: CTGCGAGGAACAATAGACCCAAAGGAGCCATCTACC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTTAGTAGGAACAACTTaGCCTTGCATATTTATAGGT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLLVGTT*PCIFIG
Trigger: ACCTATAAATATGCAAGGCCAAGTTGTTCCTACTAA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCCCCTGACATGGCAGTaGTATGTCCTCTGTAACACT +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCPLTWQ*YVLCNT
Trigger: AGTGTTACAGAGGACATACCACTGCCATGTCAGGGG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAGCAAACCCCTGACATaGCAGTGGTATGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCSKPLT*QWYVLC
Trigger: ACAGAGGACATACCACTGCCATGTCAGGGGTTTGCT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACGGATCAGTTTGCACATaGTGTCAGAATTTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHGSVCT*CQNFRK
Trigger: TTTCCTGAAATTCTGACACCATGTGCAAACTGATCC...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGACTATTTGTGGAGATaGGAAATAATTGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPDYLWR*EIIEGA
Trigger: AGCCCCTTCAATTATTTCCCATCTCCACAAATAGTC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAAATAAACAGGCTCATTaGTCTCTTTTGGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPNKQAH*SLLVST
Trigger: TGTGGACACCAAAAGAGACCAATGAGCCTGTTTATT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGCTATACCTAGCCTGTaGGACTCCATAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLAIPSL*DSIASL
Trigger: CAGAGAAGCTATGGAGTCCCACAGGCTAGGTATAGC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGAAAAATTCTTTGATTTaGGGGGATCAGCGTTATAGT +
Preference number: 4 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLKNSLI*GDQRYS
Trigger: ACTATAACGCTGATCCCCCCAAATCAAAGAATTTTT...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAATTTCACTAGCATCTaGCTGTGCAGTGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHNFTSI*LCSDFF
Trigger: AAAGAAATCACTGCACAGTCAGATGCTAGTGAAATT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGATGGGTGGTGCCCTGTaGTCTAGAAACAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLMGGAL*SRNRNF
Trigger: GAAGTTTCTGTTTCTAGATCACAGGGCACCACCCAT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAATAGTAATCATAGCCTaGTGTTCCCAGAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQIVIIA*CSQNFK
Trigger: TTTGAAGTTCTGGGAACATCAGGCTATGATTACTAT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGTTTATACGATTATCTaGCCCAGAATCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSVYTII*PRILAF
Trigger: AAAAGCCAAGATTCTGGGTCAGATAATCGTATAAAC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTCTGAGACGGCCGTGTaGGATGATTTTCTTGAACTC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLSETAV*DDFLEL
Trigger: GAGTTCAAGAAAATCATCTCACACGGCCGTCTCAGA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATGGGAATTTATGGACTaGCTACTAAATGATGACCTT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPWEFMD*LLNDDL
Trigger: AAGGTCATCATTTAGTAGTCAGTCCATAAATTCCCA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATGGGAATTTATGGACTaGCTACTAAATGATGACCTT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQWEFMD*LLNDDL
Trigger: AAGGTCATCATTTAGTAGTCAGTCCATAAATTCCCA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTCTTCTTGTTGCCGATaGATATTTGCTTCTATCATG +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHSSCCR*IFASIM
Trigger: CATGATAGAAGCAAATATTCATCGGCAACAAGAAGA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAATTCAACCCAGGATTTaGTTGTTGCAAAAACATCTG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQIQPRI*LLQKHL
Trigger: CAGATGTTTTTGCAACAATCAAATCCTGGGTTGAAT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATTTCCAGAAGAAAGTTaGACGGAACCAAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPFPEES*TEPKFN
Trigger: GTTGAATTTTGGTTCCGTTCAACTTTCTTCTGGAAA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGAGAATGAGTTGAGTTaGGGGATTCCCATGGAGCAA +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLENELS*GIPMEQ
Trigger: TTGCTCCATGGGAATCCCTCAACTCAACTCATTCTC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGAGATGGGAAATAATTaGAGGGGCTGGAGTAGGACA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCEMGNN*RGWSRT
Trigger: TGTCCTACTCCAGCCCCTTCAATTATTTCCCATCTC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAAGGTTGGAACTGTATaGATCAGATTTGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHKVGTV*IRFERS
Trigger: ACTCCTTTCAAATCTGATTCATACAGTTCCAACCTT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAAATTCAATTGTGGTTaGCGTGCTTTAACTACCGTT +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHKFNCG*RALTTV
Trigger: AACGGTAGTTAAAGCACGTCAACCACAATTGAATTT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAACTGAAACTGGGACATaGCTTGTGGAATTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSATETGT*LVELVN
Trigger: ATTTACCAATTCCACAAGGCATGTCCCAGTTTCAGT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATATTTGCTTCTATCATaGGTGTCCGTTGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQYLLLS*VSVVPI
Trigger: AATTGGAACAACGGACACGCATGATAGAAGCAAATA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGTGACTGAGGGAAGGTaGTCTGTTGTAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLVTEGR*SVVEEM
Trigger: CATTTCCTCTACAACAGAGCACCTTCCCTCAGTCAC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAAGAAAAGCAGCTAGCTaGTCCTTTAAATTAGCAATG +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPRKAAS*SFKLAM
Trigger: CATTGCTAATTTAAAGGAGCAGCTAGCTGCTTTTCT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATCAAAGAGGCAGCTGGTaGTTACTACCTCTTCCACTA +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHQRGSW*LLPLPL
Trigger: TAGTGGAAGAGGTAGTAAGCACCAGCTGCCTCTTTG...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTCGATTCTATTCCTTTaGAATTACTTCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHSILFL*NYFRSS
Trigger: GGAGCTTCTGAAGTAATTGCAAAGGAATAGAATCGA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTCGATTCTATTCCTTTaGAATTACTTCAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEHSILHLMKLLELSLLSSILFL*NYFRSS
Trigger: GGAGCTTCTGAAGTAATTGCAAAGGAATAGAATCGA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAAATGCTGAAATGACATaGCAACATTTCAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSANAEMT*QHFRAH
Trigger: ATGTGCCCTGAAATGTTGGCATGTCATTTCAGCATT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCATCCTTCATGTGTGTATaGAATTCAGAATTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSASFMCV*NSEFRQ
Trigger: CTGCCGAAATTCTGAATTGCATACACACATGAAGGA...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAATATTCATAGGTAGATaGCTCCTTTGGGTCTATTGT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPIFIGR*LLWVYC
Trigger: ACAATAGACCCAAAGGAGCCATCTACCTATGAATAT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTGCTCTGTGTCTGACTaGGTAGAGATGTTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHCSVSD*VEMFAD
Trigger: GTCAGCAAACATCTCTACCCAGTCAGACACAGAGCA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAAAAGGAAAAACAGGATaGATCAGTTTGCACATGGTG +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAKGKTG*ISLHMV
Trigger: CACCATGTGCAAACTGATCCATCCTGTTTTTCCTTT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTTGGTTCTGTCATACTaGCCTTTGACTGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHLVLSY*PLTVLG
Trigger: CCCCAACACAGTCAAAGGCCAGTATGACAGAACCAA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGGCATCATGTGCCATTaGTTCTGTCATACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLGIMCH*FCHTGL
Trigger: AAGGCCAGTATGACAGAACCAATGGCACATGATGCC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCAATACTGCATCTCATaGAACTGCTGGAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLQYCIS*NCWNFP
Trigger: GGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATCAATACTGCATCTCATaGAACTGCTGGAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHQYCIS*NCWNFP
Trigger: GGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTG...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTCATTAGTGCCTTTCTaGTTCCCTGGAGGTCATTTC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHSLVPF*FPGGHF
Trigger: GAAATGACCTCCAGGGAATCAGAAAGGCACTAATGA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATACGGAAACCGGACAATaGCTTCAAGATGGTGAGTTA +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHTETGQ*LQDGEL
Trigger: TAACTCACCATCTTGAAGTCATTGTCCGGTTTCCGT...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCTGTTCCAATGCTTGTaGGCAAGAAGGATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCLFQCL*ARRILK
Trigger: TTTGAGGATCCTTCTTGCTCACAAGCATTGGAACAG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATCATTCCAGTATGGTCTaGATGGTAACTGTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHHSSMV*MVTVLA
Trigger: AGCCAGAACAGTTACCATTCAGACCATACTGGAATG...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAGTATCTAGTGAGACTTaGCAAGTTCTAAAGATTCAT +
Preference number: 4 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPVSSET*QVLKIH
Trigger: ATGAATCTTTAGAACTTGGCAAGTCTCACTAGATAC...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGAGATAACGCTTTCATaGAGCATACAAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQEITLS*SIQNVL
Trigger: CAAAACATTTTGTATGCTGCATGAAAGCGTTATCTC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCTGGGGCTTGTCTTATaGTTTGTTGCTGTCAACCTA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCLGLVL*FVAVNL
Trigger: TAGGTTGACAGCAACAAAGCATAAGACAAGCCCCAG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTGTTTTAAAAGTGTGTaGTATTCCTTCCGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHCFKSV*YSFRKG
Trigger: TCCTTTACGGAAGGAATAGCACACACTTTTAAAACA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATGCTTTAAAAGCAATTaGTTCTTTGAACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQCFKSN*FFEPLS
Trigger: AGAAAGGGGTTCAAAGAAGCAATTGCTTTTAAAGCA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTACATTTACAAAAACTaGTACTGCTTGGCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ITIASSELALVQANSKTHYIYKN*YCLALL
Trigger: CAAAAGAGCCAAGCAGTAGCAGTTTTTGTAAATGTA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCATTCTTACAAGTTATGTaGCACATGAAGCAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAFLQVM*HMKQVL
Trigger: TAACACCTGCTTCATGTGGCACATAACTTGTAAGAA...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGCAAATACCCTATTATaGGTGGTGCCCTGTGATCTA +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHANTLL*VVPCDL
Trigger: TAGATCACAGGGCACCACCCATAATAGGGTATTTGC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGCAAATACCCTATTATaGGTGGTGCCCTGTGATCTA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCANTLL*VVPCDL
Trigger: TAGATCACAGGGCACCACCCATAATAGGGTATTTGC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATTAGTAGGAACAACTTaGCCTTGCATATTTATAGGT +
Preference number: 4 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQLVGTT*PCIFIG
Trigger: ACCTATAAATATGCAAGGCCAAGTTGTTCCTACTAA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAAACACTGTCAGAACTaGCTATGCCCCTATGATCAC +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCKHCQN*LCPYDH
Trigger: GTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATACTGGACTGTCTTCATaGCATCACTGTAAGCAAACC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHTGLSS*HHCKQT
Trigger: GGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGACTGGACTGTCTTCATaGCATCACTGTAAGCAAACC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLTGLSS*HHCKQT
Trigger: GGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGGTAAATTTGTAGCTTaGGACATCACTGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHGKFVA*DITGCV
Trigger: AACACAGCCAGTGATGTCTCAAGCTACAAATTTACC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR TCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTCACTGAACAAACTGTaGCATCACAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHSLNKL*HHSQSM
Trigger: CATACTTTGGCTGTGATGTCACAGTTTGTTCAGTGA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTACTGCTTTAAGGCAATaGCCAACAACTACAGCACTT +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCTALRQ*PTTTAL
Trigger: AAGTGCTGTAGTTGTTGGTCATTGCCTTAAAGCAGT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGAAGAGACTCTTCAATaGCAAGTTCTCGTCGTCTTT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLEETLQ*QVLVVF
Trigger: AAAGACGACGAGAACTTGGCATTGAAGAGTCTCTTC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGAGGCAGCATTTTCTCTaGCAACTAATTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLRQHFL*QLIPGT
Trigger: AGTTCCTGGAATTAGTTGGCAGAGAAAATGCTGCCT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATCAGGATGGATCAGTTTaGACATGGTGTCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHQDGSV*TWCQNF
Trigger: GAAATTCTGACACCATGTGCAAACTGATCCATCCTG...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTACTCACATGCTACCTaGATCTCCCATACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHYSHAT*ISHTFL
Trigger: GAGAAAAGTATGGGAGATGCAGGTAGCATGTGAGTA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTACTCACATGCTACCTaGATCTCCCATACTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLYSHAT*ISHTFL
Trigger: GAGAAAAGTATGGGAGATGCAGGTAGCATGTGAGTA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGTCCGTTGTTCCAATTaGTCTTTCAGATGTTGCATG +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCVRCSN*SFRCCM
Trigger: CATGCAACATCTGAAAGACCAATTGGAACAACGGAC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGATCAAACCTTTCCAATaGTTCCTTGAGACTGACTGT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLIKPFQ*FLETDC
Trigger: ACAGTCAGTCTCAAGGAAGCATTGGAAAGGTTTGAT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTCCCCCGACTATTTGTaGAGATGGGAAATAATTGAA +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHSPDYL*RWEIIE
Trigger: TTCAATTATTTCCCATCTCCACAAATAGTCGGGGGA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAGGGCCACAGGTAATTaGAAAGGTTATAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCRATGN*KGYRLE
Trigger: TTCAAGTCTATAACCTTTCCAATTACCTGTGGCCCT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTCCAAACACTTAAAATaGCAAGTGCCTTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLSKHLK*QVPLCC
Trigger: ACAGCACAAAGGCACTTGCCATTTTAAGTGTTTGGA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGCTCAAAATGATGATTaGAGGTATCTAGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLAQNDD*RYLVRL
Trigger: AAGTCTCACTAGATACCTTCAATCATCATTTTGAGC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGCTCAAAATGATGATTaGAGGTATCTAGTGAGACTT +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCAQNDD*RYLVRL
Trigger: AAGTCTCACTAGATACCTTCAATCATCATTTTGAGC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCATCTGACTGTGCAGTaGTTTCTTTATGTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLHLTVQ*FLYVFV
Trigger: TACGAAAACATAAAGAAATCACTGCACAGTCAGATG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR TCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGGTTTATACGATTATCTaGCCCAGAATCTTGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLVYTII*PRILAF
Trigger: AAAAGCCAAGATTCTGGGTCAGATAATCGTATAAAC...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTATTTGCTTCTATCATaGGTGTCCGTTGTTCCAATT +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHYLLLS*VSVVPI
Trigger: AATTGGAACAACGGACACGCATGATAGAAGCAAATA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CCA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCAGATATATATGGAATaGCATAAGGTCAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLQIYME*HKVKKG
Trigger: GCCTTTCTTGACCTTATGCCATTCCATATATATCTG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAAATCAATGCTTTTCTaGAGAACAGTAGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCKSMLF*RTVDLS
Trigger: GGACAAATCTACTGTTCTGCAGAAAAGCATTGATTT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGAGATAACGCTTTCATaGAGCATACAAAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHEITLS*SIQNVL
Trigger: CAAAACATTTTGTATGCTGCATGAAAGCGTTATCTC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR GCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTGCTTTAAAAGCAATTaGTTCTTTGAACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCCFKSN*FFEPLS
Trigger: AGAAAGGGGTTCAAAGAAGCAATTGCTTTTAAAGCA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTATAGGTGCAAGTTGCTaGATATTAGATGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCIGASC*ILDEFP
Trigger: TGGAAATTCATCTAATATCCAGCAACTTGCACCTAT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CCA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTTAGTAGGAACAACTTaGCCTTGCATATTTATAGGT +
Preference number: 4 (lower is better)
Translates to: IREPNIAPLKPFIILHVCLVGTT*PCIFIG
Trigger: ACCTATAAATATGCAAGGCCAAGTTGTTCCTACTAA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS TCA 90 bp GCGGCTCCGGCTTCTTCCCTCCCCCACCCAGGTCTCCCGCTGCGGTaGCTCGGAACCACTACCCCGCCTGTGTCCAGGAGGCGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: AAPASSLPHPGLPLR*LGTTTPPVSRRRRG
Trigger: GCCGCGGCGCCTCCTGGACACAGGCGGGGTAGTGGTTCCGAGTCACCGCAGCGGGAGACCTGGGTGGGGGAGGGAAGAAGCCGGAGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509151.5
ENST00000513033.1
CDS GCA 90 bp TTGCGGCGGCTCCGGCTTCTTCCCTCCCCCACCCAGGTCTCCCGCTaGGGTGACTCGGAACCACTACCCCGCCTGTGTCCAGGAGGCGCC +
Preference number: 5 (lower is better)
Translates to: LRRLRLLPSPTQVSR*GDSEPLPRLCPGGA
Trigger: GGCGCCTCCTGGACACAGGCGGGGTAGTGGTTCCGAGTCACCGCAGCGGGAGACCTGGGTGGGGGAGGGAAGAAGCCGGAGCCGCCGCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509151.5
ENST00000513033.1
CDS CCA 90 bp AATCTACAAACGCCAGCGGCGGTGACGGGGAACGGGAAGCGCGGGTaGACGGAAGAAGAGAAACCGAGCGCCTCGCCGCCAACCCTCGAA +
Preference number: 5 (lower is better)
Translates to: NLQTPAAVTGNGKRG*TEEEKPSASPPTLE
Trigger: TTCGAGGGTTGGCGGCGAGGCGCTCGGTTTCTCTTCTTCCGTCCACCCGCGCTTCCCGTTCCCCGTCACCGCCGCTGGCGTTTGTAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS TCA 90 bp GCGGTGGCTGGGTCAGCTGAGCCTGAGATGGTTGCTGAACTGAAGTaGGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCTGCTGCGTTA +
Preference number: 5 (lower is better)
Translates to: AVAGSAEPEMVAELK*AAAPGSSAAAAAAL
Trigger: TAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGTTCAGCAACCATCTCAGGCTCAGCTGACCCAGCCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS TCA 90 bp TTGTTGCGGTGGCTGGGTCAGCTGAGCCTGAGATGGTTGCTGAACTaGAGTGAGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLRWLGQLSLRWLLN*SELLLLGALLLLLL
Trigger: CAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGTTCAGCAACCATCTCAGGCTCAGCTGACCCAGCCACCGCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS TCA 90 bp ACCCAGCTTCACTGGCGGAAAGAAATCTACAAACGCCAGCGGCGGTaGCGGGGAACGGGAAGCGCGGGTGGACGGAAGAAGAGAAACCGA +
Preference number: 5 (lower is better)
Translates to: TQLHWRKEIYKRQRR*RGTGSAGGRKKRNR
Trigger: TCGGTTTCTCTTCTTCCGTCCACCCGCGCTTCCCGTTCCCCGTCACCGCCGCTGGCGTTTGTAGATTTCTTTCCGCCAGTGAAGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS CCA 90 bp CCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGCTACTGTaGTTGAACCTTGGAAGGGTCGGGCAAGCTGTCAGTCCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: PLPPLMSREEARVLL*LNLGRVGQAVSPVP
Trigger: CGGCACAGGACTGACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGTAGCACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCCGTCGGGATCTTGGTaGGTGTTGAGGAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLPSGSW*VLRKGL
Trigger: CAGACCCTTCCTCAACACCAACCAAGATCCCGACGG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGGCTCCTTTGGGTCTATaGTTCCTCGCAGCATGTGAC +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLAPLGL*FLAACD
Trigger: GTCACATGCTGCGAGGAACAATAGACCCAAAGGAGC...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCCGTCGGGATCTTGGTaGGTGTTGAGGAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLPSGSW*VLRKGL
Trigger: CAGACCCTTCCTCAACACCAACCAAGATCCCGACGG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCAGGGGCATCTGGAGTaGGCCCCTCCACTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: ITIASSELALVQANSKTHQGHLE*APPLPS
Trigger: GGACGGCAGTGGAGGGGCCAACTCCAGATGCCCCTG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGTCTTTCTTAGATGACTaGAGGAGGGAAGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLSFLDD*RREVQG
Trigger: CCCCTGCACTTCCCTCCTCAAGTCATCTAAGAAAGA...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGGATCTTGGTTGGTGTaGAGGAAGGGTCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWGSWLV*RKGLRR
Trigger: CCGTCTCAGACCCTTCCTCAACACCAACCAAGATCC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACCTGTGCCGGCTGAGTaGCTGCTGTTGCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAPVPAE*LLLLRL
Trigger: CAGTCTCAGCAACAGCAGCAACTCAGCCGGCACAGG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACGTGTGCTACTGTGGTaGAACCTTGGAAGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVRVLLW*NLGRVG
Trigger: CCCGACCCTTCCAAGGTTCAACCACAGTAGCACACG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS GCA 90 bp CTCTGCTGCTGCTGCTGCTGCGTTACTGACAATGTCTGTGACTGTTaGTGTTGTGTAGCAAAAGTAGGATATGCAGTCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LCCCCCCVTDNVCDC*CCVAKVGYAVTTWP
Trigger: GGGCCAGGTGGTGACTGCATATCCTACTTTTGCTACACAACAGCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS GCA 90 bp ACTGAAGTGAGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCTGCTaGGTTACTGACAATGTCTGTGACTGTTGCTGTTGTGTAGCAAAA +
Preference number: 5 (lower is better)
Translates to: TEVSCCSWELCCCCC*VTDNVCDCCCCVAK
Trigger: TTTTGCTACACAACAGCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CCA 90 bp ATGACCTTCTTTGCACCATCTTCTCATGAGCTGGTAAATGCTGCCTaGGTGGAGTGCTCGTATCCGTCGGGATCTTGGTTGGTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: MTFFAPSSHELVNAA*VECSYPSGSWLVLR
Trigger: CCTCAACACCAACCAAGATCCCGACGGATACGAGCACTCCACCCAGGCAGCATTTACCAGCTCATGAGAAGATGGTGCAAAGAAGGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CCA 90 bp GTCCTGAGTGAATGTAGTTACTGCAGCACTCTGGGTGCTGTTTTGTaGCATACTAGATGGAATCTGGACCATGCTTCCGGCTGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VLSECSYCSTLGAVL*HTRWNLDHASGCRL
Trigger: CAGCCTGCAGCCGGAAGCATGGTCCAGATTCCATCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000479384.1
ENST00000511124.1
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGCTCCTTTGGGTCTATaGTTCCTCGCAGCATGTGAC +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLAPLGL*FLAACD
Trigger: GTCACATGCTGCGAGGAACAATAGACCCAAAGGAGC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGCTGAGTTGCTGCTGTaGCTGAGACTGATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCAELLL*LRLMLL
Trigger: CAGCAACATCAGTCTCAGCAACAGCAGCAACTCAGC...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGCTGAGTTGCTGCTGTaGCTGAGACTGATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLAELLL*LRLMLL
Trigger: CAGCAACATCAGTCTCAGCAACAGCAGCAACTCAGC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGGATGTAAACTCTTCATaGGGTTCTTCAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLDVNSS*GSSTVH
Trigger: GTGCACTGTTGAAGAACCCAATGAAGAGTTTACATC...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGTATCCGTCGGGATCTaGGTTGGTGTTGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLVSVGI*VGVEEG
Trigger: CCCTTCCTCAACACCAACCAAGATCCCGACGGATAC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACCTGTGCCGGCTGAGTaGCTGCTGTTGCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPPVPAE*LLLLRL
Trigger: CAGTCTCAGCAACAGCAGCAACTCAGCCGGCACAGG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGTCTTTCTTAGATGACTaGAGGAGGGAAGTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLSFLDD*RREVQG
Trigger: CCCCTGCACTTCCCTCCTCAAGTCATCTAAGAAAGA...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS GCA 90 bp GAGGACCTCTACAAAGCTACAAACACTTTCAAAGAATATAAACTCTaGGGCGCTGCGTGTAGGAAATTACACTCCAGGGGCCAGAGCGCC +
Preference number: 5 (lower is better)
Translates to: EDLYKATNTFKEYKL*GAACRKLHSRGQSA
Trigger: GGCGCTCTGGCCCCTGGAGTGTAATTTCCTACACGCAGCGCCGCAGAGTTTATATTCTTTGAAAGTGTTTGTAGCTTTGTAGAGGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGCTCCTTTGGGTCTATaGTTCCTCGCAGCATGTGAC +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLAPLGL*FLAACD
Trigger: GTCACATGCTGCGAGGAACAATAGACCCAAAGGAGC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTACCAGAATCTTGGCTTTaGTCAGCAGCTGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVPESWL*SAAVSG
Trigger: TCCTGAGACAGCTGCTGACAAAAGCCAAGATTCTGG...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGCTGAGTTGCTGCTGTaGCTGAGACTGATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAAELLL*LRLMLL
Trigger: CAGCAACATCAGTCTCAGCAACAGCAGCAACTCAGC...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCCGTGTGCTACTGTGGTaGAACCTTGGAAGGGTCGGG +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSRVLLW*NLGRVG
Trigger: CCCGACCCTTCCAAGGTTCAACCACAGTAGCACACG...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCTGTACATAGAGAATTaGAACCCACACAACATTCTG +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLLYIEN*NPHNIL
Trigger: CAGAATGTTGTGTGGGTTCAAATTCTCTATGTACAG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCTGCTGAATCTTCATTaGAATGCTCAAGTTTCATGG +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLLLNLH*NAQVSW
Trigger: CCATGAAACTTGAGCATTCAAATGAAGATTCAGCAG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGGACACCGAAATCACTTaGATGAGAAAACAGAACACA +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLDTEIT*MRKQNT
Trigger: TGTGTTCTGTTTTCTCATCAAAGTGATTTCGGTGTC...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCAGGGGCATCTGGAGTaGGCCCCTCCACTGCCGTCC +
Preference number: 5 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLQGHLE*APPLPS
Trigger: GGACGGCAGTGGAGGGGCCAACTCCAGATGCCCCTG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGTTTAGCTCCACCGTTTaGGAAGTAAAAATGATGAGC +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLFSSTV*EVKMMS
Trigger: GCTCATCATTTTTACTTCCAAAACGGTGGAGCTAAA...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS GCA 90 bp GCTGTTTTGTGGCATACTAGATGGAATCTGGACCATGCTTCCGGCTaGAGGCTGAGAAATCACCATAGTGTTATACAGTGGGGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: AVLWHTRWNLDHASG*RLRNHHSVIQWGCK
Trigger: CTTACAGCCCCACTGTATAACACTATGGTGATTTCTCAGCCTGCAGCCGGAAGCATGGTCCAGATTCCATCTAGTATGCCACAAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000479384.1
ENST00000511124.1
ENST00000513440.6
CDS CCA 90 bp GACTGTTGCTGTTGTGTAGCAAAAGTAGGATATGCAGTCACCACCTaGCCCATAAGCATAGTACTAGGTACCATGACTGCCCCACAAGCT +
Preference number: 5 (lower is better)
Translates to: DCCCCVAKVGYAVTT*PISIVLGTMTAPQA
Trigger: AGCTTGTGGGGCAGTCATGGTACCTAGTACTATGCTTATGGGCCAGGTGGTGACTGCATATCCTACTTTTGCTACACAACAGCAACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTGGCCTATGTGTGCGTaGTATAGTTCCTTCAAAACC +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWWPMCA*YSSFKT
Trigger: GGTTTTGAAGGAACTATACAACGCACACATAGGCCA...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCCAGAATCTTGGCTTTaGTCAGCAGCTGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLPESWL*SAAVSG
Trigger: TCCTGAGACAGCTGCTGACAAAAGCCAAGATTCTGG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTGTGAGATGATTTTCTaGAACTCCGAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWCEMIF*NSEKRQ
Trigger: CTGCCTCTTCTCGGAGTTCAAGAAAATCATCTCACA...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGGATCTTGGTTGGTGTaGAGGAAGGGTCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQGSWLV*RKGLRR
Trigger: CCGTCTCAGACCCTTCCTCAACACCAACCAAGATCC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAGTATCCGTCGGGATCTaGGTTGGTGTTGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQVSVGI*VGVEEG
Trigger: CCCTTCCTCAACACCAACCAAGATCCCGACGGATAC...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGTATCATGCGTGTCCGTaGTTCCAATTGGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLYHACP*FQLVFQ
Trigger: CTGAAAGACCAATTGGAACAACGGACACGCATGATA...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTTGCCGATGAATATTaGCTTCTATCATGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVADEY*LLSCVS
Trigger: GGACACGCATGATAGAAGCAAATATTCATCGGCAAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGAGTATTCATTCCACTTaGAATCTGGTTAGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLSIHST*NLVSRN
Trigger: GTTCCTACTAACCAGATTCAAAGTGGAATGAATACT...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GTTGGGGGAGGGGGTCGCTACCAAGTCTACTGGACTGTCTTCATGGCATCACTGCAAATCACTGGCATCTaGTTATTACTATTCCATTCC +
Preference number: 5 (lower is better)
Translates to: VGGGGRYQVYWTVFMASLQITGI*LLLFHS
Trigger: GGAATGGAATAGTAATAACAAGATGCCAGTGATTTG...CAGTGATGCCATGAAGACAGTCCAGTAGACTTGGTAGCGACCCCCTCCCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS TCA 90 bp AAACTGATTCTTCAGGAAACTATAGGTTCAAGGTACTCTTCTATATaGCCAACCATAAGTCTCAGAATTCGGGAGCGCTCGCGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: KLILQETIGSRYSSI*PTISLRIRERSRRR
Trigger: CCGCCGCCGCGAGCGCTCCCGAATTCTGAGACTTATGGTTGGTCATATAGAAGAGTACCTTGAACCTATAGTTTCCTGAAGAATCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506923.5
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGTTCCTTCAAAACCATaGTGTGCTGAAGAGGATACA +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLVPSKP*CAEEDT
Trigger: TGTATCCTCTTCAGCACACAATGGTTTTGAAGGAAC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTTCCTTCAAAACCATaGTGTGCTGAAGAGGATACA +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVPSKP*CAEEDT
Trigger: TGTATCCTCTTCAGCACACAATGGTTTTGAAGGAAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGATGTAAACTCTTCATaGGGTTCTTCAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLDVNSS*GSSTVH
Trigger: GTGCACTGTTGAAGAACCCAATGAAGAGTTTACATC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAACTCTGGGTGCTGTTTaGTGGCATACTAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVTLGAV*WHTRWN
Trigger: ATTCCATCTAGTATGCCACAAAACAGCACCCAGAGT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACATCCCCTTCCTCCCTaGATGTCAAGAGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQHPLPP*MSREEA
Trigger: TGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGACAGGATGGATCAGTTaGCACATGGTGTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLTGWIS*HMVSEF
Trigger: AAATTCTGACACCATGTGCAAACTGATCCATCCTGT...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTCCACAACATCCCCCTaGTCTGTGTACATATGCTCA +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLSTTSP*SVYICS
Trigger: TGAGCATATGTACACAGACAAGGGGGATGTTGTGGA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATCCACAACATCCCCCTaGTCTGTGTACATATGCTCA +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMASTTSP*SVYICS
Trigger: TGAGCATATGTACACAGACAAGGGGGATGTTGTGGA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGAAAATTCCAATCAGCTaGTCCTGGCTAGAAAGACTC +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWKIPIS*SWLERL
Trigger: GAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTT...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGGGCATCTACAATCTCTaGACTCCACCACATTCAAAA +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLGIYNL*TPPHSK
Trigger: TTTTGAATGTGGTGGAGTCAAGAGATTGTAGATGCC...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGCTACCGTTCTCTAAGTaGTGTGCTATACCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLLPFSK*CAIPSL
Trigger: CAGGCTAGGTATAGCACACAACTTAGAGAACGGTAG...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS GCA 90 bp TCTGTGACTGTTGCTTATCTGCCTGTCCTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTTTTGTGGCATACTAGATGGAATCTG +
Preference number: 5 (lower is better)
Translates to: SVTVAYLPVLSECSY*STLGAVLWHTRWNL
Trigger: CAGATTCCATCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGACAGGCAGATAAGCAACAGTCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511124.1
CDS-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAAGCCAAATCCACTGTaGCCCCTTAGTCAGGAACCT +
Preference number: 5 (lower is better)
Translates to: ITIASSELALVQANSKTHKPNPL*PLSQEP
Trigger: AGGTTCCTGACTAAGGGGCAACAGTGGATTTGGCTT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCAAGCCAAATCCACTGTaGCCCCTTAGTCAGGAACCT +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSKPNPL*PLSQEP
Trigger: AGGTTCCTGACTAAGGGGCAACAGTGGATTTGGCTT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACCAGAATCTTGGCTTTaGTCAGCAGCTGTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPPESWL*SAAVSG
Trigger: TCCTGAGACAGCTGCTGACAAAAGCCAAGATTCTGG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCTTTCCAATGCTTCCTaGAGACTGACTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWLSNAS*RLTVFI
Trigger: TATAAACACAGTCAGTCTCAAGGAAGCATTGGAAAG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTGTGAGATGATTTTCTaGAACTCCGAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLCEMIF*NSEKRQ
Trigger: CTGCCTCTTCTCGGAGTTCAAGAAAATCATCTCACA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGTTGCCGATGAATATTaGCTTCTATCATGCGTGTCC +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLVADEY*LLSCVS
Trigger: GGACACGCATGATAGAAGCAAATATTCATCGGCAAC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGTTAGTAGGAACAACTaGGCCTTGCATATTTATAGG +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCVSRNN*ALHIYR
Trigger: CCTATAAATATGCAAGGCCAAGTTGTTCCTACTAAC...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGCACAAGTTGTTGACCTaGAGAAAATCTTATCTGCCT +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLHKLLT*RKSYLP
Trigger: AGGCAGATAAGATTTTCTCAAGGTCAACAACTTGTG...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCACAAGTTGTTGACCTaGAGAAAATCTTATCTGCCT +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCHKLLT*RKSYLP
Trigger: AGGCAGATAAGATTTTCTCAAGGTCAACAACTTGTG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATCCTGTGCCGGCTGAGTaGCTGCTGTTGCTGAGACTG +
Preference number: 5 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHPVPAE*LLLLRL
Trigger: CAGTCTCAGCAACAGCAGCAACTCAGCCGGCACAGG...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCACATCCCCTTCCTCCCTaGATGTCAAGAGAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAHPLPP*MSREEA
Trigger: TGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATG...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGGGGGCGGGATAGCTTaGCAACCCAAATTTAAGAGA +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSGGGIA*QPKFKR
Trigger: TCTCTTAAATTTGGGTTGCAAAGCTATCCCGCCCCC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGCTGCTGAATCTTCATTaGAATGCTCAAGTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWLLNLH*NAQVSW
Trigger: CCATGAAACTTGAGCATTCAAATGAAGATTCAGCAG...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS CCA 90 bp CTATCATGCGTGTCCGTTGTTCCAATTGGTCTTTCAGATGTTGCATaGCTCCTAATTGAGCTGAAAACTGAAACTGGGACATGCCTTGTG +
Preference number: 5 (lower is better)
Translates to: LSCVSVVPIGLSDVA*LLIELKTETGTCLV
Trigger: CACAAGGCATGTCCCAGTTTCAGTTTTCAGCTCAATTAGGAGCCATGCAACATCTGAAAGACCAATTGGAACAACGGACACGCATGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGGATACTCTTTTCGCTTaGTCCTTGTCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLDTLFA*SLSSSS
Trigger: GGAAGAAGATGACAAGGACAAAGCGAAAAGAGTATC...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTTGCAGAACAGTAGATTaGTCCATCTTTCTAGCATTA +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCCRTVD*SIFLAL
Trigger: TAATGCTAGAAAGATGGACAAATCTACTGTTCTGCA...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCCGTCGGGATCTTGGTaGGTGTTGAGGAAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCPSGSW*VLRKGL
Trigger: CAGACCCTTCCTCAACACCAACCAAGATCCCGACGG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTGTCCGTTGTTCCAATaGGTCTTTCAGATGTTGCAT +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLCPLFQ*VFQMLH
Trigger: ATGCAACATCTGAAAGACCAATTGGAACAACGGACA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCATGTCCGTTGTTCCAATaGGTCTTTCAGATGTTGCAT +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMACPLFQ*VFQMLH
Trigger: ATGCAACATCTGAAAGACCAATTGGAACAACGGACA...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGGAACAACTTGGCCTaGCATATTTATAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMARNNLA*HIYRCK
Trigger: CTTGCACCTATAAATATGCAAGGCCAAGTTGTTCCT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAGTTAGTAGGAACAACTaGGCCTTGCATATTTATAGG +
Preference number: 5 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVVSRNN*ALHIYR
Trigger: CCTATAAATATGCAAGGCCAAGTTGTTCCTACTAAC...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTAGTATTCATTCCACTTaGAATCTGGTTAGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCSIHST*NLVSRN
Trigger: GTTCCTACTAACCAGATTCAAAGTGGAATGAATACT...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TCCAGGCACCTAAAACACTGTCAGAACTGGCTATGCCCCTATGATCACCTCCTGTTTGTTGACTCTGAGTaGATGTACTCTGTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: SRHLKHCQNWLCPYDHLLFVDSE*MYSVKS
Trigger: AGACTTTACAGAGTACATCAACTCAGAGTCAACAAA...CAGGAGGTGATCATAGGGGCATAGCCAGTTCTGACAGTGTTTTAGGTGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCAAATCACTGGCATCTaGTTATTACTATTCCATTCC +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCQITGI*LLLFHS
Trigger: GGAATGGAATAGTAATAACAAGATGCCAGTGATTTG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAAGGCATCATGTGCCATaGGTTCTGTCATACTGGCCT +
Preference number: 5 (lower is better)
Translates to: LPFKNSNQLVLARKTHSARHHVP*VLSYWP
Trigger: AGGCCAGTATGACAGAACCAATGGCACATGATGCCT...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTCTTAATGGGCCATCCCCTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTCTGTGTATGGAAGTTTaGTTTTGTTTTCAAAGGACC +
Preference number: 5 (lower is better)
Translates to: TLNGPSPSSLDVKRGSTCLCMEV*FCFQRT
Trigger: GGTCCTTTGAAAACAAAACAAAACTTCCATACACAG...ACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAGGGGATGGCCCATTAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACCTACCGTTCTCTAAGTaGTGTGCTATACCTAGCCTG +
Preference number: 5 (lower is better)
Translates to: ITIASSELALVQANSKTHLPFSK*CAIPSL
Trigger: CAGGCTAGGTATAGCACACAACTTAGAGAACGGTAG...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGGTCAAGAATATCACATaGAGAACCACACAGAACATT +
Preference number: 5 (lower is better)
Translates to: LLDCLHGITVSKPLTWQWVKNIT*RTTQNI
Trigger: AATGTTCTGTGTGGTTCTCAATGTGATATTCTTGAC...CCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS TCA 90 bp AAACTGATTCTTCAGGAAACTATAGGTTCAAGGTACTCTTCTATATaGCCAACCATAAGTCTCAGAATTCGTGTGGCTTGCGGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: KLILQETIGSRYSSI*PTISLRIRVACGGS
Trigger: GGAGCCGCCGCAAGCCACACGAATTCTGAGACTTATGGTTGGTCATATAGAAGAGTACCTTGAACCTATAGTTTCCTGAAGAATCAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435527.6
CDS GCA 90 bp ACCTTGAGAAAATCTTATCTGCCTGTCCTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTTTTGTGGCATACTAGATGGAATCTG +
Preference number: 5 (lower is better)
Translates to: TLRKSYLPVLSECSY*STLGAVLWHTRWNL
Trigger: CAGATTCCATCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGACAGGCAGATAAGATTTTCTCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACTGGCCTATGTGTGCGTaGTATAGTTCCTTCAAAACC +
Preference number: 5 (lower is better)
Translates to: ITIASSELALVQANSKTHWPMCA*YSSFKT
Trigger: GGTTTTGAAGGAACTATACAACGCACACATAGGCCA...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATGGCCTATGTGTGCGTaGTATAGTTCCTTCAAAACC +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQWPMCA*YSSFKT
Trigger: GGTTTTGAAGGAACTATACAACGCACACATAGGCCA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAGTGGTAAGTGCTCATGACATTTaGCCAAATTTTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: TGLSSWHHCKQTPDMAVVSAHDI*PNFLGH
Trigger: ATGACCTAGAAAATTTGGCAAAATGTCATGAGCACT...TACCACTGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATGGATCTTGGTTGGTGTaGAGGAAGGGTCTGAGACGG +
Preference number: 5 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHGSWLV*RKGLRR
Trigger: CCGTCTCAGACCCTTCCTCAACACCAACCAAGATCC...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTATCATGCGTGTCCGTaGTTCCAATTGGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSYHACP*FQLVFQ
Trigger: CTGAAAGACCAATTGGAACAACGGACACGCATGATA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCAACTCTGGGTGCTGTTTaGTGGCATACTAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPTLGAV*WHTRWN
Trigger: ATTCCATCTAGTATGCCACAAAACAGCACCCAGAGT...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACACAAGTTGTTGACCTaGAGAAAATCTTATCTGCCT +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAHKLLT*RKSYLP
Trigger: AGGCAGATAAGATTTTCTCAAGGTCAACAACTTGTG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ACTGGCTATGCCCCTATGATCACCTCCTGCTGGCTGGTATTTAATGTACATCTGTTTGATTTATTACACTaGTCCTCTCCTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: TGYAPMITSCWLVFNVHLFDLLH*SSPPFP
Trigger: AGGAAAGGGAGGAGAGGACAAGTGTAATAAATCAAA...CAGATGTACATTAAATACCAGCCAGCAGGAGGTGATCATAGGGGCATAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS TCA 90 bp GTAGAATTATCCAAAGGCATCTTACAATGTGATAGAATCAGCTTCTaGGCTCCAGCAGCTTTGCAGGAACAAGTAAAAATTCGGGAGCGC +
Preference number: 5 (lower is better)
Translates to: VELSKGILQCDRISF*APAALQEQVKIRER
Trigger: GCGCTCCCGAATTTTTACTTGTTCCTGCAAAGCTGCTGGAGCTCAGAAGCTGATTCTATCACATTGTAAGATGCCTTTGGATAATTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGATACTCTTTTCGCTTaGTCCTTGTCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSDTLFA*SLSSSS
Trigger: GGAAGAAGATGACAAGGACAAAGCGAAAAGAGTATC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCGATGTAAACTCTTCATaGGGTTCTTCAACAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSDVNSS*GSSTVH
Trigger: GTGCACTGTTGAAGAACCCAATGAAGAGTTTACATC...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCAAGTGCTCATGACATTTaGCCAAATTTTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMASAHDI*PNFLGH
Trigger: ATGACCTAGAAAATTTGGCAAAATGTCATGAGCACT...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCATGTGAGATGATTTTCTaGAACTCCGAGAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LPFKNSNQLVLARKTHSACEMIF*NSEKRQ
Trigger: CTGCCTCTTCTCGGAGTTCAAGAAAATCATCTCACA...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTGTCCGTTGTTCCAATaGGTCTTTCAGATGTTGCAT +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSCPLFQ*VFQMLH
Trigger: ATGCAACATCTGAAAGACCAATTGGAACAACGGACA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAACAGGATGGATCAGTTaGCACATGGTGTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQTGWIS*HMVSEF
Trigger: AAATTCTGACACCATGTGCAAACTGATCCATCCTGT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTAGTTACCCCCGGAATTaGGGATGCTCGAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCSYPRN*GCSKAR
Trigger: TCTAGCCTTCGAGCATCCCAAATTCCGGGGGTAACT...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGAGTTACCCCCGGAATTaGGGATGCTCGAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLSYPRN*GCSKAR
Trigger: TCTAGCCTTCGAGCATCCCAAATTCCGGGGGTAACT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCAAAATTCCAATCAGCTaGTCCTGGCTAGAAAGACTC +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSKIPIS*SWLERL
Trigger: GAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp AAGTCTACTGGACTGTCTTCATGGCATCACTGTAAGCAAACCCCTGACATGGCACCTAATATAGCACCGTaGAAACCATTCATTATCCTT +
Preference number: 5 (lower is better)
Translates to: KSTGLSSWHHCKQTPDMAPNIAP*KPFIIL
Trigger: AAGGATAATGAATGGTTTCAACGGTGCTATATTAGG...TGCCATGTCAGGGGTTTGCTTACAGTGATGCCATGAAGACAGTCCAGTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGTTCCTTCAAAACCATaGTGTGCTGAAGAGGATACA +
Preference number: 5 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAVPSKP*CAEEDT
Trigger: TGTATCCTCTTCAGCACACAATGGTTTTGAAGGAAC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACTTTCCAATGCTTCCTaGAGACTGACTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQLSNAS*RLTVFI
Trigger: TATAAACACAGTCAGTCTCAAGGAAGCATTGGAAAG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCCTTTCCAATGCTTCCTaGAGACTGACTGTGTTTATA +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSLSNAS*RLTVFI
Trigger: TATAAACACAGTCAGTCTCAAGGAAGCATTGGAAAG...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCCTGTACATAGAGAATTaGAACCCACACAACATTCTG +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSLYIEN*NPHNIL
Trigger: CAGAATGTTGTGTGGGTTCAAATTCTCTATGTACAG...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAATTTTCCCCCGACTATTaGTGGAGATGGGAAATAATT +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQFSPDY*WRWEII
Trigger: AATTATTTCCCATCTCCACAAATAGTCGGGGGAAAA...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGGGGGCGGGATAGCTTaGCAACCCAAATTTAAGAGA +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCGGGIA*QPKFKR
Trigger: TCTCTTAAATTTGGGTTGCAAAGCTATCCCGCCCCC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAAAAACCACAATCTGATTaGATCTTTCATCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQKPQSD*IFHLPG
Trigger: ACCTGGCAGATGAAAGATCAAATCAGATTGTGGTTT...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS TCA 90 bp GTAGAATTATCCAAAGGCATCTTACAATGTGATAGAATCAGCTTCTaGGCTCCAGCAGCTTTGCAGGAACAAGTAAAAATTCGTGTGGCT +
Preference number: 5 (lower is better)
Translates to: VELSKGILQCDRISF*APAALQEQVKIRVA
Trigger: AGCCACACGAATTTTTACTTGTTCCTGCAAAGCTGCTGGAGCTCAGAAGCTGATTCTATCACATTGTAAGATGCCTTTGGATAATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509151.5
ENST00000513033.1
CDS-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATGCAGAACAGTAGATTaGTCCATCTTTCTAGCATTA +
Preference number: 5 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPCRTVD*SIFLAL
Trigger: TAATGCTAGAAAGATGGACAAATCTACTGTTCTGCA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTGCAGAACAGTAGATTaGTCCATCTTTCTAGCATTA +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSCRTVD*SIFLAL
Trigger: TAATGCTAGAAAGATGGACAAATCTACTGTTCTGCA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAGTATTCATTCCACTTaGAATCTGGTTAGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: ITIASSELALVQANSKTHSIHST*NLVSRN
Trigger: GTTCCTACTAACCAGATTCAAAGTGGAATGAATACT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCTTTGTTGACTCTGAGTaGATGTACTCTGTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSFVDSE*MYSVKS
Trigger: AGACTTTACAGAGTACATCAACTCAGAGTCAACAAA...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCATTTGTTGACTCTGAGTaGATGTACTCTGTAAAGTCT +
Preference number: 5 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPFVDSE*MYSVKS
Trigger: AGACTTTACAGAGTACATCAACTCAGAGTCAACAAA...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GCTGGCTGGTATTTAATGTACATCTGTAGCACTAGGCAGCATTTTCTCTGCCAACCACTTTTAAAAAGTTaGCCTCAATGTAGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: AGWYLMYICSTRQHFLCQPLLKS*PQCSGN
Trigger: GTTTCCACTACATTGAGGCAAACTTTTTAAAAGTGG...TTGGCAGAGAAAATGCTGCCTAGTGCTACAGATGTACATTAAATACCAGCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCCCACTTTTAAAAAGTTaGCCTCAATGTAGTGGAAAC +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSPLLKS*PQCSGN
Trigger: GTTTCCACTACATTGAGGCAAACTTTTTAAAAGTGG...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGACACCGAAATCACTTaGATGAGAAAACAGAACACA +
Preference number: 5 (lower is better)
Translates to: LPFKNSNQLVLARKTHSADTEIT*MRKQNT
Trigger: TGTGTTCTGTTTTCTCATCAAAGTGATTTCGGTGTC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp GGGCTTGTCTTATGCTTTGTTGCTGTCAACCTAAGTAGTACTCACAGTTCACCACTGTGTATGGAAGTTTaGTTTTGTTTTCAAAGGACC +
Preference number: 5 (lower is better)
Translates to: GLVLCFVAVNLSSTHSSPLCMEV*FCFQRT
Trigger: GGTCCTTTGAAAACAAAACAAAACTTCCATACACAG...TGGTGAACTGTGAGTACTACTTAGGTTGACAGCAACAAAGCATAAGACAAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAGAACACTCAATACTGCATCTCATGAAACTGCTGGAACTTTCCCTCCTTTCCAGCAGGTGTTATTTTTaGAGAAATGCAGGTGATAAC +
Preference number: 5 (lower is better)
Translates to: LEHSILHLMKLLELSLLSSRCYF*RNAGDN
Trigger: GTTATCACCTGCATTTCTCAAAAAATAACACCTGCT...GGAAAGGAGGGAAAGTTCCAGCAGTTTCATGAGATGCAGTATTGAGTGTTCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATAACCATTGCCAGCAGTGAACTTGCACTAGTCCAAGCCAACTCAAAAACACACAGCAGGTGTTATTTTTaGAGAAATGCAGGTGATAAC +
Preference number: 5 (lower is better)
Translates to: ITIASSELALVQANSKTHSRCYF*RNAGDN
Trigger: GTTATCACCTGCATTTCTCAAAAAATAACACCTGCT...GTGTGTTTTTGAGTTGGCTTGGACTAGTGCAAGTTCACTGCTGGCAATGGTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS GCA 90 bp TTTTTCTTAGTTCTTCTTGTTGCCGATGAATATTTGCTTCTATCATaGGTGTCCGTTGTTCCAATTGGTCTTTCAGATGTTGCATGGCTC +
Preference number: 5 (lower is better)
Translates to: FFLVLLVADEYLLLS*VSVVPIGLSDVAWL
Trigger: GAGCCATGCAACATCTGAAAGACCAATTGGAACAACGGACACGCATGATAGAAGCAAATATTCATCGGCAACAAGAAGAACTAAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGTATCATGCGTGTCCGTaGTTCCAATTGGTCTTTCAG +
Preference number: 5 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLYHACP*FQLVFQ
Trigger: CTGAAAGACCAATTGGAACAACGGACACGCATGATA...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGACTCTGGGTGCTGTTTaGTGGCATACTAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLTLGAV*WHTRWN
Trigger: ATTCCATCTAGTATGCCACAAAACAGCACCCAGAGT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTACCATTCAAAAATTCCAATCAGCTTGTCCTGGCTAGAAAGACTCACTCAGCAGTCAAGAATATCACATaGAGAACCACACAGAACATT +
Preference number: 5 (lower is better)
Translates to: LPFKNSNQLVLARKTHSAVKNIT*RTTQNI
Trigger: AATGTTCTGTGTGGTTCTCAATGTGATATTCTTGAC...TGCTGAGTGAGTCTTTCTAGCCAGGACAAGCTGATTGGAATTTTTGAATGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS TCA 90 bp AACTTGGCCTTGCATATTTATAGGTGCAAGTTGCTGGATATTAGATaGATTTCCAGAAGAAAGTTGAACGGAACCAAAATTCAACCCAGG +
Preference number: 5 (lower is better)
Translates to: NLALHIYRCKLLDIR*ISRRKLNGTKIQPR
Trigger: CCTGGGTTGAATTTTGGTTCCGTTCAACTTTCTTCTGGAAATTCATCTAATATCCAGCAACTTGCACCTATAAATATGCAAGGCCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATAGGAACAACTTGGCCTaGCATATTTATAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHRNNLA*HIYRCK
Trigger: CTTGCACCTATAAATATGCAAGGCCAAGTTGTTCCT...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGAGGAACAACTTGGCCTaGCATATTTATAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLRNNLA*HIYRCK
Trigger: CTTGCACCTATAAATATGCAAGGCCAAGTTGTTCCT...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTGGCATCTACAATCTCTaGACTCCACCACATTCAAAA +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCGIYNL*TPPHSK
Trigger: TTTTGAATGTGGTGGAGTCAAGAGATTGTAGATGCC...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp TTTGGGATTTTAACTAACAGCTTTGGCTATAGAAATGAAGAACAGACACTGCTGCTGTACATAGAGAATTaGAACCCACACAACATTCTG +
Preference number: 5 (lower is better)
Translates to: FGILTNSFGYRNEEQTLLLYIEN*NPHNIL
Trigger: CAGAATGTTGTGTGGGTTCAAATTCTCTATGTACAG...CAGCAGTGTCTGTTCTTCATTTCTATAGCCAAAGCTGTTAGTTAAAATCCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATTTTGATTTATTACACTaGTCCTCTCCTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHFDLLH*SSPPFP
Trigger: AGGAAAGGGAGGAGAGGACAAGTGTAATAAATCAAA...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTTTTCCCCCGACTATTaGTGGAGATGGGAAATAATT +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCFSPDY*WRWEII
Trigger: AATTATTTCCCATCTCCACAAATAGTCGGGGGAAAA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTTTTAGCTCCACCGTTTaGGAAGTAAAAATGATGAGC +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCFSSTV*EVKMMS
Trigger: GCTCATCATTTTTACTTCCAAAACGGTGGAGCTAAA...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS TCA 90 bp ATAGGTGCAAGTTGCTGGATATTAGATGAATTTCCAGAAGAAAGTTaGACGGAACCAAAATTCAACCCAGGATTTGATTGTTGCAAAAAC +
Preference number: 5 (lower is better)
Translates to: IGASCWILDEFPEES*TEPKFNPGFDCCKN
Trigger: GTTTTTGCAACAATCAAATCCTGGGTTGAATTTTGGTTCCGTTCAACTTTCTTCTGGAAATTCATCTAATATCCAGCAACTTGCACCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS-3UTR CAA 90 bp CTAAAAGTTACTAACATCATTAGTGCCTTTCTGATTCCCTGGAGGTCATTTCATAGTGCTCATGACATTTaGCCAAATTTTCTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: LKVTNIISAFLIPWRSFHSAHDI*PNFLGH
Trigger: ATGACCTAGAAAATTTGGCAAAATGTCATGAGCACT...ATGAAATGACCTCCAGGGAATCAGAAAGGCACTAATGATGTTAGTAACTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS-3UTR CAA 90 bp ATCAGAGAACCTAATATAGCACCGTTGAAACCATTCATTATCCTTCATGTGTGTCCTAATATAGCACCGTaGAAACCATTCATTATCCTT +
Preference number: 5 (lower is better)
Translates to: IREPNIAPLKPFIILHVCPNIAP*KPFIIL
Trigger: AAGGATAATGAATGGTTTCAACGGTGCTATATTAGG...ACACACATGAAGGATAATGAATGGTTTCAACGGTGCTATATTAGGTTCTCTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309964.8
ENST00000513440.6
CDS CCA 72 bp ACGCCAGCGGCGGTGACGGGGAACGGGAAGCGCGGGTaGACGGAAGAAGAGAAACCGAGCGCCTCGCCGCCA +
Preference number: 6 (lower is better)
Translates to: TPAAVTGNGKRG*TEEEKPSASPP
Trigger: TGGCGGCGAGGCGCTCGGTTTCTCTTCTTCCGTCCACCCGCGCTTCCCGTTCCCCGTCACCGCCGCTGGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS TCA 72 bp GCTTCTTCCCTCCCCCACCCAGGTCTCCCGCTGCGGTaGCTCGGAACCACTACCCCGCCTGTGTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: ASSLPHPGLPLR*LGTTTPPVSRR
Trigger: CCTCCTGGACACAGGCGGGGTAGTGGTTCCGAGTCACCGCAGCGGGAGACCTGGGTGGGGGAGGGAAGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509151.5
ENST00000513033.1
CDS GCA 72 bp CTCCGGCTTCTTCCCTCCCCCACCCAGGTCTCCCGCTaGGGTGACTCGGAACCACTACCCCGCCTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: LRLLPSPTQVSR*GDSEPLPRLCP
Trigger: TGGACACAGGCGGGGTAGTGGTTCCGAGTCACCGCAGCGGGAGACCTGGGTGGGGGAGGGAAGAAGCCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509151.5
ENST00000513033.1
CDS TCA 72 bp CACTGGCGGAAAGAAATCTACAAACGCCAGCGGCGGTaGCGGGGAACGGGAAGCGCGGGTGGACGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: HWRKEIYKRQRR*RGTGSAGGRKK
Trigger: CTTCTTCCGTCCACCCGCGCTTCCCGTTCCCCGTCACCGCCGCTGGCGTTTGTAGATTTCTTTCCGCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS CCA 72 bp GCTGCCTGGGTGGAGTGCTCGTATCCGTCGGGATCTTaGTTGGTGTTGAGGAAGGGTCTGAGACGGCCGTGT +
Preference number: 6 (lower is better)
Translates to: AAWVECSYPSGS*LVLRKGLRRPC
Trigger: ACACGGCCGTCTCAGACCCTTCCTCAACACCAACCAAGATCCCGACGGATACGAGCACTCCACCCAGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CAA 72 bp TGCTGCCTGGGTGGAGTGCTCGTATCCGTCGGGATCTaGGTTGGTGTTGAGGAAGGGTCTGAGACGGCCGTG +
Preference number: 6 (lower is better)
Translates to: CCLGGVLVSVGI*VGVEEGSETAV
Trigger: CACGGCCGTCTCAGACCCTTCCTCAACACCAACCAAGATCCCGACGGATACGAGCACTCCACCCAGGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS TCA 72 bp GGGTCAGCTGAGCCTGAGATGGTTGCTGAACTGAAGTaGGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: GSAEPEMVAELK*AAAPGSSAAAA
Trigger: AGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGTTCAGCAACCATCTCAGGCTCAGCTGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CCA 72 bp AAGAGAGGAAGCACGTGTGCTACTGTGGTTGAACCTTaGAAGGGTCGGGCAAGCTGTCAGTCCTGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: KRGSTCATVVEP*KGRASCQSCAG
Trigger: GCCGGCACAGGACTGACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGTAGCACACGTGCTTCCTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CAA 72 bp AGGGTCGGGCAAGCTGTCAGTCCTGTGCCGGCTGAGTaGCTGCTGTTGCTGAGACTGATGTTGCTGGTGATG +
Preference number: 6 (lower is better)
Translates to: RVGQAVSPVPAE*LLLLRLMLLVM
Trigger: CATCACCAGCAACATCAGTCTCAGCAACAGCAGCAACTCAGCCGGCACAGGACTGACAGCTTGCCCGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CAA 90 bp CTTCCTCCCTTGATGTCAAGAGAGGAAGCACGTGTGCTACTGTGGTaGAACCTTGGAAGGGTCGGGCAAGCTGTCAGTCCTGTGCCGGCT +
Preference number: 6 (lower is better)
Translates to: LPPLMSREEARVLLW*NLGRVGQAVSPVPA
Trigger: AGCCGGCACAGGACTGACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGTAGCACACGTGCTTCCTCTCTTGACATCAAGGGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS GCA 72 bp GAAGTGAGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTaGTGCTGCGTTACTGACAATGTCTGTGACTGTTGC +
Preference number: 6 (lower is better)
Translates to: EVSCCSWELCCC*CCVTDNVCDCC
Trigger: GCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS GCA 72 bp AGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCTGCTaGGTTACTGACAATGTCTGTGACTGTTGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: SCCSWELCCCCC*VTDNVCDCCCC
Trigger: ACAACAGCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS GCA 72 bp ACTGAAGTGAGCTGCTGCTCCTGGGAGCTCTGCTGCTaGTGCTGCTGCGTTACTGACAATGTCTGTGACTGT +
Preference number: 6 (lower is better)
Translates to: TEVSCCSWELCC*CCCVTDNVCDC
Trigger: ACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCACTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS GCA 72 bp GTGAGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCTaGTGCGTTACTGACAATGTCTGTGACTGTTGCTTA +
Preference number: 6 (lower is better)
Translates to: VSCCSWELCCCC*CVTDNVCDCCL
Trigger: TAAGCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511124.1
CDS GCA 72 bp TCTTCTCATGAGCTGGTAAATGCTGCCTGGGTGGAGTaGTCGTATCCGTCGGGATCTTGGTTGGTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SSHELVNAAWVE*SYPSGSWLVLR
Trigger: CCTCAACACCAACCAAGATCCCGACGGATACGAGCACTCCACCCAGGCAGCATTTACCAGCTCATGAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS GCA 72 bp AGCTGCTGCTCCTGGGAGCTCTGCTGCTGCTGCTGCTaGGTTACTGACAATGTCTGTGACTGTTGCTTATCT +
Preference number: 6 (lower is better)
Translates to: SCCSWELCCCCC*VTDNVCDCCLS
Trigger: AGATAAGCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCAGCAGCAGAGCTCCCAGGAGCAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511124.1
CDS CCA 72 bp CCCTTGATGTCAAGAGAGGAAGCACGTGTGCTACTGTaGTTGAACCTTGGAAGGGTCGGGCAAGCTGTCAGT +
Preference number: 6 (lower is better)
Translates to: PLMSREEARVLL*LNLGRVGQAVS
Trigger: ACTGACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGTAGCACACGTGCTTCCTCTCTTGACATCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CAA 72 bp AGGAAGGGTCTGAGACGGCCGTGTGAGATGATTTTCTaGAACTCCGAGAAGAGGCAGAAGGGGTTGGGCTGT +
Preference number: 6 (lower is better)
Translates to: RKGLRRPCEMIF*NSEKRQKGLGC
Trigger: ACAGCCCAACCCCTTCTGCCTCTTCTCGGAGTTCAAGAAAATCATCTCACACGGCCGTCTCAGACCCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CCA 72 bp TTTGCACCATCTTCTCATGAGCTGGTAAATGCTGCCTaGGTGGAGTGCTCGTATCCGTCGGGATCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: FAPSSHELVNAA*VECSYPSGSWL
Trigger: CAACCAAGATCCCGACGGATACGAGCACTCCACCCAGGCAGCATTTACCAGCTCATGAGAAGATGGTGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CAA 72 bp TTGATGTCAAGAGAGGAAGCACGTGTGCTACTGTGGTaGAACCTTGGAAGGGTCGGGCAAGCTGTCAGTCCT +
Preference number: 6 (lower is better)
Translates to: LMSREEARVLLW*NLGRVGQAVSP
Trigger: AGGACTGACAGCTTGCCCGACCCTTCCAAGGTTCAACCACAGTAGCACACGTGCTTCCTCTCTTGACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CAA 90 bp TTGGTGTTGAGGAAGGGTCTGAGACGGCCGTGTGAGATGATTTTCTaGAACTCCGAGAAGAGGCAGAAGGGGTTGGGCTGTGATCAAACC +
Preference number: 6 (lower is better)
Translates to: LVLRKGLRRPCEMIF*NSEKRQKGLGCDQT
Trigger: GGTTTGATCACAGCCCAACCCCTTCTGCCTCTTCTCGGAGTTCAAGAAAATCATCTCACACGGCCGTCTCAGACCCTTCCTCAACACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CAA 90 bp CCTGTCCTGAGTGAATGTAGTTACTGCAGCACTCTGGGTGCTGTTTaGTGGCATACTAGATGGAATCTGGACCATGCTTCCGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PVLSECSYCSTLGAV*WHTRWNLDHASGCR
Trigger: CCTGCAGCCGGAAGCATGGTCCAGATTCCATCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000479384.1
ENST00000511124.1
ENST00000513440.6
CDS TCA 72 bp TTGGTTGGTGTTGAGGAAGGGTCTGAGACGGCCGTGTaGGATGATTTTCTTGAACTCCGAGAAGAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: LVGVEEGSETAV*DDFLELREEAE
Trigger: TTCTGCCTCTTCTCGGAGTTCAAGAAAATCATCTCACACGGCCGTCTCAGACCCTTCCTCAACACCAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS TCA 72 bp CTAGATGGAATCTGGACCATGCTTCCGGCTGCAGGCTaGGAAATCACCATAGTGTTATACAGTGGGGCTGTA +
Preference number: 6 (lower is better)
Translates to: LDGIWTMLPAAG*EITIVLYSGAV
Trigger: TACAGCCCCACTGTATAACACTATGGTGATTTCTCAGCCTGCAGCCGGAAGCATGGTCCAGATTCCATCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000479384.1
ENST00000511124.1
ENST00000513440.6
CDS CCA 72 bp GAATGTAGTTACTGCAGCACTCTGGGTGCTGTTTTGTaGCATACTAGATGGAATCTGGACCATGCTTCCGGC +
Preference number: 6 (lower is better)
Translates to: ECSYCSTLGAVL*HTRWNLDHASG
Trigger: GCCGGAAGCATGGTCCAGATTCCATCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000479384.1
ENST00000511124.1
ENST00000513440.6
CDS TCA 72 bp CTACTAAATGATGACCTTCTTTGCACCATCTTCTCATaGGCTGGTAAATGCTGCCTGGGTGGAGTGCTCGTA +
Preference number: 6 (lower is better)
Translates to: LLNDDLLCTIFS*AGKCCLGGVLV
Trigger: TACGAGCACTCCACCCAGGCAGCATTTACCAGCTCATGAGAAGATGGTGCAAAGAAGGTCATCATTTAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS GCA 72 bp TGCTGCTGCTGCGTTACTGACAATGTCTGTGACTGTTaGTGTTGTGTAGCAAAAGTAGGATATGCAGTCACC +
Preference number: 6 (lower is better)
Translates to: CCCCVTDNVCDC*CCVAKVGYAVT
Trigger: GGTGACTGCATATCCTACTTTTGCTACACAACAGCAACAGTCACAGACATTGTCAGTAACGCAGCAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS GCA 72 bp CTACCTTATCTGCCTGTCCTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTTTTGTGGCATACTAGA +
Preference number: 6 (lower is better)
Translates to: LPYLPVLSECSY*STLGAVLWHTR
Trigger: TCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGACAGGCAGATAAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479384.1
CDS GCA 72 bp GTTGCTTATCTGCCTGTCCTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTTTTGTGGCATACTAGA +
Preference number: 6 (lower is better)
Translates to: VAYLPVLSECSY*STLGAVLWHTR
Trigger: TCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGACAGGCAGATAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511124.1
CDS CCA 72 bp TGTTGTGTAGCAAAAGTAGGATATGCAGTCACCACCTaGCCCATAAGCATAGTACTAGGTACCATGACTGCC +
Preference number: 6 (lower is better)
Translates to: CCVAKVGYAVTT*PISIVLGTMTA
Trigger: GGCAGTCATGGTACCTAGTACTATGCTTATGGGCCAGGTGGTGACTGCATATCCTACTTTTGCTACACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CAA 72 bp AGTGAATGTAGTTACTGCAGCACTCTGGGTGCTGTTTaGTGGCATACTAGATGGAATCTGGACCATGCTTCC +
Preference number: 6 (lower is better)
Translates to: SECSYCSTLGAV*WHTRWNLDHAS
Trigger: GGAAGCATGGTCCAGATTCCATCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000479384.1
ENST00000511124.1
ENST00000513440.6
CDS GCA 72 bp CTTTCATCTGCCAGGTCAGAGACTAGGCTTTTATCTTaGAGAATTAGGCTCACCTACCATCAACAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: LSSARSETRLLS*RIRLTYHQQED
Trigger: GTCCTCTTGTTGATGGTAGGTGAGCCTAATTCTGCAAGATAAAAGCCTAGTCTCTGACCTGGCAGATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS TCA 72 bp TGCTTCCTTGAGACTGACTGTGTTTATACGATTATCTaGCCCAGAATCTTGGCTTTTGTCAGCAGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: CFLETDCVYTII*PRILAFVSSCL
Trigger: GAGACAGCTGCTGACAAAAGCCAAGATTCTGGGTCAGATAATCGTATAAACACAGTCAGTCTCAAGGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS TCA 72 bp CTTCAGGAAACTATAGGTTCAAGGTACTCTTCTATATaGCCAACCATAAGTCTCAGAATTCGGGAGCGCTCG +
Preference number: 6 (lower is better)
Translates to: LQETIGSRYSSI*PTISLRIRERS
Trigger: CGAGCGCTCCCGAATTCTGAGACTTATGGTTGGTCATATAGAAGAGTACCTTGAACCTATAGTTTCCTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506923.5
CDS GCA 72 bp AAATCTTATCTGCCTGTCCTGAGTGAATGTAGTTACTaGAGCACTCTGGGTGCTGTTTTGTGGCATACTAGA +
Preference number: 6 (lower is better)
Translates to: KSYLPVLSECSY*STLGAVLWHTR
Trigger: TCTAGTATGCCACAAAACAGCACCCAGAGTGCTGCAGTAACTACATTCACTCAGGACAGGCAGATAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000513440.6
CDS CCA 72 bp GTGTCCGTTGTTCCAATTGGTCTTTCAGATGTTGCATaGCTCCTAATTGAGCTGAAAACTGAAACTGGGACA +
Preference number: 6 (lower is better)
Translates to: VSVVPIGLSDVA*LLIELKTETGT
Trigger: TGTCCCAGTTTCAGTTTTCAGCTCAATTAGGAGCCATGCAACATCTGAAAGACCAATTGGAACAACGGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CAA 72 bp TTGCCGATGAATATTTGCTTCTATCATGCGTGTCCGTaGTTCCAATTGGTCTTTCAGATGTTGCATGGCTCC +
Preference number: 6 (lower is better)
Translates to: LPMNICFYHACP*FQLVFQMLHGS
Trigger: GGAGCCATGCAACATCTGAAAGACCAATTGGAACAACGGACACGCATGATAGAAGCAAATATTCATCGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS TCA 72 bp CTGTCTTCTTGTGATCATTATTCATCATCATCCTGGTaGTTCCCTGGGTCTCTAGTTAGGTCATATTCCCTG +
Preference number: 6 (lower is better)
Translates to: LSSCDHYSSSSW*FPGSLVRSYSL
Trigger: CAGGGAATATGACCTAACTAGAGACCCAGGGAATCACCAGGATGATGATGAATAATGATCACAAGAAGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381322.5
ENST00000506923.5
ENST00000513033.1
CDS TCA 72 bp TGGGACATGCCTTGTGGAATTGGTAAATTTGTAGCTTaGGACATCACTGGCTGTGTTAATGATGAACCAACA +
Preference number: 6 (lower is better)
Translates to: WDMPCGIGKFVA*DITGCVNDEPT
Trigger: TGTTGGTTCATCATTAACACAGCCAGTGATGTCTCAAGCTACAAATTTACCAATTCCACAAGGCATGTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS TCA 72 bp CTTCAGGAAACTATAGGTTCAAGGTACTCTTCTATATaGCCAACCATAAGTCTCAGAATTCGTGTGGCTTGC +
Preference number: 6 (lower is better)
Translates to: LQETIGSRYSSI*PTISLRIRVAC
Trigger: GCAAGCCACACGAATTCTGAGACTTATGGTTGGTCATATAGAAGAGTACCTTGAACCTATAGTTTCCTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435527.6
CDS CAA 90 bp AGTCTAATAGCACGGCATTCTAATAGCAGGAAACCACAATCTGATTaGATCTTTCATCTGCCAGGTCAGAGACTAGGCTTTTATCTTGCA +
Preference number: 6 (lower is better)
Translates to: SLIARHSNSRKPQSD*IFHLPGQRLGFYLA
Trigger: TGCAAGATAAAAGCCTAGTCTCTGACCTGGCAGATGAAAGATCAAATCAGATTGTGGTTTCCTGCTATTAGAATGCCGTGCTATTAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381322.5
CDS GCA 72 bp GTTCTTCTTGTTGCCGATGAATATTTGCTTCTATCATaGGTGTCCGTTGTTCCAATTGGTCTTTCAGATGTT +
Preference number: 6 (lower is better)
Translates to: VLLVADEYLLLS*VSVVPIGLSDV
Trigger: AACATCTGAAAGACCAATTGGAACAACGGACACGCATGATAGAAGCAAATATTCATCGGCAACAAGAAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CCA 72 bp GACAGTAGCTACAAAACAAACTCTATCTTCATAAGATaGCCTATGTGTGCGTTGTATAGTTCCTTCAAAACC +
Preference number: 6 (lower is better)
Translates to: DSSYKTNSIFIR*PMCALYSSFKT
Trigger: GGTTTTGAAGGAACTATACAACGCACACATAGGCCATCTTATGAAGATAGAGTTTGTTTTGTAGCTACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000506747.5
ENST00000513440.6
CDS CAA 72 bp ATTCATTCCACTTTGAATCTGGTTAGTAGGAACAACTaGGCCTTGCATATTTATAGGTGCAAGTTGCTGGAT +
Preference number: 6 (lower is better)
Translates to: IHSTLNLVSRNN*ALHIYRCKLLD
Trigger: ATCCAGCAACTTGCACCTATAAATATGCAAGGCCAAGTTGTTCCTACTAACCAGATTCAAAGTGGAATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS CAA 72 bp GAATTTTTCTTAGTTCTTCTTGTTGCCGATGAATATTaGCTTCTATCATGCGTGTCCGTTGTTCCAATTGGT +
Preference number: 6 (lower is better)
Translates to: EFFLVLLVADEY*LLSCVSVVPIG
Trigger: ACCAATTGGAACAACGGACACGCATGATAGAAGCAAATATTCATCGGCAACAAGAAGAACTAAGAAAAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6
CDS TCA 72 bp AGTTGCTGGATATTAGATGAATTTCCAGAAGAAAGTTaGACGGAACCAAAATTCAACCCAGGATTTGATTGT +
Preference number: 6 (lower is better)
Translates to: SCWILDEFPEES*TEPKFNPGFDC
Trigger: ACAATCAAATCCTGGGTTGAATTTTGGTTCCGTTCAACTTTCTTCTGGAAATTCATCTAATATCCAGCAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309964.8
ENST00000381322.5
ENST00000511124.1
ENST00000513440.6