Pregenerated sensors for CLNS1A (Homo sapiens)
Ensembl gene IDs: ENSG00000074201Ensembl transcript IDs: ENST00000525428.6, ENST00000526009.5, ENST00000526761.5, ENST00000527133.2, ENST00000527265.1, ENST00000528364.1, ENST00000533957.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATGAGGAAATAAGCCCAGAGAGGTGCCCACATGCTTTGGTCTCCTaGCTTTTTGCATATTGCATTGACCACAGCAACACCAACAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: NEEISPERCPHALVS*LFAYCIDHSNTNKK Trigger: TTTCTTGTTGGTGTTGCTGTGGTCAATGCAATATGCAAAAAGGCAGGAGACCAAAGCATGTGGGCACCTCTCTGGGCTTATTTCCTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR TCA 90 bp | GGAGAGTGTGCATGCTTTCTGCTGCTGGTAGGTGGTAAGGCTGTATaGTGTTTTAAAGCACAGGCTCAAAAATCACAATTCACTATCTAC | + |
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Preference number: 1 (lower is better) Translates to: GECACFLLLVGGKAV*CFKAQAQKSQFTIY Trigger: GTAGATAGTGAATTGTGATTTTTGAGCCTGTGCTTTAAAACATCATACAGCCTTACCACCTACCAGCAGCAGAAAGCATGCACACTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR CCA 90 bp | AAGAATGGACAAACTTCTAGGATAGAATTATGGGTGTTGCTCAGATaGGTAGCAGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAA | + |
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Preference number: 1 (lower is better) Translates to: KNGQTSRIELWVLLR*VAEKLGKLLYWPLK Trigger: TTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCTGCTACCCATCTGAGCAACACCCATAATTCTATCCTAGAAGTTTGTCCATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR TCA 90 bp | TATTGCATTGACCACAGCAACACCAACAAGAAACCAAGTACACTCTaGATCTTCTCGACATTTTGCTATCAGAGCAATTTATGTTCATGG | + |
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Preference number: 1 (lower is better) Translates to: YCIDHSNTNKKPSTL*IFSTFCYQSNLCSW Trigger: CCATGAACATAAATTGCTCTGATAGCAAAATGTCGAGAAGATTCAGAGTGTACTTGGTTTCTTGTTGGTGTTGCTGTGGTCAATGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCTTGATTGATGTCTCATaGCTTCTGTTTCATGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: EAPFLLQDVMPFQTEPTFLIDVS*LLFHGC Trigger: ACAGCCATGAAACAGAAGTCATGAGACATCAATCAA...GAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCCTTTCCAGACTGAACCAACGTTCTTCTTACATATATTGATTGATGTCTCAACTTCTGGGGTACTGTaGGCATCTGCACAGCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MPFQTEPTFFLHILIDVSTSGVL*ASAQRQ Trigger: CTGCCGCTGTGCAGATGCTCACAGTACCCCAGAAGT...TGAGACATCAATCAATATATGTAAGAAGAACGTTGGTTCAGTCTGGAAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| 3UTR-3UTR GCA 90 bp | ATGCCTTTCCAGACTGAACCAACGTTCTTCTTACATATATTGATTGATGTCTCAGGTACTGTGAGCATCTaGACAGCGGCAGCGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: MPFQTEPTFFLHILIDVSGTVSI*TAAASF Trigger: GAAGGACGCTGCCGCTGTGCAGATGCTCACAGTACC...TGAGACATCAATCAATATATGTAAGAAGAACGTTGGTTCAGTCTGGAAAGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCGTGGCAGAAATCCCCTaGAATGTGTTAAATCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: RETGEALVLAIEMLTLKPVAEIP*NVLNLC Trigger: GCAAAGATTTAACACATTTCAGGGGATTTCTGCCAC...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAATGGGGAGAGTGTGCATaGTTTCTGCTGCTGGTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KVSLHQEHTKKTIPATLKWGECA*FLLLVG Trigger: ACCTACCAGCAGCAGAAAGCATGCACACTCTCCCCA...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAAATAAGCCCAGAGAGGTaGCCACATGCTTTGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: KVSLHQEHTKKTIPATLKISPER*PHALVS Trigger: GGAGACCAAAGCATGTGGGCACCTCTCTGGGCTTAT...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR CCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTGAAACCCTGCAGCAGTaGGGAGAGTGTGCATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSETLQQ*GECACF Trigger: AAAGCATGCACACTCTCCCCACTGCTGCAGGGTTTC...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCTTCTTACATATATTGTTTACATCTCTAGCATaGGGACTTCTGGGGTACTGT | + |
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Preference number: 2 (lower is better) Translates to: LQDVMPFQTEPTFFLHILFTSLA*GLLGYC Trigger: ACAGTACCCCAGAAGTCCTCATGCTAGAGATGTAAA...CAATATATGTAAGAAGAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| 3UTR-3UTR CCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTAAGAACTCAGGACAGTaGCTAGTACAGAGGTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSKNSGQ*LVQRSQ Trigger: CTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTT...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR TCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTGTCCTGACTGATTACTaGAGAATGGACAAACTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSVLTDY*RMDKLL Trigger: TAGAAGTTTGTCCATTCTTCAGTAATCAGTCAGGAC...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAAAGTGGCTGTTTTACTTaGCTATTGTTAACAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: KVSLHQEHTKKTIPATLKSGCFT*LLLTDS Trigger: TGAGTCTGTTAACAATAGGCAAGTAAAACAGCCACT...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR TCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTATAAGAAATTACTGCTaGTCTAAAAGGAAGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSIRNYC*SKRKWQ Trigger: CTGCCACTTCCTTTTAGATCAGCAGTAATTTCTTAT...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAATCCTCAACTATAAAGTaGGATAAAAGCGTATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KVSLHQEHTKKTIPATLKSSTIK*DKSVSH Trigger: ATGAGATACGCTTTTATCCCACTTTATAGTTGAGGA...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR CCA 72 bp | CTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTaGACTTGCCAGCCTTCAGTCACGTGGGCCAATTTC | + |
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Preference number: 3 (lower is better) Translates to: LGLQSAGLPCRF*TCQPSVTWANF Trigger: GAAATTGGCCCACGTGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| 3UTR GCA 72 bp | AACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATaGAGATTTTGGACTTGCCAGCCTTCAGTCACGTGG | + |
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Preference number: 3 (lower is better) Translates to: NSSLGLQSAGLP*RFWTCQPSVTW Trigger: CCACGTGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| 3UTR GCA 72 bp | CTTGTACTGGCCATTGAAATGTTAACACTGAAACCCTaGAGCAGTGGGGAGAGTGTGCATGCTTTCTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: LVLAIEMLTLKP*SSGESVHAFCC Trigger: GCAGCAGAAAGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR GCA 72 bp | ATAAGCCCAGAGAGGTGCCCACATGCTTTGGTCTCCTaGCTTTTTGCATATTGCATTGACCACAGCAACACC | + |
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Preference number: 3 (lower is better) Translates to: ISPERCPHALVS*LFAYCIDHSNT Trigger: GGTGTTGCTGTGGTCAATGCAATATGCAAAAAGGCAGGAGACCAAAGCATGTGGGCACCTCTCTGGGCTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR TCA 72 bp | TGCTTCCACATCATATTCTTCTCCATCGTAGTCATCTaGATCCTCATCCTCAGGATCTGGATGCAAGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: CFHIIFFSIVVI*ILILRIWMQGL Trigger: CAGGCCTTGCATCCAGATCCTGAGGATGAGGATTCAGATGACTACGATGGAGAAGAATATGATGTGGAAGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527133.2 |
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| 3UTR GCA 72 bp | ATGACCTGGAAGCCCCCTTCCTGCTTCAAGATGTCATaGCTTTCCAGACTGAACCAACGTTCTTCTTACATA | + |
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Preference number: 3 (lower is better) Translates to: MTWKPPSCFKMS*LSRLNQRSSYI Trigger: TATGTAAGAAGAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTCCAGGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| 3UTR CCA 72 bp | CAAACTTCTAGGATAGAATTATGGGTGTTGCTCAGATaGGTAGCAGAGAAACTGGGGAAGCTCTTGTACTGG | + |
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Preference number: 3 (lower is better) Translates to: QTSRIELWVLLR*VAEKLGKLLYW Trigger: CCAGTACAAGAGCTTCCCCAGTTTCTCTGCTACCCATCTGAGCAACACCCATAATTCTATCCTAGAAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR CCA 72 bp | TTACTGAAGAATGGACAAACTTCTAGGATAGAATTATaGGTGTTGCTCAGATGGGTAGCAGAGAAACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: LLKNGQTSRIEL*VLLRWVAEKLG Trigger: CCCCAGTTTCTCTGCTACCCATCTGAGCAACACCCATAATTCTATCCTAGAAGTTTGTCCATTCTTCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAAATAGAATTATGGGTGTaGCTCAGATGGGTAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: KVSLHQEHTKKTIPATLKIELWV*LRWVAE Trigger: CTCTGCTACCCATCTGAGCAACACCCATAATTCTAT...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR CCA 90 bp | CATGAGGACTTCTGGGGTACTGTGAGCATCTGCACAGCGGCAGCGTCCTTCCACCTTTTTCCTATGACCTaGAAGCCCCCTTCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HEDFWGTVSICTAAASFHLFPMT*KPPSCF Trigger: GAAGCAGGAAGGGGGCTTCCAGGTCATAGGAAAAAG...GTGGAAGGACGCTGCCGCTGTGCAGATGCTCACAGTACCCCAGAAGTCCTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR GCA 90 bp | TGGAAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTGGTACTGTGAGCATCTaGACAGCGGCAGCGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: WKPPSCFKMSCLSRLNQRGTVSI*TAAASF Trigger: GAAGGACGCTGCCGCTGTGCAGATGCTCACAGTACC...ACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR GCA 90 bp | TCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTGGACTTGCCAGCCTTCTGGGTCTCCAGTCTaGCGGCTTACCATGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: SLGLQSAGLPCRFWTCQPSGSPV*RLTMQI Trigger: AATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGA...AGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| 3UTR CAA 72 bp | TCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTaGGACTTGCCAGCCTTCAGTCACGTGGGCCAATTT | + |
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Preference number: 4 (lower is better) Translates to: SGSPVCRLTMQI*DLPAFSHVGQF Trigger: AAATTGGCCCACGTGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| CDS-3UTR TCA 90 bp | AAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCTACTTCTGGGGTACTGTaGGCATCTGCACAGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: KPPSCFKMSCLSRLNQRSTSGVL*ASAQRQ Trigger: CTGCCGCTGTGCAGATGCTCACAGTACCCCAGAAGT...AGAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCGAGCACAGCAATGCGTaGACCACACCGCCCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPEHSNA*TTPPAL Trigger: CAGGGCGGGCGGTGTGGTGCACGCATTGCTGTGCTC...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR CCA 90 bp | CATGAGGACTTCTGGGGTACTGTGAGCATCTGCACAGCGGCAGCGTCCTTCCACGGATCAGCAGAAGAGTaGCAGAGTCTGATTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: HEDFWGTVSICTAAASFHGSAEE*QSLIDL Trigger: AAGATCAATCAGACTCTGCCACTCTTCTGCTGATCC...GTGGAAGGACGCTGCCGCTGTGCAGATGCTCACAGTACCCCAGAAGTCCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR TCA 90 bp | TTCTGGGGTACTGTGAGCATCTGCACAGCGGCAGCGTCCTTCCACTGTAGAAGCTTTACATCTCTAGCATaGGGACTTCTGGGGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: FWGTVSICTAAASFHCRSFTSLA*GLLGYC Trigger: ACAGTACCCCAGAAGTCCTCATGCTAGAGATGTAAA...GCTTCTACAGTGGAAGGACGCTGCCGCTGTGCAGATGCTCACAGTACCCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR TCA 90 bp | GAAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCTCCTCCTTTTTCCTATaGCCTGGAAGCCCCCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EAPFLLQDVMPFQTEPTFSSFFL*PGSPLP Trigger: AGGAAGGGGGCTTCCAGGTCATAGGAAAAAGGAGGA...GAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR TCA 90 bp | AGAATGCAACATAAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGCCATCCCATCTCCCCTaGGCAAGAAGAAATTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RMQHKLFSGSPVCRLTMQPSHLP*ARRNSA Trigger: GGCAGAATTTCTTCTTGCTCAGGGGAGATGGGATGG...CTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTTATGTTGCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| CDS-3UTR GCA 90 bp | TGGAAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTGGAAGCCCCCTTCCTaGTTCAAGATGTCATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: WKPPSCFKMSCLSRLNQRWKPPS*FKMSCL Trigger: AAGGCATGACATCTTGAAGCAGGAAGGGGGCTTCCA...ACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR CCA 90 bp | GCCATTGAAATGTTAACACTGAAACCCTGCAGCAGTGGGGAGAGTGTGCATGCTTGGGTGTTGCTCAGATaGGTAGCAGAGAAACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: AIEMLTLKPCSSGESVHAWVLLR*VAEKLG Trigger: CCCCAGTTTCTCTGCTACCCATCTGAGCAACACCCA...AGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR TCA 90 bp | AGAATGCAACATAAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGTGCCAGCAGAACTTCTaGGGCAGCAGAATGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: RMQHKLFSGSPVCRLTMQCQQNF*GSRMQH Trigger: ATGTTGCATTCTGCTGCCTCAGAAGTTCTGCTGGCA...CTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTTATGTTGCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| CDS-3UTR TCA 90 bp | GAAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCCATGCCTTTCCAGACTaGACCAACGTTCTTCTTACA | + |
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Preference number: 4 (lower is better) Translates to: EAPFLLQDVMPFQTEPTFHAFPD*TNVLLT Trigger: TGTAAGAAGAACGTTGGTTCAGTCTGGAAAGGCATG...GAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| 3UTR CAA 72 bp | CAGAGAGGTGCCCACATGCTTTGGTCTCCTGCCTTTTaGCATATTGCATTGACCACAGCAACACCAACAAGA | + |
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Preference number: 4 (lower is better) Translates to: QRGAHMLWSPAF*HIALTTATPTR Trigger: TCTTGTTGGTGTTGCTGTGGTCAATGCAATATGCAAAAAGGCAGGAGACCAAAGCATGTGGGCACCTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR TCA 90 bp | AAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCTAAGAGTGGCAGAGTCTaGTTGATCTTGTCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KPPSCFKMSCLSRLNQRSKSGRV*LILSCS Trigger: GGAACAAGACAAGATCAATCAGACTCTGCCACTCTT...AGAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526761.5 |
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| CDS-3UTR TCA 90 bp | GCCATTGAAATGTTAACACTGAAACCCTGCAGCAGTGGGGAGAGTGTGCATGCTGGTGGTAAGGCTGTATaGTGTTTTAAAGCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: AIEMLTLKPCSSGESVHAGGKAV*CFKAQA Trigger: AGCCTGTGCTTTAAAACATCATACAGCCTTACCACC...AGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR TCA 90 bp | GCCATTGAAATGTTAACACTGAAACCCTGCAGCAGTGGGGAGAGTGTGCATGCTCCTGTGAGAATGTCCTaGCTGATTACTGAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: AIEMLTLKPCSSGESVHAPVRMS*LITEEW Trigger: CCATTCTTCAGTAATCAGTCAGGACATTCTCACAGG...AGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR GCA 90 bp | AATAAAGAACTCAGGACAGTGGCTAGTACAGAGGTCTCAGTAAATTTTAGTTTCGTTGGAGCACAGCAATaGGTGCACCACACCGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: NKELRTVASTEVSVNFSFVGAQQ*VHHTAR Trigger: GCGGGCGGTGTGGTGCACGCATTGCTGTGCTCCAAC...GAAACTAAAATTTACTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCTGGGGAGAGTGTGCATaGTTTCTGCTGCTGGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPWGECA*FLLLVG Trigger: ACCTACCAGCAGCAGAAAGCATGCACACTCTCCCCA...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR GCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCATAAGCCCAGAGAGGTaGCCACATGCTTTGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPISPER*PHALVS Trigger: GGAGACCAAAGCATGTGGGCACCTCTCTGGGCTTAT...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR GCA 90 bp | CGGCTTACCATGCAGATTTTGGACTTGCCAGCCTTCAGTCACGTGGGCCAATTTTCTGAGGCAGCAGAATaGAACATAAACTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLTMQILDLPAFSHVGQFSEAAE*NINSSL Trigger: CAGAGAAGAGTTTATGTTGCATTCTGCTGCCTCAGA...AAATTGGCCCACGTGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS-3UTR CCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCGAAACCCTGCAGCAGTaGGGAGAGTGTGCATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPETLQQ*GECACF Trigger: AAAGCATGCACACTCTCCCCACTGCTGCAGGGTTTC...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | TCCTATGACCTGGAAGCCCCCTTCCTGCTTCAAGATGTCATGCCTTTCCAGACTTTGATTGATGTCTCATaGCTTCTGTTTCATGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYDLEAPFLLQDVMPFQTLIDVS*LLFHGC Trigger: ACAGCCATGAAACAGAAGTCATGAGACATCAATCAA...AGTCTGGAAAGGCATGACATCTTGAAGCAGGAAGGGGGCTTCCAGGTCATAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526761.5 |
||
| CDS-3UTR CCA 90 bp | GACAGTGCTGAAATGAACACTGGGCTGAGTGGTACCAAACATCAGTTTAGTCACAAGAACTCAGGACAGTaGCTAGTACAGAGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSAEMNTGLSGTKHQFSHKNSGQ*LVQRSQ Trigger: CTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTT...GTGACTAAACTGATGTTTGGTACCACTCAGCCCAGTGTTCATTTCAGCACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCGCCACCACGTCCGGCTaGGACCATATCTTAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPATTSG*DHILMN Trigger: ATTCATTAAGATATGGTCCCAGCCGGACGTGGTGGC...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| 3UTR CAA 72 bp | AATGAGGAAATAAGCCCAGAGAGGTGCCCACATGCTTaGGTCTCCTGCCTTTTTGCATATTGCATTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NEEISPERCPHA*VSCLFAYCIDH Trigger: GTGGTCAATGCAATATGCAAAAAGGCAGGAGACCAAAGCATGTGGGCACCTCTCTGGGCTTATTTCCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CCA 90 bp | CAACATAAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTGTCTCTCTTGCTTTGGTaGGTGTGTGTATACCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHKLFSGSPVCRLTMQILSLLLW*VCVYLH Trigger: ATGAAGGTATACACACACCCACCAAAGCAAGAGAGA...CAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTTATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS-3UTR CCA 90 bp | CAACATAAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTGATCTCTCTCTTGCTTTaGTGGGTGTGTGTATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHKLFSGSPVCRLTMQILISLLL*WVCVYL Trigger: AAGGTATACACACACCCACCAAAGCAAGAGAGAGAT...CAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTTATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS-3UTR TCA 90 bp | GCCATTGAAATGTTAACACTGAAACCCTGCAGCAGTGGGGAGAGTGTGCATGCTATAAGAAATTACTGCTaGTCTAAAAGGAAGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIEMLTLKPCSSGESVHAIRNYC*SKRKWQ Trigger: CTGCCACTTCCTTTTAGATCAGCAGTAATTTCTTAT...AGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAAGCAGTGGGGAGAGTGTaGATGCTTTCTGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSLHQEHTKKTIPATLKAVGRV*MLSAAG Trigger: ACCAGCAGCAGAAAGCATGCACACTCTCCCCACTGC...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| 3UTR CAA 72 bp | AAGAATGGACAAACTTCTAGGATAGAATTATGGGTGTaGCTCAGATGGGTAGCAGAGAAACTGGGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KNGQTSRIELWV*LRWVAEKLGKL Trigger: GAGCTTCCCCAGTTTCTCTGCTACCCATCTGAGCAACACCCATAATTCTATCCTAGAAGTTTGTCCATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | CTTCAAGATGTCATGCCTTTCCAGACTGAACCAACGTTCTTCTTACATATATTGGTGGCAGAGTCTGATTaGTCTTGTCTTGTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQDVMPFQTEPTFFLHILVAESD*SCLVPQ Trigger: CTGGGGAACAAGACAAGATCAATCAGACTCTGCCAC...CAATATATGTAAGAAGAACGTTGGTTCAGTCTGGAAAGGCATGACATCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526761.5 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCGTCCTGACTGATTACTaGAGAATGGACAAACTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPVLTDY*RMDKLL Trigger: TAGAAGTTTGTCCATTCTTCAGTAATCAGTCAGGAC...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCTTTTGCATATTGCATTaGCCACAGCAACACCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPFCILH*PQQHQQ Trigger: TTGTTGGTGTTGCTGTGGTCAATGCAATATGCAAAA...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAAAGAGAGGTGCCCACATaGTTTGGTCTCCTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVSLHQEHTKKTIPATLKREVPT*FGLLPF Trigger: AAAAGGCAGGAGACCAAAGCATGTGGGCACCTCTCT...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTCTCTACATCAGGAACACACAAAGAAAACAATTCCAGCAACCCTAAAAGGTGCCCACATGCTTTaGTCTCCTGCCTTTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVSLHQEHTKKTIPATLKGAHML*SPAFLH Trigger: ATGCAAAAAGGCAGGAGACCAAAGCATGTGGGCACC...TTTTAGGGTTGCTGGAATTGTTTTCTTTGTGTGTTCCTGATGTAGAGACACTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCAGTGGCTGTTTTACTTaGCTATTGTTAACAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RETGEALVLAIEMLTLKPSGCFT*LLLTDS Trigger: TGAGTCTGTTAACAATAGGCAAGTAAAACAGCCACT...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTTTAACACTGAAACCCTaGAGCAGTGGGGAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSLTLKP*SSGESV Trigger: CACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAA...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CCA 90 bp | GACAGTGCTGAAATGAACACTGGGCTGAGTGGTACCAAACATCAGTTTAGTCACTCCTCAACTATAAAGTaGGATAAAAGCGTATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSAEMNTGLSGTKHQFSHSSTIK*DKSVSH Trigger: ATGAGATACGCTTTTATCCCACTTTATAGTTGAGGA...GTGACTAAACTGATGTTTGGTACCACTCAGCCCAGTGTTCATTTCAGCACTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTTCCATCGTAGTCATCTaGATCCTCATCCTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSSIVVI*ILILRI Trigger: GATCCTGAGGATGAGGATTCAGATGACTACGATGGA...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | AGGTCCAGTATCACAATTCATGGTCAGTATAAGAAGCAATGTTATACAGTTTTCTCCATCGTAGTCATCTaGATCCTCATCCTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSSITIHGQYKKQCYTVFSIVVI*ILILRI Trigger: GATCCTGAGGATGAGGATTCAGATGACTACGATGGA...GAAAACTGTATAACATTGCTTCTTATACTGACCATGAATTGTGATACTGGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528364.1 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAACTCAGGACAGTGGCTAGTACAGAGGTCTCAGTAAATTTTAGTTTCGTGGCAGAAATCCCCTaGAATGTGTTAAATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKELRTVASTEVSVNFSFVAEIP*NVLNLC Trigger: GCAAAGATTTAACACATTTCAGGGGATTTCTGCCAC...GAAACTAAAATTTACTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | AATAAAGAACTCAGGACAGTGGCTAGTACAGAGGTCTCAGTAAATTTTAGTTTCAAACCAAGTACACTCTaGATCTTCTCGACATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKELRTVASTEVSVNFSFKPSTL*IFSTFC Trigger: GCAAAATGTCGAGAAGATTCAGAGTGTACTTGGTTT...GAAACTAAAATTTACTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | AATAAAGAACTCAGGACAGTGGCTAGTACAGAGGTCTCAGTAAATTTTAGTTTCCATGCTTTGGTCTCCTaGCTTTTTGCATATTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NKELRTVASTEVSVNFSFHALVS*LFAYCI Trigger: AATGCAATATGCAAAAAGGCAGGAGACCAAAGCATG...GAAACTAAAATTTACTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTTTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CCA 90 bp | AATAAAGAACTCAGGACAGTGGCTAGTACAGAGGTCTCAGTAAATTTTAGTTTCTCTAGGATAGAATTATaGGTGTTGCTCAGATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NKELRTVASTEVSVNFSFSRIEL*VLLRWV Trigger: TACCCATCTGAGCAACACCCATAATTCTATCCTAGA...GAAACTAAAATTTACTGAGACCTCTGTACTAGCCACTGTCCTGAGTTCTTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| 3UTR CAA 72 bp | CAAGAAACCAAGTACACTCTGAATCTTCTCGACATTTaGCTATCAGAGCAATTTATGTTCATGGAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QETKYTLNLLDI*LSEQFMFMESH Trigger: GTGACTTTCCATGAACATAAATTGCTCTGATAGCAAAATGTCGAGAAGATTCAGAGTGTACTTGGTTTCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR TCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTTCTTGTACTGGCCATTaGAATGTTAACACTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSSCTGH*NVNTET Trigger: GGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGA...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTCTGTCCTTGTTCATGTaGTTCCACATCATATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSLSLFM*FHIIFF Trigger: GAAGAATATGATGTGGAAGCACATGAACAAGGACAG...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR GCA 90 bp | AGGTCCAGTATCACAATTCATGGTCAGTATAAGAAGCAATGTTATACAGTTTTCCTGTCCTTGTTCATGTaGTTCCACATCATATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSSITIHGQYKKQCYTVFLSLFM*FHIIFF Trigger: GAAGAATATGATGTGGAAGCACATGAACAAGGACAG...GAAAACTGTATAACATTGCTTCTTATACTGACCATGAATTGTGATACTGGACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528364.1 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCACAATAGCAGTAACTTGGAAGCTAACTGGAACTTTAAAAGGCTGGTTACAATAGCAGTAACTTaGAAGCTAACTGGAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SFHNSSNLEANWNFKRLVTIAVT*KLTGTL Trigger: TAAAGTTCCAGTTAGCTTCCAAGTTACTGCTATTGT...AACCAGCCTTTTAAAGTTCCAGTTAGCTTCCAAGTTACTGCTATTGTGAAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528364.1 |
||
| 3UTR CAA 72 bp | TTAGTTTCCATTTCAAGTGGCTGTTTTACTTGCCTATaGTTAACAGACTCAGAAATTCTGAGAGTCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVSISSGCFTCL*LTDSEILRVWL Trigger: TAACCAGACTCTCAGAATTTCTGAGTCTGTTAACAATAGGCAAGTAAAACAGCCACTTGAAATGGAAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS TCA 90 bp | ACTGTGAGCATCTGCACAGCGGCAGCGTCCTTCCACTGTAGAAGCTaGAAGGCCCAGATACTCCTTCTGCCCTTGGCAATGAAGACACAC | + |
|
Preference number: 5 (lower is better) Translates to: TVSICTAAASFHCRS*KAQILLLPLAMKTH Trigger: GTGTGTCTTCATTGCCAAGGGCAGAAGGAGTATCTGGGCCTTTCAGCTTCTACAGTGGAAGGACGCTGCCGCTGTGCAGATGCTCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533957.1 |
||
| CDS GCA 90 bp | CAGAGTCCTGGTAAGACTGCTGGCATCAGGGTGAAGGGTGAAGACTaGTCTCAGCTGATAGGGCTCTTTCCAGCCATCCTGAGATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSPGKTAGIRVKGED*SQLIGLFPAILRSS Trigger: GGAAGATCTCAGGATGGCTGGAAAGAGCCCTATCAGCTGAGAGCAGTCTTCACCCTTCACCCTGATGCCAGCAGTCTTACCAGGACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527265.1 |
||
| CDS-3UTR CAA 90 bp | GCCATTGAAATGTTAACACTGAAACCCTGCAGCAGTGGGGAGAGTGTGCATGCTGATGTCCCCCTGTCCTaGTTCATGTGCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: AIEMLTLKPCSSGESVHADVPLS*FMCFHI Trigger: GATGTGGAAGCACATGAACAAGGACAGGGGGACATC...AGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAGTCTGCCGGCTTACCATGCAGATTTTGGACTTGCCAGCCTTCAGTCAAATCTCTCTCTTGCTTaGGTGGGTGTGTGTATACCT | + |
|
Preference number: 5 (lower is better) Translates to: VSSLPAYHADFGLASLQSNLSLA*VGVCIP Trigger: AGGTATACACACACCCACCAAAGCAAGAGAGAGATT...TGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS GCA 90 bp | AAAGGCCCAGATACTCCTTCTGCCCTTGGCAATGAAGACACACAGTaGCAACCAGAAGTTTGCATCTTAAGTGTGGTGACTCACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: KGPDTPSALGNEDTQ*QPEVCILSVVTHRH Trigger: GTGTCTGTGAGTCACCACACTTAAGATGCAAACTTCTGGTTGGCACTGTGTGTCTTCATTGCCAAGGGCAGAAGGAGTATCTGGGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533957.1 |
||
| CDS CCA 90 bp | AACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTaGACTTGCCAGCCTTCAGTCACGTGGGCCAATTTCTTAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NSSLGLQSAGLPCRF*TCQPSVTWANFLKS Trigger: AGATTTTAAGAAATTGGCCCACGTGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS-3UTR CAA 90 bp | GCCATTGAAATGTTAACACTGAAACCCTGCAGCAGTGGGGAGAGTGTGCATGCTAAACTGGGGAAGCTCTaGTACTGGCCATTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: AIEMLTLKPCSSGESVHAKLGKL*YWPLKC Trigger: ACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTT...AGCATGCACACTCTCCCCACTGCTGCAGGGTTTCAGTGTTAACATTTCAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CAA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCAGGTGCCCACATGCTTaGGTCTCCTGCCTTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RETGEALVLAIEMLTLKPRCPHA*VSCLFA Trigger: TGCAAAAAGGCAGGAGACCAAAGCATGTGGGCACCT...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CAA 90 bp | CAACATAAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTGCTTACCATGCAGATTTaGGACTTGCCAGCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QHKLFSGSPVCRLTMQILLTMQI*DLPAFS Trigger: ACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAG...CAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTTATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS-3UTR CAA 90 bp | GACAGTGCTGAAATGAACACTGGGCTGAGTGGTACCAAACATCAGTTTAGTCACATAGAATTATGGGTGTaGCTCAGATGGGTAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSAEMNTGLSGTKHQFSHIELWV*LRWVAE Trigger: CTCTGCTACCCATCTGAGCAACACCCATAATTCTAT...GTGACTAAACTGATGTTTGGTACCACTCAGCCCAGTGTTCATTTCAGCACTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CAA 90 bp | CAACATAAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTTGCTTAAAATCTCTCTCTaGCTTTGGTGGGTGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QHKLFSGSPVCRLTMQILLKISL*LWWVCV Trigger: TACACACACCCACCAAAGCAAGAGAGAGATTTTAAG...CAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTTATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000526009.5 |
||
| CDS-3UTR CAA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCTGGTCTCCTGCCTTTTaGCATATTGCATTGACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RETGEALVLAIEMLTLKPWSPAF*HIALTT Trigger: TGTGGTCAATGCAATATGCAAAAAGGCAGGAGACCA...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CAA 90 bp | AGGTCCAGTATCACAATTCATGGTCAGTATAAGAAGCAATGTTATACAGTTTTCGATGTCCCCCTGTCCTaGTTCATGTGCTTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: RSSITIHGQYKKQCYTVFDVPLS*FMCFHI Trigger: GATGTGGAAGCACATGAACAAGGACAGGGGGACATC...GAAAACTGTATAACATTGCTTCTTATACTGACCATGAATTGTGATACTGGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000528364.1 |
||
| CDS-3UTR CAA 90 bp | AGAGAAACTGGGGAAGCTCTTGTACTGGCCATTGAAATGTTAACACTGAAACCCAAGTGGCTGTTTTACTaGCCTATTGTTAACAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: RETGEALVLAIEMLTLKPKWLFY*PIVNRL Trigger: GAGTCTGTTAACAATAGGCAAGTAAAACAGCCACTT...GGGTTTCAGTGTTAACATTTCAATGGCCAGTACAAGAGCTTCCCCAGTTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525428.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCACAATAGCAGTAACTTGGAAGCTAACTGGAACTTTAAAAGGCTGGTTCACAATAGCAGTAACTaGGAAGCTAACTGGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFHNSSNLEANWNFKRLVHNSSN*EANWNF Trigger: AAAGTTCCAGTTAGCTTCCAAGTTACTGCTATTGTG...AACCAGCCTTTTAAAGTTCCAGTTAGCTTCCAAGTTACTGCTATTGTGAAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528364.1 |
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| CDS-3UTR CAA 90 bp | CTATTTTCTCAATGCTACGGTTCTAACTATCTAGTGAATGTTACAGCTCAATCTCAGCAACAGGTTCTTTaGATTCTTCTTCAAATTTGG | + |
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Preference number: 5 (lower is better) Translates to: LFSQCYGSNYLVNVTAQSQQQVL*ILLQIW Trigger: CCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTG...AGATTGAGCTGTAACATTCACTAGATAGTTAGAACCGTAGCATTGAGAAAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525428.6 |
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| CDS-3UTR CAA 90 bp | AGGTCCAGTATCACAATTCATGGTCAGTATAAGAAGCAATGTTATACAGTTTTCCAGCAACAGGTTCTTTaGATTCTTCTTCAAATTTGG | + |
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Preference number: 5 (lower is better) Translates to: RSSITIHGQYKKQCYTVFQQQVL*ILLQIW Trigger: CCAAATTTGAAGAAGAATCAAAAGAACCTGTTGCTG...GAAAACTGTATAACATTGCTTCTTATACTGACCATGAATTGTGATACTGGACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528364.1 |
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| CDS GCA 72 bp | GGTAAGACTGCTGGCATCAGGGTGAAGGGTGAAGACTaGTCTCAGCTGATAGGGCTCTTTCCAGCCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: GKTAGIRVKGED*SQLIGLFPAIL Trigger: CAGGATGGCTGGAAAGAGCCCTATCAGCTGAGAGCAGTCTTCACCCTTCACCCTGATGCCAGCAGTCTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527265.1 |
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| CDS TCA 72 bp | GCTGAAAGGCCCAGATACTCCTTCTGCCCTTGGCAATaGAGACACACAGTGCCAACCAGAAGTTTGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: AERPRYSFCPWQ*RHTVPTRSLHL Trigger: AAGATGCAAACTTCTGGTTGGCACTGTGTGTCTTCATTGCCAAGGGCAGAAGGAGTATCTGGGCCTTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533957.1 |
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| CDS CAA 90 bp | AAACTCTTCTCTGGGTCTCCAGTCTGCCGGCTTACCATGCAGATTTaGGACTTGCCAGCCTTCAGTCACGTGGGCCAATTTCTTAAAATC | + |
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Preference number: 6 (lower is better) Translates to: KLFSGSPVCRLTMQI*DLPAFSHVGQFLKI Trigger: GATTTTAAGAAATTGGCCCACGTGACTGAAGGCTGGCAAGTCCAAAATCTGCATGGTAAGCCGGCAGACTGGAGACCCAGAGAAGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526009.5 |
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| CDS GCA 72 bp | GATACTCCTTCTGCCCTTGGCAATGAAGACACACAGTaGCAACCAGAAGTTTGCATCTTAAGTGTGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: DTPSALGNEDTQ*QPEVCILSVVT Trigger: AGTCACCACACTTAAGATGCAAACTTCTGGTTGGCACTGTGTGTCTTCATTGCCAAGGGCAGAAGGAGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533957.1 |
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