RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000102805

Ensembl transcript IDs: ENST00000377453.9, ENST00000485938.4, ENST00000616833.6, ENST00000635905.1, ENST00000635915.1, ENST00000635989.1, ENST00000636183.2, ENST00000636405.1, ENST00000636520.1, ENST00000636525.2, ENST00000636602.1, ENST00000636681.1, ENST00000636705.1, ENST00000636767.2, ENST00000636780.2, ENST00000637278.1, ENST00000637397.2, ENST00000637537.2

Found 1083 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGC +
Preference number: 1 (lower is better)
Translates to: VRRCLFTQTCLQPCS*IPRLEEPLKHYAIS
Trigger: GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR TCA 90 bp CCAGCCAGCCCAGGCTTCAGAATTCAGCTCAGATGTGATCTTTGTTaGCCTGCCTGTCAACGTAGGAGAAGGGAACTTCTCCTTTCTGGT +
Preference number: 1 (lower is better)
Translates to: PASPGFRIQLRCDLC*PACQRRRRELLLSG
Trigger: ACCAGAAAGGAGAAGTTCCCTTCTCCTACGTTGACAGGCAGGTCAACAAAGATCACATCTGAGCTGAATTCTGAAGCCTGGGCTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 90 bp TTATTTCCTCACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCTAAAAGCCTGTACTATAGTGCATCC +
Preference number: 1 (lower is better)
Translates to: LFPHRPVTSGWQALV*GPHFGAKSLYYSAS
Trigger: GGATGCACTATAGTACAGGCTTTTAGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR TCA 90 bp GTCTGTGCTTCCTGGCTTCATAGTGTACAAGGTCCTTTTGTATCTTaGCCTCCACCTGTCTCTTGCTGGTCACTCACGTGGAGCTTTTAC +
Preference number: 1 (lower is better)
Translates to: VCASWLHSVQGPFVS*PPPVSCWSLTWSFY
Trigger: GTAAAAGCTCCACGTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACACTATGAAGCCAGGAAGCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 90 bp TTAACAGAAACCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAAT +
Preference number: 1 (lower is better)
Translates to: LTETCPLSEKCNLFH*ADSFVGRGRTTGNN
Trigger: ATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGGTTTCTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR GCA 90 bp ACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTaGAATGAAGAAAGAGTAATTCACGCAGAGCCGGCTGTGTGGGAG +
Preference number: 1 (lower is better)
Translates to: TLSVAQTEPIYQDGN*NEERVIHAEPAVWE
Trigger: CTCCCACACAGCCGGCTCTGCGTGAATTACTCTTTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 90 bp TACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTaGTACGTTTCTTTCTTCCCTGTACTTGGAGTTGCTGGGATGCTG +
Preference number: 1 (lower is better)
Translates to: YCYENKHHTPSTLCV*YVSFFPVLGVAGML
Trigger: CAGCATCCCAGCAACTCCAAGTACAGGGAAGAAAGAAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 90 bp GGGAATTGCAATGAAGAAAGAGTAATTCACGCAGAGCCGGCTGTGTaGGAGACTAGAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGC +
Preference number: 1 (lower is better)
Translates to: GNCNEERVIHAEPAV*ETRVLLLLKSVFPS
Trigger: GCTCGGGAAGACTGATTTGAGTAATAACAAAACTCTAGTCTCCCACACAGCCGGCTCTGCGTGAATTACTCTTTCTTCATTGCAATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 90 bp TTCCATTTTAGATGGAGATTGCTTGCTCATTCTCCCAAGTCTCCTTaGTCATTCTCTTTTCTCCCACAGGAGACTCCTGGTGATGAGAAT +
Preference number: 1 (lower is better)
Translates to: FHFRWRLLAHSPKSP*SFSFLPQETPGDEN
Trigger: ATTCTCATCACCAGGAGTCTCCTGTGGGAGAAAAGAGAATGAGCAAGGAGACTTGGGAGAATGAGCAAGCAATCTCCATCTAAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 90 bp GACCTCCACCTGTCTCTTGCTGGTCACTCACGTGGAGCTTTTACTTaGGTCCTATGGAACTACAGATTTTTGTTTGTTACCTTTGTTTGT +
Preference number: 1 (lower is better)
Translates to: DLHLSLAGHSRGAFT*VLWNYRFLFVTFVC
Trigger: ACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACGTGAGTGACCAGCAAGAGACAGGTGGAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 90 bp ATGACGAAGATGCTGGAAACACTTTGGCCAGCCTGTTTGCCTTTGTaGACAGGGAAAAAGCATGTGTGTAGTTTTGGAACATCACTCTTT +
Preference number: 1 (lower is better)
Translates to: MTKMLETLWPACLPL*TGKKHVCSFGTSLF
Trigger: AAAGAGTGATGTTCCAAAACTACACACATGCTTTTTCCCTGTTCACAAAGGCAAACAGGCTGGCCAAAGTGTTTCCAGCATCTTCGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR TCA 90 bp TCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATaGTTCCATTTTAGATGGAGATTGCTTGCTCATTCTCCCAAGTCT +
Preference number: 1 (lower is better)
Translates to: SNLLAIAKGQPSPKK*FHFRWRLLAHSPKS
Trigger: AGACTTGGGAGAATGAGCAAGCAATCTCCATCTAAAATGGAATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 90 bp AGGAAAAGCAGAATGGGCAAAGACAGTGTAAGGAAAATGGAGGTGTaGGAAATGTGGAGCTTCACTGTTGCAAAGCATGCTACACATAAA +
Preference number: 1 (lower is better)
Translates to: RKSRMGKDSVRKMEV*EMWSFTVAKHATHK
Trigger: TTTATGTGTAGCATGCTTTGCAACAGTGAAGCTCCACATTTCCCACACCTCCATTTTCCTTACACTGTCTTTGCCCATTCTGCTTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 90 bp CTGTCTCTTGCTGGTCACTCACGTGGAGCTTTTACTTGGGTCCTATaGAACTACAGATTTTTGTTTGTTACCTTTGTTTGTGGTTGCTCA +
Preference number: 1 (lower is better)
Translates to: LSLAGHSRGAFTWVL*NYRFLFVTFVCGCS
Trigger: TGAGCAACCACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACGTGAGTGACCAGCAAGAGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 90 bp TACATCCAGCTCTTTGACCTTGAGAGGCAAGTAAGTCATGTTACCTaGCTGAGCCTCAATTCCTTATTTGCAGAGAATGAGTATCTTATC +
Preference number: 1 (lower is better)
Translates to: YIQLFDLERQVSHVT*LSLNSLFAENEYLI
Trigger: GATAAGATACTCATTCTCTGCAAATAAGGAATTGAGGCTCAGCCAGGTAACATGACTTACTTGCCTCTCAAGGTCAAAGAGCTGGATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR GCA 90 bp AAAAGACTATACATTGGGTACAGTGTACACTGCTCGGGTGATGGGTaGGCAAAAATCTCAGAAATCACCACTAAAGAACTTATTCATGTA +
Preference number: 1 (lower is better)
Translates to: KRLYIGYSVHCSGDG*AKISEITTKELIHV
Trigger: TACATGAATAAGTTCTTTAGTGGTGATTTCTGAGATTTTTGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGTATAGTCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR CCA 90 bp TGCTTCATAAATCATATGGACAAGCTCCTTACTTCTCAAATGCTATaGTATATTGTCTCCATTTTGCACATGAGGCAACGGGCCAATAAG +
Preference number: 1 (lower is better)
Translates to: CFINHMDKLLTSQML*YIVSILHMRQRANK
Trigger: CTTATTGGCCCGTTGCCTCATGTGCAAAATGGAGACAATATACCATAGCATTTGAGAAGTAAGGAGCTTGTCCATATGATTTATGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 90 bp CAAATATTCAGAAAACACTACTCTGCATGGTTACAACTCTCATCTTaGGCATTTATAATGCCTAATAGAACTGGGCCCCAAACACTGCAT +
Preference number: 1 (lower is better)
Translates to: QIFRKHYSAWLQLSS*AFIMPNRTGPQTLH
Trigger: ATGCAGTGTTTGGGGCCCAGTTCTATTAGGCATTATAAATGCCCAAGATGAGAGTTGTAACCATGCAGAGTAGTGTTTTCTGAATATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR TCA 90 bp GGCAGATTTCTGCGTGGCTATGTTTTGGTTTCTCAACTACTATTTTaGAAGCATGTTCTTGAATCATCTTCACCTGAAAGCTCTACATCT +
Preference number: 1 (lower is better)
Translates to: GRFLRGYVLVSQLLF*KHVLESSSPESSTS
Trigger: AGATGTAGAGCTTTCAGGTGAAGATGATTCAAGAACATGCTTTCAAAATAGTAGTTGAGAAACCAAAACATAGCCACGCAGAAATCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR CCA 90 bp TTTCCCTGCATAACCAAGTTCTTTGATTTGCAGTTGACCAAAACTTaGTACAAGAATCTTTGTCTCTTCAAGGCAGTTCTGGAAATCCAA +
Preference number: 1 (lower is better)
Translates to: FPCITKFFDLQLTKT*YKNLCLFKAVLEIQ
Trigger: TTGGATTTCCAGAACTGCCTTGAAGAGACAAAGATTCTTGTACCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATGCAGGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR CCA 90 bp TTGGGTCCTATGGAACTACAGATTTTTGTTTGTTACCTTTGTTTGTaGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTCAAATGT +
Preference number: 1 (lower is better)
Translates to: LGPMELQIFVCYLCL*LLSTLYPVEYLLKC
Trigger: ACATTTGAGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 90 bp GTGGTTTCAACTCATATCTTAGCTCCGATTGAGAGCTGCATACTTTaGGAATGCTTTAATTCCTGTTTGCCTACATTGATTCCTTTAGAT +
Preference number: 1 (lower is better)
Translates to: VVSTHILAPIESCIL*ECFNSCLPTLIPLD
Trigger: ATCTAAAGGAATCAATGTAGGCAAACAGGAATTAAAGCATTCTCAAAGTATGCAGCTCTCAATCGGAGCTAAGATATGAGTTGAAACCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATaGAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGA +
Preference number: 1 (lower is better)
Translates to: RISASLQEKSPEMLI*SNSADVHFNFMHQG
Trigger: TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR CCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATaGTGTCTAAACGAATGTCTAAAGTTAGGTGAATGGAATGTAATC +
Preference number: 1 (lower is better)
Translates to: LTLDLPHLEAQSLQL*CLNECLKLGEWNVI
Trigger: GATTACATTCCATTCACCTAACTTTAGACATTCGTTTAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR TCA 90 bp AGGTACAGATATCCTCATTTGTTTTCCCTGCATAACCAAGTTCTTTaGTTTGCAGTTGACCAAAACTTGGTACAAGAATCTTTGTCTCTT +
Preference number: 1 (lower is better)
Translates to: RYRYPHLFSLHNQVL*FAVDQNLVQESLSL
Trigger: AAGAGACAAAGATTCTTGTACCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATGCAGGGAAAACAAATGAGGATATCTGTACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR GCA 90 bp GTCCTATGGAACTACAGATTTTTGTTTGTTACCTTTGTTTGTGGTTaGTCAGTACACTTTACCCTGTGGAATACTTGCTCAAATGTTTTA +
Preference number: 1 (lower is better)
Translates to: VLWNYRFLFVTFVCG*SVHFTLWNTCSNVL
Trigger: TAAAACATTTGAGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 90 bp GTAAAGAGCTATACAAATAGGAAGCATGATTACTTCCTCAAGTCCTaGGGTTCACTGAATAATTATTGTCACAACAGTGCTTTCATTTCA +
Preference number: 1 (lower is better)
Translates to: VKSYTNRKHDYFLKS*GSLNNYCHNSAFIS
Trigger: TGAAATGAAAGCACTGTTGTGACAATAATTATTCAGTGAACCCCAGGACTTGAGGAAGTAATCATGCTTCCTATTTGTATAGCTCTTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR TCA 90 bp GCAGTGGTGCGATCTTGGCTCGTGGGAACCTCCACCTCCTGGATTCAAGTGATTTGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCT +
Preference number: 2 (lower is better)
Translates to: AVVRSWLVGTSTSWIQVIWQALV*GPHFGA
Trigger: AGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCA...AATCACTTGAATCCAGGAGGTGGAGGTTCCCACGAGCCAAGATCGCACCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR TCA 90 bp GCAGTGGTGCGATCTTGGCTCGTGGGAACCTCCACCTCCTGGATTCAAGTGATTACTCCTGACCTCAAGTaGTCCGTCCACCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: AVVRSWLVGTSTSWIQVITPDLK*SVHLGL
Trigger: GAGGCCAAGGTGGACGGATCACTTGAGGTCAGGAGT...AATCACTTGAATCCAGGAGGTGGAGGTTCCCACGAGCCAAGATCGCACCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR TCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEAPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGTGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: PVLSRRSATSSTALTALWCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTCTGGGCCCCAAACACTaGATCCTGTCACTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSLGPKH*ILSLCA
Trigger: TGCACACAGTGACAGGATGCAGTGTTTGGGGCCCAG...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 2 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 2 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 2 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPREEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 2 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR CAA 90 bp GTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAA +
Preference number: 2 (lower is better)
Translates to: VLSRRSATSSTALTA*WEEGELQETMKKSE
Trigger: TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAACCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 2 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 2 (lower is better)
Translates to: PVLSRRSATSSTALTALWVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635915.1
3UTR-3UTR TCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GTTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: VNTGFATSRSTITPVMVSPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...AGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAATGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACTTGCCAGGAGCAATTTaGGGAGGTTCAGACTCTTGG +
Preference number: 2 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHLPGAI*GGSDSW
Trigger: CCAAGAGTCTGAACCTCCCCAAATTGCTCCTGGCAA...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 90 bp ATCCCACTTAATTGTGGGATCCGCCCAATGGGTTCACCTTGTCCGTaGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAG +
Preference number: 2 (lower is better)
Translates to: IPLNCGIRPMGSPCP*PRQNRFIKMGIAMK
Trigger: CTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGGATCCCACAATTAAGTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 90 bp AGAGTAAAGTCTGTGCTTCCTGGCTTCATAGTGTACAAGGTCCTTTaGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACGTGGA +
Preference number: 2 (lower is better)
Translates to: RVKSVLPGFIVYKVL*YLDLHLSLAGHSRG
Trigger: TCCACGTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACACTATGAAGCCAGGAAGCACAGACTTTACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 2 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEALSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp CCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 2 (lower is better)
Translates to: PRSPNSLTLANIVRISASKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...AGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR TCA 90 bp ACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAGGGCTTGGGAAGTGCTaGTTGGTCAGTTTGGAGATG +
Preference number: 2 (lower is better)
Translates to: TLSVAQTEPIYQDGNCNEGLGKC*LVSLEM
Trigger: CATCTCCAAACTGACCAATCAGCACTTCCCAAGCCC...TTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR GCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 2 (lower is better)
Translates to: SAAMFLHTPVRRTAEALCPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...GCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 2 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: FLKSGHTISICRTLGPKVIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 2 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635915.1
3UTR-3UTR CCA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 2 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: AAMFLHTPVRRTAEALCYSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...ATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEAMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: FLKSGHTISICRTLGPKVLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAACTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCTGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGTGCTCGGGTGATGGGTaGGCAAAAATCTCAGAAATC +
Preference number: 2 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWCSGDG*AKISEI
Trigger: GATTTCTGAGATTTTTGCGCACCCATCACCCGAGCA...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR GCA 90 bp AGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: RTTGNNEEVRRCLFTQTCIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTGATGACCTCTCCACCTaGCACGTTAAGTCCTTCCAA +
Preference number: 2 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFDDLST*HVKSFQ
Trigger: TTGGAAGGACTTAACGTGGCAGGTGGAGAGGTCATC...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTCAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 2 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 2 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp AGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGGAATGCATTTGCAGCAACCTaGAATAATGGTCTCCAATTC +
Preference number: 2 (lower is better)
Translates to: RYWRDVGEREHFFSAARNAFAAT*NNGLQF
Trigger: GAATTGGAGACCATTATTCCAGGTTGCTGCAAATGC...ATTCCTAGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR CCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATTGGCAGGTAGGGGCTTaGGAAGTGCTGATTGGTCAG +
Preference number: 2 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDWQVGA*EVLIGQ
Trigger: CTGACCAATCAGCACTTCCCAAGCCCCTACCTGCCA...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGTGCTGGTCACTCACGTaGAGCTTTTACTTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKCWSLT*SFYLGP
Trigger: AGGACCCAAGTAAAAGCTCCACGTGAGTGACCAGCA...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 90 bp ACACTTTACCCTGTGGAATACTTGCTCAAATGTTTTAACTTCCCCTaGCTAACTCCAGCCAGCCCAGGCTTCAGAATTCAGCTCAGATGT +
Preference number: 2 (lower is better)
Translates to: TLYPVEYLLKCFNFP*LTPASPGFRIQLRC
Trigger: ACATCTGAGCTGAATTCTGAAGCCTGGGCTGGCTGGAGTTAGCAAGGGGAAGTTAAAACATTTGAGCAAGTATTCCACAGGGTAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp TCTGTACTTATTTCCTCACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTGCAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 2 (lower is better)
Translates to: SVLISSQTSNIWLAGTGLQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...CAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 2 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCILSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 2 (lower is better)
Translates to: LKPRSPNSLTLANIVRISKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR TCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGACTCTCCACTGAACCGTaGGTTAACATACCTCCAAAT +
Preference number: 2 (lower is better)
Translates to: MGKGVNWPGMKERTANDGLSTEP*VNIPPN
Trigger: ATTTGGAGGTATGTTAACTCACGGTTCAGTGGAGAG...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR GCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTATGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 2 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: AAILLMCILTLCTKEERLIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GATTCCTTTAGATCAAATCCTGTCCAACAGATATATAACGTGTGTGTGTGTATGCCTCCACCTGTCTCTTaGTGGTCACTCACGTGGAGC +
Preference number: 2 (lower is better)
Translates to: DSFRSNPVQQIYNVCVCMPPPVS*WSLTWS
Trigger: GCTCCACGTGAGTGACCAGCAAGAGACAGGTGGAGG...CATACACACACACACGTTATATATCTGTTGGACAGGATTTGATCTAAAGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTGTTCATACTCCAGGATaGCTAACCCTCTCTTCTACC +
Preference number: 2 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFVHTPG*LTLSST
Trigger: GGTAGAAGAGAGGGTTAGCCATCCTGGAGTATGAAC...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CAA 90 bp TACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTaGCTCAAATGTTTTAACTTCCCCTTGCTAACTCCAGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: YLCLWLLSTLYPVEY*LKCFNFPLLTPASP
Trigger: TGGGCTGGCTGGAGTTAGCAAGGGGAAGTTAAAACATTTGAGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: ALTALWEEGELQETMKKSSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp GATCCTTCCACCACCTCAGTTTCGCAAAGTGATAGGATTACAGGCGTAAGCCACCATAACCAAGTTCTTTaGTTTGCAGTTGACCAAAAC +
Preference number: 2 (lower is better)
Translates to: DPSTTSVSQSDRITGVSHHNQVL*FAVDQN
Trigger: GTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATG...GTGGCTTACGCCTGTAATCCTATCACTTTGCGAAACTGAGGTGGTGGAAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR TCA 90 bp AGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGGAATATGCCCATCAATCAATaGGTGGATAAAGAAAATGTG +
Preference number: 2 (lower is better)
Translates to: RYWRDVGEREHFFSAARNMPINQ*VDKENV
Trigger: CACATTTTCTTTATCCACTCATTGATTGATGGGCAT...ATTCCTAGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR TCA 90 bp TCATCTTGGGCATTTATAATGCCTAATAGAACTGGGCCCCAAACACTGCATCCTCCTCAGTTTTATTCCTaGTTCTGCTACATCCAGCTC +
Preference number: 2 (lower is better)
Translates to: SSWAFIMPNRTGPQTLHPPQFYS*FCYIQL
Trigger: GAGCTGGATGTAGCAGAATCAGGAATAAAACTGAGG...AGGATGCAGTGTTTGGGGCCCAGTTCTATTAGGCATTATAAATGCCCAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR TCA 90 bp TTGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTTCCTGGCCAACATGGTaGAAGCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LLPLFVVAQYTLPCGILASWPTW*KPVSTK
Trigger: TTTAGTAGAGACGGGCTTTCACCATGTTGGCCAGGA...AGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACAGATGGGAATTGCAATaGAGAAAGAGTAATTCACGC +
Preference number: 2 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHRWELQ*RKSNSR
Trigger: GCGTGAATTACTCTTTCTTCATTGCAATTCCCATCT...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp GATTCCTTTAGATCAAATCCTGTCCAACAGATATATAACGTGTGTGTGTGTATGGAGGAAAGGACAGTATaGGGTCAGCCTGAGGTGCTC +
Preference number: 2 (lower is better)
Translates to: DSFRSNPVQQIYNVCVCMEERTV*GQPEVL
Trigger: GAGCACCTCAGGCTGACCTCATACTGTCCTTTCCTC...CATACACACACACACGTTATATATCTGTTGGACAGGATTTGATCTAAAGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR GCA 90 bp AGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGGAATAGCACAATTTGCAACTaGAAAAATATGGAACCAGCT +
Preference number: 2 (lower is better)
Translates to: RYWRDVGEREHFFSAARNSTICN*KNMEPA
Trigger: AGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCT...ATTCCTAGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR GCA 90 bp GCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: AAMFLHTPVRRTAEALCYFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...ATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATCAACCTTCTTGCCATTaGCAAAGGTCAGCCTTCTCC +
Preference number: 2 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDQPSCH*QRSAFS
Trigger: GGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTG...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATCTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 2 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp CCTGACTTCATTACTACTAGCTGGATAGCCAGAGAAAGATCACTTAGCCTTTCTCTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 2 (lower is better)
Translates to: PDFITTSWIARERSLSLSLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...AGAAAGGCTAAGTGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAAGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 2 (lower is better)
Translates to: ALTALWEEGELQETMKKSVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LTALWEEGELQETMKKSENYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGGAGCCAGAGGCTTCATaGCCCCCACATTGTAATTTC +
Preference number: 2 (lower is better)
Translates to: FLFLLTSGFSDLETLILREPEAS*PPHCNF
Trigger: GAAATTACAATGTGGGGGTCATGAAGCCTCTGGCTC...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATCTTCTCCTTTCTGGTTaGGATTTCCTACCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDLLLSG*DFLPVY
Trigger: ATACACAGGTAGGAAATCTCAACCAGAAAGGAGAAG...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR GCA 90 bp AGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 2 (lower is better)
Translates to: RTTGNNEEVRRCLFTQTCEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 2 (lower is better)
Translates to: KVFLKSGHTISICRTLGPEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGACAACAATGCAGCACTTaGAACACAATTCCAACTTTC +
Preference number: 2 (lower is better)
Translates to: MGKGVNWPGMKERTANDGQQCST*NTIPTF
Trigger: GAAAGTTGGAATTGTGTTGCAAGTGCTGCATTGTTG...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR GCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATACCTTTGTTTGTGGTTaGTCAGTACACTTTACCCTG +
Preference number: 2 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDTFVCG*SVHFTL
Trigger: CAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGT...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp CAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 2 (lower is better)
Translates to: QETMKKSEGACLPKRVCSFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...GCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTACCCACTTTGCCATTTaGTTGAACATGTTTCCTGCA +
Preference number: 2 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSTHFAI*LNMFPA
Trigger: TGCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616833.6
3UTR-3UTR CCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGGGAACTTCTCCTTTCTaGTTGAGATTTCCTACCTGT +
Preference number: 2 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKGTSPF*LRFPTC
Trigger: ACAGGTAGGAAATCTCAACCAGAAAGGAGAAGTTCC...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 90 bp ACTTGGATAATAAAGGGTAAATATGACGAAGATGCTGGAAACACTTaGGCCAGCCTGTTTGCCTTTGTGAACAGGGAAAAAGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: TWIIKGKYDEDAGNT*ASLFAFVNREKACV
Trigger: CACACATGCTTTTTCCCTGTTCACAAAGGCAAACAGGCTGGCCAAAGTGTTTCCAGCATCTTCGTCATATTTACCCTTTATTATCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR CAA 90 bp CACGTGGAGCTTTTACTTGGGTCCTATGGAACTACAGATTTTTGTTaGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGA +
Preference number: 2 (lower is better)
Translates to: HVELLLGSYGTTDFC*LPLFVVAQYTLPCG
Trigger: TCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: FLKSGHTISICRTLGPKVTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: FLKSGHTISICRTLGPKVSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTAGTCCTGGGGTTCACTaGATAATTATTGTCACAACA +
Preference number: 2 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFSPGVH*IIIVTT
Trigger: TGTTGTGACAATAATTATTCAGTGAACCCCAGGACT...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR GCA 90 bp GACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: DSFVGRGRTTGNNEEVRRVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...CCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp TCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAAGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SCIPRLEEPLKHYAISLKVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...TTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAACCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 2 (lower is better)
Translates to: LTALWEEGELQETMKKSEPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAACTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 2 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 2 (lower is better)
Translates to: ALTALWEEGELQETMKKSSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 2 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp AAACCAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGAATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: KPRVLFPVGPKTDVSFPRISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...TCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CCA 90 bp TGGAAATGTTTTAGGCCGAGTTCATACTCCAGGATGGCTAACCCTCTCTTCTACTACTTCCTCAAGTCCTaGGGTTCACTGAATAATTAT +
Preference number: 2 (lower is better)
Translates to: WKCFRPSSYSRMANPLFYYFLKS*GSLNNY
Trigger: ATAATTATTCAGTGAACCCCAGGACTTGAGGAAGTA...GTAGAAGAGAGGGTTAGCCATCCTGGAGTATGAACTCGGCCTAAAACATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR TCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: KVFLKSGHTISICRTLGPSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTAAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 2 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636681.1
3UTR-3UTR TCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTCTAATTTGGGAACCATaGATGGAGCTAATGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSLIWEP*MELMER
Trigger: TCTTTCCATTAGCTCCATTCATGGTTCCCAAATTAG...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636767.2
3UTR-3UTR GCA 90 bp CCTGACTTCATTACTACTAGCTGGATAGCCAGAGAAAGATCACTTAGCCTTTCTCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 2 (lower is better)
Translates to: PDFITTSWIARERSLSLSPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...AGAAAGGCTAAGTGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAAGTCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTTCTTCAACTTTCAAATaGCACCACTATCCTTATGAG +
Preference number: 2 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFSSTFK*HHYPYE
Trigger: CTCATAAGGATAGTGGTGGCATTTGAAAGTTGAAGA...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 2 (lower is better)
Translates to: RTLKACLALIKAQLLGDLVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTCCATCAATCAATGAGTaGATAAAGAAAATGTGGTGT +
Preference number: 2 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAPSINE*IKKMWC
Trigger: ACACCACATTTTCTTTATCCACTCATTGATTGATGG...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR CCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTCTATGGAAAACAGTGTaGAGATTCCTTAAAGAACTA +
Preference number: 2 (lower is better)
Translates to: KNRYWRDVGEREHFFSAALWKTV*RFLKEL
Trigger: TAGTTCTTTAAGGAATCTCCACACTGTTTTCCATAG...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR CCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 2 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 2 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATGTACACTTTACCCTGTaGAATACTTGCTCAAATGTT +
Preference number: 2 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDVHFTL*NTCSNV
Trigger: AACATTTGAGCAAGTATTCCACAGGGTAAAGTGTAC...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTAACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATGTTGAACATGTTTCCTaGTATAGTTGCTACTTGAAC +
Preference number: 2 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNVEHVS*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGGAAACATGTTCAAC...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR TCA 90 bp AAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGACTTTTGTGGTTTAAGGCACATTaGTTAGAAAGTAGCAGGAAA +
Preference number: 2 (lower is better)
Translates to: KGVNWPGMKERTANDGLLWFKAH*LESSRK
Trigger: TTTCCTGCTACTTTCTAATCAATGTGCCTTAAACCA...CAAAAGTCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR TCA 90 bp ACCACTGCCTGTTATAAAACAGAAGTTAAGAATAGGCTTTGGCAGTTAGTTCTTAATTCAGCTCAGATGTaGTCTTTGTTGACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: TTACYKTEVKNRLWQLVLNSAQM*SLLTCL
Trigger: CAGGCAGGTCAACAAAGATCACATCTGAGCTGAATT...AAGAACTAACTGCCAAAGCCTATTCTTAACTTCTGTTTTATAACAGGCAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR GCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: RTLKACLALIKAQLLGDLVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp ACCAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATACTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 2 (lower is better)
Translates to: TKSLVSCWPKNRCFISQILFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...TATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGCTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 2 (lower is better)
Translates to: QESCFLLAQKQMFHFPDKLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...CTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 2 (lower is better)
Translates to: QESCFLLAQKQMFHFPDKGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...CTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCACTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 2 (lower is better)
Translates to: MLVCLKNTSQLLASSKISLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 2 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp GTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTGCCATTTGATCCAGCAATCGCAACTGCAAAAATATaGAACCAGCTCAAATGCCCA +
Preference number: 2 (lower is better)
Translates to: VWRFLKELKVELPFDPAIATAKI*NQLKCP
Trigger: TGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGC...GATTGCTGGATCAAATGGCAGTTCTACTTTTAGTTCTTTAAGGAATCTCCACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR CCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 2 (lower is better)
Translates to: LTALWEEGELQETMKKSESLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TCATCTTGGGCATTTATAATGCCTAATAGAACTGGGCCCCAAACACTGCATCCTGGACTTTTGTATTGTTaGTATGGTTTAAGGCACATT +
Preference number: 2 (lower is better)
Translates to: SSWAFIMPNRTGPQTLHPGLLYC*YGLRHI
Trigger: AATGTGCCTTAAACCATACCAACAATACAAAAGTCC...AGGATGCAGTGTTTGGGGCCCAGTTCTATTAGGCATTATAAATGCCCAAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTACAGAAAGATCATTGTaGTACTCCGACTTAATGTGT +
Preference number: 2 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSTERSL*YSDLMC
Trigger: ACACATTAAGTCGGAGTACCACAATGATCTTTCTGT...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
3UTR CAA 90 bp TACTTGGGTCCTATGGAACTACAGATTTTTGTTTGTTACCTTTGTTaGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: YLGPMELQIFVCYLC*WLLSTLYPVEYLLK
Trigger: TTTGAGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR TCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LKACLALIKAQLLGDLNRTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SPNSLTLANIVRISASLQTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp CTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAGGAATTCAAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: LLMCILTLCTKEERLRNSSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...TGAATTCCTTAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTAATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR TCA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCAGCCATAAAAAGGAATaGAATAATGGCATTTGCAGC +
Preference number: 2 (lower is better)
Translates to: YSSTICNCKNMEPAQMPISHKKE*NNGICS
Trigger: GCTGCAAATGCCATTATTTCATTCCTTTTTATGGCT...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR TCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAAAGTCTTCTCTTCCTGTaGGCAGTCCAGGTGATTTTA +
Preference number: 2 (lower is better)
Translates to: GGNITKLNILTQVVVSVESLLFL*AVQVIL
Trigger: TAAAATCACCTGGACTGCTCACAGGAAGAGAAGACT...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636525.2
3UTR-3UTR GCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 2 (lower is better)
Translates to: MLVCLKNTSQLLASSKISEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCCTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 2 (lower is better)
Translates to: VRISASLQEKSPEMLICSLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 2 (lower is better)
Translates to: QESCFLLAQKQMFHFPDKYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...CTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp CAAGTAAGTCATGTTACCTGGCTGAGCCTCAATTCCTTATTTGCAGAGAATGAGATTACTAACCAACAATaGAGCACTTGCAACACAATT +
Preference number: 2 (lower is better)
Translates to: QVSHVTWLSLNSLFAENEITNQQ*STCNTI
Trigger: AATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAAT...CTCATTCTCTGCAAATAAGGAATTGAGGCTCAGCCAGGTAACATGACTTACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 2 (lower is better)
Translates to: KVFLKSGHTISICRTLGPSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATGTCTTCCCGAGCATTTaGAGATCAGAATTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDVFPSI*RSEFLK
Trigger: CTTTAAAAATTCTGATCTCCAAATGCTCGGGAAGAC...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATTGTTACCTTTGTTTGTaGTTGCTCAGTACACTTTAC +
Preference number: 2 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDCYLCL*LLSTLY
Trigger: GTAAAGTGTACTGAGCAACCACAAACAAAGGTAACA...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTACCCACTTTGCCATTTaGTTGAACATGTTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: SASLQEKSPEMLICSNSATHFAI*LNMFLS
Trigger: GCTTAGAAACATGTTCAACCAAATGGCAAAGTGGGT...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636780.2
3UTR CAA 90 bp ATCCTCATTTGTTTTCCCTGCATAACCAAGTTCTTTGATTTGCAGTaGACCAAAACTTGGTACAAGAATCTTTGTCTCTTCAAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: ILICFPCITKFFDLQ*TKTWYKNLCLFKAV
Trigger: AACTGCCTTGAAGAGACAAAGATTCTTGTACCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATGCAGGGAAAACAAATGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR TCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 2 (lower is better)
Translates to: EKSPEMLICSNSADVHFNDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR GCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTATTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 2 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR GCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTATTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: AAILLMCILTLCTKEERLFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 2 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATATCATGGCAGATTTCTGCGTaGCTATGTTTTGGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: CFTGFQLILVIWAVVTISWQISA*LCFGFS
Trigger: TGAGAAACCAAAACATAGCCACGCAGAAATCTGCCA...TGATATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR CAA 90 bp ACAGATATCCTCATTTGTTTTCCCTGCATAACCAAGTTCTTTGATTaGCAGTTGACCAAAACTTGGTACAAGAATCTTTGTCTCTTCAAG +
Preference number: 2 (lower is better)
Translates to: TDILICFPCITKFFD*QLTKTWYKNLCLFK
Trigger: CTTGAAGAGACAAAGATTCTTGTACCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATGCAGGGAAAACAAATGAGGATATCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR TCA 90 bp GAACTGTTTGTGCACAATCACTGCATCAAAAATTTGCAAGAGACTCAACAGAAAGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 2 (lower is better)
Translates to: ELFVHNHCIKNLQETQQKDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...TTTCTGTTGAGTCTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAACAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATCAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 2 (lower is better)
Translates to: RISASLQEKSPEMLICSNQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 2 (lower is better)
Translates to: MLVCLKNTSQLLASSKISVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp TTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 2 (lower is better)
Translates to: LICSNSADVHFNFMHQGRSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...TCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR CAA 90 bp TGTGTTATTTGGGAAACCTGTTCTTTAAGGTATAGTGACAAATCTTaGATCTTTACAAAAACACTTCCAACCTTCTTGCCATTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: CVIWETCSLRYSDKS*IFTKTLPTFLPLPK
Trigger: CTTTGGCAATGGCAAGAAGGTTGGAAGTGTTTTTGTAAAGATCAAAGATTTGTCACTATACCTTAAAGAACAGGTTTCCCAAATAACACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CCA 90 bp ACCACTGCCTGTTATAAAACAGAAGTTAAGAATAGGCTTTGGCAGTTAGTTCTTTTTCATAATGACTTTTaGACTAGTTCTTCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: TTACYKTEVKNRLWQLVLFHNDF*TSSSGR
Trigger: CCTTCCTGAAGAACTAGTCCAAAAGTCATTATGAAA...AAGAACTAACTGCCAAAGCCTATTCTTAACTTCTGTTTTATAACAGGCAGTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR GCA 90 bp TTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGATTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: LICSNSADVHFNFMHQGRFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...TCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR CCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 2 (lower is better)
Translates to: MLVCLKNTSQLLASSKISSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGACCAGTAACATCTGGTaGGCAGGCACTGGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: PVLSRRSATSSTALTALWTSNIW*AGTGLR
Trigger: CCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGT...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR GCA 72 bp ACCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGAAGAGGGAGAACTACA +
Preference number: 3 (lower is better)
Translates to: TCPLSEKCNLFH*ADSFVGRGRTT
Trigger: TGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR TCA 72 bp TCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGGGAGAACTACAGGAAA +
Preference number: 3 (lower is better)
Translates to: SSLGEVQPLPLR*QLCGKRENYRK
Trigger: TTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTCACCCACTTTGCCATTaGGTTGAACATGTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAHPLCH*VEHVSC
Trigger: GCAGGAAACATGTTCAACCAAATGGCAAAGTGGGTG...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616833.6
3UTR TCA 72 bp CACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCTAAAAGCCTGTACTAT +
Preference number: 3 (lower is better)
Translates to: HRPVTSGWQALV*GPHFGAKSLYY
Trigger: ATAGTACAGGCTTTTAGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR GCA 72 bp TGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAACCGCTGAAGCACTAT +
Preference number: 3 (lower is better)
Translates to: CLFTQTCLQPCS*IPRLEEPLKHY
Trigger: ATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR CCA 72 bp TTGGTACGTTTCTTTCTTCCCTGTACTTGGAGTTGCTaGGATGCTGCTGATGACCTCTCCACCTGCCACGTT +
Preference number: 3 (lower is better)
Translates to: LVRFFLPCTWSC*DAADDLSTCHV
Trigger: AACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTACAGGGAAGAAAGAAACGTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR TCA 72 bp GGAGCCACTGCTCTAGAAGGCTGGCTATTACTGTTATaGGAACAAGCACCATACCCCATCCACCTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GATALEGWLLLL*EQAPYPIHLVC
Trigger: ACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATAGCCAGCCTTCTAGAGCAGTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR GCA 72 bp ATTGTGGGATCCGCCCAATGGGTTCACCTTGTCCGTTaGCCAGACAGAACCGATTTATCAAGATGGGAATTG +
Preference number: 3 (lower is better)
Translates to: IVGSAQWVHLVR*PDRTDLSRWEL
Trigger: CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGGATCCCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 72 bp GTATCTGTACTTATTTCCTCACAGACCAGTAACATCTaGTTGGCAGGCACTGGTCTGAGGACCACACTTCGG +
Preference number: 3 (lower is better)
Translates to: VSVLISSQTSNI*LAGTGLRTTLR
Trigger: CCGAAGTGTGGTCCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 3 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEATKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp AGGCAGCGCCTTGATTACACCAGAAAGGGGCATCCATTTCAGGTCGGAGATGGGTGTACAGTTGCCAAGTaGGAAAAGTTCATACCATTC +
Preference number: 3 (lower is better)
Translates to: RQRLDYTRKGHPFQVGDGCTVAK*EKFIPF
Trigger: GAATGGTATGAACTTTTCCAACTTGGCAACTGTACA...CCCATCTCCGACCTGAAATGGATGCCCCTTTCTGGTGTAATCAAGGCGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CAA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTTGGGGAAATGTACAGTaGCCAAGTTGGAAAAGTTCA +
Preference number: 3 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAWGNVQ*PSWKSS
Trigger: TGAACTTTTCCAACTTGGCAACTGTACATTTCCCCA...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635915.1
3UTR-3UTR CAA 90 bp TGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCGGCGGTTACCAGTTTaGTTTCAGAGTCAAACCGTG +
Preference number: 3 (lower is better)
Translates to: WVHLVRCPDRTDLSRWELRRLPV*FQSQTV
Trigger: CACGGTTTGACTCTGAAACAAAACTGGTAACCGCCG...CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp CCGCCCAATGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATAATCTTGTAGCTAGTTaGGAAGTCCTGCAAAGGCAG +
Preference number: 3 (lower is better)
Translates to: PPNGFTLSVAQTEPIYQDNLVAS*EVLQRQ
Trigger: CTGCCTTTGCAGGACTTCCAAACTAGCTACAAGATT...ATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACATTGCCAGGAGCAATTaGGGGAGGTTCAGACTCTTG +
Preference number: 3 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHIARSN*GRFRLL
Trigger: CAAGAGTCTGAACCTCCCCAAATTGCTCCTGGCAAT...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 72 bp CCAGGCTTCAGAATTCAGCTCAGATGTGATCTTTGTTaGCCTGCCTGTCAACGTAGGAGAAGGGAACTTCTC +
Preference number: 3 (lower is better)
Translates to: PGFRIQLRCDLC*PACQRRRRELL
Trigger: GAGAAGTTCCCTTCTCCTACGTTGACAGGCAGGTCAACAAAGATCACATCTGAGCTGAATTCTGAAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 72 bp GGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGTCTGCAGCCATGTTCC +
Preference number: 3 (lower is better)
Translates to: GRTTGNNEEVRR*LFTQTCLQPCS
Trigger: GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR GCA 72 bp AGAACTGGGCCCCAAACACTGCATCCTGTCACTGTGTaGAAACCTCTTTGGTTACTCCAACTTGAGTCCATA +
Preference number: 3 (lower is better)
Translates to: RTGPQTLHPVTV*KPLWLLQLESI
Trigger: TATGGACTCAAGTTGGAGTAACCAAAGAGGTTTGCACACAGTGACAGGATGCAGTGTTTGGGGCCCAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR GCA 72 bp AGATGGAGATTGCTTGCTCATTCTCCCAAGTCTCCTTaGTCATTCTCTTTTCTCCCACAGGAGACTCCTGGT +
Preference number: 3 (lower is better)
Translates to: RWRLLAHSPKSP*SFSFLPQETPG
Trigger: ACCAGGAGTCTCCTGTGGGAGAAAAGAGAATGAGCAAGGAGACTTGGGAGAATGAGCAAGCAATCTCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGAATGGTGTTTTCTCCTaGAATAGAAACGTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRNGVFS*NRNVFS
Trigger: ACTGAACACGTTTCTATTCAAGGAGAAAACACCATT...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGACCAGTAACATCTGGTaGGCAGGCACTGGTCTGAGG +
Preference number: 3 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLTSNIW*AGTGLR
Trigger: CCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGT...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 3 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635915.1
3UTR-3UTR CAA 90 bp CCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 3 (lower is better)
Translates to: PRSPNSLTLANIVRISASKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...AGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CAA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 3 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTA +
Preference number: 3 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLTALTA*WEEGEL
Trigger: TAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGT...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAAATGGTGTTTTCTCCTaGAATAGAAACGTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEANGVFS*NRNVFS
Trigger: ACTGAACACGTTTCTATTCAAGGAGAAAACACCATT...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCAATGGTGTTTTCTCCTaGAATAGAAACGTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: SAAMFLHTPVRRTAEALCNGVFS*NRNVFS
Trigger: ACTGAACACGTTTCTATTCAAGGAGAAAACACCATT...GCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR CCA 72 bp GAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTaGTACGTTTCTTTCTTCCCTGTACTTGGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: ENKHHTPSTLCV*YVSFFPVLGVA
Trigger: AGCAACTCCAAGTACAGGGAAGAAAGAAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 72 bp GCAGGTAGGGGCTTGGGAAGTGCTGATTGGTCAGTTTaGAGATGGAATTATAAGGGGTCAGAGTTAGGTTTT +
Preference number: 3 (lower is better)
Translates to: AGRGLGSADWSV*RWNYKGSELGF
Trigger: AAAACCTAACTCTGACCCCTTATAATTCCATCTCCAAACTGACCAATCAGCACTTCCCAAGCCCCTACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 72 bp GATAATTTGGCAGGTAGGGGCTTGGGAAGTGCTGATTaGTCAGTTTGGAGATGGAATTATAAGGGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: DNLAGRGLGSAD*SVWRWNYKGSE
Trigger: CTCTGACCCCTTATAATTCCATCTCCAAACTGACCAATCAGCACTTCCCAAGCCCCTACCTGCCAAATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp GATCCTTCCACCACCTCAGTTTCGCAAAGTGATAGGATTACAGGCGTAAGCCACGCAGTTGACCAAAACTaGGTACAAGAATCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: DPSTTSVSQSDRITGVSHAVDQN*VQESLS
Trigger: AGACAAAGATTCTTGTACCAAGTTTTGGTCAACTGC...GTGGCTTACGCCTGTAATCCTATCACTTTGCGAAACTGAGGTGGTGGAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGTTGGCAGGTAGGGGCTaGGGAAGTGCTGATTGGTCA +
Preference number: 3 (lower is better)
Translates to: FLFLLTSGFSDLETLILRLAGRG*GSADWS
Trigger: TGACCAATCAGCACTTCCCAAGCCCCTACCTGCCAA...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGTTCTCCCAAGTCTCCTaGCTCATTCTCTTTTCTCCC +
Preference number: 3 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKFSQVS*LILFSP
Trigger: GGGAGAAAAGAGAATGAGCAAGGAGACTTGGGAGAA...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 72 bp CCAGACAGAACCGATTTATCAAGATGGGAATTGCAATaGAGAAAGAGTAATTCACGCAGAGCCGGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: PDRTDLSRWELQ*RKSNSRRAGCV
Trigger: CACACAGCCGGCTCTGCGTGAATTACTCTTTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 72 bp GTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTaGAATGAAGAAAGAGTAATTCACGCAGAGCCGGCT +
Preference number: 3 (lower is better)
Translates to: VAQTEPIYQDGN*NEERVIHAEPA
Trigger: AGCCGGCTCTGCGTGAATTACTCTTTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCACCAAATTCAGCCAACTaGTTAAAGGTCCTTAACACA +
Preference number: 3 (lower is better)
Translates to: ALTALWEEGELQETMKKSPNSAN*LKVLNT
Trigger: TGTGTTAAGGACCTTTAACAAGTTGGCTGAATTTGG...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCAAACCAGAGAGTGTTTaGTTTCTGATAGGTAAAGGG +
Preference number: 3 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSKPESV*FLIGKG
Trigger: CCCTTTACCTATCAGAAACAAAACACTCTCTGGTTT...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TGGAAATGTTTTAGGCCGAGTTCATACTCCAGGATGGCTAACCCTCTCTTCTACCCAACAATGCAGCACTaGCAACACAATTCCAACTTT +
Preference number: 3 (lower is better)
Translates to: WKCFRPSSYSRMANPLFYPTMQH*QHNSNF
Trigger: AAAGTTGGAATTGTGTTGCAAGTGCTGCATTGTTGG...GTAGAAGAGAGGGTTAGCCATCCTGGAGTATGAACTCGGCCTAAAACATTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR GCA 72 bp TACATTGGGTACAGTGTACACTGCTCGGGTGATGGGTaGGCAAAAATCTCAGAAATCACCACTAAAGAACTT +
Preference number: 3 (lower is better)
Translates to: YIGYSVHCSGDG*AKISEITTKEL
Trigger: AAGTTCTTTAGTGGTGATTTCTGAGATTTTTGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR GCA 72 bp AGGGATAAAAGACTATACATTGGGTACAGTGTACACTaGTCGGGTGATGGGTGCGCAAAAATCTCAGAAATC +
Preference number: 3 (lower is better)
Translates to: RDKRLYIGYSVH*SGDGCAKISEI
Trigger: GATTTCTGAGATTTTTGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGTATAGTCTTTTATCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR CCA 72 bp AACCGGGGTTCAAGACCTGACTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCACTTAGCCTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: NRGSRPDFITTS*IARERSLSLSK
Trigger: CTTAGAAAGGCTAAGTGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAAGTCAGGTCTTGAACCCCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR CCA 72 bp CTCTTTGACCTTGAGAGGCAAGTAAGTCATGTTACCTaGCTGAGCCTCAATTCCTTATTTGCAGAGAATGAG +
Preference number: 3 (lower is better)
Translates to: LFDLERQVSHVT*LSLNSLFAENE
Trigger: CTCATTCTCTGCAAATAAGGAATTGAGGCTCAGCCAGGTAACATGACTTACTTGCCTCTCAAGGTCAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 72 bp CTGTCTCTTGCTGGTCACTCACGTGGAGCTTTTACTTaGGTCCTATGGAACTACAGATTTTTGTTTGTTACC +
Preference number: 3 (lower is better)
Translates to: LSLAGHSRGAFT*VLWNYRFLFVT
Trigger: GGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACGTGAGTGACCAGCAAGAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTCCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 3 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCCCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 3 (lower is better)
Translates to: FLKSGHTISICRTLGPKVPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 3 (lower is better)
Translates to: FLKSGHTISICRTLGPKVTKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTA +
Preference number: 3 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLTALTA*WEEGEL
Trigger: TAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGT...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGAGTCTTGTTTCCTGTaGGCCCAAAAACAGATGTTT +
Preference number: 3 (lower is better)
Translates to: LTALWEEGELQETMKKSEESCFL*AQKQMF
Trigger: AAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATGTGTACAAGGTCCTTTaGTATCTTGACCTCCACCTG +
Preference number: 3 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDVYKVL*YLDLHL
Trigger: CAGGTGGAGGTCAAGATACAAAAGGACCTTGTACAC...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGACACTTCCAACCTTCTaGCCATTGCCAAAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: FLFLLTSGFSDLETLILRTLPTF*PLPKVS
Trigger: GCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 72 bp CATCCATTTCAGGTCGGAGATGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCATACCATTCCATTGTGT +
Preference number: 3 (lower is better)
Translates to: HPFQVGDGEMYS*QVGKVHTIPLC
Trigger: ACACAATGGAATGGTATGAACTTTTCCAACTTGGCAACTGTACATTTCCCCATCTCCGACCTGAAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CAA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 3 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSTKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp GACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGAATGGTGTTTTCTCCTaGAATAGAAACGTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: DSFVGRGRTTGNNEEVRRNGVFS*NRNVFS
Trigger: ACTGAACACGTTTCTATTCAAGGAGAAAACACCATT...CCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAACCAAATTCAGCCAACTaGTTAAAGGTCCTTAACACA +
Preference number: 3 (lower is better)
Translates to: LTALWEEGELQETMKKSEPNSAN*LKVLNT
Trigger: TGTGTTAAGGACCTTTAACAAGTTGGCTGAATTTGG...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp GTTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTGAGTCTTGTTTCCTGTaGGCCCAAAAACAGATGTTT +
Preference number: 3 (lower is better)
Translates to: VNTGFATSRSTITPVMVSESCFL*AQKQMF
Trigger: AAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC...AGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCGAGTCTTGTTTCCTGTaGGCCCAAAAACAGATGTTT +
Preference number: 3 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSESCFL*AQKQMF
Trigger: AAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAGAACATCTAGTGCAGGGTTaGCAAAATATCTCAAGCACT +
Preference number: 3 (lower is better)
Translates to: LSVAQTEPIYQDGNCNEEHLVQG*QNISST
Trigger: AGTGCTTGAGATATTTTGCAAACCCTGCACTAGATG...TTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATACGTGGAGCTTTTACTaGGGTCCTATGGAACTACAG +
Preference number: 3 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNTWSFY*GPMELQ
Trigger: CTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACGT...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 72 bp GCTGGTCACTCACGTGGAGCTTTTACTTGGGTCCTATaGAACTACAGATTTTTGTTTGTTACCTTTGTTTGT +
Preference number: 3 (lower is better)
Translates to: AGHSRGAFTWVL*NYRFLFVTFVC
Trigger: ACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACGTGAGTGACCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCCCTCTCAGGAAGTACTaGAAAGTTGAAACTGAATCA +
Preference number: 3 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSPLRKY*KVETES
Trigger: TGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAGG...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGTTGGTACAAGAATCTTaGTCTCTTCAAGGCAGTTCT +
Preference number: 3 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLLVQES*SLQGSS
Trigger: AGAACTGCCTTGAAGAGACAAAGATTCTTGTACCAA...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATCCAAATTCAGCCAACTaGTTAAAGGTCCTTAACACA +
Preference number: 3 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNPNSAN*LKVLNT
Trigger: TGTGTTAAGGACCTTTAACAAGTTGGCTGAATTTGG...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp CTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCTGGGGAAATGTACAGTaGCCAAGTTGGAAAAGTTCA +
Preference number: 3 (lower is better)
Translates to: LVSCWPKNRCFISQISRFWGNVQ*PSWKSS
Trigger: TGAACTTTTCCAACTTGGCAACTGTACATTTCCCCA...GAACCTACTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CAA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCCACTTTGCCATTTGGTaGAACATGTTTCCTGATATA +
Preference number: 3 (lower is better)
Translates to: FLKSGHTISICRTLGPKVHFAIW*NMFPDI
Trigger: TATATCAGGAAACATGTTCAACCAAATGGCAAAGTG...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR-3UTR CAA 90 bp AAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGACTTTTGTCGGCTAACAGATCCTaGTTACATTTAAAAGACCTC +
Preference number: 3 (lower is better)
Translates to: KGVNWPGMKERTANDGLLSANRS*LHLKDL
Trigger: GAGGTCTTTTAAATGTAACAAGGATCTGTTAGCCGA...CAAAAGTCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CAA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATAGTCTTCCCGAGCATTaGGAGATCAGAATTTTTAAA +
Preference number: 3 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDSLPEH*EIRIFK
Trigger: TTTAAAAATTCTGATCTCCAAATGCTCGGGAAGACT...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATTTAGATGGAGATTGCTaGCTCATTCTCCCAAGTCTC +
Preference number: 3 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNLDGDC*LILPSL
Trigger: GAGACTTGGGAGAATGAGCAAGCAATCTCCATCTAA...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTAGTACAGAAAGATCATaGTGGTACTCCGACTTAATG +
Preference number: 3 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSSTERS*WYSDLM
Trigger: CATTAAGTCGGAGTACCACAATGATCTTTCTGTACT...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
3UTR-3UTR CAA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 3 (lower is better)
Translates to: CLKNTSQLLASSKISARNTKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp AGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCACTTTGCCATTTGGTaGAACATGTTTCCTGATATA +
Preference number: 3 (lower is better)
Translates to: RTTGNNEEVRRCLFTQTCHFAIW*NMFPDI
Trigger: TATATCAGGAAACATGTTCAACCAAATGGCAAAGTG...ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635915.1
3UTR-3UTR CAA 90 bp TATTACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGCCTCAATTCCTTATTaGCAGAGAATGAGTATCTTA +
Preference number: 3 (lower is better)
Translates to: YYCYENKHHTPSTLCVWYASIPY*QRMSIL
Trigger: TAAGATACTCATTCTCTGCAAATAAGGAATTGAGGC...GTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR-3UTR CAA 90 bp TTGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTATTTTTAAAGATAATTaGGCAGGTAGGGGCTTGGGA +
Preference number: 3 (lower is better)
Translates to: LLPLFVVAQYTLPCGILAIFKDN*AGRGLG
Trigger: TCCCAAGCCCCTACCTGCCAAATTATCTTTAAAAAT...AGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 72 bp GGAAGCATGATTACTTCCTCAAGTCCTGGGGTTCACTaGATAATTATTGTCACAACAGTGCTTTCATTTCAG +
Preference number: 3 (lower is better)
Translates to: GSMITSSSPGVH*IIIVTTVLSFQ
Trigger: CTGAAATGAAAGCACTGTTGTGACAATAATTATTCAGTGAACCCCAGGACTTGAGGAAGTAATCATGCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 72 bp GATTTGCCACATCTAGAAGCACAATCACTCCAGTTATaGTGTCTAAACGAATGTCTAAAGTTAGGTGAATGG +
Preference number: 3 (lower is better)
Translates to: DLPHLEAQSLQL*CLNECLKLGEW
Trigger: CCATTCACCTAACTTTAGACATTCGTTTAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR CCA 72 bp AATCATATGGACAAGCTCCTTACTTCTCAAATGCTATaGTATATTGTCTCCATTTTGCACATGAGGCAACGG +
Preference number: 3 (lower is better)
Translates to: NHMDKLLTSQML*YIVSILHMRQR
Trigger: CCGTTGCCTCATGTGCAAAATGGAGACAATATACCATAGCATTTGAGAAGTAAGGAGCTTGTCCATATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CCA 72 bp TCAGAATTTTTAAAGATAATTTGGCAGGTAGGGGCTTaGGAAGTGCTGATTGGTCAGTTTGGAGATGGAATT +
Preference number: 3 (lower is better)
Translates to: SEFLKIIWQVGA*EVLIGQFGDGI
Trigger: AATTCCATCTCCAAACTGACCAATCAGCACTTCCCAAGCCCCTACCTGCCAAATTATCTTTAAAAATTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR-3UTR CAA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATCCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 3 (lower is better)
Translates to: RISASLQEKSPEMLICSNPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 3 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLTKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATATCAAGCAATTTCCTGAGTTaGGTAGAAGTTCGTGTTGCC +
Preference number: 3 (lower is better)
Translates to: CFTGFQLILVIWAVVTISSNFLS*VEVRVA
Trigger: GGCAACACGAACTTCTACCAAACTCAGGAAATTGCT...TGATATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp CACACTATAATTTCTACCCCACACATAGATAGTAATGAGCTTTGCACAGACTCCTACAGATATCCTCATTaGTTTTCCCTGCATAACCAA +
Preference number: 3 (lower is better)
Translates to: HTIISTPHIDSNELCTDSYRYPH*FSLHNQ
Trigger: TTGGTTATGCAGGGAAAACAAATGAGGATATCTGTA...GGAGTCTGTGCAAAGCTCATTACTATCTATGTGTGGGGTAGAAATTATAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp CACACTATAATTTCTACCCCACACATAGATAGTAATGAGCTTTGCACAGACTCCAGCATGTGTGTAGTTTaGGAACATCACTCTTTGTAT +
Preference number: 3 (lower is better)
Translates to: HTIISTPHIDSNELCTDSSMCVV*EHHSLY
Trigger: ATACAAAGAGTGATGTTCCAAAACTACACACATGCT...GGAGTCTGTGCAAAGCTCATTACTATCTATGTGTGGGGTAGAAATTATAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp CTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAGGAATTCAAAACCAGAGAGTGTTTaGTTTCTGATAGGTAAAGGG +
Preference number: 3 (lower is better)
Translates to: LLMCILTLCTKEERLRNSKPESV*FLIGKG
Trigger: CCCTTTACCTATCAGAAACAAAACACTCTCTGGTTT...TGAATTCCTTAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGTTCATACCATTCCATaGTGTAGTTCTTGCCAGTTA +
Preference number: 3 (lower is better)
Translates to: SPNSLTLANIVRISASLQVHTIP*CSSCQL
Trigger: TAACTGGCAAGAACTACACAATGGAATGGTATGAAC...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636681.1
3UTR GCA 72 bp AATAGGGTAGATTTTGAGTCAGAGCAGTCACATAATTaGTTTTCTTCTCACTATGTAGAGGGAGAAGAGTTG +
Preference number: 3 (lower is better)
Translates to: NRVDFESEQSHN*FSSHYVEGEEL
Trigger: CAACTCTTCTCCCTCTACATAGTGAGAAGAAAAGCAATTATGTGACTGCTCTGACTCAAAATCTACCCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CCA 72 bp TTAAGTCATATTGCTCAAAGGGCAGCAAAACTTAATTaGCAGATTTCTGCGTGGCTATGTTTTGGTTTCTCA +
Preference number: 3 (lower is better)
Translates to: LSHIAQRAAKLN*QISAWLCFGFS
Trigger: TGAGAAACCAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAATATGACTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR CCA 72 bp ATGTTTATAGCAGCACAATTTGCAACTGCAAAAATATaGAACCAGCTCAAATGCCCATCAATCAATGAGTGG +
Preference number: 3 (lower is better)
Translates to: MFIAAQFATAKI*NQLKCPSINEW
Trigger: CCACTCATTGATTGATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR CAA 90 bp TTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGACCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 3 (lower is better)
Translates to: LICSNSADVHFNFMHQGRPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...TCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 3 (lower is better)
Translates to: KSPEMLICSNSADVHFNFTKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR-3UTR CAA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGTGGGAGACTAGAGTTTaGTTATTACTCAAATCAGTC +
Preference number: 3 (lower is better)
Translates to: FLFLLTSGFSDLETLILRWETRV*LLLKSV
Trigger: GACTGATTTGAGTAATAACAAAACTCTAGTCTCCCA...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR TCA 72 bp ACTACTGTATTATACTACTGTCTGCTGTTTAATTTCTaGCTCCTCCCACTATTGACATGTTTGCTGATCCTT +
Preference number: 3 (lower is better)
Translates to: TTVLYYCLLFNF*LLPLLTCLLIL
Trigger: AAGGATCAGCAAACATGTCAATAGTGGGAGGAGTCAGAAATTAAACAGCAGACAGTAGTATAATACAGTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR GCA 72 bp CAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATaGCCATCAATCAATGAGTGGATAAAGAAAATGTGG +
Preference number: 3 (lower is better)
Translates to: QFATAKIWNQLK*PSINEWIKKMW
Trigger: CCACATTTTCTTTATCCACTCATTGATTGATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
3UTR-3UTR CAA 90 bp TGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATATCATTGGTACAAGAATCTTaGTCTCTTCAAGGCAGTTCT +
Preference number: 3 (lower is better)
Translates to: CFTGFQLILVIWAVVTISLVQES*SLQGSS
Trigger: AGAACTGCCTTGAAGAGACAAAGATTCTTGTACCAA...TGATATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp CATTGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATAACCAAGTTCTTTGATTaGCAGTTGACCAAAACTTGG +
Preference number: 3 (lower is better)
Translates to: HCFTGFQLILVIWAVVTITKFFD*QLTKTW
Trigger: CCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGT...TATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR-3UTR CAA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGATGTACAGTTGCCAAGTaGGAAAAGTTCATACCATTC +
Preference number: 3 (lower is better)
Translates to: MLICSNSADVHFNFMHQGCTVAK*EKFIPF
Trigger: GAATGGTATGAACTTTTCCAACTTGGCAACTGTACA...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
3UTR TCA 72 bp TATCCTCATTTGTTTTCCCTGCATAACCAAGTTCTTTaGTTTGCAGTTGACCAAAACTTGGTACAAGAATCT +
Preference number: 3 (lower is better)
Translates to: YPHLFSLHNQVL*FAVDQNLVQES
Trigger: AGATTCTTGTACCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATGCAGGGAAAACAAATGAGGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
3UTR GCA 72 bp GCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATaGAGCAATTCTGCTGATGTGCATTTTAACTTTATG +
Preference number: 3 (lower is better)
Translates to: ASLQEKSPEMLI*SNSADVHFNFM
Trigger: CATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
3UTR GCA 72 bp AAGTTAGTAGGTTTCTTCACTGTGTTTTCCTCTACATaGAACAATATATTAGATGACACTTTGTGGGTATAC +
Preference number: 3 (lower is better)
Translates to: KLVGFFTVFSST*NNILDDTLWVY
Trigger: GTATACCCACAAAGTGTCATCTAATATATTGTTGCATGTAGAGGAAAACACAGTGAAGAAACCTACTAACTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAGCAGGTTCCGGCGCATaGCACCTCCCCGCGCCCGGC +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIAGSGA*HLPAPG
Trigger: GCCGGGCGCGGGGAGGTGTCATGCGCCGGAACCTGC...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGCCTGCGCCATCAGGCTaGACCCAGTACTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGPAPSG*TQYFRS
Trigger: GCTCCGGAAGTACTGGGTGCAGCCTGATGGCGCAGG...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636183.2
ENST00000636780.2
CDS-3UTR CCA 90 bp GCAGTGGTGCGATCTTGGCTCGTGGGAACCTCCACCTCCTGGATTCAAGTGATTGTCAGCTCCAGAGCTTaGCCCCAAGCGCAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: AVVRSWLVGTSTSWIQVIVSSRA*PQAQVP
Trigger: CGGAACCTGCGCTTGGGGCCAAGCTCTGGAGCTGAC...AATCACTTGAATCCAGGAGGTGGAGGTTCCCACGAGCCAAGATCGCACCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCGCCGTGTCTACCTCCTaGGCCATCAGGCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISAVSTS*AIRLHP
Trigger: TGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGC...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCCCACTACCCGAGTGCTaGCGAATCTACCCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISPLPEC*RIYPLP
Trigger: GGGGAGGGGGTAGATTCGGCAGCACTCGGGTAGTGG...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGCCTGCGACGCCGGTaGGAGGAGCATGCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: LTALWEEGELQETMKKSEGLRRR*EEHARS
Trigger: GCTCCGCGCATGCTCCTCCCACCGGCGTCGCAGGCC...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTGTGGGGGTGTCACTaGCTTCCTTGGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISLWGCH*LPWALQ
Trigger: CTGGAGGGCCCAAGGAAGTCAGTGACACCCCCACAA...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGTGCTTAGTGGGGAAATaGCTCGTCCTCACTCGACCT +
Preference number: 4 (lower is better)
Translates to: PVLSRRSATSSTALTALWCLVGK*LVLTRP
Trigger: AGGTCGAGTGAGGACGAGTCATTTCCCCACTAAGCA...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACCATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GCAGTGGTGCGATCTTGGCTCGTGGGAACCTCCACCTCCTGGATTCAAGTGATTACTCCTTTGCCCACTTaGTGCTCCAGGTTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: AVVRSWLVGTSTSWIQVITPLPT*CSRFGG
Trigger: ACCCCCAAACCTGGAGCAGCAAGTGGGCAAAGGAGT...AATCACTTGAATCCAGGAGGTGGAGGTTCCCACGAGCCAAGATCGCACCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGTGGGACTCAGTACCCTaGCCCAAACACACACTCCTT +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGWDSVP*PKHTLL
Trigger: AAGGAGTGTGTGTTTGGGGCAGGGTACTGAGTCCCA...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGCCGGTGGGAGGAGCATaGGCGGAGCCGCCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLPVGGA*AEPPVR
Trigger: CCGGACTGGCGGCTCCGCGCATGCTCCTCCCACCGG...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR GCA 90 bp TCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAACATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SCIPRLEEPLKHYAISLKHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...TTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCACCTGCGCCATCAGGCTaGACCCAGTACTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSPAPSG*TQYFRS
Trigger: GCTCCGGAAGTACTGGGTGCAGCCTGATGGCGCAGG...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGGGCGCCTTGCCCCTaGGCGTCAGCTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LTALWEEGELQETMKKSEGAPCP*ASAPEL
Trigger: AAGCTCTGGAGCTGACGCGCAGGGGCAAGGCGCCCC...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGCCTGTTTGCCTTTGTaGACAGGGAAAAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: PVLSRRSATSSTALTALWACLPL*TGKKHV
Trigger: CACATGCTTTTTCCCTGTTCACAAAGGCAAACAGGC...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGGCCGTGTCTACCTCCTaGGCCATCAGGCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: DSFVGRGRTTGNNEEVRRAVSTS*AIRLHP
Trigger: TGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGC...CCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGGCCGTGTCTACCTCCTaGGCCATCAGGCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWAVSTS*AIRLHP
Trigger: TGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGC...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEAIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGGAATGGGTACAGTGTACACTaGTCGGGTGATGGGTGCGCA +
Preference number: 4 (lower is better)
Translates to: RYWRDVGEREHFFSAARNGYSVH*SGDGCA
Trigger: TGCGCACCCATCACCCGAGCAGTGTACACTGTACCC...ATTCCTAGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTCCCTGTACTTGGAGTTaGTGGGATGCTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSPCTWS*WDAADD
Trigger: GTCATCAGCAGCATCCCAGCAACTCCAAGTACAGGG...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTTGCCTGAGGAGCCACTaGTCTAGAAGGCTGGCTATT +
Preference number: 4 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSCLRSH*SRRLAI
Trigger: AATAGCCAGCCTTCTAGAGCAGTGGCTCCTCAGGCA...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp TTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAGAACCGGGAGGCGGAGGTTaGAGTGAGCCGAGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: LSVAQTEPIYQDGNCNEEPGGGG*SEPRSH
Trigger: GTGCGACCTCGGCTCACTGCAACCTCCGCCTCCCGG...TTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTGCGGAGGTTCAGGCTaGGCTGCATTTTACCATACG +
Preference number: 4 (lower is better)
Translates to: SAAMFLHTPVRRTAEALCCGGSG*AAFYHT
Trigger: CGTATGGTAAAATGCAGCCCAGCCTGAACCTCCGCA...GCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CAGCCAGCCCAGGCTTCAGAATTCAGCTCAGATGTGATCTTTGTTGACCTGCCTGGGCTTGGGAAGTGCTaGTTGGTCAGTTTGGAGATG +
Preference number: 4 (lower is better)
Translates to: QPAQASEFSSDVIFVDLPGLGKC*LVSLEM
Trigger: CATCTCCAAACTGACCAATCAGCACTTCCCAAGCCC...AGGCAGGTCAACAAAGATCACATCTGAGCTGAATTCTGAAGCCTGGGCTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TCATCTTGGGCATTTATAATGCCTAATAGAACTGGGCCCCAAACACTGCATCCTGCCGTGTCTACCTCCTaGGCCATCAGGCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: SSWAFIMPNRTGPQTLHPAVSTS*AIRLHP
Trigger: TGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGC...AGGATGCAGTGTTTGGGGCCCAGTTCTATTAGGCATTATAAATGCCCAAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTCATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR GCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEALQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: PVLSRRSATSSTALTALWEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGCAGGAAAATTCCAGCTaGTTGCTGACACCCAACTTT +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGQENSS*LLTPNF
Trigger: AAAGTTGGGTGTCAGCAAGCAGCTGGAATTTTCCTG...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp GCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATAGCCTCACGTGTAGCTaGGATTACAGGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: AAMFLHTPVRRTAEALCYSLTCS*DYRHGP
Trigger: TGGTCCATGCCTGTAATCCCAGCTACACGTGAGGCT...ATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCACAATAGTGCGGAAATaGCTCGTCGTCACCCGACCT +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISTIVRK*LVVTRP
Trigger: AGGTCGGGTGACGACGAGCCATTTCCGCACTATTGT...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTAGGAAGACGTTCATGTaGAGAAGGTTCAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTARKTFM*RRFKPP
Trigger: TGGAGGCTTGAACCTTCTTCACATGAACGTCTTCCT...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATGCAGTCCAGGAAGGTaGTTTGGTCTGGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SCIPRLEEPLKHYAISLKCSPGR*FGLAPR
Trigger: CCTGGGAGCCAGACCAAAGCACCTTCCTGGACTGCA...TTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATGAGCCTCTCGAGGCCTaGGACGCCGGTGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNEPLEA*DAGGRS
Trigger: GCTCCTCCCACCGGCGTCGCAGGCCTCGAGAGGCTC...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTTTTCTTCCCTGTACTTaGAGTTGCTGGGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSFLPCT*SCWDAA
Trigger: AGCAGCATCCCAGCAACTCCAAGTACAGGGAAGAAA...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
3UTR CAA 72 bp CGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTACAGGAAACAATGAAG +
Preference number: 4 (lower is better)
Translates to: RRSATSSTALTA*WEEGELQETMK
Trigger: CTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
3UTR CAA 72 bp TCTGTACTTATTTCCTCACAGACCAGTAACATCTGGTaGGCAGGCACTGGTCTGAGGACCACACTTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SVLISSQTSNIW*AGTGLRTTLRC
Trigger: GCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CCTGACTTCATTACTACTAGCTGGATAGCCAGAGAAAGATCACTTAGCCTTTCTTGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PDFITTSWIARERSLSLSWQALV*GPHFGA
Trigger: AGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCA...AGAAAGGCTAAGTGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAAGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGGTCTTTAAGGGTCCTTaGACCCAACCAGTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRVFKGP*TQPVFL
Trigger: TAAAAAGACTGGTTGGGTTCAAGGACCCTTAAAGAC...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCACAATTACCCGGCTTTTaGGGAGCCTCTTGTGGCATG +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSQLPGF*GASCGM
Trigger: CATGCCACAAGAGGCTCCTCAAAAGCCGGGTAATTG...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp GTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTGCCATTTGATCCAGCAATCCATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: VWRFLKELKVELPFDPAIHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...GATTGCTGGATCAAATGGCAGTTCTACTTTTAGTTCTTTAAGGAATCTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATCATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp GCTGAACTCTTTTCATTACTAACCAACAATGCAGCACTTGCAACACAATTCCAACATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: AELFSLLTNNAALATQFQHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...TTGGAATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAATGAAAAGAGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCATGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGGCTAAGGAGTGCCAGTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKAKECQ*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCACTGGCACTCCTTAGC...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCCTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTTTTGGGAGGCCAAGGTaGGCAGATGACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAFGRPR*ADDLRS
Trigger: TGACCTCAGGTCATCTGCCCACCTTGGCCTCCCAAA...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp TCTGTACTTATTTCCTCACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTGTTGCTGCTCCAGGTTTaGGGGTTTTGCGGAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SVLISSQTSNIWLAGTGLLLLQV*GFCGGS
Trigger: TGAACCTCCGCAAAACCCCCAAACCTGGAGCAGCAA...CAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp ACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAACACTGTGCTCCAGCCTaGCAACAGAGCGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: TLSVAQTEPIYQDGNCNEHCAPA*QQSETQ
Trigger: CTGAGTCTCGCTCTGTTGCCAGGCTGGAGCACAGTG...TTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGGGAGGTTCAGACTCTTaGAGCCAGAGGCTTCATGAC +
Preference number: 4 (lower is better)
Translates to: WVHLVRCPDRTDLSRWELGGSDS*SQRLHD
Trigger: GTCATGAAGCCTCTGGCTCCAAGAGTCTGAACCTCC...CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp ACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTaGCTGGTCACTCACGTGGAGCTTTTACTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: TRSFCILTSTCL*LVTHVELLLGS
Trigger: GGACCCAAGTAAAAGCTCCACGTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LTALWEEGELQETMKKSEKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATACTCCTGACCTCAAGTaGTCCGTCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNTPDLK*SVHLGL
Trigger: GAGGCCAAGGTGGACGGATCACTTGAGGTCAGGAGT...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAGATGGGTGGATCACTTaGGGTCCGGAGTTCGATACT +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEDGWIT*GPEFDT
Trigger: AGTATCGAACTCCGGACCTCAAGTGATCCACCCATC...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTCACCCACAACTCGTGTaGAGCATCATAATGTTTGTA +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAHPQLV*SIIMFV
Trigger: TACAAACATTATGATGCTTCACACGAGTTGTGGGTG...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGGGCGTCATCTTTTATaGATTGACCTGTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSGRHLL*IDLSLP
Trigger: GGGCAAGGACAGGTCAATTCATAAAAGATGACGCCC...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp CCGCCCAATGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATAATTCAGCTCAGATGTaGTCTTTGTTGACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PPNGFTLSVAQTEPIYQDNSAQM*SLLTCL
Trigger: CAGGCAGGTCAACAAAGATCACATCTGAGCTGAATT...ATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCAGTATGAGGTCAGCCTaGGGTGCTCCATTAATTACA +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGSMRSA*GAPLIT
Trigger: TGTAATTAATGGAGCACCTCAGGCTGACCTCATACT...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATGCCGTGTCTACCTCCTaGGCCATCAGGCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNAVSTS*AIRLHP
Trigger: TGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGC...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTCATCTCGGCGCCCTGTaGCGTGTCTACCTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLHLGAL*RVYLLR
Trigger: GCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATG...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000636183.2
ENST00000636780.2
CDS-3UTR GCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTCTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAAATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SCIPRLEEPLKHYAISLKIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...TTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTGCCATTTGATCCAGCAATCCCTGCGCCATCAGGCTaGACCCAGTACTTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VWRFLKELKVELPFDPAIPAPSG*TQYFRS
Trigger: GCTCCGGAAGTACTGGGTGCAGCCTGATGGCGCAGG...GATTGCTGGATCAAATGGCAGTTCTACTTTTAGTTCTTTAAGGAATCTCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCCAGGTTTGGGGGTTTTaGGGAGGTTCAGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSQVWGF*GGSGWA
Trigger: AGCCCAGCCTGAACCTCCGCAAAACCCCCAAACCTG...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAGAGCCTCTTGTGGCATaGTTTGCTGTTAGGCACAAA +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIEPLVA*FAVRHK
Trigger: TTTGTGCCTAACAGCAAAGCATGCCACAAGAGGCTC...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACCAACCTTCTTGCCATTaGCAAAGGTCAGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHQPSCH*QRSAFS
Trigger: GGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTG...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AGGCAGCGCCTTGATTACACCAGAAAGGGGCATCCATTTCAGGTCGGAGATGGGAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: RQRLDYTRKGHPFQVGDGSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...CCCATCTCCGACCTGAAATGGATGCCCCTTTCTGGTGTAATCAAGGCGCTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636681.1
CDS-3UTR CCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCILSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 4 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: LWEEGELQETMKKSEGACALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGGAATCAGCAATCCCAGTACTaGGTATCTACCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RYWRDVGEREHFFSAARNQQSQY*VSTQRK
Trigger: CTTCCTTTGGGTAGATACCCAGTACTGGGATTGCTG...ATTCCTAGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACGATATTGGCGGGATGTaGGGGAAAGGGAACACTTCT +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHDIGGM*GKGNTS
Trigger: AGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATC...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGCTTGAACCCAAGAGGTaGAGGTTGCAGCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWLEPKR*RLQQAE
Trigger: CTCAGCTTGCTGCAACCTCCACCTCTTGGGTTCAAG...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACGTAATCCCAGCTACTTaGGACGCTAAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHVIPAT*DAKAGE
Trigger: TTCTCCAGCCTTAGCGTCCCAAGTAGCTGGGATTAC...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCAAGAAGGTAGTGTTTTaGTTGGGTGTGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGKKVVF*LGVVAH
Trigger: GTGAGCTACCACACCCAACCAAAACACTACCTTCTT...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636767.2
ENST00000637397.2
CDS-3UTR CCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCCATAGATACTCATTTTaGGGCTTCCAGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGHRYSF*GFQSRL
Trigger: CAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATG...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR CCA 90 bp GATCCTTCCACCACCTCAGTTTCGCAAAGTGATAGGATTACAGGCGTAAGCCACTCTCTTGATTACATATaGGACTCAGTACCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DPSTTSVSQSDRITGVSHSLDYI*DSVPCP
Trigger: GGGGCAGGGTACTGAGTCCCATATGTAATCAAGAGA...GTGGCTTACGCCTGTAATCCTATCACTTTGCGAAACTGAGGTGGTGGAAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCACCACCACAATCCATTaGAGGATATGTAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISTTTIH*RICSLW
Trigger: CCACAAGCTACATATCCTCCAATGGATTGTGGTGGT...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGTGGCAGGTAGGGGCTTaGGAAGTGCTGATTGGTCAG +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKWQVGA*EVLIGQ
Trigger: CTGACCAATCAGCACTTCCCAAGCCCCTACCTGCCA...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGGCAGAGCCGGCTGTGTaGGAGACTAGAGTTTTGTTA +
Preference number: 4 (lower is better)
Translates to: WVHLVRCPDRTDLSRWELAEPAV*ETRVLL
Trigger: TAACAAAACTCTAGTCTCCCACACAGCCGGCTCTGC...CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp GACCCCCACATTGTAATTTCTAATCTTGTAGCTAGTTaGGAAGTCCTGCAAAGGCAGACTGGACCCCGGCAA +
Preference number: 4 (lower is better)
Translates to: DPHIVISNLVAS*EVLQRQTGPRQ
Trigger: TTGCCGGGGTCCAGTCTGCCTTTGCAGGACTTCCAAACTAGCTACAAGATTAGAAATTACAATGTGGGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp AATTGTGGGATCCGCCCAATGGGTTCACCTTGTCCGTaGCCCAGACAGAACCGATTTATCAAGATGGGAATT +
Preference number: 4 (lower is better)
Translates to: NCGIRPMGSPCP*PRQNRFIKMGI
Trigger: AATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGGATCCCACAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp TCTGTGCTTCCTGGCTTCATAGTGTACAAGGTCCTTTaGTATCTTGACCTCCACCTGTCTCTTGCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SVLPGFIVYKVL*YLDLHLSLAGH
Trigger: GTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACACTATGAAGCCAGGAAGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCACATAACTGGGATAGGTaGGCCAGTTGGACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSHNWDR*ASWTES
Trigger: ACTTTCTGTCCAACTGGCTCACCTATCCCAGTTATG...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CCAGTTAATGTACTTCTGAATCCAATGGCATCATGCATAATTTTCTGCCTGCCCAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PVNVLLNPMASCIIFCLPKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...GGGCAGGCAGAAAATTATGCATGATGCCATTGGATTCAGAAGTACATTAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR TCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp TTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAGAAAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSVAQTEPIYQDGNCNEEKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...TTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TATTACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: YYCYENKHHTPSTLCVWYKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...GTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTACCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCTGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: VRISASLQEKSPEMLICSWQALV*GPHFGA
Trigger: AGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCA...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATTGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNWQALV*GPHFGA
Trigger: AGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCA...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCATGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LKPRSPNSLTLANIVRISWQALV*GPHFGA
Trigger: AGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCA...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTCCACCACTATCCTTATaGGACAAGAATGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSPPLSL*DKNASK
Trigger: TTTTGAAGCATTCTTGTCTCATAAGGATAGTGGTGG...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGGATGGGTGGATCACTTaGGGTCCGGAGTTCGATACT +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKDGWIT*GPEFDT
Trigger: AGTATCGAACTCCGGACCTCAAGTGATCCACCCATC...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp GCAGTGGTGCGATCTTGGCTCGTGGGAACCTCCACCTCCTGGATTCAAGTGATTGTTAGGCACAAATACTaGCTTAAGTCTATACGTAGT +
Preference number: 4 (lower is better)
Translates to: AVVRSWLVGTSTSWIQVIVRHKY*LKSIRS
Trigger: ACTACGTATAGACTTAAGTCAGTATTTGTGCCTAAC...AATCACTTGAATCCAGGAGGTGGAGGTTCCCACGAGCCAAGATCGCACCACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LWEEGELQETMKKSEGACLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GACTATACATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCAAAAATCTTGCTCGGGTGATGGGTaGGCAAAAATCTCAGAAATC +
Preference number: 4 (lower is better)
Translates to: DYTLGTVYTARVMGAQKSCSGDG*AKISEI
Trigger: GATTTCTGAGATTTTTGCGCACCCATCACCCGAGCA...AGATTTTTGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGTATAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACCACGTAACGAGCGGCTaGGACTCCCCAGTCCTCAAC +
Preference number: 4 (lower is better)
Translates to: EKSPEMLICSNSADVHFNHVTSG*DSPVLN
Trigger: GTTGAGGACTGGGGAGTCGCAGCCGCTCGTTACGTG...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR GCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTCTGGAAAGAAGTTTCTaGATCACCTTCTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTALERSF*ITFSSL
Trigger: CAAAGAAGAGAAGGTGATGCAGAAACTTCTTTCCAG...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp TCTGTACTTATTTCCTCACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTGGAATTGACCTGTCCTTaGCCAAAAGCCACCACCAAA +
Preference number: 4 (lower is better)
Translates to: SVLISSQTSNIWLAGTGLELTCP*PKATTK
Trigger: TTTGGTGGTGGCTTTTGGGCAAGGACAGGTCAATTC...CAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCACCTTTGTTTGTGGTTaGTCAGTACACTTTACCCTG +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGTFVCG*SVHFTL
Trigger: CAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGT...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TGGGGAGGTTCAGACTCTTGGAGCCAGAGGCTTCATGACCCCCACATTGTAATTGTCTCACTTTATCTCTaGACTGACAGTTGTGTTCGT +
Preference number: 4 (lower is better)
Translates to: WGGSDSWSQRLHDPHIVIVSLYL*TDSCVR
Trigger: ACGAACACAACTGTCAGTGCAGAGATAAAGTGAGAC...AATTACAATGTGGGGGTCATGAAGCCTCTGGCTCCAAGAGTCTGAACCTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEAVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: QETMKKSEGACLPKRVCSLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...GCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 4 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEAVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: FLKSGHTISICRTLGPKVALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GTTTGGTACGTTTCTTTCTTCCCTGTACTTGGAGTTGCTGGGATGCTGCTGATGGTTCATACTCCAGGATaGCTAACCCTCTCTTCTACC +
Preference number: 4 (lower is better)
Translates to: VWYVSFFPVLGVAGMLLMVHTPG*LTLSST
Trigger: GGTAGAAGAGAGGGTTAGCCATCCTGGAGTATGAAC...CATCAGCAGCATCCCAGCAACTCCAAGTACAGGGAAGAAAGAAACGTACCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACAGGAGGTTCTGTTGTaGCCAGGAGTTCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEQEVLL*PGVQDQ
Trigger: CTGATCTTGAACTCCTGGCCACAACAGAACCTCCTG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR CCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAGAAGGTGCTTTGGTCTaGCTCCCAGGAGAATTCGAT +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKEGALV*LPGEFD
Trigger: ATCGAATTCTCCTGGGAGCCAGACCAAAGCACCTTC...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTCATAACTGGGATAGGTaGGCCAGTTGGACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAHNWDR*ASWTES
Trigger: ACTTTCTGTCCAACTGGCTCACCTATCCCAGTTATG...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACATAACTGGGATAGGTaGGCCAGTTGGACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEHNWDR*ASWTES
Trigger: ACTTTCTGTCCAACTGGCTCACCTATCCCAGTTATG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636767.2
ENST00000637397.2
CDS-3UTR TCA 90 bp CAGCCAGCCCAGGCTTCAGAATTCAGCTCAGATGTGATCTTTGTTGACCTGCCTCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: QPAQASEFSSDVIFVDLPQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...AGGCAGGTCAACAAAGATCACATCTGAGCTGAATTCTGAAGCCTGGGCTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYADIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATCCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CAAGAGACTCAACAGAAATTCTTTAGTTGGCAAATGTGGTTTGAAGGGGTAATATGGCAGGCACTGGTCTaGGGACCACACTTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QETQQKFFSWQMWFEGVIWQALV*GPHFGA
Trigger: AGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCA...TATTACCCCTTCAAACCACATTTGCCAACTAAAGAATTTCTGTTGAGTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635915.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAACTCCTGACCTCAAGTaGTCCGTCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LKPRSPNSLTLANIVRISTPDLK*SVHLGL
Trigger: GAGGCCAAGGTGGACGGATCACTTGAGGTCAGGAGT...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGGCACAAGATATTTCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAGTRYF*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGAAATATCTTGTGCC...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616833.6
CDS-3UTR TCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTGATGGGTGGATCACTTaGGGTCCGGAGTTCGATACT +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSDGWIT*GPEFDT
Trigger: AGTATCGAACTCCGGACCTCAAGTGATCCACCCATC...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp CTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCAAAGCGCCTCCAGGCTaGAGACTGGACAAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LVSCWPKNRCFISQISRFKAPPG*RLDKSG
Trigger: ACCGCTTTTGTCCAGTCTTCAGCCTGGAGGCGCTTT...GAACCTACTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR TCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGATTTGAAGGGCACCTaGAGGATTCCGTGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQDLKGT*RIPWPH
Trigger: GTGGGGCCACGGAATCCTTCAGGTGCCCTTCAAATC...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAGGTGTCAACAAACGTTaGGTGAACGAGAATGTGTAT +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIGVNKR*VNENVY
Trigger: ATACACATTCTCGTTCACTCAACGTTTGTTGACACC...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATGGTCCTTTTGTATCTTaGCCTCCACCTGTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDGPFVS*PPPVSC
Trigger: GCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACC...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATGAGGAAAGGACAGTATaGGGTCAGCCTGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDEERTV*GQPEVL
Trigger: GAGCACCTCAGGCTGACCTCATACTGTCCTTTCCTC...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGTTCCCAACAACAGAGTaGAGGGATGCCACCCCTAAA +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKFPTTE*RDATPK
Trigger: TTTAGGGGTGGCATCCCTTCACTCTGTTGTTGGGAA...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636767.2
ENST00000637397.2
CDS-3UTR GCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGGTAGAAGTTCGTGTTaGCTGAGTTTAGCCACTAGA +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSGRSSC*LSLATR
Trigger: TCTAGTGGCTAAACTCAGGCAACACGAACTTCTACC...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTTCTTCAACTTTCAAATaGCACCACTATCCTTATGAG +
Preference number: 4 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSSSTFK*HHYPYE
Trigger: CTCATAAGGATAGTGGTGGCATTTGAAAGTTGAAGA...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp TGCCAAGTTGGAAAAGTTCATACCATTCCATTGTGTAGTTCTTGCCAGTTAATGAACTTTGCTCTCAAGTaGGCTCCGAGCGTCACCCGG +
Preference number: 4 (lower is better)
Translates to: CQVGKVHTIPLCSSCQLMNFALK*APSVTR
Trigger: CCGGGTGACGCTCGGAGCGCACTTGAGAGCAAAGTT...CATTAACTGGCAAGAACTACACAATGGAATGGTATGAACTTTTCCAACTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR GCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTCTGCCACTACCCGAGTaGTGCCGAATCTACCCCCTC +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLLPLPE*CRIYPL
Trigger: GAGGGGGTAGATTCGGCAGCACTCGGGTAGTGGCAG...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp GCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: AAMFLHTPVRRTAEALCYVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...ATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636767.2
ENST00000637397.2
CDS-3UTR CCA 90 bp GACTATACATTGGGTACAGTGTACACTGCTCGGGTGATGGGTGCGCAAAAATCTATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: DYTLGTVYTARVMGAQKSISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...AGATTTTTGCGCACCCATCACCCGAGCAGTGTACACTGTACCCAATGTATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGAGCCTCACGTGTAGCTaGGATTACAGGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLSLTCS*DYRHGP
Trigger: TGGTCCATGCCTGTAATCCCAGCTACACGTGAGGCT...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp TGGAAATGTTTTAGGCCGAGTTCATACTCCAGGATGGCTAACCCTCTCTTCTACCACATAAAGTATGAATaGCTGCCTGAGGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: WKCFRPSSYSRMANPLFYHIKYE*LPEEPL
Trigger: CAGTGGCTCCTCAGGCAGCCATTCATACTTTATGTG...GTAGAAGAGAGGGTTAGCCATCCTGGAGTATGAACTCGGCCTAAAACATTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGCAGGAGGTTCTGTTGTaGCCAGGAGTTCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKQEVLL*PGVQDQ
Trigger: CTGATCTTGAACTCCTGGCCACAACAGAACCTCCTG...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAATAATTGGAGTACTTTaGGAAGCCGAGGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEIIGVL*EAEAGG
Trigger: ACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTAT...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR CCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAACTGTGACACAACCATaGGTCCAGGTAACCAAGTGT +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKTVTQP*VQVTKC
Trigger: ACACTTGGTTACCTGGACCCATGGTTGTGTCACAGT...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635915.1
CDS-3UTR CCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGTTGCCAGGAGCAATTTaGGGAGGTTCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKLPGAI*GGSDSW
Trigger: CCAAGAGTCTGAACCTCCCCAAATTGCTCCTGGCAA...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp AGGAGGGGTCTTTTTGTGAAACGGCGGTTACCAGTTTaGTTTCAGAGTCAAACCGTGAACCGAATTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RRGLFVKRRLPV*FQSQTVNRIPS
Trigger: GGAAGGAATTCGGTTCACGGTTTGACTCTGAAACAAAACTGGTAACCGCCGTTTCACAAAAAGACCCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp GCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATGTTGAACATGTTTCCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: AAMFLHTPVRRTAEALCYVEHVS*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGGAAACATGTTCAAC...ATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
CDS-3UTR TCA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCCAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 4 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCGCCTGTTTGCCTTTGTaGACAGGGAAAAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: ELQETMKKSEGACLPKRVACLPL*TGKKHV
Trigger: CACATGCTTTTTCCCTGTTCACAAAGGCAAACAGGC...GACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGTAGAACTGCCATTTaGTCCAGCAATCCCAGTACT +
Preference number: 4 (lower is better)
Translates to: KNRYWRDVGEREHFFSAASRTAI*SSNPST
Trigger: AGTACTGGGATTGCTGGATCAAATGGCAGTTCTACT...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACAATGGCCAAGAAACATaGAAATGCTCAGGGAAATGC +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHNGQET*KCSGKC
Trigger: GCATTTCCCTGAGCATTTTCATGTTTCTTGGCCATT...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp TGGAAATGTTTTAGGCCGAGTTCATACTCCAGGATGGCTAACCCTCTCTTCTACCCTCAGTTTTATTCCTaGTTCTGCTACATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: WKCFRPSSYSRMANPLFYPQFYS*FCYIQL
Trigger: GAGCTGGATGTAGCAGAATCAGGAATAAAACTGAGG...GTAGAAGAGAGGGTTAGCCATCCTGGAGTATGAACTCGGCCTAAAACATTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAACCAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGAATCAAACCATGTCTCTaGCCCCTTTTCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KPRVLFPVGPKTDVSFPRIKPCL*PLFWAG
Trigger: GCCAGCCCAGAAAAGGGGGCAGAGACATGGTTTGAT...TCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTATGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: AAILLMCILTLCTKEERLCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTTGGAACCAGCTCAAATaGCCATCAATCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAWNQLK*PSINEW
Trigger: CCACTCATTGATTGATGGGCATTTGAGCTGGTTCCA...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGACATCCTGTCACTGTGTaGAAACCTCTTTGGTTACTC +
Preference number: 4 (lower is better)
Translates to: MGKGVNWPGMKERTANDGHPVTV*KPLWLL
Trigger: GAGTAACCAAAGAGGTTTGCACACAGTGACAGGATG...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp CAACAATGCAGCACTTGCAACACAATTCCAACTTTCAGCAACTTTCCAATACATCTGGGCCCCAAACACTaGATCCTGTCACTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QQCSTCNTIPTFSNFPIHLGPKH*ILSLCA
Trigger: TGCACACAGTGACAGGATGCAGTGTTTGGGGCCCAG...ATGTATTGGAAAGTTGCTGAAAGTTGGAATTGTGTTGCAAGTGCTGCATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp TATTACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGATGACCTCTCCACCTaGCACGTTAAGTCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: YYCYENKHHTPSTLCVWYDDLST*HVKSFQ
Trigger: TTGGAAGGACTTAACGTGGCAGGTGGAGAGGTCATC...GTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAACCAGACAGCAGTTTTaGAGGGCCTTAGACCGGGAC +
Preference number: 4 (lower is better)
Translates to: LKPRSPNSLTLANIVRISTRQQF*RALDRD
Trigger: GTCCCGGTCTAAGGCCCTGCAAAACTGCTGTCTGGT...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTCAGGCAGGTGTTCCTTaGTTGGATCTGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: RTLKACLALIKAQLLGDLQAGVP*LDLSLH
Trigger: GTGAAGTGACAGATCCAAGCAAGGAACACCTGCCTG...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp ACCACTGCCTGTTATAAAACAGAAGTTAAGAATAGGCTTTGGCAGTTAGTTCTTCCTCCACCTGTCTCTTaGTGGTCACTCACGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TTACYKTEVKNRLWQLVLPPPVS*WSLTWS
Trigger: GCTCCACGTGAGTGACCAGCAAGAGACAGGTGGAGG...AAGAACTAACTGCCAAAGCCTATTCTTAACTTCTGTTTTATAACAGGCAGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TGGGGAGGTTCAGACTCTTGGAGCCAGAGGCTTCATGACCCCCACATTGTAATTAGGATGAAACAGGATTaGTTAAGTTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: WGGSDSWSQRLHDPHIVIRMKQD*LSSGVQ
Trigger: TTGAACTCCTGAACTTAAGCAATCCTGTTTCATCCT...AATTACAATGTGGGGGTCATGAAGCCTCTGGCTCCAAGAGTCTGAACCTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACATAAGGATCAGGTTTTaGACGGAAGTCAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHIRIRF*TEVKAL
Trigger: AAGCGCTTTGACTTCCGTCCAAAACCTGATCCTTAT...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp GACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: DSFVGRGRTTGNNEEVRRISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...CCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAAATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SCIPRLEEPLKHYAISLKISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...TTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGAATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MGKGVNWPGMKERTANDGISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp GATCCTTCCACCACCTCAGTTTCGCAAAGTGATAGGATTACAGGCGTAAGCCACACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: DPSTTSVSQSDRITGVSHTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...GTGGCTTACGCCTGTAATCCTATCACTTTGCGAAACTGAGGTGGTGGAAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAGCTCACAGCTATAATTaGAGTACTTTGGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEAHSYN*STLGSR
Trigger: TCGGCTTCCCAAAGTACTCCAATTATAGCTGTGAGC...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR CCA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCAATTCGATCCAGACCTaGGGCGTCATCTTTTATGAA +
Preference number: 4 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSNSIQT*GVIFYE
Trigger: TTCATAAAAGATGACGCCCCAGGTCTGGATCGAATT...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp TGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGGCTGATTGGTCAGTTTaGAGATGGAATTATAAGGGG +
Preference number: 4 (lower is better)
Translates to: WVHLVRCPDRTDLSRWELADWSV*RWNYKG
Trigger: CCCCTTATAATTCCATCTCCAAACTGACCAATCAGC...CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp CCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTCATAACTGGGATAGGTaGGCCAGTTGGACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PRSPNSLTLANIVRISASHNWDR*ASWTES
Trigger: ACTTTCTGTCCAACTGGCTCACCTATCCCAGTTATG...AGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CAAGAGACTCAACAGAAATTCTTTAGTTGGCAAATGTGGTTTGAAGGGGTAATAAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QETQQKFFSWQMWFEGVIKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...TATTACCCCTTCAAACCACATTTGCCAACTAAAGAATTTCTGTTGAGTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GATCCTTCCACCACCTCAGTTTCGCAAAGTGATAGGATTACAGGCGTAAGCCACGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: DPSTTSVSQSDRITGVSHDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...GTGGCTTACGCCTGTAATCCTATCACTTTGCGAAACTGAGGTGGTGGAAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTCAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 4 (lower is better)
Translates to: LWEEGELQETMKKSEGACQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTTGATTACACCAGAAAGGGGCATCCATTTCAGGTCGGAGATGGGGAAATGTACAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LDYTRKGHPFQVGDGEMYSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...GTACATTTCCCCATCTCCGACCTGAAATGGATGCCCCTTTCTGGTGTAATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000635915.1
CDS-3UTR TCA 90 bp CAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QETMKKSEGACLPKRVCSSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...GCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGACCTCTTCCACTGCGCTaGCAGCTTTGTGGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LICSNSADVHFNFMHQGRPLPLR*QLCGKR
Trigger: CCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGG...TCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAATTCTCCCTCTGTATTTaGGGAAGATATCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKFSLCI*GRYLVT
Trigger: AGTCACCAGATATCTTCCTCAAATACAGAGGGAGAA...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp CAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCAGGAGCCACCAATATTaGGGGTTCCAAATAAAGTTA +
Preference number: 4 (lower is better)
Translates to: QETMKKSEGACLPKRVCSRSHQY*GFQIKL
Trigger: TAACTTTATTTGGAACCCTCAATATTGGTGGCTCCT...GCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCAGGAAGACGTTCATGTaGAGAAGGTTCAAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSRKTFM*RRFKPP
Trigger: TGGAGGCTTGAACCTTCTTCACATGAACGTCTTCCT...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TCTGTACTTATTTCCTCACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTGTTAAGAACTTTAGGCTaGAAGGAAGACGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: SVLISSQTSNIWLAGTGLLRTLG*KEDVHV
Trigger: CACATGAACGTCTTCCTTTCAGCCTAAAGTTCTTAA...CAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCGAGGTTGCAGCAAGCTaGGATTGTGTCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: YSSTICNCKNMEPAQMPIEVAAS*DCVIAL
Trigger: GAGTGCAATGACACAATCTCAGCTTGCTGCAACCTC...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTTCCTGGCCAACATGGTaGAACCCTGATATAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSSWPTW*NPDIVA
Trigger: AGCAACTATATCAGGGTTTCACCATGTTGGCCAGGA...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAGCTTTGGTAGAAGATTaGAGTAGGGCGTTGCAATAT +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEALVED*SRALQY
Trigger: ATATTGCAACGCCCTACTTCAATCTTCTACCAAAGC...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTTTCGGTAGCCGGAGATaGCCACCACAATCCATTGGA +
Preference number: 4 (lower is better)
Translates to: SASLQEKSPEMLICSNSAFGSRR*PPQSIG
Trigger: TCCAATGGATTGTGGTGGTCATCTCCGGCTACCGAA...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAATGTGTATTTGGAGCTaGGGGTGCAGGGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: MLVCLKNTSQLLASSKISMCIWS*GCRAGG
Trigger: ACCCCCAGCCCTGCACCCTCAGCTCCAAATACACAT...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp TGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGGAGAGCTGCATACTTTaGGAATGCTTTAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: WVHLVRCPDRTDLSRWELESCIL*ECFNSC
Trigger: ACAGGAATTAAAGCATTCTCAAAGTATGCAGCTCTC...CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCACCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAATGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATCACTTCCAACCTTCTTaGCATTGCCAAAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDHFQPS*HCQRSA
Trigger: GGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTG...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp ACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAATCTTGGCTCTTAGCCTaGCCTTATCCTTTTTCACTC +
Preference number: 4 (lower is better)
Translates to: TLSVAQTEPIYQDGNCNESWLLA*PYPFSL
Trigger: GAGTGAAAAAGGATAAGGGCAGGCTAAGAGCCAAGA...TTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATAAGGATCAGGTTTTaGACGGAAGTCAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKIRIRF*TEVKAL
Trigger: AAGCGCTTTGACTTCCGTCCAAAACCTGATCCTTAT...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: WVHLVRCPDRTDLSRWELVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...CAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 4 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATATTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATGAGCAGGAAACCACTTaGATAATAAAGGGTAAATAT +
Preference number: 4 (lower is better)
Translates to: AAMFLHTPVRRTAEALCYEQETT*IIKGKY
Trigger: ATATTTACCCTTTATTATCCAAGTGGTTTCCTGCTC...ATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACATTCTCACTTGTAAGTaGGAGCTAAGCTATGAGGAT +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHILTCK*ELSYED
Trigger: ATCCTCATAGCTTAGCTCCCACTTACAAGTGAGAAT...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTGCATTTGCAGCAACCTaGAATAATGGTCTCCAATTC +
Preference number: 4 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAAFAAT*NNGLQF
Trigger: GAATTGGAGACCATTATTCCAGGTTGCTGCAAATGC...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCATACAAAAATTAGCTTaGCATGGTGGCGGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: YSSTICNCKNMEPAQMPIIQKLA*HGGGRL
Trigger: CAGGCGCCCGCCACCATGCCAAGCTAATTTTTGTAT...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp CAAGTAAGTCATGTTACCTGGCTGAGCCTCAATTCCTTATTTGCAGAGAATGAGGAGGTGTGGGAAATGTaGAGCTTCACTGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: QVSHVTWLSLNSLFAENEEVWEM*SFTVAK
Trigger: CTTTGCAACAGTGAAGCTCCACATTTCCCACACCTC...CTCATTCTCTGCAAATAAGGAATTGAGGCTCAGCCAGGTAACATGACTTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATGCTCACAGCTATAATTaGAGTACTTTGGGAAGCCGA +
Preference number: 4 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDAHSYN*STLGSR
Trigger: TCGGCTTCCCAAAGTACTCCAATTATAGCTGTGAGC...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGAAGAAGGTAGTGTTTTaGTTGGGTGTGGTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKKKVVF*LGVVAH
Trigger: GTGAGCTACCACACCCAACCAAAACACTACCTTCTT...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp CTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCCTCCAGGCTGAAGACTaGACAAAAGCGGTGACAATC +
Preference number: 4 (lower is better)
Translates to: LVSCWPKNRCFISQISRFLQAED*TKAVTI
Trigger: GATTGTCACCGCTTTTGTCCAGTCTTCAGCCTGGAG...GAACCTACTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR CCA 90 bp GCGCTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGATCTGTCACTTCACTaGAAAGAAGTTTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: ALTALWEEGELQETMKKSDLSLH*KEVSAS
Trigger: TGATGCAGAAACTTCTTTCCAGTGAAGTGACAGATC...TGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATCGTGGAGCTTTTACTTaGGTCCTATGGAACTACAGA +
Preference number: 4 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDRGAFT*VLWNYR
Trigger: TCTGTAGTTCCATAGGACCCAAGTAAAAGCTCCACG...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATCCACCTGTCTCTTGCTaGTCACTCACGTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNPPVSC*SLTWSF
Trigger: AAAGCTCCACGTGAGTGACCAGCAAGAGACAGGTGG...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATCAGTGCACTCCAGCCTaGGTGACAAGAACAGTACTC +
Preference number: 4 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNQCTPA*VTRTVL
Trigger: GAGTACTGTTCTTGTCACCCAGGCTGGAGTGCACTG...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAAAAGCAGGCAGCGCCTTaGTTACACCAGAAAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVEKQAAP*LHQKGA
Trigger: TGCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTT...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LWEEGELQETMKKSEGACTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAAGGAGCCACCAATATTaGGGGTTCCAAATAAAGTTA +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKRSHQY*GFQIKL
Trigger: TAACTTTATTTGGAACCCTCAATATTGGTGGCTCCT...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTGTCTTTAAGGGTCCTTaGACCCAACCAGTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSVFKGP*TQPVFL
Trigger: TAAAAAGACTGGTTGGGTTCAAGGACCCTTAAAGAC...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACAGCCATAAAAAGGAATaGAATAATGGCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHSHKKE*NNGICS
Trigger: GCTGCAAATGCCATTATTTCATTCCTTTTTATGGCT...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGAAGTCCTGGGGTTCACTaGATAATTATTGTCACAACA +
Preference number: 4 (lower is better)
Translates to: MGKGVNWPGMKERTANDGSPGVH*IIIVTT
Trigger: TGTTGTGACAATAATTATTCAGTGAACCCCAGGACT...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp GGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTCCAGGTGATTTTAATAACTGTTCCTGGCCAACATGGTaGAACCCTGATATAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GDSKSSLPVSSPGDFNNCSWPTW*NPDIVA
Trigger: AGCAACTATATCAGGGTTTCACCATGTTGGCCAGGA...ACAGTTATTAAAATCACCTGGACTGCTCACAGGAAGAGAAGACTTAGAATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR TCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACTAATTTGGGAACCATaGATGGAGCTAATGGAAAGA +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLELIWEP*MELMER
Trigger: TCTTTCCATTAGCTCCATTCATGGTTCCCAAATTAG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR TCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTCTTCGGATCAGGTTCTaGTCAGGTTCAAACCAGAGC +
Preference number: 4 (lower is better)
Translates to: SASLQEKSPEMLICSNSALRIRF*SGSNQS
Trigger: GCTCTGGTTTGAACCTGATCAGAACCTGATCCGAAG...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR TCA 90 bp TGCTCTAGAAGGCTGGCTATTACTGTTATGAGAACAAGCACCATACCCCATCCACTCAGTTTCTCCATCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: CSRRLAITVMRTSTIPHPLSFSI*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGATGGAGAAACTGAG...TGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATAGCCAGCCTTCTAGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGCCCTCCAGGTCTCTTaGTTACATATGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQALQVS*LHMGLS
Trigger: ACTGAGTCCCATATGTAATCAAGAGACCTGGAGGGC...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp ACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAAGCTTAACTGGAGCATaGAGTTGGTTTTGTAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLSVAQTEPIYQDGNCNESLTGA*SWFCRE
Trigger: CTCTCTACAAAACCAACTTCATGCTCCAGTTAAGCT...TTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR GCA 90 bp TCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAACTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: SCIPRLEEPLKHYAISLKLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...TTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: QETMKKSEGACLPKRVCSYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...GCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGACTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACTGCAACCTCTTCCACTaGGCTGACAGCTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNCNLFH*ADSFVG
Trigger: TCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCA...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCACAGGAAAATTCCAGCTaGTTGCTGACACCCAACTTT +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPQENSS*LLTPNF
Trigger: AAAGTTGGGTGTCAGCAAGCAGCTGGAATTTTCCTG...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTGATAGTAATGAGCTTTaGACAGACTCCAACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSDSNEL*TDSNPS
Trigger: ACTGGGGTTGGAGTCTGTGCAAAGCTCATTACTATC...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTGTTGAACATGTTTCCTaGATTTCACAACAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LWEEGELQETMKKSEGACVEHVS*ISQQES
Trigger: GGATTCCTGTTGTGAAATGCAGGAAACATGTTCAAC...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616833.6
CDS-3UTR GCA 90 bp AGGAGCCACTGCTCTAGAAGGCTGGCTATTACTGTTATGAGAACAAGCACCATACAACAATGCAGCACTTaGAACACAATTCCAACTTTC +
Preference number: 4 (lower is better)
Translates to: RSHCSRRLAITVMRTSTIQQCST*NTIPTF
Trigger: GAAAGTTGGAATTGTGTTGCAAGTGCTGCATTGTTG...TATGGTGCTTGTTCTCATAACAGTAATAGCCAGCCTTCTAGAGCAGTGGCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CCA 90 bp GATCCTTCCACCACCTCAGTTTCGCAAAGTGATAGGATTACAGGCGTAAGCCACTCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: DPSTTSVSQSDRITGVSHSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...GTGGCTTACGCCTGTAATCCTATCACTTTGCGAAACTGAGGTGGTGGAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: LWEEGELQETMKKSEGACSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 4 (lower is better)
Translates to: FLHTPVRRTAEALCYQLKVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...TTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GTTTGGTACGTTTCTTTCTTCCCTGTACTTGGAGTTGCTGGGATGCTGCTGATGTACTTCCTCAAGTCCTaGGGTTCACTGAATAATTAT +
Preference number: 4 (lower is better)
Translates to: VWYVSFFPVLGVAGMLLMYFLKS*GSLNNY
Trigger: ATAATTATTCAGTGAACCCCAGGACTTGAGGAAGTA...CATCAGCAGCATCCCAGCAACTCCAAGTACAGGGAAGAAAGAAACGTACCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp GCTGAACTCTTTTCATTACTAACCAACAATGCAGCACTTGCAACACAATTCCAATGTACTTGGAGTTGCTaGGATGCTGCTGATGACCTC +
Preference number: 4 (lower is better)
Translates to: AELFSLLTNNAALATQFQCTWSC*DAADDL
Trigger: GAGGTCATCAGCAGCATCCCAGCAACTCCAAGTACA...TTGGAATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAATGAAAAGAGTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTCATAGATACTCATTTTaGGGCTTCCAGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSHRYSF*GFQSRL
Trigger: CAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATG...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCATTACCAAGGCTAAACTaGCTTCTTCAAAGACCTGCC +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPLPRLN*LLQRPA
Trigger: GGCAGGTCTTTGAAGAAGCCAGTTTAGCCTTGGTAA...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACTCGACCAAGCTTTATaGATTTACCAAAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLELDQAL*IYQRYL
Trigger: CAGATACCTTTGGTAAATCCATAAAGCTTGGTCGAG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR CCA 90 bp TGTACAAGGTCCTTTTGTATCTTGACCTCCACCTGTCTCTTGCTGGTCACTCACGTACACTTTACCCTGTaGAATACTTGCTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: CTRSFCILTSTCLLLVTHVHFTL*NTCSNV
Trigger: AACATTTGAGCAAGTATTCCACAGGGTAAAGTGTAC...GTGAGTGACCAGCAAGAGACAGGTGGAGGTCAAGATACAAAAGGACCTTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGTGCTGGTCACTCACGTaGAGCTTTTACTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLFLLTSGFSDLETLILRCWSLT*SFYLGP
Trigger: AGGACCCAAGTAAAAGCTCCACGTGAGTGACCAGCA...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp TCTGGATGGTGTCAGCTGATCCATCTAGTGCAGGGTTaGCAAAATATCTCAAGCACTGTTCTTAGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: SGWCQLIHLVQG*QNISSTVLRFY
Trigger: GTAAAACCTAAGAACAGTGCTTGAGATATTTTGCAAACCCTGCACTAGATGGATCAGCTGACACCATCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR TCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LTALWEEGELQETMKKSETREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTCAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 4 (lower is better)
Translates to: RTLKACLALIKAQLLGDLQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LTALWEEGELQETMKKSESLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RTLKACLALIKAQLLGDLNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAACTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQLSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCTTCTCCCTCTGTATTTaGGGAAGATATCTGGTGACT +
Preference number: 4 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLFSLCI*GRYLVT
Trigger: AGTCACCAGATATCTTCCTCAAATACAGAGGGAGAA...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAATTCCAGCTGCTTGCTaGCACCCAACTTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: AAILLMCILTLCTKEERLIPAAC*HPTLKR
Trigger: CCTTTTTAAAGTTGGGTGTCAGCAAGCAGCTGGAAT...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTCTTATTTGCAGAGAATaGGTATCTTATCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFLICRE*VSYPLH
Trigger: GTGGAGAGGATAAGATACTCATTCTCTGCAAATAAG...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp AGGAGCCACTGCTCTAGAAGGCTGGCTATTACTGTTATGAGAACAAGCACCATATGGTTTAAGGCACATTaGTTAGAAAGTAGCAGGAAA +
Preference number: 4 (lower is better)
Translates to: RSHCSRRLAITVMRTSTIWFKAH*LESSRK
Trigger: TTTCCTGCTACTTTCTAATCAATGTGCCTTAAACCA...TATGGTGCTTGTTCTCATAACAGTAATAGCCAGCCTTCTAGAGCAGTGGCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATTCCTGGCCAACATGGTaGAACCCTGATATAGTTGCT +
Preference number: 4 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNSWPTW*NPDIVA
Trigger: AGCAACTATATCAGGGTTTCACCATGTTGGCCAGGA...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTGCTTTGGTAGAAGATTaGAGTAGGGCGTTGCAATAT +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSALVED*SRALQY
Trigger: ATATTGCAACGCCCTACTTCAATCTTCTACCAAAGC...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATCTGAAATGTAATGTCTaGTTTGAAGGGCACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNLKCNV*FEGHLK
Trigger: CTTCAGGTGCCCTTCAAATCAGACATTACATTTCAG...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp GGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTCCAGGTGATTTTAATAACTGTAGTCTTCTCTTCCTGTaGGCAGTCCAGGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: GDSKSSLPVSSPGDFNNCSLLFL*AVQVIL
Trigger: TAAAATCACCTGGACTGCTCACAGGAAGAGAAGACT...ACAGTTATTAAAATCACCTGGACTGCTCACAGGAAGAGAAGACTTAGAATCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR TCA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGAGATGGGAATTGCAATaGAGAAAGAGTAATTCACGC +
Preference number: 4 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKRWELQ*RKSNSR
Trigger: GCGTGAATTACTCTTTCTTCATTGCAATTCCCATCT...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp AATGTACTTCTGAATCCAATGGCATCATGCATAATTTTCTGCCTGCCCTGCCACCTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: NVLLNPMASCIIFCLPCHLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...GTGGCAGGGCAGGCAGAAAATTATGCATGATGCCATTGGATTCAGAAGTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR GCA 90 bp GACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: DSFVGRGRTTGNNEEVRRYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...CCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCTGTACTTATTTCCTCACAGACCAGTAACATCTGGTTGGCAGGCACTGGTCTGTTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVLISSQTSNIWLAGTGLLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...CAGACCAGTGCCTGCCAACCAGATGTTACTGGTCTGTGAGGAAATAAGTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTAGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TTCTGCACAGCCAAAGGAACAATCAGCAGAGTAAATAGACAACCCACAGAGTGGAGCACAATTTGCAACTaGAAAAATATGGAACCAGCT +
Preference number: 4 (lower is better)
Translates to: FCTAKGTISRVNRQPTEWSTICN*KNMEPA
Trigger: AGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCT...CCACTCTGTGGGTTGTCTATTTACTCTGCTGATTGTTCCTTTGGCTGTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAATTTTCTGCCTGCCCTaGCACTTCTGGGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: MLICSNSADVHFNFMHQGIFCLP*HFWASS
Trigger: AGAAGAGGCCCAGAAGTGGCAGGGCAGGCAGAAAAT...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR GCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAATTGAAGTAGGGCGTTaGAATATTTTGGAAATCCCA +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEIEVGR*NILEIP
Trigger: TGGGATTTCCAAAATATTGCAACGCCCTACTTCAAT...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR GCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCACCTTTGCCCACTTGCTaGTCCAGGTTTGGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: MLVCLKNTSQLLASSKISPLPTC*SRFGGF
Trigger: AAAACCCCCAAACCTGGAGCAGCAAGTGGGCAAAGG...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp GAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCGTACATTCAGGGCCTTaGCATAGTCACTTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: ELQETMKKSEGACLPKRVVHSGP*HSHLFL
Trigger: TAAAAACAAGTGACTATGGCAAGGCCCTGAATGTAC...GACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTATAAGGATCAGGTTTTaGACGGAAGTCAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSIRIRF*TEVKAL
Trigger: AAGCGCTTTGACTTCCGTCCAAAACCTGATCCTTAT...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAATAAGGATCAGGTTTTaGACGGAAGTCAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPIRIRF*TEVKAL
Trigger: AAGCGCTTTGACTTCCGTCCAAAACCTGATCCTTAT...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCTTAAAATCTGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: CIPRLEEPLKHYAISLKSVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...AGATTTTAAGCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGACTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAGGAATTCACTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: LLMCILTLCTKEERLRNSLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...TGAATTCCTTAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTGCGCTGACAGCTTTGTaGGAAGAGGGAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFALTAL*EEGELQ
Trigger: CTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGC...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTGCAGCAAAACTTAATTaGCAGATTTCTGCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSAAKLN*QISAWL
Trigger: TAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGC...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACCCATCAATCAATGAGTaGATAAAGAAAATGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHPSINE*IKKMWC
Trigger: ACACCACATTTTCTTTATCCACTCATTGATTGATGG...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp AAGGGTCGGAGAGGGGTGAGGGATAAAAGACTATACATTGGGTACAGTGTACACCTATGGAAAACAGTGTaGAGATTCCTTAAAGAACTA +
Preference number: 4 (lower is better)
Translates to: KGRRGVRDKRLYIGYSVHLWKTV*RFLKEL
Trigger: TAGTTCTTTAAGGAATCTCCACACTGTTTTCCATAG...GTGTACACTGTACCCAATGTATAGTCTTTTATCCCTCACCCCTCTCCGACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGATAATTGGAGTACTTTaGGAAGCCGAGGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FLFLLTSGFSDLETLILRIIGVL*EAEAGG
Trigger: ACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTAT...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTGTTTCTTTTCTAAGGTaGACAGCAGCAAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSVSFLR*TAARNQ
Trigger: CTGATTCCTTGCTGCTGTCCACCTTAGAAAAGAAAC...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636525.2
3UTR CAA 72 bp TTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTaGCTCAAATGTTTTAACTTCCCCTTGCTAACTCCA +
Preference number: 4 (lower is better)
Translates to: LWLLSTLYPVEY*LKCFNFPLLTP
Trigger: TGGAGTTAGCAAGGGGAAGTTAAAACATTTGAGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCGTTGAACATGTTTCCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: FLKSGHTISICRTLGPKVVEHVS*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGGAAACATGTTCAAC...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
CDS-3UTR TCA 90 bp CTGACAGCTTTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGTTGAACATGTTTCCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: LTALWEEGELQETMKKSEVEHVS*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGGAAACATGTTCAAC...TTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAAAGCTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
CDS-3UTR TCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GTTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTCTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: VNTGFATSRSTITPVMVSLSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...AGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATCTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYLSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAAGGCTAAAGGAGGCGTaGAAGAAAGTTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: MLVCLKNTSQLLASSKISRLKEA*KKVLPL
Trigger: CAGAGGGAGAACTTTCTTTCACGCCTCCTTTAGCCT...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp CATTGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATAAGGCTAAAGGAGGCGTaGAAGAAAGTTCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HCFTGFQLILVIWAVVTIRLKEA*KKVLPL
Trigger: CAGAGGGAGAACTTTCTTTCACGCCTCCTTTAGCCT...TATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCCATAACCAAGTTCTTTaGTTTGCAGTTGACCAAAAC +
Preference number: 4 (lower is better)
Translates to: ELQETMKKSEGACLPKRVHNQVL*FAVDQN
Trigger: GTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATG...GACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATTTAAGAACTTTAGGCTaGAAGGAAGACGTTCATGTG +
Preference number: 4 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYLRTLG*KEDVHV
Trigger: CACATGAACGTCTTCCTTTCAGCCTAAAGTTCTTAA...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TTTACTCTCCTAGATTCTTTGCCCAGTGGTTTCAACTCATATCTTAGCTCCGATTATCTTAGCTCCGATTaGGAGCTGCATACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: FTLLDSLPSGFNSYLSSDYLSSD*ELHTLR
Trigger: TCTCAAAGTATGCAGCTCTCAATCGGAGCTAAGATA...ATCGGAGCTAAGATATGAGTTGAAACCACTGGGCAAAGAATCTAGGAGAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RTLKACLALIKAQLLGDLGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TATTACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: YYCYENKHHTPSTLCVWYGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...GTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp CCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 4 (lower is better)
Translates to: PRSPNSLTLANIVRISASPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...AGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTCTGCAGCCATGTTCCTaGATACCCCGGTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFLQPCS*IPRLEE
Trigger: TTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACGAAGAAGTCAGAAGGTaGCTGTTTACCCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: EKSPEMLICSNSADVHFNEEVRR*LFTQTC
Trigger: ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTC...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCCACATTAAGTCATATTaGTCAAAGGGCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: ELQETMKKSEGACLPKRVHIKSY*SKGSKT
Trigger: AGTTTTGCTGCCCTTTGAGCAATATGACTTAATGTG...GACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATTTTGGCCAGCCTGTTTaGCTTTGTGAACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNFGQPV*LCEQGK
Trigger: TTTTCCCTGTTCACAAAGGCAAACAGGCTGGCCAAA...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGATAGTAATGAGCTTTaGACAGACTCCAACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQDSNEL*TDSNPS
Trigger: ACTGGGGTTGGAGTCTGTGCAAAGCTCATTACTATC...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTGCCATTTGATCCAGCAATCATACCGCCTCACTCCTaGAAGAATGGCCATAATCAA +
Preference number: 4 (lower is better)
Translates to: VWRFLKELKVELPFDPAIIPPHS*KNGHNQ
Trigger: TTGATTATGGCCATTCTTGCAGGAGTGAGGCGGTAT...GATTGCTGGATCAAATGGCAGTTCTACTTTTAGTTCTTTAAGGAATCTCCACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGAATTACTAACCAACAATaGAGCACTTGCAACACAATT +
Preference number: 4 (lower is better)
Translates to: MGKGVNWPGMKERTANDGITNQQ*STCNTI
Trigger: AATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAAT...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGATCCTTACTTCTCAAATaGTATGGTATATTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: MGKGVNWPGMKERTANDGSLLLK*YGILSP
Trigger: TGGAGACAATATACCATAGCATTTGAGAAGTAAGGA...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACAGGTTCAGGCTGGGCTaGATTTTACCATACGTTTGT +
Preference number: 4 (lower is better)
Translates to: EKSPEMLICSNSADVHFNRFRLG*ILPYVC
Trigger: ACAAACGTATGGTAAAATGCAGCCCAGCCTGAACCT...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR GCA 90 bp TTGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTTTTCTTAGCCCTCTCTaGCACTTACAGATTACCACT +
Preference number: 4 (lower is better)
Translates to: LLPLFVVAQYTLPCGILAFLSPL*HLQITT
Trigger: AGTGGTAATCTGTAAGTGGCAGAGAGGGCTAAGAAA...AGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp AGACTAGAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGCATTTGGAGATCAGGAGGTCAGCCTGAGGTaGTCCATTAATTACAGTAGA +
Preference number: 4 (lower is better)
Translates to: RLEFCYYSNQSSRAFGDQEVSLR*SINYSR
Trigger: TCTACTGTAATTAATGGAGCACCTCAGGCTGACCTC...CTGATCTCCAAATGCTCGGGAAGACTGATTTGAGTAATAACAAAACTCTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp CTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAGGAATTCAATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LLMCILTLCTKEERLRNSISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...TGAATTCCTTAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTCTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 4 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp CACACTATAATTTCTACCCCACACATAGATAGTAATGAGCTTTGCACAGACTCCGCAGCAAAACTTAATTaGCAGATTTCTGCGTGGCTA +
Preference number: 4 (lower is better)
Translates to: HTIISTPHIDSNELCTDSAAKLN*QISAWL
Trigger: TAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGC...GGAGTCTGTGCAAAGCTCATTACTATCTATGTGTGGGGTAGAAATTATAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCGCAACTGCAAAAATATaGAACCAGCTCAAATGCCCA +
Preference number: 4 (lower is better)
Translates to: YSSTICNCKNMEPAQMPIATAKI*NQLKCP
Trigger: TGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGC...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTAACCCACTTTGCCATTTaGTTGAACATGTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLTHFAI*LNMFPA
Trigger: TGCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616833.6
CDS-3UTR CCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAATAAGGATCAGGTTTTaGACGGAAGTCAAAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQIRIRF*TEVKAP
Trigger: AGGCGCTTTGACTTCCGTCCAAAACCTGATCCTTAT...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR CCA 90 bp GCTGAACTCTTTTCATTACTAACCAACAATGCAGCACTTGCAACACAATTCCAAGTGTGCAAACCTCTTTaGTTACTCCAACTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AELFSLLTNNAALATQFQVCKPL*LLQLES
Trigger: GGACTCAAGTTGGAGTAACCAAAGAGGTTTGCACAC...TTGGAATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAATGAAAAGAGTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAATATAAGGTGCCTCTTTaGGGTAGAATTCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEYKVPL*GRILIV
Trigger: TACTATAAGAATTCTACCCCAAAGAGGCACCTTATA...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTGAAATACTAGTTACATaGTATAGCGCCACCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSEILVT*YSATFK
Trigger: CTTGAAGGTGGCGCTATACCATGTAACTAGTATTTC...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR CCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAACCCACTTTGCCATTTaGTTGAACATGTTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPTHFAI*LNMFLS
Trigger: GCTTAGAAACATGTTCAACCAAATGGCAAAGTGGGT...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636780.2
CDS-3UTR CCA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAACTCTTTAAAAACACTTaGACTTATTTCAACTGCTCG +
Preference number: 4 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLELFKNT*TYFNCS
Trigger: CGAGCAGTTGAAATAAGTCCAAGTGTTTTTAAAGAG...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR TCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCACATAACTGGGATAGGTaGGCCAGTTGGACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: MLVCLKNTSQLLASSKISHNWDR*ASWTES
Trigger: ACTTTCTGTCCAACTGGCTCACCTATCCCAGTTATG...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AAACCAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGACAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: KPRVLFPVGPKTDVSFPRQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...TCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAGTTGAACATGTTTCCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPVEHVS*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGGAAACATGTTCAAC...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
CDS-3UTR TCA 90 bp CTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LVSCWPKNRCFISQISRFSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...GAACCTACTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EKSPEMLICSNSADVHFNNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AGGACCTTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RTLKACLALIKAQLLGDLMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...AAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAAGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCCTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: LVSCWPKNRCFISQISRFLSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...GAACCTACTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CACACTATAATTTCTACCCCACACATAGATAGTAATGAGCTTTGCACAGACTCCCTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: HTIISTPHIDSNELCTDSLSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...GGAGTCTGTGCAAAGCTCATTACTATCTATGTGTGGGGTAGAAATTATAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTACTCTCAGGAAGTACTTaGAAGTTGAAACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: AAILLMCILTLCTKEERLLSGST*KLKLNH
Trigger: GTGATTCAGTTTCAACTTTCAAGTACTTCCTGAGAG...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGCATAACCAAGTTCTTTaGTTTGCAGTTGACCAAAAC +
Preference number: 4 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLHNQVL*FAVDQN
Trigger: GTTTTGGTCAACTGCAAATCAAAGAACTTGGTTATG...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp GAACAGAATAAAGCCTGTTGTATTAGAACTGGGGATACTGTTCTTAGCATTCTTCTCTCCACTGAACCGTaGGTTAACATACCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: EQNKACCIRTGDTVLSILLSTEP*VNIPPN
Trigger: ATTTGGAGGTATGTTAACTCACGGTTCAGTGGAGAG...AAGAATGCTAAGAACAGTATCCCCAGTTCTAATACAACAGGCTTTATTCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp CATATGGACAAGCTCCTTACTTCTCAAATGCTATGGTATATTGTCTCCATTTTGTGGCTATTACTGTTATaGGAACAAGCACCATACCCC +
Preference number: 4 (lower is better)
Translates to: HMDKLLTSQMLWYIVSILWLLLL*EQAPYP
Trigger: GGGGTATGGTGCTTGTTCTCATAACAGTAATAGCCA...CAAAATGGAGACAATATACCATAGCATTTGAGAAGTAAGGAGCTTGTCCATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTACTCAGTTTCTCCATCTaGTATAGTTGCTACTTGAAC +
Preference number: 4 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLLSFSI*YSCYLN
Trigger: GTTCAAGTAGCAACTATATCAGATGGAGAAACTGAG...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636780.2
CDS-3UTR TCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGATCTAGCCCTGAGAGCTaGAATGTAATGTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRSSPES*NVMSDL
Trigger: CAAATCAGACATTACATTTCAGCTCTCAGGGCTAGA...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTATCAACAAACGTTGAGTaGACGAGAATGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: AAILLMCILTLCTKEERLSTNVE*TRMCIW
Trigger: CCAAATACACATTCTCGTTCACTCAACGTTTGTTGA...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR TCA 90 bp GGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTCCAGGTGATTTTAATAACTGTAGGGTGGAGGGTGGATaGTTGAAAGAATATTCTTTA +
Preference number: 4 (lower is better)
Translates to: GDSKSSLPVSSPGDFNNCRVEGG*LKEYSL
Trigger: TAAAGAATATTCTTTCAATCATCCACCCTCCACCCT...ACAGTTATTAAAATCACCTGGACTGCTCACAGGAAGAGAAGACTTAGAATCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR TCA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATCTTCTCCTTTCTGGTTaGGATTTCCTACCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNLLLSG*DFLPVY
Trigger: ATACACAGGTAGGAAATCTCAACCAGAAAGGAGAAG...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp ATAGATGATACTCCAGTAGATGATCCATCTCTCAAAGTACTAGTGGCCAACAATCTGCTGTTTAATTTCTaGCTCCTCCCACTATTGACA +
Preference number: 4 (lower is better)
Translates to: IDDTPVDDPSLKVLVANNLLFNF*LLPLLT
Trigger: TGTCAATAGTGGGAGGAGTCAGAAATTAAACAGCAG...ATTGTTGGCCACTAGTACTTTGAGAGATGGATCATCTACTGGAGTATCATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TTGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTTACCAGTGGTTTCTCTaGTTTAGAGACACTTATCCT +
Preference number: 4 (lower is better)
Translates to: LLPLFVVAQYTLPCGILAYQWFL*FRDTYP
Trigger: AGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTA...AGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTAGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LTLDLPHLEAQSLQLWCLGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...TAGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: RTTGNNEEVRRCLFTQTCYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAGGTATTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: KVFLKSGHTISICRTLGPVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...TGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAATACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTACCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 4 (lower is better)
Translates to: AAILLMCILTLCTKEERLPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTTTTGGCCAGCCTGTTTaGCTTTGTGAACAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLFGQPV*LCEQGK
Trigger: TTTTCCCTGTTCACAAAGGCAAACAGGCTGGCCAAA...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp CTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAGGAATTCAATAAGGATCAGGTTTTaGACGGAAGTCAAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: LLMCILTLCTKEERLRNSIRIRF*TEVKAL
Trigger: AAGCGCTTTGACTTCCGTCCAAAACCTGATCCTTAT...TGAATTCCTTAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: YSSTICNCKNMEPAQMPIVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CCA 90 bp AAACCAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGAGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: KPRVLFPVGPKTDVSFPRVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...TCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTCTATCTGTAGGACCCTaGGTCCAAAGGTCCTACATA +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFLSVGP*VQRSYI
Trigger: TATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCTCTCTCCAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: ALIKAQLLGDLNRNLSSLQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...GAGAGAGGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCCAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTTGGCAGATTTCTGCGTaGCTATGTTTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SASLQEKSPEMLICSNSAWQISA*LCFGFS
Trigger: TGAGAAACCAAAACATAGCCACGCAGAAATCTGCCA...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp GCTGAACTCTTTTCATTACTAACCAACAATGCAGCACTTGCAACACAATTCCAAGTAAGTCATGTTACCTaGCTGAGCCTCAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: AELFSLLTNNAALATQFQVSHVT*LSLNSL
Trigger: TAAGGAATTGAGGCTCAGCCAGGTAACATGACTTAC...TTGGAATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAATGAAAAGAGTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTGGACTTTTGTATTGTTaGTATGGTTTAAGGCACATT +
Preference number: 4 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFGLLYC*YGLRHI
Trigger: AATGTGCCTTAAACCATACCAACAATACAAAAGTCC...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp ACTGTTATGAGAACAAGCACCATACCCCATCCACCTTGTGTGTTTGGTACGTTTACAAATCAACTAAACTaGAAATGTTTTAGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: TVMRTSTIPHPPCVFGTFTNQLN*KCFRPS
Trigger: ACTCGGCCTAAAACATTTCCAGTTTAGTTGATTTGT...AAACGTACCAAACACACAAGGTGGATGGGGTATGGTGCTTGTTCTCATAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp TCCCAGATAAGTAGGTTCTCCACTGTAAAGAAATATTCTTGTATAGTTGGTTTCCAAACCAGAGCGAGTTaGTCGCCCAGTAAATTGTAC +
Preference number: 4 (lower is better)
Translates to: SQISRFSTVKKYSCIVGFQTRAS*SPSKLY
Trigger: GTACAATTTACTGGGCGACCAACTCGCTCTGGTTTG...GAAACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR CCA 90 bp TTCCTCTTTTTACTTACCAGTGGTTTCTCTGATTTAGAGACACTTATCCTGAGGGGAACTTCTCCTTTCTaGTTGAGATTTCCTACCTGT +
Preference number: 4 (lower is better)
Translates to: FLFLLTSGFSDLETLILRGTSPF*LRFPTC
Trigger: ACAGGTAGGAAATCTCAACCAGAAAGGAGAAGTTCC...CCTCAGGATAAGTGTCTCTAAATCAGAGAAACCACTGGTAAGTAAAAAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp ACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAATTTAGCTGTGTTATTTaGGAAACCTGTTCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: TLSVAQTEPIYQDGNCNEFSCVI*ETCSLR
Trigger: CCTTAAAGAACAGGTTTCCCAAATAACACAGCTAAA...TTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGACAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VRISASLQEKSPEMLICSTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGATGGTGTTTTCTCCTTaGATAGAAACGTGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QESCFLLAQKQMFHFPDKMVFSP*IETCSV
Trigger: AACTGAACACGTTTCTATTCAAGGAGAAAACACCAT...CTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATTCCAGCTGCTTGCTaGCACCCAACTTTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFIPAAC*HPTLKR
Trigger: CCTTTTTAAAGTTGGGTGTCAGCAAGCAGCTGGAAT...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp AGACTAGAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGCATTTGGAGATCAGCCAGGTGGTTTGTATTaGAAAGAGAGTATAAACCCT +
Preference number: 4 (lower is better)
Translates to: RLEFCYYSNQSSRAFGDQPGGLY*KESINP
Trigger: AGGGTTTATACTCTCTTTTCAATACAAACCACCTGG...CTGATCTCCAAATGCTCGGGAAGACTGATTTGAGTAATAACAAAACTCTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: LKPRSPNSLTLANIVRISGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAAGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AGACTAGAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGCATTTGGAGATCAGGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RLEFCYYSNQSSRAFGDQGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...CTGATCTCCAAATGCTCGGGAAGACTGATTTGAGTAATAACAAAACTCTAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGACTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACCTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: EKSPEMLICSNSADVHFNLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GTTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTTTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VNTGFATSRSTITPVMVSLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...AGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTTTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: RTTGNNEEVRRCLFTQTCLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 4 (lower is better)
Translates to: EKSPEMLICSNSADVHFNPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...GTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCCCATTCAATGTGACCTaGCAAACATACACAACTTAC +
Preference number: 4 (lower is better)
Translates to: VRISASLQEKSPEMLICSPFNVT*QTYTTY
Trigger: GTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGG...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTGGTAGAAGTTCGTGTTaGCTGAGTTTAGCCACTAGA +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFGRSSC*LSLATR
Trigger: TCTAGTGGCTAAACTCAGGCAACACGAACTTCTACC...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTGCCATTTGATCCAGCAATCAAATGCTCAGGGAAATaGAATGATCAGGGAAATGCA +
Preference number: 4 (lower is better)
Translates to: VWRFLKELKVELPFDPAIKCSGK*NDQGNA
Trigger: TGCATTTCCCTGATCATTGCATTTCCCTGAGCATTT...GATTGCTGGATCAAATGGCAGTTCTACTTTTAGTTCTTTAAGGAATCTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCAAACTAAAAAGCTTCTaGACAGCCAAAGGAACAATC +
Preference number: 4 (lower is better)
Translates to: YSSTICNCKNMEPAQMPIKLKSF*TAKGTI
Trigger: GATTGTTCCTTTGGCTGTGCAGAAGCTTTTTAGTTT...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp GTGTGGAGATTCCTTAAAGAACTAAAAGTAGAACTGCCATTTGATCCAGCAATCCAACAGGTGAAGTTCTaGATGAGTAATAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VWRFLKELKVELPFDPAIQQVKF*MSNSLG
Trigger: ACCCAAACTATTACTCATGCAGAACTTCACCTGTTG...GATTGCTGGATCAAATGGCAGTTCTACTTTTAGTTCTTTAAGGAATCTCCACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR GCA 90 bp AAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGACTTTTGGCGAAATTATACAAATaGAGAAGCTCTCTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KGVNWPGMKERTANDGLLAKLYK*RSSLSL
Trigger: TAGAGAAAGAGAGCTTCTGCATTTGTATAATTTCGC...CAAAAGTCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR GCA 90 bp TTGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTATTGAAGTAGGGCGTTaGAATATTTTGGAAATCCCA +
Preference number: 4 (lower is better)
Translates to: LLPLFVVAQYTLPCGILAIEVGR*NILEIP
Trigger: TGGGATTTCCAAAATATTGCAACGCCCTACTTCAAT...AGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR GCA 90 bp CTATCCCTTTTTCAAATTCGGGGTGATTCTAAGTCTTCTCTTCCTGTGAGCAGTTCTTGTCTTGACAATTaGCCTTATACTTTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSLFQIRGDSKSSLPVSSSCLDN*PYTFSE
Trigger: CTCTGAAAAAGTATAAGGGCAATTGTCAAGACAAGA...ACTGCTCACAGGAAGAGAAGACTTAGAATCACCCCGAATTTGAAAAAGGGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR CCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: VRISASLQEKSPEMLICSVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MLICSNSADVHFNFMHQGISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCCCAGATAAGTAGGTTCTCCACTGTAAAGAAATATTCTTGTATAGTTGGTTTCATTTCAGGTCGGAGATaGGGAAATGTACAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: SQISRFSTVKKYSCIVGFISGRR*GNVQLP
Trigger: TGGCAACTGTACATTTCCCCATCTCCGACCTGAAAT...GAAACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
CDS-3UTR CCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
CDS-3UTR CCA 90 bp TGCCAAGTTGGAAAAGTTCATACCATTCCATTGTGTAGTTCTTGCCAGTTAATGACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: CQVGKVHTIPLCSSCQLMTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...CATTAACTGGCAAGAACTACACAATGGAATGGTATGAACTTTTCCAACTTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR CCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATTCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp AAACCAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGACAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: KPRVLFPVGPKTDVSFPRQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...TCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATGTGACTACAAAACCCTaGAAAGTTTGGCACATAAAC +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNVTTKP*KVWHIN
Trigger: GTTTATGTGCCAAACTTTCCAGGGTTTTGTAGTCAC...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CACACTATAATTTCTACCCCACACATAGATAGTAATGAGCTTTGCACAGACTCCCAGTTGACCAAAACTTaGTACAAGAATCTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: HTIISTPHIDSNELCTDSQLTKT*YKNLCL
Trigger: GAGACAAAGATTCTTGTACCAAGTTTTGGTCAACTG...GGAGTCTGTGCAAAGCTCATTACTATCTATGTGTGGGGTAGAAATTATAGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp GGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCATATGAGCAGGAAACCACTTaGATAATAAAGGGTAAATAT +
Preference number: 4 (lower is better)
Translates to: GPWVQRSYITDMNHNSPYEQETT*IIKGKY
Trigger: ATATTTACCCTTTATTATCCAAGTGGTTTCCTGCTC...ATATGGAGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp GCTGAACTCTTTTCATTACTAACCAACAATGCAGCACTTGCAACACAATTCCAAAAACACTACTCTGCATaGTTACAACTCTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: AELFSLLTNNAALATQFQKHYSA*LQLSSW
Trigger: CCAAGATGAGAGTTGTAACCATGCAGAGTAGTGTTT...TTGGAATTGTGTTGCAAGTGCTGCATTGTTGGTTAGTAATGAAAAGAGTTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp TTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGGGAATTGCAATGAAGAATATAAGGTGCCTCTTTaGGGTAGAATTCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: LSVAQTEPIYQDGNCNEEYKVPL*GRILIV
Trigger: TACTATAAGAATTCTACCCCAAAGAGGCACCTTATA...TTCTTCATTGCAATTCCCATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAATGTCCAGAGCTAAATTaGGGAAATGGGGAAAGACGT +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVECPELN*GNGERR
Trigger: ACGTCTTTCCCCATTTCCCCAATTTAGCTCTGGACA...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636767.2
CDS-3UTR CCA 90 bp GAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGCATTTGGAGATCAGAATTTTTGTCCAGAGCTAAATTaGGGAAATGGGGAAAGACGT +
Preference number: 4 (lower is better)
Translates to: EFCYYSNQSSRAFGDQNFCPELN*GNGERR
Trigger: ACGTCTTTCCCCATTTCCCCAATTTAGCTCTGGACA...AAAATTCTGATCTCCAAATGCTCGGGAAGACTGATTTGAGTAATAACAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp TTGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTACCCTGTGGAATACTTGCTTGTTACCTTTGTTTGTaGTTGCTCAGTACACTTTAC +
Preference number: 4 (lower is better)
Translates to: LLPLFVVAQYTLPCGILACYLCL*LLSTLY
Trigger: GTAAAGTGTACTGAGCAACCACAAACAAAGGTAACA...AGCAAGTATTCCACAGGGTAAAGTGTACTGAGCAACCACAAACAAAGGTAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp CATATGGACAAGCTCCTTACTTCTCAAATGCTATGGTATATTGTCTCCATTTTGCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: HMDKLLTSQMLWYIVSILQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...CAAAATGGAGACAATATACCATAGCATTTGAGAAGTAAGGAGCTTGTCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACACAAGAGAAGAGTCCTaGGATGTTAATATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNTREES*DVNMQQ
Trigger: TTGCTGCATATTAACATCTCAGGACTCTTCTCTTGT...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TCCCAGATAAGTAGGTTCTCCACTGTAAAGAAATATTCTTGTATAGTTGGTTTCCAAAGGCTCGGAAATTaGAACCAAGATCACCTAACT +
Preference number: 4 (lower is better)
Translates to: SQISRFSTVKKYSCIVGFQRLGN*NQDHLT
Trigger: AGTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTG...GAAACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR TCA 90 bp TGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATATCAAACTACAGGAAACAATaGAGAAGTCAGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CFTGFQLILVIWAVVTISNYRKQ*RSQKVP
Trigger: AGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTT...TGATATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCACTTTTACTCCGAAAGTaGAGTAAGAGCTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: LKPRSPNSLTLANIVRISLLLRK*SKSLSL
Trigger: TAAGGATAAGCTCTTACTTCACTTTCGGAGTAAAAG...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR TCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATACTTTGCCATTTGGTTaGACATGTTTCCTGCATTTC +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNTLPFG*TCFLHF
Trigger: GAAATGCAGGAAACATGTTCAACCAAATGGCAAAGT...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616833.6
CDS-3UTR GCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACGGGGAAATGTACAGTTaGCAAGTTGGAAAAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNGEMYS*QVGKVH
Trigger: ATGAACTTTTCCAACTTGGCAACTGTACATTTCCCC...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACCTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GAACTGTTTGTGCACAATCACTGCATCAAAAATTTGCAAGAGACTCAACAGAAACTGTTTCACCCACTTTaGCATTTGGTTGAACATGTT +
Preference number: 4 (lower is better)
Translates to: ELFVHNHCIKNLQETQQKLFHPL*HLVEHV
Trigger: AACATGTTCAACCAAATGGCAAAGTGGGTGAAACAG...TTTCTGTTGAGTCTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAACAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: SASLQEKSPEMLICSNSAYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: VRISASLQEKSPEMLICSYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGTAGGTTCTTAGTGATGTTAGTATaGTTAAAGAACACAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LVSCWPKNRCFISQISRFLVMLV*LKNTSQ
Trigger: CTGGCTTGTGTTCTTTAAGCATACTAACATCACTAA...GAACCTACTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CATATGGACAAGCTCCTTACTTCTCAAATGCTATGGTATATTGTCTCCATTTTGCAGAAAACACTACTCTaGATGGTTACAACTCTCATC +
Preference number: 4 (lower is better)
Translates to: HMDKLLTSQMLWYIVSILQKTLL*MVTTLI
Trigger: GATGAGAGTTGTAACCATGCAGAGTAGTGTTTTCTG...CAAAATGGAGACAATATACCATAGCATTTGAGAAGTAAGGAGCTTGTCCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GAACAGAATAAAGCCTGTTGTATTAGAACTGGGGATACTGTTCTTAGCATTCTTGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: EQNKACCIRTGDTVLSILVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...AAGAATGCTAAGAACAGTATCCCCAGTTCTAATACAACAGGCTTTATTCTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTTTACAACAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: SPNSLTLANIVRISASLQQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...TTGTAAAGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: SASLQEKSPEMLICSNSAFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GTACGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCCAGTTGACCAAAACTTaGTACAAGAATCTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VRISASLQEKSPEMLICSQLTKT*YKNLCL
Trigger: GAGACAAAGATTCTTGTACCAAGTTTTGGTCAACTG...GCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTTGGCAGATTTCTGCGTaGCTATGTTTTGGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFWQISA*LCFGFS
Trigger: TGAGAAACCAAAACATAGCCACGCAGAAATCTGCCA...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CCA 90 bp CTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAGGAATTCACTCCTCCGTATACTATaGCCAAATTCAAAATTACCA +
Preference number: 4 (lower is better)
Translates to: LLMCILTLCTKEERLRNSLLRIL*PNSKLP
Trigger: TGGTAATTTTGAATTTGGCCATAGTATACGGAGGAG...TGAATTCCTTAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp GAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGCATTTGGAGATCAGAATTTTAAAGTCTGTGCTTCCTaGCTTCATAGTGTACAAGGT +
Preference number: 4 (lower is better)
Translates to: EFCYYSNQSSRAFGDQNFKVCAS*LHSVQG
Trigger: ACCTTGTACACTATGAAGCCAGGAAGCACAGACTTT...AAAATTCTGATCTCCAAATGCTCGGGAAGACTGATTTGAGTAATAACAAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CCA 90 bp GAGTTTTGTTATTACTCAAATCAGTCTTCCCGAGCATTTGGAGATCAGAATTTTGAGAGATTCTCATCCTaGGTTCCAGAATTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EFCYYSNQSSRAFGDQNFERFSS*VPEFLF
Trigger: AAAGAGGAATTCTGGAACCCAGGATGAGAATCTCTC...AAAATTCTGATCTCCAAATGCTCGGGAAGACTGATTTGAGTAATAACAAAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp GGTCGGTTAGGTCTGATTTCTTTCACGGTCATAATTTaGCAAAGTTGGTTTCATAATGACTTTTGGACTAGT +
Preference number: 4 (lower is better)
Translates to: GRLGLISFTVII*QSWFHNDFWTS
Trigger: ACTAGTCCAAAAGTCATTATGAAACCAACTTTGCAAAATTATGACCGTGAAAGAAATCAGACCTAACCGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGACAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: MLICSNSADVHFNFMHQGQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTCAGTTAATGTACTTCTaGATCCAATGGCATCATGCA +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFQLMYF*IQWHHA
Trigger: TGCATGATGCCATTGGATTCAGAAGTACATTAACTG...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GAACAGAATAAAGCCTGTTGTATTAGAACTGGGGATACTGTTCTTAGCATTCTTGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: EQNKACCIRTGDTVLSILDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...AAGAATGCTAAGAACAGTATCCCCAGTTCTAATACAACAGGCTTTATTCTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR TCA 90 bp TGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATATCAAGCTTAAAATCTAGGTaGCTACAAAACCCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CFTGFQLILVIWAVVTISSLKSR*LQNPGK
Trigger: CTTTCCAGGGTTTTGTAGTCACCTAGATTTTAAGCT...TGATATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GTTTATAAAAGCTTCCTGTCAGTATCTGTACTTATTTCCTCACAGACCAGTAACTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: VYKSFLSVSVLISSQTSNYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...GTTACTGGTCTGTGAGGAAATAAGTACAGATACTGACAGGAAGCTTTTATAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SASLQEKSPEMLICSNSAFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...AGCAGAATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCAGCCAGAAATTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CLKNTSQLLASSKISARNFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...ATTTCTGGCTGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp CGAATTTCAGCTTCTTTACAAGAGAAGAGTCCTGAGATGTTAATATGCAGCAATGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RISASLQEKSPEMLICSNVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...ATTGCTGCATATTAACATCTCAGGACTCTTCTCTTGTAAAGAAGCTGAAATTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAATGGACTTATTTCAACTaGTCGACCAAGCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVEWTYFN*STKLYG
Trigger: TCCATAAAGCTTGGTCGAGCAGTTGAAATAAGTCCA...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636525.2
CDS-3UTR CCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAAGTACAGTTGCCAAGTTaGAAAAGTTCATACCATTCC +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVEVQLPS*KSSYHS
Trigger: GGAATGGTATGAACTTTTCCAACTTGGCAACTGTAC...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CCA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAACCCACTTTGCCATTTaGTTGAACATGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: MLICSNSADVHFNFMHQGTHFAI*LNMFPD
Trigger: ATCAGGAAACATGTTCAACCAAATGGCAAAGTGGGT...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
CDS-3UTR CCA 90 bp TTGAAAGCTTGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: LKACLALIKAQLLGDLNRSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACAAGCTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTGAAACCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: LKPRSPNSLTLANIVRISSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGGTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TCCCAGATAAGTAGGTTCTCCACTGTAAAGAAATATTCTTGTATAGTTGGTTTCAGTCTTGTTTCCTGTTaGCCCAAAAACAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: SQISRFSTVKKYSCIVGFSLVSC*PKNRCF
Trigger: GAAACATCTGTTTTTGGGCCAACAGGAAACAAGACT...GAAACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTGGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR CCA 90 bp ATCATTATCACTGCCATTCAATGTGACCTGCCAAACATACACAACTTACATCTTTTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: IIITAIQCDLPNIHNLHLFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...AAGATGTAAGTTGTGTATGTTTGGCAGGTCACATTGAATGGCAGTGATAATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp CATTGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATAAGGTCAAGAAAACAATaGCATCAATTACCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: HCFTGFQLILVIWAVVTIRSRKQ*HQLPGF
Trigger: AAAGCCGGGTAATTGATGCCATTGTTTTCTTGACCT...TATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CCA 90 bp GATTCCTTTAGATCAAATCCTGTCCAACAGATATATAACGTGTGTGTGTGTATGGTCTTCCCGAGCATTTaGAGATCAGAATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: DSFRSNPVQQIYNVCVCMVFPSI*RSEFLK
Trigger: CTTTAAAAATTCTGATCTCCAAATGCTCGGGAAGAC...CATACACACACACACGTTATATATCTGTTGGACAGGATTTGATCTAAAGGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR TCA 90 bp TCCCAGATAAGTAGGTTCTCCACTGTAAAGAAATATTCTTGTATAGTTGGTTTCGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SQISRFSTVKKYSCIVGFDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...GAAACCAACTATACAAGAATATTTCTTTACAGTGGAGAACCTACTTATCTGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR TCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAAGATATAGTTGCTACTTaGACTAATGTCCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVEDIVAT*TNVPFS
Trigger: GGAAAATGGGACATTAGTTCAAGTAGCAACTATATC...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR TCA 90 bp CATTGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATACTTTTACTCCGAAAGTaGAGTAAGAGCTTATCCTTA +
Preference number: 4 (lower is better)
Translates to: HCFTGFQLILVIWAVVTILLLRK*SKSLSL
Trigger: TAAGGATAAGCTCTTACTTCACTTTCGGAGTAAAAG...TATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTTATGTTCTTGAACTCTaGTCCAAATTCAGCCAACTT +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFYVLEL*SKFSQL
Trigger: AAGTTGGCTGAATTTGGAGCAGAGTTCAAGAACATA...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAGTGAAAAAGTGTAACTaGCATATCAGAAAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MLICSNSADVHFNFMHQGVKKCN*HIRKKS
Trigger: GCTCTTCTTTCTGATATGGCAGTTACACTTTTTCAC...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp TGTTTTACTGGCTTTCAACTTATCTTGGTAATTTGGGCTGTTGTAACCATATCACACATTAAGTCATATTaGTCAAAGGGCAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: CFTGFQLILVIWAVVTISHIKSY*SKGSKT
Trigger: AGTTTTGCTGCCCTTTGAGCAATATGACTTAATGTG...TGATATGGTTACAACAGCCCAAATTACCAAGATAAGTTGAAAGCCAGTAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR GCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAAATTGAAGTAGGGCGTTaGAATATTTTGGAAATCCCA +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVEIEVGR*NILEIP
Trigger: TGGGATTTCCAAAATATTGCAACGCCCTACTTCAAT...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CCA 90 bp GAACTGTTTGTGCACAATCACTGCATCAAAAATTTGCAAGAGACTCAACAGAAATCCTTAACACAAATTTaGAACAGTCGTAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: ELFVHNHCIKNLQETQQKSLTQI*NSRRNQ
Trigger: TTGATTCCTACGACTGTTCCAAATTTGTGTTAAGGA...TTTCTGTTGAGTCTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAACAGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR CCA 90 bp TTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGACAATCACTCCAGTTATaGTGTCTAAACGAATGTCTA +
Preference number: 4 (lower is better)
Translates to: LICSNSADVHFNFMHQGRQSLQL*CLNECL
Trigger: TAGACATTCGTTTAGACACCATAACTGGAGTGATTG...TCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp ATGTTAGTATGCTTAAAGAACACAAGCCAGTTACTAGCTAGTTCCAAAATCTCATTCATTACTACTAGCTaGATAGCCAGAGAAAGATCA +
Preference number: 4 (lower is better)
Translates to: MLVCLKNTSQLLASSKISFITTS*IARERS
Trigger: TGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAA...TGAGATTTTGGAACTAGCTAGTAACTGGCTTGTGTTCTTTAAGCATACTAACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAAACAGAAAGATCATTGTaGTACTCCGACTTAATGTGT +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVETERSL*YSDLMC
Trigger: ACACATTAAGTCGGAGTACCACAATGATCTTTCTGT...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CCA 90 bp GATTCCTTTAGATCAAATCCTGTCCAACAGATATATAACGTGTGTGTGTGTATGTTTCATAATGACTTTTaGACTAGTTCTTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: DSFRSNPVQQIYNVCVCMFHNDF*TSSSGR
Trigger: CCTTCCTGAAGAACTAGTCCAAAAGTCATTATGAAA...CATACACACACACACGTTATATATCTGTTGGACAGGATTTGATCTAAAGGAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp CTTTTACTTGGGTCCTATGGAACTACAGATTTTTGTTaGTTACCTTTGTTTGTGGTTGCTCAGTACACTTTA +
Preference number: 4 (lower is better)
Translates to: LLLGSYGTTDFC*LPLFVVAQYTL
Trigger: TAAAGTGTACTGAGCAACCACAAACAAAGGTAACAAACAAAAATCTGTAGTTCCATAGGACCCAAGTAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637397.2
3UTR CAA 72 bp ATAGAACTGTTTGTGCACAATCACTGCATCAAAAATTaGCAAGAGACTCAACAGAAATTCTTTAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IELFVHNHCIKN*QETQQKFFSWQ
Trigger: TTGCCAACTAAAGAATTTCTGTTGAGTCTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAACAGTTCTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR GCA 90 bp AAGAGTCCTGAGATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTTTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KSPEMLICSNSADVHFNFFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...AAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACATCTCAGGACTCTT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR GCA 90 bp ATGTTAATATGCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGATTTGTGCACAATCACTaGATCAAAAATTTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: MLICSNSADVHFNFMHQGFVHNH*IKNLQE
Trigger: CTCTTGCAAATTTTTGATGCAGTGATTGTGCACAAA...TCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGCATATTAACAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CCA 90 bp GGAGGGAATATAACTAAATTGAATATATTAACCCAAGTGGTCGTTTCAGTGGAATATAAGGTGCCTCTTTaGGGTAGAATTCTTATAGTA +
Preference number: 4 (lower is better)
Translates to: GGNITKLNILTQVVVSVEYKVPL*GRILIV
Trigger: TACTATAAGAATTCTACCCCAAAGAGGCACCTTATA...TTCCACTGAAACGACCACTTGGGTTAATATATTCAATTTAGTTATATTCCCTCC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS CCA 90 bp GCTGCACCCAGTACTTCCGGAGCCTCTCGAGGCCTGCGACGCCGGTaGGAGGAGCATGCGCGGAGCCGCCAGTCCGGGACGCGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: AAPSTSGASRGLRRR*EEHARSRQSGTRGA
Trigger: GGCGCCCCGCGTCCCGGACTGGCGGCTCCGCGCATGCTCCTCCCACCGGCGTCGCAGGCCTCGAGAGGCTCCGGAAGTACTGGGTGCAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS TCA 90 bp GCGCGTCAGCTCCAGAGCTTGGCCCCAAGCGCAGGTTCCGGCGCATaGCACCTCCCCGCGCCCGGCCCGCGGCGGCTTCCACACTTTGCA +
Preference number: 5 (lower is better)
Translates to: ARQLQSLAPSAGSGA*HLPAPGPRRLPHFA
Trigger: TGCAAAGTGTGGAAGCCGCCGCGGGCCGGGCGCGGGGAGGTGTCATGCGCCGGAACCTGCGCTTGGGGCCAAGCTCTGGAGCTGACGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS GCA 90 bp CCCGCGCCCCGCCGCATCTCGGCGCCCTGTGCCGTGTCTACCTCCTaGGCCATCAGGCTGCACCCAGTACTTCCGGAGCCTCTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: PAPRRISAPCAVSTS*AIRLHPVLPEPLEA
Trigger: GGCCTCGAGAGGCTCCGGAAGTACTGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATGCGGCGGGGCGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000485938.4
ENST00000636183.2
ENST00000636780.2
CDS GCA 90 bp TGCGCCATCAGGCTGCACCCAGTACTTCCGGAGCCTCTCGAGGCCTaGGACGCCGGTGGGAGGAGCATGCGCGGAGCCGCCAGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: CAIRLHPVLPEPLEA*DAGGRSMRGAASPG
Trigger: TCCCGGACTGGCGGCTCCGCGCATGCTCCTCCCACCGGCGTCGCAGGCCTCGAGAGGCTCCGGAAGTACTGGGTGCAGCCTGATGGCGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS GCA 90 bp AGTCAAAGCGCTTGTAGGGCACCGGCCAGTGGCGCCGGGAGGGGATaGCCGAGACCCGGGACCAGCCCGGAACCACCGCGAGCCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SQSACRAPASGAGRG*PRPGTSPEPPRAKA
Trigger: TGCTTTGGCTCGCGGTGGTTCCGGGCTGGTCCCGGGTCTCGGGCATCCCCTCCCGGCGCCACTGGCCGGTGCCCTACAAGCGCTTTGACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000377453.9
ENST00000485938.4
ENST00000616833.6
ENST00000635905.1
ENST00000635915.1
ENST00000635989.1
ENST00000636183.2
ENST00000636525.2
ENST00000636767.2
ENST00000636780.2
ENST00000637397.2
ENST00000637537.2
CDS GCA 90 bp GCATCTCGGCGCCCTGTGCCGTGTCTACCTCCTGCGCCATCAGGCTaGACCCAGTACTTCCGGAGCCTCTCGAGGCCTGCGACGCCGGTG +
Preference number: 5 (lower is better)
Translates to: ASRRPVPCLPPAPSG*TQYFRSLSRPATPV
Trigger: CACCGGCGTCGCAGGCCTCGAGAGGCTCCGGAAGTACTGGGTGCAGCCTGATGGCGCAGGAGGTAGACACGGCACAGGGCGCCGAGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636183.2
ENST00000636780.2
CDS GCA 90 bp CGCGCCCGGCCCGCGGCGGCTTCCACACTTTGCAGTCCAGGAAGGTaGTTTGGTCTGGCTCCCAGGAGAATTCGATCCAGACCTGGGGCG +
Preference number: 5 (lower is better)
Translates to: RARPAAASTLCSPGR*FGLAPRRIRSRPGA
Trigger: CGCCCCAGGTCTGGATCGAATTCTCCTGGGAGCCAGACCAAAGCACCTTCCTGGACTGCAAAGTGTGGAAGCCGCCGCGGGCCGGGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS GCA 90 bp AGGGCTGCACGTAACGAGCGGCTGCGACTCCCCAGTCCTCAACTTTaGTCTCAAGTGCGCTCCGAGCGTCACCCGGCGCTGTCCCCGCAC +
Preference number: 5 (lower is better)
Translates to: RAARNERLRLPSPQL*SQVRSERHPALSPH
Trigger: GTGCGGGGACAGCGCCGGGTGACGCTCGGAGCGCACTTGAGAGCAAAGTTGAGGACTGGGGAGTCGCAGCCGCTCGTTACGTGCAGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636405.1
CDS GCA 90 bp CGCATGACACCTCCCCGCGCCCGGCCCGCGGCGGCTTCCACACTTTaGAGTCCAGGAAGGTGCTTTGGTCTGGCTCCCAGGAGAATTCGA +
Preference number: 5 (lower is better)
Translates to: RMTPPRARPAAASTL*SPGRCFGLAPRRIR
Trigger: TCGAATTCTCCTGGGAGCCAGACCAAAGCACCTTCCTGGACTGCAAAGTGTGGAAGCCGCCGCGGGCCGGGCGCGGGGAGGTGTCATGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS CCA 90 bp CCGGCCCGCGGCGGCTTCCACACTTTGCAGTCCAGGAAGGTGCTTTaGTCTGGCTCCCAGGAGAATTCGATCCAGACCTGGGGCGTCATC +
Preference number: 5 (lower is better)
Translates to: PARGGFHTLQSRKVL*SGSQENSIQTWGVI
Trigger: GATGACGCCCCAGGTCTGGATCGAATTCTCCTGGGAGCCAGACCAAAGCACCTTCCTGGACTGCAAAGTGTGGAAGCCGCCGCGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS GCA 90 bp AGGCTGTGTCTTCTCTGTCAAAGGCTGGAATCGACCTCCCAGGTGTaGGGGCTCTGTCCCCGACTTAGGACCGGCGTCCTACCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RLCLLCQRLESTSQV*GLCPRLRTGVLPPG
Trigger: GCCTGGAGGTAGGACGCCGGTCCTAAGTCGGGGACAGAGCCCGCACACCTGGGAGGTCGATTCCAGCCTTTGACAGAGAAGACACAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636405.1
CDS TCA 90 bp TGCGGGCTCTGTCCCCGACTTAGGACCGGCGTCCTACCTCCAGGCTaGAGACTGGACAAAAGCGGTGACAATCTTCCCGGTCTAACCAGG +
Preference number: 5 (lower is better)
Translates to: CGLCPRLRTGVLPPG*RLDKSGDNLPGLTR
Trigger: CCTGGTTAGACCGGGAAGATTGTCACCGCTTTTGTCCAGTCTTCAGCCTGGAGGTAGGACGCCGGTCCTAAGTCGGGGACAGAGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636405.1
CDS CCA 90 bp CCGCGGCGGCTTCCACACTTTGCAGTCCAGGAAGGTGCTTTGGTCTaGCTCCCAGGAGAATTCGATCCAGACCTGGGGCGTCATCTTTTA +
Preference number: 5 (lower is better)
Translates to: PRRLPHFAVQEGALV*LPGEFDPDLGRHLL
Trigger: TAAAAGATGACGCCCCAGGTCTGGATCGAATTCTCCTGGGAGCCAGACCAAAGCACCTTCCTGGACTGCAAAGTGTGGAAGCCGCCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CAA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGCTTGCTGCTCCAGGTTaGGGGGTTTTGCGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRLAAPG*GVLRRF
Trigger: GAACCTCCGCAAAACCCCCAAACCTGGAGCAGCAAG...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS CCA 90 bp GTAAGACAAGCCTGGCACATTTGGTCTCCGGTAGGTACGGAAGACTaGATTTCAGGCCTCGACGCAGGAATGGAGACGGAAGAGACTGGC +
Preference number: 5 (lower is better)
Translates to: VRQAWHIWSPVGTED*ISGLDAGMETEETG
Trigger: GCCAGTCTCTTCCGTCTCCATTCCTGCGTCGAGGCCTGAAATCCAGTCTTCCGTACCTACCGGAGACCAAATGTGCCAGGCTTGTCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636405.1
ENST00000636520.1
CDS-3UTR CAA 90 bp TCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: SAAMFLHTPVRRTAEALCKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...GCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS GCA 90 bp GACTACAACAGAGTATGGAAATCAAGAGGTGTTACCTGCCTGCCCTaGCACTTCTGGGCCTCTTCTCACCTTCCAGGAGCTAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: DYNRVWKSRGVTCLP*HFWASSHLPGARYR
Trigger: CCTGTACCTAGCTCCTGGAAGGTGAGAAGAGGCCCAGAAGTGGCAGGGCAGGCAGGTAACACCTCTTGATTTCCATACTCTGTTGTAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636520.1
ENST00000637278.1
CDS-3UTR CAA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636767.2
ENST00000637397.2
CDS-3UTR CAA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTA +
Preference number: 5 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTATALTA*WEEGEL
Trigger: TAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGT...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTATCAGCACCAGTAACATCTGGTaGGCAGGCACTGGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PCSCIPRLEEPLKHYAISTSNIW*AGTGLR
Trigger: CCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGT...GCTGATAGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGCTTTTGAGGAGCCTCTaGTGGCATGCTTTGCTGTTA +
Preference number: 5 (lower is better)
Translates to: PVLSRRSATSSTALTALWLLRSL*WHALLL
Trigger: TAACAGCAAAGCATGCCACAAGAGGCTCCTCAAAAG...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CAA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGCAGGTGTTCCTTGCTaGGATCTGTCACTTCACTGG +
Preference number: 5 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTAAGVPC*DLSLHW
Trigger: CCAGTGAAGTGACAGATCCAAGCAAGGAACACCTGC...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS CCA 90 bp AGGAAGGTGCTTTGGTCTGGCTCCCAGGAGAATTCGATCCAGACCTaGGGCGTCATCTTTTATGAATTGACCTGTCCTTGCCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: RKVLWSGSQENSIQT*GVIFYELTCPCPKA
Trigger: GGCTTTTGGGCAAGGACAGGTCAATTCATAAAAGATGACGCCCCAGGTCTGGATCGAATTCTCCTGGGAGCCAGACCAAAGCACCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS CCA 90 bp AGGACTCGAGGGGCACTGCAGCTGAATTCAGCTCAACAGACACACTaGTCACCTATAATCTGGCACTGGGAAAGAAAGAAGTGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: RTRGALQLNSAQQTH*SPIIWHWERKKWWR
Trigger: TCGCCACCACTTCTTTCTTTCCCAGTGCCAGATTATAGGTGACCAGTGTGTCTGTTGAGCTGAATTCAGCTGCAGTGCCCCTCGAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636405.1
CDS-3UTR CAA 90 bp AGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTAGGAATAGGCTGGAGAATCGCTaGAACCCAAGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RYWRDVGEREHFFSAARNRLENR*NPRGGG
Trigger: ACCTCCACCTCTTGGGTTCAAGCGATTCTCCAGCCT...ATTCCTAGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CAA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATATACCAGACAGCAGTTTaGCAGGGCCTTAGACCGGGA +
Preference number: 5 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIYQTAV*QGLRPG
Trigger: TCCCGGTCTAAGGCCCTGCAAAACTGCTGTCTGGTA...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CAA 90 bp CCAAGATCACCTAACTCGCTCACTTTGGCCAATATAGTACGAATTTCAGCTTCTCGTCAGCTCCAGAGCTaGGCCCCAAGCGCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: PRSPNSLTLANIVRISASRQLQS*APSAGS
Trigger: GGAACCTGCGCTTGGGGCCAAGCTCTGGAGCTGACG...AGAAGCTGAAATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGGTGATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS GCA 90 bp AAAGTGACTACAACAGAGTATGGAAATCAAGAGGTGTTACCTGCCTaGCCTGCCACTTCTGGGCCTCTTCTCACCTTCCAGGAGCTAGGT +
Preference number: 5 (lower is better)
Translates to: KVTTTEYGNQEVLPA*PATSGPLLTFQELG
Trigger: ACCTAGCTCCTGGAAGGTGAGAAGAGGCCCAGAAGTGGCAGGGCAGGCAGGTAACACCTCTTGATTTCCATACTCTGTTGTAGTCACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636520.1
ENST00000637278.1
CDS GCA 90 bp TGGAAAAGTGACTACAACAGAGTATGGAAATCAAGAGGTGTTACCTaGCTGCCCTGCCACTTCTGGGCCTCTTCTCACCTTCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: WKSDYNRVWKSRGVT*LPCHFWASSHLPGA
Trigger: AGCTCCTGGAAGGTGAGAAGAGGCCCAGAAGTGGCAGGGCAGGCAGGTAACACCTCTTGATTTCCATACTCTGTTGTAGTCACTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636520.1
ENST00000637278.1
CDS-3UTR CAA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGGAGTCTTGTTTCCTGTaGGCCCAAAAACAGATGTTT +
Preference number: 5 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGESCFL*AQKQMF
Trigger: AAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGACAAAGGCTCGGAAATaGAAACCAAGATCACCTAAC +
Preference number: 5 (lower is better)
Translates to: PVLSRRSATSSTALTALWTKARK*KPRSPN
Trigger: GTTAGGTGATCTTGGTTTCAATTTCCGAGCCTTTGT...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp TTGTGGGAAGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTCGGGGTTTCACCACATaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LWEEGELQETMKKSEGACRGFTT*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAATGTGGTGAAACCCCG...ACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCTTCCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CAA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCTATAATTGGAGTACTTaGGGAAGCCGAGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGYNWST*GSRGRR
Trigger: CCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATA...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636767.2
ENST00000637397.2
CDS-3UTR CAA 90 bp GTTAACACTGGATTTGCCACATCTAGAAGCACAATCACTCCAGTTATGGTGTCTCCAGGTTTGGGGGTTTaGCGGAGGTTCAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VNTGFATSRSTITPVMVSPGLGV*RRFRLG
Trigger: GCCCAGCCTGAACCTCCGCAAAACCCCCAAACCTGG...AGACACCATAACTGGAGTGATTGTGCTTCTAGATGTGGCAAATCCAGTGTTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CAA 90 bp CAGCCAGCCCAGGCTTCAGAATTCAGCTCAGATGTGATCTTTGTTGACCTGCCTATTGCCAGGAGCAATTaGGGGAGGTTCAGACTCTTG +
Preference number: 5 (lower is better)
Translates to: QPAQASEFSSDVIFVDLPIARSN*GRFRLL
Trigger: CAAGAGTCTGAACCTCCCCAAATTGCTCCTGGCAAT...AGGCAGGTCAACAAAGATCACATCTGAGCTGAATTCTGAAGCCTGGGCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS CCA 90 bp TCACATGGTGATGGGTTAACCTGGAAAAGTGACTACAACAGAGTATaGAAATCAAGAGGTGTTACCTGCCTGCCCTGCCACTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SHGDGLTWKSDYNRV*KSRGVTCLPCHFWA
Trigger: GGCCCAGAAGTGGCAGGGCAGGCAGGTAACACCTCTTGATTTCCATACTCTGTTGTAGTCACTTTTCCAGGTTAACCCATCACCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636520.1
ENST00000637278.1
CDS-3UTR CAA 90 bp GGGACACATAGATACTCATTTTGGGGCTTCCAGAGCAGGTTGGTGAAGTTAGAAAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: GTHRYSFWGFQSRLVKLEKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...TTCTAACTTCACCAACCTGCTCTGGAAGCCCCAAAATGAGTATCTATGTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000636525.2
ENST00000636767.2
CDS-3UTR CAA 90 bp ATGGGGAAAGGTGTGAACTGGCCTGGAATGAAAGAAAGAACCGCTAATGATGGAAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: MGKGVNWPGMKERTANDGKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...TCCATCATTAGCGGTTCTTTCTTTCATTCCAGGCCAGTTCACACCTTTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CAA 90 bp AGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGGAGTCTTGTTTCCTGTaGGCCCAAAAACAGATGTTT +
Preference number: 5 (lower is better)
Translates to: RRCLFTQTCLQPCSCIPRESCFL*AQKQMF
Trigger: AAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC...CCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGAAACCAGAGAGTGTTTaGTTTCTGATAGGTAAAGGG +
Preference number: 5 (lower is better)
Translates to: PVLSRRSATSSTALTALWKPESV*FLIGKG
Trigger: CCCTTTACCTATCAGAAACAAAACACTCTCTGGTTT...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp AATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTA +
Preference number: 5 (lower is better)
Translates to: NEEVRRCLFTQTCLQPCSTALTA*WEEGEL
Trigger: TAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGT...GGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CCTGTCCTCTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGACCAAGTTCTTTGATTaGCAGTTGACCAAAACTTGG +
Preference number: 5 (lower is better)
Translates to: PVLSRRSATSSTALTALWTKFFD*QLTKTW
Trigger: CCAAGTTTTGGTCAACTGCAAATCAAAGAACTTGGT...CCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAGAGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CAA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTGCTGAGATTGTGTCATaGCACTCCAGCCTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: KNRYWRDVGEREHFFSAAAEIVS*HSSLSD
Trigger: GTCGCTCAGGCTGGAGTGCAATGACACAATCTCAGC...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CAA 90 bp CCGCCCAATGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATCAAGAAGGTAGTGTTTaGGTTGGGTGTGGTAGCTCA +
Preference number: 5 (lower is better)
Translates to: PPNGFTLSVAQTEPIYQDQEGSV*VGCGSS
Trigger: TGAGCTACCACACCCAACCAAAACACTACCTTCTTG...ATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CAA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGACCTCCACCTGTCTCTaGCTGGTCACTCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKTSTCL*LVTHVE
Trigger: CTCCACGTGAGTGACCAGCAAGAGACAGGTGGAGGT...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CAA 90 bp CACAGCTATAATTGGAGTACTTTGGGAAGCCGAGGCAGGAGGTTCTGTTGTGGCGTGTACAAGGTCCTTTaGTATCTTGACCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: HSYNWSTLGSRGRRFCCGVYKVL*YLDLHL
Trigger: CAGGTGGAGGTCAAGATACAAAAGGACCTTGTACAC...GCCACAACAGAACCTCCTGCCTCGGCTTCCCAAAGTACTCCAATTATAGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS CCA 90 bp AAGGCAGAGGAAATGTTAAGTATTGTAAGACAAGCCTGGCACATTTaGTCTCCGGTAGGTACGGAAGACTGGATTTCAGGCCTCGACGCA +
Preference number: 5 (lower is better)
Translates to: KAEEMLSIVRQAWHI*SPVGTEDWISGLDA
Trigger: TGCGTCGAGGCCTGAAATCCAGTCTTCCGTACCTACCGGAGACCAAATGTGCCAGGCTTGTCTTACAATACTTAACATTTCCTCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636405.1
ENST00000636520.1
CDS-3UTR CAA 90 bp TTTTTAAAATCTGGGCACACCATATCTATCTGTAGGACCCTGGGTCCAAAGGTCAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: FLKSGHTISICRTLGPKVKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...GACCTTTGGACCCAGGGTCCTACAGATAGATATGGTGTGCCCAGATTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CAA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTCCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 5 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp TCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCCCTAACTCGCTCACTTaGGCCAATATAGTACGAATT +
Preference number: 5 (lower is better)
Translates to: SAAMFLHTPVRRTAEALCPNSLT*ANIVRI
Trigger: AATTCGTACTATATTGGCCAAAGTGAGCGAGTTAGG...GCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CTCTCGGAGAAGTGCAACCTCTTCCACTGCGCTGACAGCTTTGTGGGAAGAGGGAATGGTGTTTTCTCCTaGAATAGAAACGTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LSEKCNLFHCADSFVGRGNGVFS*NRNVFS
Trigger: ACTGAACACGTTTCTATTCAAGGAGAAAACACCATT...CCCTCTTCCCACAAAGCTGTCAGCGCAGTGGAAGAGGTTGCACTTCTCCGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp TGTCTGGCTCTAATTAAAGCACAGCTACTTGGTGATCTTAACAGAAACCTGTCCCGGGGTTTCACCACATaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CLALIKAQLLGDLNRNLSRGFTT*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAATGTGGTGAAACCCCG...GGACAGGTTTCTGTTAAGATCACCAAGTAGCTGTGCTTTAATTAGAGCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CAA 90 bp GAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTTGGAACATCACTCTTaGTATAGCCTGCCAACTATT +
Preference number: 5 (lower is better)
Translates to: EGACLPKRVCSHVPAYPGLEHHS*YSLPTI
Trigger: AATAGTTGGCAGGCTATACAAAGAGTGATGTTCCAA...ACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CAA 90 bp AAAAATAGATATTGGCGGGATGTGGGGGAAAGGGAACACTTCTTCTCTGCTGCTTGCAGCAAGCTGAGATaGTGTCATTGCACTCCAGCC +
Preference number: 5 (lower is better)
Translates to: KNRYWRDVGEREHFFSAACSKLR*CHCTPA
Trigger: GGCTGGAGTGCAATGACACAATCTCAGCTTGCTGCA...AGCAGCAGAGAAGAAGTGTTCCCTTTCCCCCACATCCCGCCAATATCTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CAA 90 bp TGCTCTAGAAGGCTGGCTATTACTGTTATGAGAACAAGCACCATACCCCATCCACTTTCTTCCCTGTACTaGGAGTTGCTGGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: CSRRLAITVMRTSTIPHPLSSLY*ELLGCC
Trigger: GCAGCATCCCAGCAACTCCAAGTACAGGGAAGAAAG...TGGATGGGGTATGGTGCTTGTTCTCATAACAGTAATAGCCAGCCTTCTAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CAA 90 bp TCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATTCTCCCCAGTCCTCAACTTaGCTCTCAAGTGCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: SVGPWVQRSYITDMNHNSPQSST*LSSALR
Trigger: TCGGAGCGCACTTGAGAGCAAAGTTGAGGACTGGGG...AGAATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636681.1
CDS-3UTR CAA 90 bp AGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTGTGTCACTGACTTCCTaGGGCCCTCCAGGTCTCTTG +
Preference number: 5 (lower is better)
Translates to: RTTGNNEEVRRCLFTQTCVSLTS*GPPGLL
Trigger: CAAGAGACCTGGAGGGCCCAAGGAAGTCAGTGACAC...ACACGTTTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CAA 90 bp CCTGACTTCATTACTACTAGCTGGATAGCCAGAGAAAGATCACTTAGCCTTTCTGGCGGCTTCCACACTTaGCAGTCCAGGAAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: PDFITTSWIARERSLSLSGGFHT*QSRKVL
Trigger: AAGCACCTTCCTGGACTGCAAAGTGTGGAAGCCGCC...AGAAAGGCTAAGTGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAAGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636183.2
CDS-3UTR CAA 90 bp ACACTTCCAACCTTCTTGCCATTGCCAAAGGTCAGCCTTCTCCTAAGAAATGATTTGGCAGGTAGGGGCTaGGGAAGTGCTGATTGGTCA +
Preference number: 5 (lower is better)
Translates to: TLPTFLPLPKVSLLLRNDLAGRG*GSADWS
Trigger: TGACCAATCAGCACTTCCCAAGCCCCTACCTGCCAA...ATCATTTCTTAGGAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGGAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CAA 90 bp CCGCCCAATGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATTTAGATGGAGATTGCTaGCTCATTCTCCCAAGTCTC +
Preference number: 5 (lower is better)
Translates to: PPNGFTLSVAQTEPIYQDLDGDC*LILPSL
Trigger: GAGACTTGGGAGAATGAGCAAGCAATCTCCATCTAA...ATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CAA 90 bp CCGCCCAATGGGTTCACCTTGTCCGTTGCCCAGACAGAACCGATTTATCAAGATGATACACTCAAGCTGTaGAAAATGAGCAGCTGTCCT +
Preference number: 5 (lower is better)
Translates to: PPNGFTLSVAQTEPIYQDDTLKL*KMSSCP
Trigger: AGGACAGCTGCTCATTTTCAACAGCTTGAGTGTATC...ATCTTGATAAATCGGTTCTGTCTGGGCAACGGACAAGGTGAACCCATTGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS CCA 90 bp CTGCAGCTGAATTCAGCTCAACAGACACACTGGTCACCTATAATCTaGCACTGGGAAAGAAAGAAGTGGTGGCGACAACAGCTTCTATCT +
Preference number: 5 (lower is better)
Translates to: LQLNSAQQTHWSPII*HWERKKWWRQQLLS
Trigger: AGATAGAAGCTGTTGTCGCCACCACTTCTTTCTTTCCCAGTGCCAGATTATAGGTGACCAGTGTGTCTGTTGAGCTGAATTCAGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636405.1
CDS-3UTR CAA 90 bp AACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCAGTTCATACCATTCCATaGTGTAGTTCTTGCCAGTTA +
Preference number: 5 (lower is better)
Translates to: NVSAAMFLHTPVRRTAEAVHTIP*CSSCQL
Trigger: TAACTGGCAAGAACTACACAATGGAATGGTATGAAC...TGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp GTACTTGGAGTTGCTGGGATGCTGCTGATGACCTCTCCACCTGCCACGTTAAGTTGTACAGTTGCCAAGTaGGAAAAGTTCATACCATTC +
Preference number: 5 (lower is better)
Translates to: VLGVAGMLLMTSPPATLSCTVAK*EKFIPF
Trigger: GAATGGTATGAACTTTTCCAACTTGGCAACTGTACA...ACTTAACGTGGCAGGTGGAGAGGTCATCAGCAGCATCCCAGCAACTCCAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637537.2
CDS-3UTR CAA 90 bp TTGCTCAAAGGGCAGCAAAACTTAATTGGCAGATTTCTGCGTGGCTATGTTTTGAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLKGQQNLIGRFLRGYVLKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...CAAAACATAGCCACGCAGAAATCTGCCAATTAAGTTTTGCTGCCCTTTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CAA 90 bp TCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCCCAAATTCAGCCAACTaGTTAAAGGTCCTTAACACA +
Preference number: 5 (lower is better)
Translates to: SAAMFLHTPVRRTAEALCPNSAN*LKVLNT
Trigger: TGTGTTAAGGACCTTTAACAAGTTGGCTGAATTTGG...GCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp AGAGGGAGAACTACAGGAAACAATGAAGAAGTCAGAAGGTGCCTGTTTACCCAAACTGCGCTGACAGCTTaGTGGGAAGAGGGAGAACTA +
Preference number: 5 (lower is better)
Translates to: RGRTTGNNEEVRRCLFTQTALTA*WEEGEL
Trigger: TAGTTCTCCCTCTTCCCACAAAGCTGTCAGCGCAGT...TTGGGTAAACAGGCACCTTCTGACTTCTTCATTGTTTCCTGTAGTTCTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CCTGACTTCATTACTACTAGCTGGATAGCCAGAGAAAGATCACTTAGCCTTTCTACCAGTAACATCTGGTaGGCAGGCACTGGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: PDFITTSWIARERSLSLSTSNIW*AGTGLR
Trigger: CCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGT...AGAAAGGCTAAGTGATCTTTCTCTGGCTATCCAGCTAGTAGTAATGAAGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CTATCTGTAGGACCCTGGGTCCAAAGGTCCTACATAACTGATATGAACCATAATACCAGTAACATCTGGTaGGCAGGCACTGGTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LSVGPWVQRSYITDMNHNTSNIW*AGTGLR
Trigger: CCTCAGACCAGTGCCTGCCAACCAGATGTTACTGGT...ATTATGGTTCATATCAGTTATGTAGGACCTTTGGACCCAGGGTCCTACAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTAAGGAGCCACCAATATaGAGGGTTCCAAATAAAGTT +
Preference number: 5 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAKEPPI*RVPNKV
Trigger: AACTTTATTTGGAACCCTCAATATTGGTGGCTCCTT...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377453.9
ENST00000636183.2
CDS-3UTR CAA 90 bp CAGCCAGCCCAGGCTTCAGAATTCAGCTCAGATGTGATCTTTGTTGACCTGCCTGAATGGCTAGGTCTATaGTATTTTCTTAGCCCTCTC +
Preference number: 5 (lower is better)
Translates to: QPAQASEFSSDVIFVDLPEWLGL*YFLSPL
Trigger: GAGAGGGCTAAGAAAATACAATAGACCTAGCCATTC...AGGCAGGTCAACAAAGATCACATCTGAGCTGAATTCTGAAGCCTGGGCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS-3UTR CAA 90 bp ATCTCTGCACTGACAGTTGTGTTCGTAAACTCCAAATCCCTGTCTTCGCTTAAGCCAACCTTCTTGCCATaGCCAAAGGTCAGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: ISALTVVFVNSKSLSSLKPTFLP*PKVSLL
Trigger: GAGAAGGCTGACCTTTGGCAATGGCAAGAAGGTTGG...CTTAAGCGAAGACAGGGATTTGGAGTTTACGAACACAACTGTCAGTGCAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637397.2
CDS CCA 90 bp ACACACTGGTCACCTATAATCTGGCACTGGGAAAGAAAGAAGTGGTaGCGACAACAGCTTCTATCTAAGAATCCTAGATCCCCAAGGTTG +
Preference number: 5 (lower is better)
Translates to: THWSPIIWHWERKKW*RQQLLSKNPRSPRL
Trigger: CAACCTTGGGGATCTAGGATTCTTAGATAGAAGCTGTTGTCGCCACCACTTCTTTCTTTCCCAGTGCCAGATTATAGGTGACCAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636405.1
CDS-3UTR CAA 90 bp TATAGCAGCACAATTTGCAACTGCAAAAATATGGAACCAGCTCAAATGCCCATCAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: YSSTICNCKNMEPAQMPIKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...GATGGGCATTTGAGCTGGTTCCATATTTTTGCAGTTGCAAATTGTGCTGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485938.4
CDS-3UTR CAA 90 bp CAAGAGTCTTGTTTCCTGTTGGCCCAAAAACAGATGTTTCATTTCCCAGATAAGAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: QESCFLLAQKQMFHFPDKKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...CTTATCTGGGAAATGAAACATCTGTTTTTGGGCCAACAGGAAACAAGACTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000616833.6
ENST00000635915.1
ENST00000636681.1
ENST00000636780.2
CDS-3UTR CAA 90 bp GCAGCAATTCTGCTGATGTGCATTTTAACTTTATGCACCAAGGAAGAAAGGCTAAAAGCAGGCAGCGCCTaGATTACACCAGAAAGGGGC +
Preference number: 5 (lower is better)
Translates to: AAILLMCILTLCTKEERLKAGSA*ITPERG
Trigger: GCCCCTTTCTGGTGTAATCAAGGCGCTGCCTGCTTT...TAGCCTTTCTTCCTTGGTGCATAAAGTTAAAATGCACATCAGCAGAATTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636681.1
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp CTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTGAAGCACTATGCTCACTTTGCCATTTGGTaGAACATGTTTCCTGATATA +
Preference number: 5 (lower is better)
Translates to: LQPCSCIPRLEEPLKHYAHFAIW*NMFPDI
Trigger: TATATCAGGAAACATGTTCAACCAAATGGCAAAGTG...AGCATAGTGCTTCAGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377453.9
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
CDS-3UTR CAA 90 bp GAAGTCAGAAGGTGCCTGTTTACCCAAACGTGTCTGCAGCCATGTTCCTGCATAGAGTCTTGTTTCCTGTaGGCCCAAAAACAGATGTTT +
Preference number: 5 (lower is better)
Translates to: EVRRCLFTQTCLQPCSCIESCFL*AQKQMF
Trigger: AAACATCTGTTTTTGGGCCAACAGGAAACAAGACTC...TATGCAGGAACATGGCTGCAGACACGTTTGGGTAAACAGGCACCTTCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1
ENST00000636183.2
ENST00000636705.1
ENST00000636780.2
CDS-3UTR CAA 90 bp TACCCAAACGTGTCTGCAGCCATGTTCCTGCATACCCCGGTTAGAAGAACCGCTAATGGTGTTTTCTCCTaGAATAGAAACGTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: YPNVSAAMFLHTPVRRTANGVFS*NRNVFS
Trigger: ACTGAACACGTTTCTATTCAAGGAGAAAACACCATT...AGCGGTTCTTCTAACCGGGGTATGCAGGAACATGGCTGCAGACACGTTTGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000377453.9
ENST00000616833.6
ENST00000635915.1