RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLNK (Homo sapiens)

Ensembl gene IDs: ENSG00000109684

Ensembl transcript IDs: ENST00000226951.11, ENST00000442825.6, ENST00000507719.1, ENST00000515667.5

Found 332 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACATTACTGCCCAGCATAACACTGTCTCCTCTCTGGGCAAACTTTaGTTTGGGCCTCACTATGAGCTGGCCAAAACTCTCCCAGAGCTG +
Preference number: 1 (lower is better)
Translates to: DITAQHNTVSSLGKL*FGPHYELAKTLPEL
Trigger: CAGCTCTGGGAGAGTTTTGGCCAGCTCATAGTGAGGCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGTTATGCTGGGCAGTAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 90 bp CCTTGTTTCCATACTGTCCCTGGCTTGTTGAATTCCAGTAGAGAATaGCCAGCAACCATACAGCTTTTAGCTTTGACCGGACCAGTGAGT +
Preference number: 1 (lower is better)
Translates to: PCFHTVPGLLNSSRE*PATIQLLALTGPVS
Trigger: ACTCACTGGTCCGGTCAAAGCTAAAAGCTGTATGGTTGCTGGTCATTCTCTACTGGAATTCAACAAGCCAGGGACAGTATGGAAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CCA 90 bp AAAATGTCACAGCGCAGAGAATGTACCTGGGAAGATGAGCTTGCATaGAGCCAGGCAAAGCAGATTACAATCTGGGCTCTCTTCTCATAT +
Preference number: 1 (lower is better)
Translates to: KMSQRRECTWEDELA*SQAKQITIWALFSY
Trigger: ATATGAGAAGAGAGCCCAGATTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGCGCTGTGACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR GCA 90 bp GACTTGTCTTGCACTGACTGCAAACATTTAAGCAACAGCTTCTGGTaGCCTTTGCTGCTCGCCTGTATCATGAGCATAATGGCTATGTTT +
Preference number: 1 (lower is better)
Translates to: DLSCTDCKHLSNSFW*PLLLACIMSIMAMF
Trigger: AAACATAGCCATTATGCTCATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGACAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CCA 90 bp ATAGACTTGTCTTGCACTGACTGCAAACATTTAAGCAACAGCTTCTaGTGCCCTTTGCTGCTCGCCTGTATCATGAGCATAATGGCTATG +
Preference number: 1 (lower is better)
Translates to: IDLSCTDCKHLSNSF*CPLLLACIMSIMAM
Trigger: CATAGCCATTATGCTCATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGACAAGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CCA 90 bp TCAAACATTAACCTCCAATCAGTGTTTGCACTTCTAACTTTGTCCTaGTGTCTGAGTTCTAGAAAACCCGACACCCAATCCCTCAAACCC +
Preference number: 1 (lower is better)
Translates to: SNINLQSVFALLTLS*CLSSRKPDTQSLKP
Trigger: GGGTTTGAGGGATTGGGTGTCGGGTTTTCTAGAACTCAGACACCAGGACAAAGTTAGAAGTGCAAACACTGATTGGAGGTTAATGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 90 bp TGGAGCCAGGCAAAGCAGATTACAATCTGGGCTCTCTTCTCATATTaGGTAAGATCAATAGCTACTTCGAGCCTCTGTTTCCTCATCTTT +
Preference number: 1 (lower is better)
Translates to: WSQAKQITIWALFSY*VRSIATSSLCFLIF
Trigger: AAAGATGAGGAAACAGAGGCTCGAAGTAGCTATTGATCTTACTCAATATGAGAAGAGAGCCCAGATTGTAATCTGCTTTGCCTGGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 90 bp TGTAAGAAATCATCCACACATTGTATATATGTAAGGCCCAACAACTaGCATAAAGGCAGCGCAGTGTCCTGTAAAGAGCACAGATTTGGG +
Preference number: 1 (lower is better)
Translates to: CKKSSTHCIYVRPNN*HKGSAVSCKEHRFG
Trigger: CCCAAATCTGTGCTCTTTACAGGACACTGCGCTGCCTTTATGTCAGTTGTTGGGCCTTACATATATACAATGTGTGGATGATTTCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 90 bp AAATATTATTTCAAACGTACACCTTATCAAATGCTAACCCCCACTTaGCATTCACCTATTTTATCAACAGCAATGGTTGAGAGGACTCAT +
Preference number: 1 (lower is better)
Translates to: KYYFKRTPYQMLTPT*HSPILSTAMVERTH
Trigger: ATGAGTCCTCTCAACCATTGCTGTTGATAAAATAGGTGAATGTCAAGTGGGGGTTAGCATTTGATAAGGTGTACGTTTGAAATAATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATCTTCCCTCTCACAGGTaGGAGCCTGAAAGCCCACCC +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHLPSHR*EPESPP
Trigger: GGGTGGGCTTTCAGGCTCCCACCTGTGAGAGGGAAG...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATAGCAACAGCTTCTGGTaGCCTTTGCTGCTCGCCTGT +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHSNSFW*PLLLAC
Trigger: ACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATACACTGTCTCCTCTCTaGGCAAACTTTGCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHTLSPL*ANFALG
Trigger: GCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATTCCCAGAGCTGTGTCTaGATCTCATGCTTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHSQSCV*ISCFFS
Trigger: GGAGAAAAAGCATGAGATTCAGACACAGCTCTGGGA...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATCTCTGTCCCCAGGCTaGATTGGAGTGCAGTGGCGC +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLSLSPG*IGVQWR
Trigger: GCGCCACTGCACTCCAATCCAGCCTGGGGACAGAGA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGATTCCTTCTTAATGTaGGCCTGGAGCTCTTCTGTA +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHDSFLM*AWSSSV
Trigger: TACAGAAGAGCTCCAGGCTCACATTAAGAAGGAATC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 90 bp TTACTGCCCAGCATAACACTGTCTCCTCTCTGGGCAAACTTTGCTTaGGGCCTCACTATGAGCTGGCCAAAACTCTCCCAGAGCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LLPSITLSPLWANFA*GLTMSWPKLSQSCV
Trigger: GACACAGCTCTGGGAGAGTTTTGGCCAGCTCATAGTGAGGCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGTTATGCTGGGCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTGGAGGCTGGTCCCATaGCCGTTTCACACCCTAGTC +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIWRLVP*PFHTLV
Trigger: GACTAGGGTGTGAAACGGTCATGGGACCAGCCTCCA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTAGCAACAGCTTCTGGTaGCCTTTGCTGCTCGCCTGT +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSISNSFW*PLLLAC
Trigger: ACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATGGATTGGAGTGCAGTaGCGCGATTTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQWIGVQ*RDFGSL
Trigger: CAGTGAGCCGAAATCGCGCCACTGCACTCCAATCCA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTGGATTGGAGTGCAGTaGCGCGATTTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIWIGVQ*RDFGSL
Trigger: CAGTGAGCCGAAATCGCGCCACTGCACTCCAATCCA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATAACACTCTTGTCTCTTaGTTCTATGTAATCCTCTGC +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHNTLVS*FYVILC
Trigger: GCAGAGGATTACATAGAACCAAGAGACAAGAGTGTT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTATGGTCTTGATCTCCTaGCCTCGTGATCTGTCCACC +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIMVLIS*PRDLST
Trigger: GGTGGACAGATCACGAGGTCAGGAGATCAAGACCAT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTTAAGCAACAGCTTCTaGTGCCCTTTGCTGCTCGCC +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSILSNSF*CPLLLA
Trigger: GGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATCTTCTAACTTTGTCCTaGTGTCTGAGTTCTAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHLLTLS*CLSSRK
Trigger: TTTTCTAGAACTCAGACACCAGGACAAAGTTAGAAG...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGATGGAGGCTGGTCCCATaGCCGTTTCACACCCTAGTC +
Preference number: 2 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGWRLVP*PFHTLV
Trigger: GACTAGGGTGTGAAACGGTCATGGGACCAGCCTCCA...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
3UTR-3UTR CCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGAAGATGAGCTTGCATaGAGCCAGGCAAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPEDELA*SQAKQI
Trigger: AATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGGCATCACTTCACATTaGCCTTGTGAAAGGAGAACA +
Preference number: 2 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPGITSH*PCERRT
Trigger: TGTTCTCCTTTCACAAGGTCAATGTGAAGTGATGCC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTATGGCATGGCCTCAATaGATCAGTGAGTTGGAGGTA +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIMAWPQ*ISELEV
Trigger: TACCTCCAACTCACTGATTCATTGAGGCCATGCCAT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTCCTCAGACATATGCTTaGCTGAAGGCTAGTGTAGGA +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIPQTYA*LKASVG
Trigger: TCCTACACTAGCCTTCAGGCAAGCATATGTCTGAGG...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAACCTCAGACATATGCTTaGCTGAAGGCTAGTGTAGGA +
Preference number: 2 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQPQTYA*LKASVG
Trigger: TCCTACACTAGCCTTCAGGCAAGCATATGTCTGAGG...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTTTAAGCAACAGCTTCTaGTGCCCTTTGCTGCTCGCC +
Preference number: 2 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSLSNSF*CPLLLA
Trigger: GGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAA...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 90 bp ATTGTAAAATGTCACAGCGCAGAGAATGTACCTGGGAAGATGAGCTaGCATGGAGCCAGGCAAAGCAGATTACAATCTGGGCTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: IVKCHSAENVPGKMS*HGARQSRLQSGLSS
Trigger: AGAAGAGAGCCCAGATTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGCGCTGTGACATTTTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGAACTTTCAAAACCGTaGGTGATTTTCCACTCTCTG +
Preference number: 2 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPELSKP*VIFHSL
Trigger: CAGAGAGTGGAAAATCACTCACGGTTTTGAAAGTTC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATACGATAGGCTCAGCTaGGTCTCAAAAGTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITYDRLS*VSKVPA
Trigger: AGCTGGAACTTTTGAGACCCAGCTGAGCCTATCGTA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGAACTTTCAAAACCGTaGGTGATTTTCCACTCTCTG +
Preference number: 2 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQELSKP*VIFHSL
Trigger: CAGAGAGTGGAAAATCACTCACGGTTTTGAAAGTTC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAAGACTTGTCTTGCACTaGCTGCAAACATTTAAGCAA +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLRLVLH*LQTFKQ
Trigger: TTGCTTAAATGTTTGCAGTCAGTGCAAGACAAGTCT...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAATGCTAACCCCCACTTaGCATTCACCTATTTTATCA +
Preference number: 2 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPMLTPT*HSPILS
Trigger: TGATAAAATAGGTGAATGTCAAGTGGGGGTTAGCAT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACCCATAGACTTGTCTTaGACTGACTGCAAACATTTA +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLPIDLS*TDCKHL
Trigger: TAAATGTTTGCAGTCAGTGCAAGACAAGTCTATGGG...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGGTGACATTCACAATTaGTGGTTTTCCATACCACAT +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLGDIHN*WFSIPH
Trigger: ATGTGGTATGGAAAACCAGCAATTGTGAATGTCACC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTGAAGATGAGCTTGCATaGAGCCAGGCAAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSEDELA*SQAKQI
Trigger: AATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTC...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 90 bp ATTGTCCTTACTACAATCAACACTGAAAACAGTGAATTCAGGATGTaGCTGTGGCAGGCCAGAGGTGGGTCTCTTGAGTCTCCATTGAAA +
Preference number: 2 (lower is better)
Translates to: IVLTTINTENSEFRM*LWQARGGSLESPLK
Trigger: TTTCAATGGAGACTCAAGAGACCCACCTCTGGCCTGCCACAGCAACATCCTGAATTCACTGTTTTCAGTGTTGATTGTAGTAAGGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATTTCAAAACCGTGAGTaGTTTTCCACTCTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLFQNRE*FSTLCY
Trigger: ATAACAGAGAGTGGAAAATCACTCACGGTTTTGAAA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAATTTTCTCTGTGGTTTaGACTTTCAAAACCGTGAGT +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLIFSVV*TFKTVS
Trigger: ACTCACGGTTTTGAAAGTTCAAACCACAGAGAAAAT...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCATGGTCTTGATCTCCTaGCCTCGTGATCTGTCCACC +
Preference number: 2 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFMVLIS*PRDLST
Trigger: GGTGGACAGATCACGAGGTCAGGAGATCAAGACCAT...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGCTCTCTTCTCATATTaGGTAAGATCAATAGCTACT +
Preference number: 2 (lower is better)
Translates to: AENVPGKMSLHGARQSRLALFSY*VRSIAT
Trigger: AGTAGCTATTGATCTTACTCAATATGAGAAGAGAGC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTAATAGCTTTTTAGGGTaGGGGTCAGATTCCTTCTTA +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSINSFLG*GSDSFL
Trigger: TAAGAAGGAATCTGACCCTCACCCTAAAAAGCTATT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTCCCATAGACTTGTCTTaGACTGACTGCAAACATTTA +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIPIDLS*TDCKHL
Trigger: TAAATGTTTGCAGTCAGTGCAAGACAAGTCTATGGG...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGGTGACATTCACAATTaGTGGTTTTCCATACCACAT +
Preference number: 2 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQGDIHN*WFSIPH
Trigger: ATGTGGTATGGAAAACCAGCAATTGTGAATGTCACC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTTTTCCCCTCATTCTTaGTGTCATCTTAAGGATGCT +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIFSPHS*CHLKDA
Trigger: AGCATCCTTAAGATGACAGCAAGAATGAGGGGAAAA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTAACACTCTTGTCTCTTaGTTCTATGTAATCCTCTGC +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSINTLVS*FYVILC
Trigger: GCAGAGGATTACATAGAACCAAGAGACAAGAGTGTT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTTATCAACAGCAATaGTTGAGAGGACTCATAGAC +
Preference number: 2 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPFYQQQ*LRGLID
Trigger: GTCTATGAGTCCTCTCAACCATTGCTGTTGATAAAA...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 90 bp TCTTGCACTGACTGCAAACATTTAAGCAACAGCTTCTGGTGCCCTTaGCTGCTCGCCTGTATCATGAGCATAATGGCTATGTTTATAGTA +
Preference number: 2 (lower is better)
Translates to: SCTDCKHLSNSFWCP*LLACIMSIMAMFIV
Trigger: TACTATAAACATAGCCATTATGCTCATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 90 bp ATGGAGCCAGGCAAAGCAGATTACAATCTGGGCTCTCTTCTCATATaGAGTAAGATCAATAGCTACTTCGAGCCTCTGTTTCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: MEPGKADYNLGSLLI*SKINSYFEPLFPHL
Trigger: AAGATGAGGAAACAGAGGCTCGAAGTAGCTATTGATCTTACTCAATATGAGAAGAGAGCCCAGATTGTAATCTGCTTTGCCTGGCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATTTCAAAACCGTGAGTaGTTTTCCACTCTCTGTTAT +
Preference number: 2 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQFQNRE*FSTLCY
Trigger: ATAACAGAGAGTGGAAAATCACTCACGGTTTTGAAA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAAGACTTGTCTTGCACTaGCTGCAAACATTTAAGCAA +
Preference number: 2 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITRLVLH*LQTFKQ
Trigger: TTGCTTAAATGTTTGCAGTCAGTGCAAGACAAGTCT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGTTTTTCTCTGTCTTTaGATGGAAGTCCATAATTGG +
Preference number: 2 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIVFLCL*MEVHNW
Trigger: CCAATTATGGACTTCCATTCAAAGACAGAGAAAAAC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR GCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATTGTCTTGCACTGACTaGAAACATTTAAGCAACAGC +
Preference number: 2 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITLSCTD*KHLSNS
Trigger: GCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGACAA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGACATTCACAATTGCTaGTTTTCCATACCACATTTC +
Preference number: 2 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQDIHNC*FSIPHF
Trigger: GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 90 bp GTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTTGTCTCTaGGTTCTATGTAATCCTCTGCAGGCATACTCTACGATAGGCTCA +
Preference number: 2 (lower is better)
Translates to: VSSFVSKLQFKHSCL*VLCNPLQAYSTIGS
Trigger: TGAGCCTATCGTAGAGTATGCCTGCAGAGGATTACATAGAACCAAGAGACAAGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAAATTCCAGTAGAGAATaGCCAGCAACCATACAGCTT +
Preference number: 2 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGNSSRE*PATIQL
Trigger: AAGCTGTATGGTTGCTGGTCATTCTCTACTGGAATT...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
3UTR-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACACTTCTAACTTTGTCCTaGTGTCTGAGTTCTAGAAAA +
Preference number: 2 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITLLTLS*CLSSRK
Trigger: TTTTCTAGAACTCAGACACCAGGACAAAGTTAGAAG...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR GCA 72 bp GAGACGGAGTCTCTCTGTCCCCAGGCTGGATTGGAGTaGAGTGGCGCGATTTCGGCTCACTGCAAGCTCCGC +
Preference number: 3 (lower is better)
Translates to: ETESLCPQAGLE*SGAISAHCKLR
Trigger: GCGGAGCTTGCAGTGAGCCGAAATCGCGCCACTGCACTCCAATCCAGCCTGGGGACAGAGAGACTCCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATAGCTTCTGGTGCCCTTaGCTGCTCGCCTGTATCATG +
Preference number: 3 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHSFWCP*LLACIM
Trigger: CATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATGTCCCCAGGCTGGATaGGAGTGCAGTGGCGCGATT +
Preference number: 3 (lower is better)
Translates to: AENVPGKMSLHGARQSRLCPQAG*ECSGAI
Trigger: AATCGCGCCACTGCACTCCAATCCAGCCTGGGGACA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATCATACTGTCCCTGGCTaGTTGAATTCCAGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHHTVPG*LNSSRE
Trigger: TTCTCTACTGGAATTCAACAAGCCAGGGACAGTATG...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 72 bp GGTTTCACCATGTTAGCCAGGATGGTCTTGATCTCCTaGCCTCGTGATCTGTCCACCTCAGCCTCCCAAAGT +
Preference number: 3 (lower is better)
Translates to: GFTMLARMVLIS*PRDLSTSASQS
Trigger: ACTTTGGGAGGCTGAGGTGGACAGATCACGAGGTCAGGAGATCAAGACCATCCTGGCTAACATGGTGAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 72 bp TGTGGCAGGCCAGAGGTGGGTCTCTTGAGTCTCCATTaGAATAACTTGCTGGCCAGCAAGTTAGTGGACAGC +
Preference number: 3 (lower is better)
Translates to: CGRPEVGLLSLH*NNLLASKLVDS
Trigger: GCTGTCCACTAACTTGCTGGCCAGCAAGTTATTTCAATGGAGACTCAAGAGACCCACCTCTGGCCTGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 72 bp CAGGATGTTGCTGTGGCAGGCCAGAGGTGGGTCTCTTaGGTCTCCATTGAAATAACTTGCTGGCCAGCAAGT +
Preference number: 3 (lower is better)
Translates to: QDVAVAGQRWVS*VSIEITCWPAS
Trigger: ACTTGCTGGCCAGCAAGTTATTTCAATGGAGACTCAAGAGACCCACCTCTGGCCTGCCACAGCAACATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR GCA 72 bp GCCCAGCATAACACTGTCTCCTCTCTGGGCAAACTTTaGTTTGGGCCTCACTATGAGCTGGCCAAAACTCTC +
Preference number: 3 (lower is better)
Translates to: AQHNTVSSLGKL*FGPHYELAKTL
Trigger: GAGAGTTTTGGCCAGCTCATAGTGAGGCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGTTATGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CCA 72 bp CAGCGCAGAGAATGTACCTGGGAAGATGAGCTTGCATaGAGCCAGGCAAAGCAGATTACAATCTGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: QRRECTWEDELA*SQAKQITIWAL
Trigger: GAGAGCCCAGATTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAAGCTTCTGGTGCCCTTaGCTGCTCGCCTGTATCATG +
Preference number: 3 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPSFWCP*LLACIM
Trigger: CATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGGCTCTCTTCTCATATaGAGTAAGATCAATAGCTAC +
Preference number: 3 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHGSLLI*SKINSY
Trigger: GTAGCTATTGATCTTACTCAATATGAGAAGAGAGCC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACACCTGGGAAGATGAGCTaGCATGGAGCCAGGCAAAGC +
Preference number: 3 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITPGKMS*HGARQS
Trigger: GCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGG...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CCA 72 bp TTTCCCAGGATAGCCCCAGACAATGACTTAACAGGATaGGGCACTAAGACCCAGACATTACTGCCCAGCATA +
Preference number: 3 (lower is better)
Translates to: FPRIAPDNDLTG*GTKTQTLLPSI
Trigger: TATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATTGTCTGGGGCTATCCTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCACTTGAGAACATAGCATaGAATGGCATGGCCTCAATG +
Preference number: 3 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPLENIA*NGMASM
Trigger: CATTGAGGCCATGCCATTCAATGCTATGTTCTCAAG...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGAATTTCCCATAGACTaGTCTTGCACTGACTGCAAA +
Preference number: 3 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPEFPID*SCTDCK
Trigger: TTTGCAGTCAGTGCAAGACAAGTCTATGGGAAATTC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTATACAGCTTTTAGCTTaGACCGGACCAGTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIIQLLA*TGPVSS
Trigger: AGAACTCACTGGTCCGGTCAAAGCTAAAAGCTGTAT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR GCA 72 bp TGCACTGACTGCAAACATTTAAGCAACAGCTTCTGGTaGCCTTTGCTGCTCGCCTGTATCATGAGCATAATG +
Preference number: 3 (lower is better)
Translates to: CTDCKHLSNSFW*PLLLACIMSIM
Trigger: CATTATGCTCATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAAATGTTTGCAGTCAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CCA 72 bp TCTTGCACTGACTGCAAACATTTAAGCAACAGCTTCTaGTGCCCTTTGCTGCTCGCCTGTATCATGAGCATA +
Preference number: 3 (lower is better)
Translates to: SCTDCKHLSNSF*CPLLLACIMSI
Trigger: TATGCTCATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGAATTTCCCATAGACTaGTCTTGCACTGACTGCAAA +
Preference number: 3 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQEFPID*SCTDCK
Trigger: TTTGCAGTCAGTGCAAGACAAGTCTATGGGAAATTC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATATCAACAGCAATGGTaGAGAGGACTCATAGACATT +
Preference number: 3 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPYQQQW*RGLIDI
Trigger: AATGTCTATGAGTCCTCTCAACCATTGCTGTTGATA...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 72 bp CATACTGTCCCTGGCTTGTTGAATTCCAGTAGAGAATaGCCAGCAACCATACAGCTTTTAGCTTTGACCGGA +
Preference number: 3 (lower is better)
Translates to: HTVPGLLNSSRE*PATIQLLALTG
Trigger: TCCGGTCAAAGCTAAAAGCTGTATGGTTGCTGGTCATTCTCTACTGGAATTCAACAAGCCAGGGACAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGTAAAGAGCACAGATTaGGGAATTTCCCATAGACTT +
Preference number: 3 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQVKSTD*GISHRL
Trigger: AAGTCTATGGGAAATTCCCAAATCTGTGCTCTTTAC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAAAACACTCTTGTCTCTaGGTTCTATGTAATCCTCTG +
Preference number: 3 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITKHSCL*VLCNPL
Trigger: CAGAGGATTACATAGAACCAAGAGACAAGAGTGTTT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGATCTTCTGTAAAGTCCTaGTTTCCATACTGTCCCTGG +
Preference number: 3 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGSSVKS*FPYCPW
Trigger: CCAGGGACAGTATGGAAACAAGGACTTTACAGAAGA...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
3UTR TCA 72 bp GCAAAGCAGATTACAATCTGGGCTCTCTTCTCATATTaGGTAAGATCAATAGCTACTTCGAGCCTCTGTTTC +
Preference number: 3 (lower is better)
Translates to: AKQITIWALFSY*VRSIATSSLCF
Trigger: GAAACAGAGGCTCGAAGTAGCTATTGATCTTACTCAATATGAGAAGAGAGCCCAGATTGTAATCTGCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTGAAATCATCCACACATaGTATATATGTAAGGCCCAA +
Preference number: 3 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSEIIHT*YICKAQ
Trigger: TTGGGCCTTACATATATACAATGTGTGGATGATTTC...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAGGCTCTCTTCTCATATaGAGTAAGATCAATAGCTAC +
Preference number: 3 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGGSLLI*SKINSY
Trigger: GTAGCTATTGATCTTACTCAATATGAGAAGAGAGCC...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
3UTR CCA 72 bp CTTGGTTCCAGTCGCGACTATGTCACTGTGAGATTTTaGCCAATGAGGTACAATTTCCTCAATTATAAAATG +
Preference number: 3 (lower is better)
Translates to: LGSSRDYVTVRF*PMRYNFLNYKM
Trigger: CATTTTATAATTGAGGAAATTGTACCTCATTGGCCAAAATCTCACAGTGACATAGTCGCGACTGGAACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR TCA 72 bp TTCAAACGTACACCTTATCAAATGCTAACCCCCACTTaGCATTCACCTATTTTATCAACAGCAATGGTTGAG +
Preference number: 3 (lower is better)
Translates to: FKRTPYQMLTPT*HSPILSTAMVE
Trigger: CTCAACCATTGCTGTTGATAAAATAGGTGAATGTCAAGTGGGGGTTAGCATTTGATAAGGTGTACGTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGAAATCATCCACACATaGTATATATGTAAGGCCCAA +
Preference number: 3 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFEIIHT*YICKAQ
Trigger: TTGGGCCTTACATATATACAATGTGTGGATGATTTC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGGTGTCCGTCTCCTGTaGGGAGGGGCGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPGVRLL*GGAAVQ
Trigger: CTGCACTGCCGCCCCTCCTCACAGGAGACGGACACC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGAGGGAGTGGCTGAGTaGGGTGACACTGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHEGVAE*GDTVSC
Trigger: ACAGGAAACAGTGTCACCTCACTCAGCCACTCCCTC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGTTCTCCTTCATGAATaGCTCTTCCACTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHVLLHE*LFHCLA
Trigger: CGCCAGGCAGTGGAAGAGGCATTCATGAAGGAGAAC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATTCAGGGGGCAAGGGTTaGTACTTCTTCGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHSGGKG*YFFGSV
Trigger: AACACTTCCGAAGAAGTACCAACCCTTGCCCCCTGA...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATTCCCTTAAGCTTATCTaGCTGGGCATTCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHSLKLI*LGILWT
Trigger: AGTCCAGAGAATGCCCAGTCAGATAAGCTTAAGGGA...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGAAGATGAGCTTGCATaGAGCCAGGCAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHEDELA*SQAKQI
Trigger: AATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGTTGCTTGTCGTGAATaGAGAACTGCTAATGGCAAG +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHVACRE*RTANGK
Trigger: CTTGCCATTAGCAGTTCTTCATTCACGACAAGCAAC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGGAGGCTGGCATCTCTaGGGAGAACAGGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIGGWHL*GEQGCM
Trigger: CATGCAGCCCTGTTCTCCTCAGAGATGCCAGCCTCC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATCACAGGTGGGAGCCTaGAAGCCCACCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQSQVGA*KPTPYP
Trigger: TGGGTATGGGGTGGGCTTTCAGGCTCCCACCTGTGA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAACTTCCCTCTCACAGGTaGGAGCCTGAAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQLPSHR*EPESPP
Trigger: GGGTGGGCTTTCAGGCTCCCACCTGTGAGAGGGAAG...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGGCCTGTGGCACTATTaGTGCGAGGCCATGACCTGT +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQGLWHY*CEAMTC
Trigger: ACAGGTCATGGCCTCGCATCAATAGTGCCACAGGCC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGAACTTTCAAAACCGTaGGTGATTTTCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHELSKP*VIFHSL
Trigger: CAGAGAGTGGAAAATCACTCACGGTTTTGAAAGTTC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATGGAGGCTGGTCCCATaGCCGTTTCACACCCTAGTC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQWRLVP*PFHTLV
Trigger: GACTAGGGTGTGAAACGGTCATGGGACCAGCCTCCA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAATGTACCTGGGAAGATaGGCTTGCATGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPMYLGR*ACMEPG
Trigger: GCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACAT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAATAAAGGTGGCCTGCTaGTCTCCGGCTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITIKVAC*SPAQGA
Trigger: TGCCCCCTGAGCCGGAGAGCAGCAGGCCACCTTTAT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR GCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAGAGATAAAGGTGGCCTaGTGCTCTCCGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITEIKVA*CSPAQG
Trigger: CCCCTGAGCCGGAGAGCAGCAGGCCACCTTTATCTC...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTATTTTCGTGAGGGCTaGAGCTGGCTGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIYFREG*SWLEAG
Trigger: GCCAGCCTCCAGCCAGCTGCAGCCCTCACGAAAATA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATATTTTCGTGAGGGCTaGAGCTGGCTGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQYFREG*SWLEAG
Trigger: GCCAGCCTCCAGCCAGCTGCAGCCCTCACGAAAATA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAAGCAACAGCTTCTGGTaGCCTTTGCTGCTCGCCTGT +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPSNSFW*PLLLAC
Trigger: ACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATCTCTGTCCCCAGGCTaGATTGGAGTGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITSLSPG*IGVQWR
Trigger: GCGCCACTGCACTCCAATCCAGCCTGGGGACAGAGA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCACTGCGCCTTCTGGATTaGCCACAGCATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPLRLLD*PQHLQV
Trigger: GACCTGCAAATGCTGTGGCCAATCCAGAAGGCGCAG...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACTGCGCCTTCTGGATTaGCCACAGCATTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLLRLLD*PQHLQV
Trigger: GACCTGCAAATGCTGTGGCCAATCCAGAAGGCGCAG...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATTCAGGATGTTGCTGTaGCAGGCCAGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLFRMLL*QARGGS
Trigger: AGACCCACCTCTGGCCTGCCACAGCAACATCCTGAA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATAATAGCTTTTTAGGGTaGGGGTCAGATTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHNSFLG*GSDSFL
Trigger: TAAGAAGGAATCTGACCCTCACCCTAAAAAGCTATT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGAATGCCTCTTCCACTaGCTGGCGGCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIECLFH*LAAVFS
Trigger: GGAGAATACAGCCGCCAGGCAGTGGAAGAGGCATTC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTTCAGGATGTTGCTGTaGCAGGCCAGAGGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIFRMLL*QARGGS
Trigger: AGACCCACCTCTGGCCTGCCACAGCAACATCCTGAA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 72 bp TGTCACAGCGCAGAGAATGTACCTGGGAAGATGAGCTaGCATGGAGCCAGGCAAAGCAGATTACAATCTGGG +
Preference number: 4 (lower is better)
Translates to: CHSAENVPGKMS*HGARQSRLQSG
Trigger: CCCAGATTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGCGCTGTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 72 bp AGCATAACACTGTCTCCTCTCTGGGCAAACTTTGCTTaGGGCCTCACTATGAGCTGGCCAAAACTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SITLSPLWANFA*GLTMSWPKLSQ
Trigger: CTGGGAGAGTTTTGGCCAGCTCATAGTGAGGCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGTTATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTCTTCGGAAGTGTTATaGGAGGCCGAGGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSISSEVL*EAEEVV
Trigger: TACCACCTCCTCGGCCTCTCATAACACTTCCGAAGA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAGGAGGCTGGCATCTCTaGGGAGAACAGGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGGGWHL*GEQGCM
Trigger: CATGCAGCCCTGTTCTCCTCAGAGATGCCAGCCTCC...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATTTTCAAAACCGTGAGTaGTTTTCCACTCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHFQNRE*FSTLCY
Trigger: ATAACAGAGAGTGGAAAATCACTCACGGTTTTGAAA...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAATGGTCTTGATCTCCTaGCCTCGTGATCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQMVLIS*PRDLST
Trigger: GGTGGACAGATCACGAGGTCAGGAGATCAAGACCAT...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGCTCTCTTCTCATATTaGGTAAGATCAATAGCTACT +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHALFSY*VRSIAT
Trigger: AGTAGCTATTGATCTTACTCAATATGAGAAGAGAGC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAATGTACCTGGGAAGATaGGCTTGCATGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITMYLGR*ACMEPG
Trigger: GCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACAT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGATCACAGGTGGGAGCCTaGAAGCCCACCCCATACCCA +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGSQVGA*KPTPYP
Trigger: TGGGTATGGGGTGGGCTTTCAGGCTCCCACCTGTGA...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR GCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGAGAACAGGGCTGCATaGCTCCTCTATGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPENRAA*LLYDLC
Trigger: ACAGAGATCATAGAGGAGGCATGCAGCCCTGTTCTC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR GCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATATGTACCATTCATTGTaGTGGACATCCTTTCTATCA +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHMYHSL*WTSFLS
Trigger: TGATAGAAAGGATGTCCAGCACAATGAATGGTACAT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAGAATGCCTCTTCCACTaGCTGGCGGCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITECLFH*LAAVFS
Trigger: GGAGAATACAGCCGCCAGGCAGTGGAAGAGGCATTC...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATAGAGAGCTCATTGTCTaGTGTCTTACAAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHRELIV*CLTKEI
Trigger: TATCTCTTTTGTAAGACAGCAGACAATGAGCTCTCT...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAACCTGTTCATAGTTCTTaGCACCTGGCGGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQPVHSS*HLAGKR
Trigger: CCTCTTACCCGCCAGGTGCCAAGAACTATGAACAGG...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATTAAGCAACAGCTTCTaGTGCCCTTTGCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQLSNSF*CPLLLA
Trigger: GGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATGGATTGGAGTGCAGTaGCGCGATTTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITWIGVQ*RDFGSL
Trigger: CAGTGAGCCGAAATCGCGCCACTGCACTCCAATCCA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATGCATGCCTCCTCTATaGTCTCTGTTTTGCACACTG +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPCMPPL*SLFCTL
Trigger: CAGTGTGCAAAACAGAGATCATAGAGGAGGCATGCA...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGAAGATGAGCTTGCATaGAGCCAGGCAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLEDELA*SQAKQI
Trigger: AATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAACACTGTCTCCTCTCTaGGCAAACTTTGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQTLSPL*ANFALG
Trigger: GCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGT...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTACACTGTCTCCTCTCTaGGCAAACTTTGCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSITLSPL*ANFALG
Trigger: GCCCAAAGCAAAGTTTGCCCAGAGAGGAGACAGTGT...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAGATTCCTTCTTAATGTaGGCCTGGAGCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPDSFLM*AWSSSV
Trigger: TACAGAAGAGCTCCAGGCTCACATTAAGAAGGAATC...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAATGGCATGGCCTCAATaGATCAGTGAGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQMAWPQ*ISELEV
Trigger: TACCTCCAACTCACTGATTCATTGAGGCCATGCCAT...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATCCCAGAGCTGTGTCTaGATCTCATGCTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQSQSCV*ISCFFS
Trigger: GGAGAAAAAGCATGAGATTCAGACACAGCTCTGGGA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGAGGAGGGGCGGCAGTaGAGAGACCTTGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQEEGRQ*RDLGAL
Trigger: CAGTGCCCCAAGGTCTCTGCACTGCCGCCCCTCCTC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTGGCTTGTTCATCCTCTaGTACTGGCCTGTGGCACTA +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSGLFIL*YWPVAL
Trigger: TAGTGCCACAGGCCAGTACCAGAGGATGAACAAGCC...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATTCTATCAGACCTTTTaGGGAAAGGTGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQFYQTF*GKVVSS
Trigger: GCTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTCTCTGTCCCCAGGCTaGATTGGAGTGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFSLSPG*IGVQWR
Trigger: GCGCCACTGCACTCCAATCCAGCCTGGGGACAGAGA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAATACGATAGGCTCAGCTaGGTCTCAAAAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQYDRLS*VSKVPA
Trigger: AGCTGGAACTTTTGAGACCCAGCTGAGCCTATCGTA...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCCTTCCCTCTCACAGGTaGGAGCCTGAAAGCCCACCC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFLPSHR*EPESPP
Trigger: GGGTGGGCTTTCAGGCTCCCACCTGTGAGAGGGAAG...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAAATTCCAGTAGAGAATaGCCAGCAACCATACAGCTT +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLNSSRE*PATIQL
Trigger: AAGCTGTATGGTTGCTGGTCATTCTCTACTGGAATT...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACACTGTCCCTGGCTTGTTaGATTCCAGTAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITLSLAC*IPVEND
Trigger: GTCATTCTCTACTGGAATTCAACAAGCCAGGGACAG...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGCCTCAATGAATCAGTaGGTTGGAGGTATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLASMNQ*VGGISN
Trigger: ATTACTGATACCTCCAACTCACTGATTCATTGAGGC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGAGAACAGGGCTGCATaGCTCCTCTATGATCTTTTA +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIENRAA*LLYDLL
Trigger: TAAAAGATCATAGAGGAGGCATGCAGCCCTGTTCTC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515667.5
CDS-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTATAGTTCTTGGCACCTaGCGGGTAAGAGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSIVLGT*RVRGIF
Trigger: GAAGATCCCTCTTACCCGCCAGGTGCCAAGAACTAT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGGCTACATTCGACAATaGGGTTCATTTGATTCCTCC +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIGYIRQ*GSFDSS
Trigger: GGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
3UTR CAA 72 bp GACTGCAAACATTTAAGCAACAGCTTCTGGTGCCCTTaGCTGCTCGCCTGTATCATGAGCATAATGGCTATG +
Preference number: 4 (lower is better)
Translates to: DCKHLSNSFWCP*LLACIMSIMAM
Trigger: CATAGCCATTATGCTCATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAAATGTTTGCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAGGCTTCCTCTGGTTATaGGGAACTTTTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITGFLWL*GTFSAS
Trigger: TGAAGCAGAAAAAGTTCCTCATAACCAGAGGAAGCC...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGAGGCTGGCATCTCTaGGGAGAACAGGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQGGWHL*GEQGCM
Trigger: CATGCAGCCCTGTTCTCCTCAGAGATGCCAGCCTCC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR TCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGAGGGAGTGGCTGAGTaGGGTGACACTGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFEGVAE*GDTVSC
Trigger: ACAGGAAACAGTGTCACCTCACTCAGCCACTCCCTC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTTCCCAGAGCTGTGTCTaGATCTCATGCTTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSSQSCV*ISCFFS
Trigger: GGAGAAAAAGCATGAGATTCAGACACAGCTCTGGGA...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAGTCTTTCTATTGCCCTaGCTGTTCATAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITVFLLP*LFIVLG
Trigger: GCCAAGAACTATGAACAGGCAGGGCAATAGAAAGAC...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAATAAAGGTGGCCTGCTaGTCTCCGGCTCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQIKVAC*SPAQGA
Trigger: TGCCCCCTGAGCCGGAGAGCAGCAGGCCACCTTTAT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGAGATAAAGGTGGCCTaGTGCTCTCCGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQEIKVA*CSPAQG
Trigger: CCCCTGAGCCGGAGAGCAGCAGGCCACCTTTATCTC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR GCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGTCTTGCACTGACTaGAAACATTTAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPLSCTD*KHLSNS
Trigger: GCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGACAA...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTTTCTATCAGACCTTTTaGGGAAAGGTGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSFYQTF*GKVVSS
Trigger: GCTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAA...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATACCATTCATTGTGCTaGACATCCTTTCTATCAGAC +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLYHSLC*TSFLSD
Trigger: GTCTGATAGAAAGGATGTCCAGCACAATGAATGGTA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAACTTCCTTGGATTTTGTaGAACAATCTCGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQLPWIL*NNLGPR
Trigger: TCTTGGTCCGAGATTGTTCCACAAAATCCAAGGAAG...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTCTTCCTTGGATTTTGTaGAACAATCTCGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSILPWIL*NNLGPR
Trigger: TCTTGGTCCGAGATTGTTCCACAAAATCCAAGGAAG...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTCATAGGGCTCTTCCTTaGATTTTGTGGAACAATCTC +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIHRALP*ILWNNL
Trigger: GAGATTGTTCCACAAAATCCAAGGAAGAGCCCTATG...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGCCTGTGGCACTATTaGTGCGAGGCCATGACCTGT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQGLWHY*CEAMTC
Trigger: ACAGGTCATGGCCTCGCATCAATAGTGCCACAGGCC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTGTCCATTGCAACCTTaGAATAGTGTGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSICPLQP*NSVYLH
Trigger: ATGCAGATACACACTATTTCAAGGTTGCAATGGACA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAAGACTTGTCTTGCACTaGCTGCAAACATTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQRLVLH*LQTFKQ
Trigger: TTGCTTAAATGTTTGCAGTCAGTGCAAGACAAGTCT...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGTTTTTCTCTGTCTTTaGATGGAAGTCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLVFLCL*MEVHNW
Trigger: CCAATTATGGACTTCCATTCAAAGACAGAGAAAAAC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTGATTCCTTCTTAATGTaGGCCTGGAGCTCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSDSFLM*AWSSSV
Trigger: TACAGAAGAGCTCCAGGCTCACATTAAGAAGGAATC...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATATTTTCGTGAGGGCTaGAGCTGGCTGGAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQYFREG*SWLEAG
Trigger: GCCAGCCTCCAGCCAGCTGCAGCCCTCACGAAAATA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR GCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGTTCTCCTTCATGAATaGCTCTTCCACTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFVLLHE*LFHCLA
Trigger: CGCCAGGCAGTGGAAGAGGCATTCATGAAGGAGAAC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAACCCATAGACTTGTCTTaGACTGACTGCAAACATTTA +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQPIDLS*TDCKHL
Trigger: TAAATGTTTGCAGTCAGTGCAAGACAAGTCTATGGG...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAAGAGAGCTCATTGTCTaGTGTCTTACAAAAGAGATA +
Preference number: 4 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPRELIV*CLTKEI
Trigger: TATCTCTTTTGTAAGACAGCAGACAATGAGCTCTCT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAACTGGAATTTGGGCATaGCAAATCCAAATCATTGAA +
Preference number: 4 (lower is better)
Translates to: AENVPGKMSLHGARQSRLTGIWA*QIQIIE
Trigger: TTCAATGATTTGGATTTGGCATGCCCAAATTCCAGT...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACACATAGGGCTCTTCCTTaGATTTTGTGGAACAATCTC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITHRALP*ILWNNL
Trigger: GAGATTGTTCCACAAAATCCAAGGAAGAGCCCTATG...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGAACATAGCATTGAATaGCATGGCCTCAATGAATCA +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQEHSIE*HGLNES
Trigger: TGATTCATTGAGGCCATGCCATTCAATGCTATGTTC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTCTTGTAGTGTTCGATaGTGTCTTCTACTGAATCAA +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSISCSVR*CLLLNQ
Trigger: TTGATTCAGTAGAAGACATCATCGAACACTACAAGA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGAGGGAGTGGCTGAGTaGGGTGACACTGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQEGVAE*GDTVSC
Trigger: ACAGGAAACAGTGTCACCTCACTCAGCCACTCCCTC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR TCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAATTTTCTCTGTGGTTTaGACTTTCAAAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQIFSVV*TFKTVS
Trigger: ACTCACGGTTTTGAAAGTTCAAACCACAGAGAAAAT...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAGGCATCACTTCACATTaGCCTTGTGAAAGGAGAACA +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGGITSH*PCERRT
Trigger: TGTTCTCCTTTCACAAGGTCAATGTGAAGTGATGCC...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTAATTCCAGTAGAGAATaGCCAGCAACCATACAGCTT +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSNSSRE*PATIQL
Trigger: AAGCTGTATGGTTGCTGGTCATTCTCTACTGGAATT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGAATGCCTCTTCCACTaGCTGGCGGCTGTATTCTCC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQECLFH*LAAVFS
Trigger: GGAGAATACAGCCGCCAGGCAGTGGAAGAGGCATTC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAAACACTCTTGTCTCTTaGTTCTATGTAATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITNTLVS*FYVILC
Trigger: GCAGAGGATTACATAGAACCAAGAGACAAGAGTGTT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTTTTATCAACAGCAATaGTTGAGAGGACTCATAGAC +
Preference number: 4 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIFYQQQ*LRGLID
Trigger: GTCTATGAGTCCTCTCAACCATTGCTGTTGATAAAA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAAAGGGATTAAAACACTaGAATTTGGGCATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQKGLKH*NLGMPN
Trigger: ATTTGGCATGCCCAAATTCCAGTGTTTTAATCCCTT...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATCTTCGGAAGTGTTATaGGAGGCCGAGGAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQSSEVL*EAEEVV
Trigger: TACCACCTCCTCGGCCTCTCATAACACTTCCGAAGA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGAAAGGTGTGTCTCTaGGATAAAGGTGGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQGKVCL*DKGGLL
Trigger: CAGCAGGCCACCTTTATCTCAGAGACACACCTTTCC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATCTTGTAGTGTTCGATaGTGTCTTCTACTGAATCAA +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITSCSVR*CLLLNQ
Trigger: TTGATTCAGTAGAAGACATCATCGAACACTACAAGA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCCTGTCCCTGGCTTGTTaGATTCCAGTAGAGAATGAC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFLSLAC*IPVEND
Trigger: GTCATTCTCTACTGGAATTCAACAAGCCAGGGACAG...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAGCCTCAATGAATCAGTaGGTTGGAGGTATCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGASMNQ*VGGISN
Trigger: ATTACTGATACCTCCAACTCACTGATTCATTGAGGC...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTATGCTAACCCCCACTTaGCATTCACCTATTTTATCA +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSMLTPT*HSPILS
Trigger: TGATAAAATAGGTGAATGTCAAGTGGGGGTTAGCAT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATGCATGCCTCCTCTATaGTCTTTTAAAATCAGTTAC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITCMPPL*SFKISY
Trigger: GTAACTGATTTTAAAAGATCATAGAGGAGGCATGCA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGTTCTCCTTCATGAATaGCTCTTCCACTGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQVLLHE*LFHCLA
Trigger: CGCCAGGCAGTGGAAGAGGCATTCATGAAGGAGAAC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGCTTGTTCATCCTCTaGTACTGGCCTGTGGCACTA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQGLFIL*YWPVAL
Trigger: TAGTGCCACAGGCCAGTACCAGAGGATGAACAAGCC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTAAGCAACAGCTTCTaGTGCCCTTTGCTGCTCGCC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQLSNSF*CPLLLA
Trigger: GGCGAGCAGCAAAGGGCACCAGAAGCTGTTGCTTAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAGACATTCACAATTGCTaGTTTTCCATACCACATTTC +
Preference number: 4 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITDIHNC*FSIPHF
Trigger: GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTC...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTGTCACTGTGAGATTTTaGCCAATGAGGTACAATTTC +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSVTVRF*PMRYNF
Trigger: GAAATTGTACCTCATTGGCCAAAATCTCACAGTGAC...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 72 bp GGCAAAGCAGATTACAATCTGGGCTCTCTTCTCATATaGAGTAAGATCAATAGCTACTTCGAGCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GKADYNLGSLLI*SKINSYFEPLF
Trigger: AAACAGAGGCTCGAAGTAGCTATTGATCTTACTCAATATGAGAAGAGAGCCCAGATTGTAATCTGCTTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
3UTR CAA 72 bp TTCGTATCCAAGCTCCAATTTAAACACTCTTGTCTCTaGGTTCTATGTAATCCTCTGCAGGCATACTCTACG +
Preference number: 4 (lower is better)
Translates to: FVSKLQFKHSCL*VLCNPLQAYST
Trigger: CGTAGAGTATGCCTGCAGAGGATTACATAGAACCAAGAGACAAGAGTGTTTAAATTGGAGCTTGGATACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTAAAATTTTAATCGACTaGCATGTCTCTTCCATCCGA +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSKILID*HVSSIR
Trigger: TCGGATGGAAGAGACATGGCAGTCGATTAAAATTTT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGAGAACAGGGCTGCATaGCTCCTCTATGATCTCTGT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQENRAA*LLYDLC
Trigger: ACAGAGATCATAGAGGAGGCATGCAGCCCTGTTCTC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGATCTCCTTTAATGTTTTaGCTTCTGACGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGSPLMF*LLTSLE
Trigger: TTCCAAGGACGTCAGAAGCCAAAACATTAAAGGAGA...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATCAGGGGGCAAGGGTTaGTACTTCTTCGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQSGGKG*YFFGSV
Trigger: AACACTTCCGAAGAAGTACCAACCCTTGCCCCCTGA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCCATTCTCTGGACTTCTaGAAAGGTGTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFHSLDF*KGVSLR
Trigger: TCTCAGAGACACACCTTTCCAGAAGTCCAGAGAATG...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTAAGGGATTAAAACACTaGAATTTGGGCATGCCAAAT +
Preference number: 4 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSKGLKH*NLGMPN
Trigger: ATTTGGCATGCCCAAATTCCAGTGTTTTAATCCCTT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATCCCTTAAGCTTATCTaGCTGGGCATTCTCTGGACT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQSLKLI*LGILWT
Trigger: AGTCCAGAGAATGCCCAGTCAGATAAGCTTAAGGGA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATGCATGCCTCCTCTATaGTCTCTGTTTTGCACACTG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQCMPPL*SLFCTL
Trigger: CAGTGTGCAAAACAGAGATCATAGAGGAGGCATGCA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAATTTTCTCTGTGGTTTaGACTTTCAAAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGIFSVV*TFKTVS
Trigger: ACTCACGGTTTTGAAAGTTCAAACCACAGAGAAAAT...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAGTTTTTCTCTGTCTTTaGATGGAAGTCCATAATTGG +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGVFLCL*MEVHNW
Trigger: CCAATTATGGACTTCCATTCAAAGACAGAGAAAAAC...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGAGCTCTCTTCTCATATTaGGTAAGATCAATAGCTACT +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGALFSY*VRSIAT
Trigger: AGTAGCTATTGATCTTACTCAATATGAGAAGAGAGC...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAATGGCATGGCCTCAATaGATCAGTGAGTTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQMAWPQ*ISELEV
Trigger: TACCTCCAACTCACTGATTCATTGAGGCCATGCCAT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACCTCAGACATATGCTTaGCTGAAGGCTAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQPQTYA*LKASVG
Trigger: TCCTACACTAGCCTTCAGGCAAGCATATGTCTGAGG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTCATCCTCTGGTACTaGCCTGTGGCACTATTGATG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQFILWY*PVALLM
Trigger: CATCAATAGTGCCACAGGCCAGTACCAGAGGATGAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTTAAGCTTATCTGACTaGGCATTCTCTGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFLSLSD*AFSGLL
Trigger: CAGAAGTCCAGAGAATGCCCAGTCAGATAAGCTTAA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTCTATCAGACCTTTTaGGGAAAGGTGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQFYQTF*GKVVSS
Trigger: GCTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATACGATAGGCTCAGCTaGGTCTCAAAAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQYDRLS*VSKVPA
Trigger: AGCTGGAACTTTTGAGACCCAGCTGAGCCTATCGTA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GGCTACATTCGACAATGGGGTTCATTTGATTCCTCCGTAGTAATTAGAACAGGACTTCTAACTTTGTCCTaGTGTCTGAGTTCTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GYIRQWGSFDSSVVIRTGLLTLS*CLSSRK
Trigger: TTTTCTAGAACTCAGACACCAGGACAAAGTTAGAAG...TCCTGTTCTAATTACTACGGAGGAATCAAATGAACCCCATTGTCGAATGTAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGCTTCCTCTGGTTATaGGGAACTTTTTCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQGFLWL*GTFSAS
Trigger: TGAAGCAGAAAAAGTTCCTCATAACCAGAGGAAGCC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGTTGCTTGTCGTGAATaGAGAACTGCTAATGGCAAG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQVACRE*RTANGK
Trigger: CTTGCCATTAGCAGTTCTTCATTCACGACAAGCAAC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR GCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTTGTCTTGCACTGACTaGAAACATTTAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFLSCTD*KHLSNS
Trigger: GCTGTTGCTTAAATGTTTGCAGTCAGTGCAAGACAA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGGTGACATTCACAATTaGTGGTTTTCCATACCACAT +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFGDIHN*WFSIPH
Trigger: ATGTGGTATGGAAAACCAGCAATTGTGAATGTCACC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR GCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTTTTCCCCTCATTCTTaGTGTCATCTTAAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFFSPHS*CHLKDA
Trigger: AGCATCCTTAAGATGACAGCAAGAATGAGGGGAAAA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACATTCTCTGGACTTCTaGAAAGGTGTGTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQHSLDF*KGVSLR
Trigger: TCTCAGAGACACACCTTTCCAGAAGTCCAGAGAATG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTACCATTCATTGTGCTaGACATCCTTTCTATCAGAC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFYHSLC*TSFLSD
Trigger: GTCTGATAGAAAGGATGTCCAGCACAATGAATGGTA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCAACACTCTTGTCTCTTaGTTCTATGTAATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFNTLVS*FYVILC
Trigger: GCAGAGGATTACATAGAACCAAGAGACAAGAGTGTT...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGAACATAGCATTGAATaGCATGGCCTCAATGAATCA +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFEHSIE*HGLNES
Trigger: TGATTCATTGAGGCCATGCCATTCAATGCTATGTTC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGTCACTGTGAGATTTTaGCCAATGAGGTACAATTTC +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFVTVRF*PMRYNF
Trigger: GAAATTGTACCTCATTGGCCAAAATCTCACAGTGAC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATGGTTTTCTAACAGATaGGTTGATTCAGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQWFSNR*VDSGFL
Trigger: GAGGAAGCCTGAATCAACTCATCTGTTAGAAAACCA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGAACTTTCAAAACCGTaGGTGATTTTCCACTCTCTG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQELSKP*VIFHSL
Trigger: CAGAGAGTGGAAAATCACTCACGGTTTTGAAAGTTC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAAAGGGGAGTGTCCATTaGAACCTTGAAATAGTGTGT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQKGSVH*NLEIVC
Trigger: ACACACTATTTCAAGGTTGCAATGGACACTCCCCTT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR GCA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCATGTACCATTCATTGTaGTGGACATCCTTTCTATCA +
Preference number: 4 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFMYHSL*WTSFLS
Trigger: TGATAGAAAGGATGTCCAGCACAATGAATGGTACAT...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTAAGCTTATCTGACTaGGCATTCTCTGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQLSLSD*AFSGLL
Trigger: CAGAAGTCCAGAGAATGCCCAGTCAGATAAGCTTAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACTGTTTTGCACACTGTaGTTGCTTGTCGTGAATGAA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQLFCTL*LLVVNE
Trigger: TTCATTCACGACAAGCAACCACAGTGTGCAAAACAG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACTTCCTTGGATTTTGTaGAACAATCTCGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQLPWIL*NNLGPR
Trigger: TCTTGGTCCGAGATTGTTCCACAAAATCCAAGGAAG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACATAGGGCTCTTCCTTaGATTTTGTGGAACAATCTC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQHRALP*ILWNNL
Trigger: GAGATTGTTCCACAAAATCCAAGGAAGAGCCCTATG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATGTCCATTGCAACCTTaGAATAGTGTGTATCTGCAT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQCPLQP*NSVYLH
Trigger: ATGCAGATACACACTATTTCAAGGTTGCAATGGACA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGTGACATTCACAATTaGTGGTTTTCCATACCACAT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQGDIHN*WFSIPH
Trigger: ATGTGGTATGGAAAACCAGCAATTGTGAATGTCACC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATCTCCTTTAATGTTTTaGCTTCTGACGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQSPLMF*LLTSLE
Trigger: TTCCAAGGACGTCAGAAGCCAAAACATTAAAGGAGA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATACCATTCATTGTGCTaGACATCCTTTCTATCAGAC +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQYHSLC*TSFLSD
Trigger: GTCTGATAGAAAGGATGTCCAGCACAATGAATGGTA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAACACACATACATAATTaGCTACATTCGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQTHIHN*LHSTMG
Trigger: CCCCATTGTCGAATGTAGCCAATTATGTATGTGTGT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATCTTGTAGTGTTCGATaGTGTCTTCTACTGAATCAA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQSCSVR*CLLLNQ
Trigger: TTGATTCAGTAGAAGACATCATCGAACACTACAAGA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTTCAAAACCGTGAGTaGTTTTCCACTCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQFQNRE*FSTLCY
Trigger: ATAACAGAGAGTGGAAAATCACTCACGGTTTTGAAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR TCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAATTTTCTCTGTGGTTTaGACTTTCAAAACCGTGAGT +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQIFSVV*TFKTVS
Trigger: ACTCACGGTTTTGAAAGTTCAAACCACAGAGAAAAT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAAAAATTTTAATCGACTaGCATGTCTCTTCCATCCGA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQKILID*HVSSIR
Trigger: TCGGATGGAAGAGACATGGCAGTCGATTAAAATTTT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAATGTACCATTCATTGTaGTGGACATCCTTTCTATCA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQMYHSL*WTSFLS
Trigger: TGATAGAAAGGATGTCCAGCACAATGAATGGTACAT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR GCA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAACTGGAATTTGGGCATaGCAAATCCAAATCATTGAA +
Preference number: 4 (lower is better)
Translates to: EINENNGSAESSKPKITQTGIWA*QIQIIE
Trigger: TTCAATGATTTGGATTTGGCATGCCCAAATTCCAGT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATTGTCCCCAGGCTGGATaGGAGTGCAGTGGCGCGATT +
Preference number: 5 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHCPQAG*ECSGAI
Trigger: AATCGCGCCACTGCACTCCAATCCAGCCTGGGGACA...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGCTGCGCCTTCTGGATaGGCCACAGCATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHAAPSG*ATAFAG
Trigger: ACCTGCAAATGCTGTGGCCAATCCAGAAGGCGCAGC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS GCA 90 bp TCTGGACTTCTGGAAAGGTGTGTCTCTGAGATAAAGGTGGCCTGCTaGTCTCCGGCTCAGGGGGCAAGGGTTGGTACTTCTTCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SGLLERCVSEIKVAC*SPAQGARVGTSSEV
Trigger: CACTTCCGAAGAAGTACCAACCCTTGCCCCCTGAGCCGGAGAGCAGCAGGCCACCTTTATCTCAGAGACACACCTTTCCAGAAGTCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS GCA 90 bp TTCTCTGGACTTCTGGAAAGGTGTGTCTCTGAGATAAAGGTGGCCTaGTGCTCTCCGGCTCAGGGGGCAAGGGTTGGTACTTCTTCGGAA +
Preference number: 5 (lower is better)
Translates to: FSGLLERCVSEIKVA*CSPAQGARVGTSSE
Trigger: TTCCGAAGAAGTACCAACCCTTGCCCCCTGAGCCGGAGAGCAGCAGGCCACCTTTATCTCAGAGACACACCTTTCCAGAAGTCCAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS CCA 90 bp AGCTTGTGTATTTATAGGGCAGTATATTTTCGTGAGGGCTGCAGCTaGCTGGAGGCTGGCATCTCTGAGGAGAACAGGGCTGCATGCCTC +
Preference number: 5 (lower is better)
Translates to: SLCIYRAVYFREGCS*LEAGISEENRAACL
Trigger: GAGGCATGCAGCCCTGTTCTCCTCAGAGATGCCAGCCTCCAGCCAGCTGCAGCCCTCACGAAAATATACTGCCCTATAAATACACAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS TCA 90 bp TCTCCGGCTCAGGGGGCAAGGGTTGGTACTTCTTCGGAAGTGTTATaGGAGGCCGAGGAGGTGGTAAAGGAATCTTGTTCTTTCTTACGG +
Preference number: 5 (lower is better)
Translates to: SPAQGARVGTSSEVL*EAEEVVKESCSFLR
Trigger: CCGTAAGAAAGAACAAGATTCCTTTACCACCTCCTCGGCCTCTCATAACACTTCCGAAGAAGTACCAACCCTTGCCCCCTGAGCCGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGAATTTCCCATAGACTaGTCTTGCACTGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHEFPID*SCTDCK
Trigger: TTTGCAGTCAGTGCAAGACAAGTCTATGGGAAATTC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGCTGCGCCTTCTGGATaGGCCACAGCATTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIAAPSG*ATAFAG
Trigger: ACCTGCAAATGCTGTGGCCAATCCAGAAGGCGCAGC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCCAGCAAGTTAGTGGACAGCGTCCAGCTGCGCCTTCTGGATTGGCCACAGCATGTAAAGAGCACAGATTaGGGAATTTCCCATAGACTT +
Preference number: 5 (lower is better)
Translates to: ASKLVDSVQLRLLDWPQHVKSTD*GISHRL
Trigger: AAGTCTATGGGAAATTCCCAAATCTGTGCTCTTTAC...ATGCTGTGGCCAATCCAGAAGGCGCAGCTGGACGCTGTCCACTAACTTGCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTGGCAGTGCAGAGACCTaGGGGCACTGGAAATTAGTA +
Preference number: 5 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIGSAET*GHWKLV
Trigger: TACTAATTTCCAGTGCCCCAAGGTCTCTGCACTGCC...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAAGCTTCTGGTGCCCTTaGCTGCTCGCCTGTATCATG +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITSFWCP*LLACIM
Trigger: CATGATACAGGCGAGCAGCAAAGGGCACCAGAAGCT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTCCTGGGAAGATGAGCTaGCATGGAGCCAGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSPGKMS*HGARQS
Trigger: GCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGG...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATTTCTATCAGACCTTTaGGGGAAAGGTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: AENVPGKMSLHGARQSRLFLSDL*GKGGLQ
Trigger: CTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAAA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGCTCTTCCTTGGATTTaGTGGAACAATCTCGGACCA +
Preference number: 5 (lower is better)
Translates to: AENVPGKMSLHGARQSRLALPWI*WNNLGP
Trigger: TGGTCCGAGATTGTTCCACAAAATCCAAGGAAGAGC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS GCA 90 bp CAAGAAACTACCATCCTTGTTCTCCTTCATGAATGCCTCTTCCACTaGCTGGCGGCTGTATTCTCCAATGTACCATTCATTGTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: QETTILVLLHECLFH*LAAVFSNVPFIVLD
Trigger: GTCCAGCACAATGAATGGTACATTGGAGAATACAGCCGCCAGGCAGTGGAAGAGGCATTCATGAAGGAGAACAAGGATGGTAGTTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCACATACTGTCCCTGGCTaGTTGAATTCCAGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPHTVPG*LNSSRE
Trigger: TTCTCTACTGGAATTCAACAAGCCAGGGACAGTATG...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACTTGAGAACATAGCATaGAATGGCATGGCCTCAATG +
Preference number: 5 (lower is better)
Translates to: AENVPGKMSLHGARQSRLLENIA*NGMASM
Trigger: CATTGAGGCCATGCCATTCAATGCTATGTTCTCAAG...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTAGTGAATTCAGGATGTaGCTGTGGCAGGCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSSEFRM*LWQARG
Trigger: ACCTCTGGCCTGCCACAGCAACATCCTGAATTCACT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTGGCCTGTGGCACTATaGATGCGAGGCCATGACCTG +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFWPVAL*MRGHDL
Trigger: CAGGTCATGGCCTCGCATCAATAGTGCCACAGGCCA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTCAGTCTAGAAGAGGCTaGTTCATCCTCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSQSRRG*FILWYW
Trigger: CCAGTACCAGAGGATGAACAAGCCTCTTCTAGACTG...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATCCTTGGAAATGGGTTaGTCCACTCTTTCCAACCTC +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITSLEMG*STLSNL
Trigger: GAGGTTGGAAAGAGTGGACAAACCCATTTCCAAGGA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTATTTCTAACAGATGAGTaGATTCAGGCTTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: AENVPGKMSLHGARQSRLFLTDE*IQASSG
Trigger: ACCAGAGGAAGCCTGAATCAACTCATCTGTTAGAAA...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATTTCTATCAGACCTTTaGGGGAAAGGTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITFLSDL*GKGGLQ
Trigger: CTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAAA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTCATACTGTCCCTGGCTaGTTGAATTCCAGTAGAGAA +
Preference number: 5 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIHTVPG*LNSSRE
Trigger: TTCTCTACTGGAATTCAACAAGCCAGGGACAGTATG...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTTTTTGCACACTGTGGTaGCTTGTCGTGAATGAAGAA +
Preference number: 5 (lower is better)
Translates to: PNPSNPNHQKQPMSVFSIFCTLW*LVVNEE
Trigger: TTCTTCATTCACGACAAGCAACCACAGTGTGCAAAA...AATGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAAAGGTGGTCTCCAGCTaGTGTATTTATAGGGCAGTA +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITKVVSS*CIYRAV
Trigger: TACTGCCCTATAAATACACAAGCTGGAGACCACCTT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTGCTCTTCCTTGGATTTaGTGGAACAATCTCGGACCA +
Preference number: 5 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSALPWI*WNNLGP
Trigger: TGGTCCGAGATTGTTCCACAAAATCCAAGGAAGAGC...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGTAAAGAGCACAGATTaGGGAATTTCCCATAGACTT +
Preference number: 5 (lower is better)
Translates to: AENVPGKMSLHGARQSRLVKSTD*GISHRL
Trigger: AAGTCTATGGGAAATTCCCAAATCTGTGCTCTTTAC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAAAACACTCTTGTCTCTaGGTTCTATGTAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPKHSCL*VLCNPL
Trigger: CAGAGGATTACATAGAACCAAGAGACAAGAGTGTTT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAATACAGCTTTTAGCTTaGACCGGACCAGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITIQLLA*TGPVSS
Trigger: AGAACTCACTGGTCCGGTCAAAGCTAAAAGCTGTAT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATCTTCTGTAAAGTCCTaGTTTCCATACTGTCCCTGG +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITSSVKS*FPYCPW
Trigger: CCAGGGACAGTATGGAAACAAGGACTTTACAGAAGA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACACTTGAGAACATAGCATaGAATGGCATGGCCTCAATG +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITLENIA*NGMASM
Trigger: CATTGAGGCCATGCCATTCAATGCTATGTTCTCAAG...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCAAATGCTAACCCCCACTaGACATTCACCTATTTTATC +
Preference number: 5 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPNANPH*TFTYFI
Trigger: GATAAAATAGGTGAATGTCAAGTGGGGGTTAGCATT...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATGGCCTGTGGCACTATaGATGCGAGGCCATGACCTG +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQWPVAL*MRGHDL
Trigger: CAGGTCATGGCCTCGCATCAATAGTGCCACAGGCCA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACAAAGAAACTACCATCCTaGTTCTCCTTCATGAATGCC +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITKKLPS*FSFMNA
Trigger: GGCATTCATGAAGGAGAACAAGGATGGTAGTTTCTT...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCAGAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTAGAAATCATCCACACATaGTATATATGTAAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: AENVPGKMSLHGARQSRLEIIHT*YICKAQ
Trigger: TTGGGCCTTACATATATACAATGTGTGGATGATTTC...TAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGGCTCTCTTCTCATATaGAGTAAGATCAATAGCTAC +
Preference number: 5 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQGSLLI*SKINSY
Trigger: GTAGCTATTGATCTTACTCAATATGAGAAGAGAGCC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp CACCCAATCCCTCAAACCCCAATCACCAGAAGCAGCCCATGTCAGTATTTTCCATTAAAACACTGGAATTaGGGCATGCCAAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: HPIPQTPITRSSPCQYFPLKHWN*GMPNPN
Trigger: ATTTGGATTTGGCATGCCCAAATTCCAGTGTTTTAA...TGGAAAATACTGACATGGGCTGCTTCTGGTGATTGGGGTTTGAGGGATTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTGGCTTCTGACGTCCTaGGAAATGGGTTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFWLLTS*EMGLST
Trigger: AGTGGACAAACCCATTTCCAAGGACGTCAGAAGCCA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTATCTCCTTTAATGTTTaGGCTTCTGACGTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSISFNV*ASDVLG
Trigger: TCCAAGGACGTCAGAAGCCAAAACATTAAAGGAGAT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACTCAGGGGGCAAGGGTaGGTACTTCTTCGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQLRGQG*VLLRKC
Trigger: ACACTTCCGAAGAAGTACCAACCCTTGCCCCCTGAG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAGAATGTACCTGGGAAGATGAGCTTGCATGGAGCCAGGCAAAGCAGATTACAAGAAATCATCCACACATaGTATATATGTAAGGCCCAA +
Preference number: 5 (lower is better)
Translates to: ENVPGKMSLHGARQSRLQEIIHT*YICKAQ
Trigger: TTGGGCCTTACATATATACAATGTGTGGATGATTTC...TTGTAATCTGCTTTGCCTGGCTCCATGCAAGCTCATCTTCCCAGGTACATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GCTTTGACCGGACCAGTGAGTTCTTTCGTATCCAAGCTCCAATTTAAACACTCTAAACACTCTTGTCTCTaGGTTCTATGTAATCCTCTG +
Preference number: 5 (lower is better)
Translates to: ALTGPVSSFVSKLQFKHSKHSCL*VLCNPL
Trigger: CAGAGGATTACATAGAACCAAGAGACAAGAGTGTTT...AGAGTGTTTAAATTGGAGCTTGGATACGAAAGAACTCACTGGTCCGGTCAAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AATGACTTAACAGGATGGGGCACTAAGACCCAGACATTACTGCCCAGCATAACATTAAAACACTGGAATTaGGGCATGCCAAATCCAAAT +
Preference number: 5 (lower is better)
Translates to: NDLTGWGTKTQTLLPSITLKHWN*GMPNPN
Trigger: ATTTGGATTTGGCATGCCCAAATTCCAGTGTTTTAA...TGTTATGCTGGGCAGTAATGTCTGGGTCTTAGTGCCCCATCCTGTTAAGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAACAGTCTAGAAGAGGCTaGTTCATCCTCTGGTACTGG +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQQSRRG*FILWYW
Trigger: CCAGTACCAGAGGATGAACAAGCCTCTTCTAGACTG...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATGGCTTCTGACGTCCTaGGAAATGGGTTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQWLLTS*EMGLST
Trigger: AGTGGACAAACCCATTTCCAAGGACGTCAGAAGCCA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATCCTTGGAAATGGGTTaGTCCACTCTTTCCAACCTC +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQSLEMG*STLSNL
Trigger: GAGGTTGGAAAGAGTGGACAAACCCATTTCCAAGGA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGGTGGTAAAGGAATCTaGTTCTTTCTTACGGATGCA +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFGGKGI*FFLTDA
Trigger: TGCATCCGTAAGAAAGAACAAGATTCCTTTACCACC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTTCTATCAGACCTTTaGGGGAAAGGTGGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQFLSDL*GKGGLQ
Trigger: CTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGCTCTTCCTTGGATTTaGTGGAACAATCTCGGACCA +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQALPWI*WNNLGP
Trigger: TGGTCCGAGATTGTTCCACAAAATCCAAGGAAGAGC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCGAATTTCCCATAGACTaGTCTTGCACTGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFEFPID*SCTDCK
Trigger: TTTGCAGTCAGTGCAAGACAAGTCTATGGGAAATTC...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTTAGTTGTCTTTCTATaGCCCTGCCTGTTCATAGTT +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFLVVFL*PCLFIV
Trigger: AACTATGAACAGGCAGGGCAATAGAAAGACAACTAA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000226951.11
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAAAGGTGGTCTCCAGCTaGTGTATTTATAGGGCAGTA +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQKVVSS*CIYRAV
Trigger: TACTGCCCTATAAATACACAAGCTGGAGACCACCTT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAATACAGCTTTTAGCTTaGACCGGACCAGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQIQLLA*TGPVSS
Trigger: AGAACTCACTGGTCCGGTCAAAGCTAAAAGCTGTAT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCTATCAACAGCAATGGTaGAGAGGACTCATAGACATT +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFYQQQW*RGLIDI
Trigger: AATGTCTATGAGTCCTCTCAACCATTGCTGTTGATA...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp AGTTTCTGTCTTCAAGGTGACATTCACAATTGCTGGTTTTCCATACCACATTTCAATGCTAACCCCCACTaGACATTCACCTATTTTATC +
Preference number: 5 (lower is better)
Translates to: SFCLQGDIHNCWFSIPHFNANPH*TFTYFI
Trigger: GATAAAATAGGTGAATGTCAAGTGGGGGTTAGCATT...GAAATGTGGTATGGAAAACCAGCAATTGTGAATGTCACCTTGAAGACAGAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAATCTCCTTTAATGTTTaGGCTTCTGACGTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQISFNV*ASDVLG
Trigger: TCCAAGGACGTCAGAAGCCAAAACATTAAAGGAGAT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAGGTGGTAAAGGAATCTaGTTCTTTCTTACGGATGCA +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQGGKGI*FFLTDA
Trigger: TGCATCCGTAAGAAAGAACAAGATTCCTTTACCACC...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTTCTAACAGATGAGTaGATTCAGGCTTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQFLTDE*IQASSG
Trigger: ACCAGAGGAAGCCTGAATCAACTCATCTGTTAGAAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATTTTGCACACTGTGGTaGCTTGTCGTGAATGAAGAA +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQFCTLW*LVVNEE
Trigger: TTCTTCATTCACGACAAGCAACCACAGTGTGCAAAA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAAAAGAAACTACCATCCTaGTTCTCCTTCATGAATGCC +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQKKLPS*FSFMNA
Trigger: GGCATTCATGAAGGAGAACAAGGATGGTAGTTTCTT...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATATCAACAGCAATGGTaGAGAGGACTCATAGACATT +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQYQQQW*RGLIDI
Trigger: AATGTCTATGAGTCCTCTCAACCATTGCTGTTGATA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000515667.5
CDS-3UTR CAA 90 bp GAAATCAATGAAAACAATGGAAGCGCTGAATCCAGTAAACCAAAGATAACACAATGGAATTTCAAATCGTaGGATCCTTCTTTAGTTGTC +
Preference number: 5 (lower is better)
Translates to: EINENNGSAESSKPKITQWNFKS*DPSLVV
Trigger: GACAACTAAAGAAGGATCCAACGATTTGAAATTCCA...TTGTGTTATCTTTGGTTTACTGGATTCAGCGCTTCCATTGTTTTCATTGATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS CCA 72 bp GGTGGCCTGCTGCTCTCCGGCTCAGGGGGCAAGGGTTaGTACTTCTTCGGAAGTGTTATGAGAGGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: GGLLLSGSGGKG*YFFGSVMRGRG
Trigger: TCCTCGGCCTCTCATAACACTTCCGAAGAAGTACCAACCCTTGCCCCCTGAGCCGGAGAGCAGCAGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS CAA 72 bp AGGTGGCCTGCTGCTCTCCGGCTCAGGGGGCAAGGGTaGGTACTTCTTCGGAAGTGTTATGAGAGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: RWPAALRLRGQG*VLLRKCYERPR
Trigger: CCTCGGCCTCTCATAACACTTCCGAAGAAGTACCAACCCTTGCCCCCTGAGCCGGAGAGCAGCAGGCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS GCA 72 bp CTGGAAAGGTGTGTCTCTGAGATAAAGGTGGCCTGCTaGTCTCCGGCTCAGGGGGCAAGGGTTGGTACTTCT +
Preference number: 6 (lower is better)
Translates to: LERCVSEIKVAC*SPAQGARVGTS
Trigger: AGAAGTACCAACCCTTGCCCCCTGAGCCGGAGAGCAGCAGGCCACCTTTATCTCAGAGACACACCTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS GCA 72 bp CTTCTGGAAAGGTGTGTCTCTGAGATAAAGGTGGCCTaGTGCTCTCCGGCTCAGGGGGCAAGGGTTGGTACT +
Preference number: 6 (lower is better)
Translates to: LLERCVSEIKVA*CSPAQGARVGT
Trigger: AGTACCAACCCTTGCCCCCTGAGCCGGAGAGCAGCAGGCCACCTTTATCTCAGAGACACACCTTTCCAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS GCA 72 bp CTGGAGGCTGGCATCTCTGAGGAGAACAGGGCTGCATaGCTCCTCTATGATCTCTGTTTTGCACACTGTGGT +
Preference number: 6 (lower is better)
Translates to: LEAGISEENRAA*LLYDLCFAHCG
Trigger: ACCACAGTGTGCAAAACAGAGATCATAGAGGAGGCATGCAGCCCTGTTCTCCTCAGAGATGCCAGCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000226951.11
ENST00000442825.6
CDS CCA 72 bp ATTTATAGGGCAGTATATTTTCGTGAGGGCTGCAGCTaGCTGGAGGCTGGCATCTCTGAGGAGAACAGGGCT +
Preference number: 6 (lower is better)
Translates to: IYRAVYFREGCS*LEAGISEENRA
Trigger: AGCCCTGTTCTCCTCAGAGATGCCAGCCTCCAGCCAGCTGCAGCCCTCACGAAAATATACTGCCCTATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS TCA 72 bp CAGGGGGCAAGGGTTGGTACTTCTTCGGAAGTGTTATaGGAGGCCGAGGAGGTGGTAAAGGAATCTTGTTCT +
Preference number: 6 (lower is better)
Translates to: QGARVGTSSEVL*EAEEVVKESCS
Trigger: AGAACAAGATTCCTTTACCACCTCCTCGGCCTCTCATAACACTTCCGAAGAAGTACCAACCCTTGCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS GCA 72 bp GACCAAGAAACTACCATCCTTGTTCTCCTTCATGAATaGCTCTTCCACTGCCTGGCGGCTGTATTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: DQETTILVLLHE*LFHCLAAVFSN
Trigger: ATTGGAGAATACAGCCGCCAGGCAGTGGAAGAGGCATTCATGAAGGAGAACAAGGATGGTAGTTTCTTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS TCA 72 bp CAAAGTTACATGGCTAGGAGATGGCAGGTTTGGGGTTaGGAGGAATGCCTGTCTCCAAAATCCGTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: QSYMARRWQVWG*EECLSPKSVFF
Trigger: AAAGAACACGGATTTTGGAGACAGGCATTCCTCTCAACCCCAAACCTGCCATCTCCTAGCCATGTAACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507719.1
CDS GCA 72 bp TCCTTTATAGGCCGGGCTGGTAAAATTTTAATCGACTaGCATGTCTCTTCCATCCGAAGCTCAGGGTCATCA +
Preference number: 6 (lower is better)
Translates to: SFIGRAGKILID*HVSSIRSSGSS
Trigger: TGATGACCCTGAGCTTCGGATGGAAGAGACATGGCAGTCGATTAAAATTTTACCAGCCCGGCCTATAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS GCA 72 bp ACCATCCTTGTTCTCCTTCATGAATGCCTCTTCCACTaGCTGGCGGCTGTATTCTCCAATGTACCATTCATT +
Preference number: 6 (lower is better)
Translates to: TILVLLHECLFH*LAAVFSNVPFI
Trigger: AATGAATGGTACATTGGAGAATACAGCCGCCAGGCAGTGGAAGAGGCATTCATGAAGGAGAACAAGGATGGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS GCA 72 bp CTGGAGGCTGGCATCTCTGAGGAGAACAGGGCTGCATaGCTCCTCTATGATCTTTTAAAATCAGTTACAGAT +
Preference number: 6 (lower is better)
Translates to: LEAGISEENRAA*LLYDLLKSVTD
Trigger: ATCTGTAACTGATTTTAAAAGATCATAGAGGAGGCATGCAGCCCTGTTCTCCTCAGAGATGCCAGCCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515667.5
CDS CAA 72 bp GATGCATCTCCTTTAATGTTTTGGCTTCTGACGTCCTaGGAAATGGGTTTGTCCACTCTTTCCAACCTCGTC +
Preference number: 6 (lower is better)
Translates to: DASPLMFWLLTS*EMGLSTLSNLV
Trigger: GACGAGGTTGGAAAGAGTGGACAAACCCATTTCCAAGGACGTCAGAAGCCAAAACATTAAAGGAGATGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS CCA 72 bp ACACAGCCAAAACATAGGGCTCTTCCTTGGATTTTGTaGAACAATCTCGGACCAAGAAACTACCATCCTTGT +
Preference number: 6 (lower is better)
Translates to: TQPKHRALPWIL*NNLGPRNYHPC
Trigger: ACAAGGATGGTAGTTTCTTGGTCCGAGATTGTTCCACAAAATCCAAGGAAGAGCCCTATGTTTTGGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS CCA 72 bp CTGGACATCCTTTCTATCAGACCTTTTGGGGAAAGGTaGTCTCCAGCTTGTGTATTTATAGGGCAGTATATT +
Preference number: 6 (lower is better)
Translates to: LDILSIRPFGER*SPACVFIGQYI
Trigger: AATATACTGCCCTATAAATACACAAGCTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAAAGGATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS CCA 72 bp ATTCATTGTGCTGGACATCCTTTCTATCAGACCTTTTaGGGAAAGGTGGTCTCCAGCTTGTGTATTTATAGG +
Preference number: 6 (lower is better)
Translates to: IHCAGHPFYQTF*GKVVSSLCIYR
Trigger: CCTATAAATACACAAGCTGGAGACCACCTTTCCCCAAAAGGTCTGATAGAAAGGATGTCCAGCACAATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS CAA 72 bp AAAACACAGCCAAAACATAGGGCTCTTCCTTGGATTTaGTGGAACAATCTCGGACCAAGAAACTACCATCCT +
Preference number: 6 (lower is better)
Translates to: KTQPKHRALPWI*WNNLGPRNYHP
Trigger: AGGATGGTAGTTTCTTGGTCCGAGATTGTTCCACAAAATCCAAGGAAGAGCCCTATGTTTTGGCTGTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS CAA 90 bp TGTTCTCATAAAACACAGCCAAAACATAGGGCTCTTCCTTGGATTTaGTGGAACAATCTCGGACCAAGAAACTACCATCCTTGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: CSHKTQPKHRALPWI*WNNLGPRNYHPCSP
Trigger: AGGAGAACAAGGATGGTAGTTTCTTGGTCCGAGATTGTTCCACAAAATCCAAGGAAGAGCCCTATGTTTTGGCTGTGTTTTATGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000515667.5
CDS CAA 90 bp TTCTGGAATTTCAAATCGTTGGATCCTTCTTTAGTTGTCTTTCTATaGCCCCTTGTCCAAAGTTACATGGCTAGGAGATGGCAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: FWNFKSLDPSLVVFL*PLVQSYMARRWQVW
Trigger: CCAAACCTGCCATCTCCTAGCCATGTAACTTTGGACAAGGGGCAATAGAAAGACAACTAAAGAAGGATCCAACGATTTGAAATTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507719.1
CDS TCA 72 bp TGGTGTCTAACGGAAGGGGAGTGTCCATTGCAACCTTaGAATAGTGTGTATCTGCATATTCAGATTCCTTTA +
Preference number: 6 (lower is better)
Translates to: WCLTEGECPLQP*NSVYLHIQIPL
Trigger: TAAAGGAATCTGAATATGCAGATACACACTATTTCAAGGTTGCAATGGACACTCCCCTTCCGTTAGACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1
CDS CAA 72 bp AGTGTTATGAGAGGCCGAGGAGGTGGTAAAGGAATCTaGTTCTTTCTTACGGATGCATCTCCTTTAATGTTT +
Preference number: 6 (lower is better)
Translates to: SVMRGRGGGKGI*FFLTDASPLMF
Trigger: AAACATTAAAGGAGATGCATCCGTAAGAAAGAACAAGATTCCTTTACCACCTCCTCGGCCTCTCATAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000226951.11
ENST00000442825.6
ENST00000507719.1