RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000188603

Ensembl transcript IDs: ENST00000333496.14, ENST00000355477.10, ENST00000357806.11, ENST00000357857.14, ENST00000359984.12, ENST00000360019.8, ENST00000395653.9, ENST00000561505.2, ENST00000561689.6, ENST00000563874.5, ENST00000564091.6, ENST00000564574.5, ENST00000565047.1, ENST00000565140.5, ENST00000565236.1, ENST00000565316.6, ENST00000565688.5, ENST00000565778.6, ENST00000566040.1, ENST00000566057.5, ENST00000566083.6, ENST00000566472.1, ENST00000566816.1, ENST00000566824.6, ENST00000567160.1, ENST00000567495.6, ENST00000567804.1, ENST00000567963.6, ENST00000568076.6, ENST00000568422.6, ENST00000568443.2, ENST00000568452.6, ENST00000568472.6, ENST00000568497.6, ENST00000568558.6, ENST00000569030.5, ENST00000569430.7, ENST00000628023.3, ENST00000635861.1, ENST00000635958.1, ENST00000635973.1, ENST00000636147.2, ENST00000636172.1, ENST00000636228.1, ENST00000636355.1, ENST00000636839.1, ENST00000636853.1, ENST00000636907.1, ENST00000636977.1, ENST00000637050.1, ENST00000637100.1, ENST00000637107.1, ENST00000637110.1, ENST00000637184.1, ENST00000637578.1, ENST00000637686.1, ENST00000637699.1, ENST00000637871.1, ENST00000637985.1

Found 1508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTC +
Preference number: 1 (lower is better)
Translates to: NKASALPYSQTCREG*EHSSWRVSGVGLGV
Trigger: GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR GCA 90 bp CCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTG +
Preference number: 1 (lower is better)
Translates to: PCKGNKASALPYSQT*REGWEHSSWRVSGV
Trigger: CACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
3UTR TCA 90 bp GTGAGCAAGCCCCACAGGGACATACCCCAGCCATCATCCGAACCTTaGACACTGTCCACCTTTCCCGAAGGGAGAGGCTGGAGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: VSKPHRDIPQPSSEP*TLSTFPEGRGWSWS
Trigger: GCTCCAGCTCCAGCCTCTCCCTTCGGGAAAGGTGGACAGTGTTCAAGGTTCGGATGATGGCTGGGGTATGTCCCTGTGGGGCTTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637871.1
3UTR GCA 90 bp CGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTG +
Preference number: 1 (lower is better)
Translates to: RQGDPQCVRDAGGRH*KLPVLITGLQGDVV
Trigger: CACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR CCA 90 bp GCAGCCGTAGAGACAGAGTTGCAGTCAAATCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCTGGGTCCACATGGCTCTGGTTTCCC +
Preference number: 1 (lower is better)
Translates to: AAVETELQSNRDELL*GIGVGPGSTWLWFP
Trigger: GGGAAACCAGAGCCATGTGGACCCAGGCCCAACGCCGATCCCCCACAACAGCTCATCACGATTTGACTGCAACTCTGTCTCTACGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR GCA 90 bp ATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAG +
Preference number: 1 (lower is better)
Translates to: ITGLQGDVVEGVHVG*ASQEPLIQNDQEDE
Trigger: CTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR TCA 90 bp AGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACA +
Preference number: 1 (lower is better)
Translates to: RCSRRLRLPGAPHTE*SGRRGRCLAESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR TCA 90 bp GAGATGCTAGCGAAGACCACACCACACAGGCTGGTCCCCACAGAATaGGAAAAGGCAACCAGGACGAAGCTTCCAGCAGCACAAATCCCA +
Preference number: 1 (lower is better)
Translates to: EMLAKTTPHRLVPTE*EKATRTKLPAAQIP
Trigger: TGGGATTTGTGCTGCTGGAAGCTTCGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAGCCTGTGTGGTGTGGTCTTCGCTAGCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR CCA 90 bp CAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGGTT +
Preference number: 1 (lower is better)
Translates to: QEPLIQNDQEDEVDA*QKAEPHVCQQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR TCA 90 bp TGCCTCAGGTGCCAACCCTGCCATTCATTAGCTCTATCTACTCACTaGTGGAACAGTGAATACATAGATTTGATGGGGGCTGGACTACAT +
Preference number: 1 (lower is better)
Translates to: CLRCQPCHSLALSTH*WNSEYIDLMGAGLH
Trigger: ATGTAGTCCAGCCCCCATCAAATCTATGTATTCACTGTTCCATCAGTGAGTAGATAGAGCTAATGAATGGCAGGGTTGGCACCTGAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR-3UTR GCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp GAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: EPRQGDPQCVRDAGGRHCAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp AGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: RGSHAEAKPGAPTGRSPVDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAAGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PRQGDPQCVRDAGGRHCKDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...TTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: AAIANSRCSSLVSRAMLWGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp GAGCTGGAGCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: ELEPGFDSGASVLMRGCRVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...CCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: ESWQRKSCRGKARSPDREAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...CTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PGAHHWSPGRCCGRCSRRDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: DREIPSVSEMQVAAIANSDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...GGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PPLQTPGAHHWSPGRCCGDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...TCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: QEPRQGDPQCVRDAGGRHSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...ATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: QESWQRKSCRGKARSPDRGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: ALPYSQTCREGWEHSSWREGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGAGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RAGRGSHAEAKPGAPTGRAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...TCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: REIPSVSEMQVAAIANSRAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...CCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: AEAKPGAPTGRSPVCQRCGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...GCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGAGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: CRWPPLQTPGAHHWSPGRGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...TCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: AGRGSHAEAKPGAPTGRSPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTATGGACGGGGCTGTGTaGGTCCCAGCCCCAATCGCC +
Preference number: 2 (lower is better)
Translates to: RSPDREIPSVSEMQVAAIMDGAV*VPAPIA
Trigger: GGCGATTGGGGCTGGGACCCACACAGCCCCGTCCAT...AATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637871.1
3UTR-3UTR TCA 90 bp GCAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGACAGCAAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 2 (lower is better)
Translates to: ATRNSWPAAGQGYPAWTARGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...TGCTGTCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567495.6
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: EAKPGAPTGRSPVCQRCRSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: DAGGRHCKLPVLITGLQGSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: QSQEPRQGDPQCVRDAGGAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...GCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp ATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGGTTGAGGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: MLGRKPNHTSASRNTRLRGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CCTCAACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCAGGTGAATGTGACCTaGGTCCTGAGGATCCCGAGT +
Preference number: 2 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVQVNVT*VLRIPS
Trigger: ACTCGGGATCCTCAGGACGCAGGTCACATTCACCTG...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp GAGCTGGAGCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: ELEPGFDSGASVLMRGCRSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: CRGKARSPDREIPSVSEMTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...CATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RGKARSPDREIPSVSEMQTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...CTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: RGKARSPDREIPSVSEMQGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: VAAIANSRCSSLVSRAMLGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: LQGDVVEGVHVGCASQEPAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SPGRCCGRCSRRLRLPGAPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...GGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KARSPDREIPSVSEMQVAPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...GGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: APTGRSPVCQRCRWPPLQEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...TTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: QSQEPRQGDPQCVRDAGGEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...GCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: KARSPDREIPSVSEMQVAEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...GGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGAGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: CRWPPLQTPGAHHWSPGREGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...TCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CCGAACCACACGTCTGCCAGCAGGAACACCAGGTTGAGGCACTGCAGCAGGGCCGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: PNHTSASRNTRLRHCSRAVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...GGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp AGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGGTTGAGGCACTGCAGCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: RKPNHTSASRNTRLRHCSAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GCTGCAGTGCCTCAACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp TATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: YQESWQRKSCRGKARSPDAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCGGAGAGAAGAGCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: AERRAGGKDASLVQHLVPGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...TGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCTCTTCTCTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 2 (lower is better)
Translates to: RSPDREIPSVSEMQVAAISPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...AATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp TGTGAGCAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGAGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CEQQEIAGQQQGRDTQHGDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...TCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTGCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000567495.6
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GAGCTGGAGCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGGGCCTCAGGAGATGTaGGCAACAAGAAATAGCTGG +
Preference number: 2 (lower is better)
Translates to: ELEPGFDSGASVLMRGCRGPQEM*ATRNSW
Trigger: CCAGCTATTTCTTGTTGCTCACATCTCCTGAGGCCC...CCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: VAAIANSRCSSLVSRAMLSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp AGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: SQEPRQGDPQCVRDAGGRTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...GCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp GTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: VGCASQEPLIQNDQEDEVGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...TACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp AGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACAGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: RRGRCLAESRTTRLPAGTGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...TGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTCAGGTGAATGTGACCTaGGTCCTGAGGATCCCGAGT +
Preference number: 2 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPQVNVT*VLRIPS
Trigger: ACTCGGGATCCTCAGGACGCAGGTCACATTCACCTG...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTCAGGTGAATGTGACCTaGGTCCTGAGGATCCCGAGT +
Preference number: 2 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGQVNVT*VLRIPS
Trigger: ACTCGGGATCCTCAGGACGCAGGTCACATTCACCTG...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWASDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp GGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGCTGAGCGTGACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GKDASLVQHLVPAVLLSVTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...CACGCTCAGCAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: GAPTGRSPVCQRCRWPPLAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...CAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: AGRGSHAEAKPGAPTGRSAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGACCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: HAEAKPGAPTGRSPVCQRPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...TCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: APTGRSPVCQRCRWPPLQVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...TTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGATTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PLQGKQGFSPSLLPDLPGFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...TCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR CCA 90 bp GAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCTTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: ETRLQPFPTPRPAGKAGSFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...GCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp CCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGATGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PLQGKQGFSPSLLPDLPGWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...TCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR CCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCAAGAAACTCCCCAAGTaGGAGACAATGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVKKLPK*ETMAGP
Trigger: GGGGCCAGCCATTGTCTCCCACTTGGGGAGTTTCTT...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR CCA 90 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: LQGDVVEGVHVGCASQEPQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...GGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp ACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: TPGAHHWSPGRCCGRCSRAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...ACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: GAHHWSPGRCCGRCSRRLAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...CAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: PVLITGLQGDVVEGVHVGGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...GCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp ATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: IRRAGRGSHAEAKPGAPTGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...TGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: PVCQRCRWPPLQTPGAHHGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...GTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGACCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: PPLQTPGAHHWSPGRCCGPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...TCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: EYQESWQRKSCRGKARSPPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATACTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 2 (lower is better)
Translates to: ELAEEVMQRQSQEPRQGDSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...ATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CAGTCAAATCGTGATGAGCTGTTGTGGGGGATCGGCGTTGGGCCTGGGTCCACAAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: QSNRDELLWGIGVGPGSTSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...TGTGGACCCAGGCCCAACGCCGATCCCCCACAACAGCTCATCACGATTTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR TCA 90 bp TCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: SQEPLIQNDQEDEVDAWQGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp CGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: RHCKLPVLITGLQGDVVETRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...TTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: GVHVGCASQEPLIQNDQETRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...TTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAGCCCACTGCCCTCGCTCCTCTTACCAGCGGTATTGCTGAGCGTGACTCAGGGGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: QPTALAPLTSGIAERDSGAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...CCCTGAGTCACGCTCAGCAATACCGCTGGTAAGAGGAGCGAGGGCAGTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR GCA 90 bp ACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 2 (lower is better)
Translates to: TPGAHHWSPGRCCGRCSRGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...ACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: EIPSVSEMQVAAIANSRCAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGAGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: RAGRGSHAEAKPGAPTGRAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...TCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CCGAGTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PSIRRAGRGSHAEAKPGAPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...GGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: VSEMQVAAIANSRCSSLVEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...GACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GSHAEAKPGAPTGRSPVCVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...ACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp TGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: CKGNKASALPYSQTCREGTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...GCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp GAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: ESWQRKSCRGKARSPDREQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...CTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGACAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: CRWPPLQTPGAHHWSPGRQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...TCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: RHCKLPVLITGLQGDVVEGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...TTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp TGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: CQRCRWPPLQTPGAHHWSGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...AGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 2 (lower is better)
Translates to: GCASQEPLIQNDQEDEVDGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...ATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAACCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: GVHVGCASQEPLIQNDQEPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...TTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGGCCAAGAGGAGCCAACAATTTGATGACGAGTGTGGGGAGGATGTCCGCCAGGGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 2 (lower is better)
Translates to: RPRGANNLMTSVGRMSARVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...CCTGGCGGACATCCTCCCCACACTCGTCATCAAATTGTTGGCTCCTCTTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR CAA 90 bp CCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATaGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGT +
Preference number: 2 (lower is better)
Translates to: PTGRSPVCQRCRWPP*QTPGAHHWSPGRCC
Trigger: ACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR CAA 90 bp GGTGAGCAAGCCCCACAGGGACATACCCCAGCCATCATCCGAACCTaGAACACTGTCCACCTTTCCCGAAGGGAGAGGCTGGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GEQAPQGHTPAIIRT*NTVHLSRRERLELE
Trigger: CTCCAGCTCCAGCCTCTCCCTTCGGGAAAGGTGGACAGTGTTCAAGGTTCGGATGATGGCTGGGGTATGTCCCTGTGGGGCTTGCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637871.1
3UTR-3UTR TCA 90 bp GAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 2 (lower is better)
Translates to: EVDAWQKAEPHVCQQEHQSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: ESWQRKSCRGKARSPDRETTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...CTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp GATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGCAGGAACACCAGGTTaGGGCACTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: DAGGRHCKLPVLITGLQGAGTPG*GTVIPA
Trigger: AGCTGGGATTACAGTGCCTCAACCTGGTGTTCCTGC...GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565140.5
ENST00000569030.5
ENST00000637184.1
3UTR-3UTR GCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGCAGGTGAATGTGACCTaGGTCCTGAGGATCCCGAGT +
Preference number: 2 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWQVNVT*VLRIPS
Trigger: ACTCGGGATCCTCAGGACGCAGGTCACATTCACCTG...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp AACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: NKASALPYSQTCREGWEHSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACATCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp GAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAAACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: EDEVDAWQKAEPHVCQQETRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...TTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: PQCVRDAGGRHCKLPVLIAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: HHWSPGRCCGRCSRRLRLAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: DREIPSVSEMQVAAIANSAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CCGAGTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: PSIRRAGRGSHAEAKPGAAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATACTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: SEMQVAAIANSRCSSLVSAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp ACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: TPGAHHWSPGRCCGRCSRPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...ACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: DREIPSVSEMQVAAIANSVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...GGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGCTGAGCTTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: GGKDASLVQHLVPAVLLSFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...GCTCAGCAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp ACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: TGRSPVCQRCRWPPLQTPWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...GGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp CGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: RCCGRCSRRLRLPGAPHTTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...TGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp GAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACAC +
Preference number: 2 (lower is better)
Translates to: EPRQGDPQCVRDAGGRHCDEVDA*QKAEPH
Trigger: GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC...GCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp TCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCGGGCCTCAGGAGATGTaGGCAACAAGAAATAGCTGG +
Preference number: 2 (lower is better)
Translates to: SPGRCCGRCSRRLRLPGAGPQEM*ATRNSW
Trigger: CCAGCTATTTCTTGTTGCTCACATCTCCTGAGGCCC...GGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: EIPSVSEMQVAAIANSRCTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...GCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp CATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGAACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: HAEAKPGAPTGRSPVCQRTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...TCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp AGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: REIPSVSEMQVAAIANSRTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...CCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp GATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: DQEDEVDAWQKAEPHVCQAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...CTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp AATGTGACCTGCGTCCTGAGGATCCCGAGTATCAGGAGAGCTGGCAGAGGAAGTGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: NVTCVLRIPSIRRAGRGSAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...ACTTCCTCTGCCAGCTCTCCTGATACTCGGGATCCTCAGGACGCAGGTCACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: LQGDVVEGVHVGCASQEPAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...GGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATAGGCTTGAGAATCGCTTaGATCTGGGAGGCAGGGGTT +
Preference number: 2 (lower is better)
Translates to: GDVVEGVHVGCASQEPLIGLRIA*IWEAGV
Trigger: AACCCCTGCCTCCCAGATTCAAGCGATTCTCAAGCC...TATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569030.5
ENST00000637184.1
3UTR-3UTR GCA 90 bp CCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGCAGGTGAATGTGACCTaGGTCCTGAGGATCCCGAGT +
Preference number: 2 (lower is better)
Translates to: PARETRLQPFPTPRPAGKQVNVT*VLRIPS
Trigger: ACTCGGGATCCTCAGGACGCAGGTCACATTCACCTG...CTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR GCA 90 bp CCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: PARETRLQPFPTPRPAGKSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR GCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGATCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AGCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGCTGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: SGRQRRQPGTASGTSGIAAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...AGCAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: AEEVMQRQSQEPRQGDPQIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...CTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: QESWQRKSCRGKARSPDRIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...CCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 2 (lower is better)
Translates to: QCVRDAGGRHCKLPVLITAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...AGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: CASQEPLIQNDQEDEVDAEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...AGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GAHHWSPGRCCGRCSRRLVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...CAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: EVDAWQKAEPHVCQQEHQWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...CTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp GAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCAAGAAACTCCCCAAGTaGGAGACAATGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: EIPSVSEMQVAAIANSRCKKLPK*ETMAGP
Trigger: GGGGCCAGCCATTGTCTCCCACTTGGGGAGTTTCTT...GCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR CCA 90 bp ACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TGRSPVCQRCRWPPLQTPQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...GGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: AAIANSRCSSLVSRAMLWAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...CCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCGGAGAGAAGAGCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: AERRAGGKDASLVQHLVPAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...TGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCTCTTCTCTCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: GSHAEAKPGAPTGRSPVCAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...ACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: RGSHAEAKPGAPTGRSPVAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...CACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCGCCTGGTACAGCATCTaGTACCTGAGGTTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: LAEEVMQRQSQEPRQGDPAWYSI*YLRLGL
Trigger: CAACCCTAACCTCAGGTACCAGATGCTGTACCAGGC...GGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp CCAAGGCCTGATGAGATGCTAGCGAAGACCACACCACACAGGCTGGTCCCCACACCCGATGTCCTCTTGTaGCTAAGGATGTCGTGGGCG +
Preference number: 2 (lower is better)
Translates to: PRPDEMLAKTTPHRLVPTPDVLL*LRMSWA
Trigger: CGCCCACGACATCCTTAGCCACAAGAGGACATCGGG...TGTGGGGACCAGCCTGTGTGGTGTGGTCTTCGCTAGCATCTCATCAGGCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CCA 90 bp AGGCCAAGAGGAGCCAACAATTTGATGACGAGTGTGGGGAGGATGTCCGCCAGGGGGCCTGGGTCCACATaGCTCTGGTTTCCCGATGTC +
Preference number: 2 (lower is better)
Translates to: RPRGANNLMTSVGRMSARGPGST*LWFPDV
Trigger: GACATCGGGAAACCAGAGCCATGTGGACCCAGGCCC...CCTGGCGGACATCCTCCCCACACTCGTCATCAAATTGTTGGCTCCTCTTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR TCA 90 bp CATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGAGGGCCTCAGGAGATGTaGGCAACAAGAAATAGCTGG +
Preference number: 2 (lower is better)
Translates to: HAEAKPGAPTGRSPVCQRGPQEM*ATRNSW
Trigger: CCAGCTATTTCTTGTTGCTCACATCTCCTGAGGCCC...TCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGCTGAGCGTGACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: GKDASLVQHLVPAVLLSVTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...CACGCTCAGCAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR TCA 90 bp GAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: ESWQRKSCRGKARSPDREAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...CTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp CATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCGGCTTGAGAATCGCTTaGATCTGGGAGGCAGGGGTT +
Preference number: 2 (lower is better)
Translates to: HHWSPGRCCGRCSRRLRLGLRIA*IWEAGV
Trigger: AACCCCTGCCTCCCAGATTCAAGCGATTCTCAAGCC...GAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569030.5
ENST00000637184.1
3UTR-3UTR GCA 90 bp CAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 2 (lower is better)
Translates to: QNDQEDEVDAWQKAEPHVPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...GACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp TGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: CQRCRWPPLQTPGAHHWSAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...AGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: VLITGLQGDVVEGVHVGCAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...GCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGGGAAGACGAGGTAGATaGTTGGCAGAAAGCCGAACC +
Preference number: 2 (lower is better)
Translates to: AAIANSRCSSLVSRAMLWGRRGR*LAESRT
Trigger: GGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCC...CCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp AGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: RGKARSPDREIPSVSEMQIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...CTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CCGAGTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCAAGAAACTCCCCAAGTaGGAGACAATGGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: PSIRRAGRGSHAEAKPGAKKLPK*ETMAGP
Trigger: GGGGCCAGCCATTGTCTCCCACTTGGGGAGTTTCTT...GGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637107.1
ENST00000637184.1
3UTR-3UTR CCA 90 bp CAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGACAGCAGCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: QQEIAGQQQGRDTQHGQQQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...CTGCTGTCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567495.6
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCATCTGGTACCAGCGGTATTGCTGAGCGTGACTCAGGGAAGTGTTCCAGAAAACCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: ASGTSGIAERDSGKCSRKPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...TTTTCTGGAACACTTCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: EPLIQNDQEDEVDAWQKAPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: RCCGRCSRRLRLPGAPHTAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...TGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AGAGCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: RAGGKDASLVQHLVPAVLAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...CAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACAC +
Preference number: 2 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRDEVDA*QKAEPH
Trigger: GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CACACAGGCTGGTCCCCACAGAATGAGAAAAGGCAACCAGGACGAAGCTTCCAGCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCT +
Preference number: 2 (lower is better)
Translates to: HTGWSPQNEKRQPGRSFQRDELL*GIGVGP
Trigger: AGGCCCAACGCCGATCCCCCACAACAGCTCATCACG...CTGGAAGCTTCGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAGCCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR CAA 90 bp ACAGCAGCCGTAGAGACAGAGTTGCAGTCAAATCGTGATGAGCTGTaGTGGGGGATCGGCGTTGGGCCTGGGTCCACATGGCTCTGGTTT +
Preference number: 2 (lower is better)
Translates to: TAAVETELQSNRDEL*WGIGVGPGSTWLWF
Trigger: AAACCAGAGCCATGTGGACCCAGGCCCAACGCCGATCCCCCACAACAGCTCATCACGATTTGACTGCAACTCTGTCTCTACGGCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR TCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTTATTCAGAAGGCATaGTGCCAGGAAGAAACTCCC +
Preference number: 2 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQFIQKA*CQEETP
Trigger: GGGAGTTTCTTCCTGGCATCATGCCTTCTGAATAAA...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
3UTR-3UTR TCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: EIPSVSEMQVAAIANSRCAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...GCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp TGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTGCAGGAACACCAGGTTaGGGCACTGTAATCCCAGCT +
Preference number: 2 (lower is better)
Translates to: CQRCRWPPLQTPGAHHWSAGTPG*GTVIPA
Trigger: AGCTGGGATTACAGTGCCTCAACCTGGTGTTCCTGC...AGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000565140.5
ENST00000569030.5
ENST00000637184.1
3UTR-3UTR GCA 90 bp GTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCGGAAGACGAGGTAGATaGTTGGCAGAAAGCCGAACC +
Preference number: 2 (lower is better)
Translates to: VSEMQVAAIANSRCSSLVGRRGR*LAESRT
Trigger: GGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCC...GACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGACGAGGTAGATaGTTGGCAGAAAGCCGAACC +
Preference number: 2 (lower is better)
Translates to: WPPLQTPGAHHWSPGRCCGRRGR*LAESRT
Trigger: GGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCC...ACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SEMQVAAIANSRCSSLVSIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...GGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: HHWSPGRCCGRCSRRLRLIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...GAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp GAGTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: EYQESWQRKSCRGKARSPIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...GGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCAATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: PSVSEMQVAAIANSRCSSIANSR*SSLVSR
Trigger: CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAAT...TGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp CCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: PLIQNDQEDEVDAWQKAEPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...TTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCTG +
Preference number: 2 (lower is better)
Translates to: GVHVGCASQEPLIQNDQEAKTPA*YSIWYL
Trigger: CAGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...TTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp AAGGTGACCTCCCCAAGGCCTGATGAGATGCTAGCGAAGACCACACCACACAGGGGGTCCACATGGCTCTaGTTTCCCGATGTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: KVTSPRPDEMLAKTTPHRGSTWL*FPDVLL
Trigger: CAAGAGGACATCGGGAAACCAGAGCCATGTGGACCC...CCTGTGTGGTGTGGTCTTCGCTAGCATCTCATCAGGCCTTGGGGAGGTCACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR TCA 90 bp ATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: ITGLQGDVVEGVHVGCASAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...GGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp TGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTGGAAGACGAGGTAGATaGTTGGCAGAAAGCCGAACC +
Preference number: 2 (lower is better)
Translates to: CVRDAGGRHCKLPVLITGGRRGR*LAESRT
Trigger: GGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCC...ACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGAAGACGAGGTAGATaGTTGGCAGAAAGCCGAACC +
Preference number: 2 (lower is better)
Translates to: RHCKLPVLITGLQGDVVEGRRGR*LAESRT
Trigger: GGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCC...TTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CAAATCGTGATGAGCTGTTGTGGGGGATCGGCGTTGGGCCTGGGTCCACATGGCCATAAGAGAAGTTGTTaGAAAGGCCCAGCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: QIVMSCCGGSALGLGPHGHKRSC*KGPAAC
Trigger: ACAGGCTGCTGGGCCTTTGCAACAACTTCTCTTATG...GCCATGTGGACCCAGGCCCAACGCCGATCCCCCACAACAGCTCATCACGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CCA 90 bp GTACAGCATCTGGTACCAGCGGTATTGCTGAGCGTGACTCAGGGAAGTGTTCCACAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: VQHLVPAVLLSVTQGSVPQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...TGGAACACTTCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAGATGCTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACAC +
Preference number: 2 (lower is better)
Translates to: GCASQEPLIQNDQEDEVDDEVDA*QKAEPH
Trigger: GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC...ATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACAC +
Preference number: 2 (lower is better)
Translates to: GVHVGCASQEPLIQNDQEDEVDA*QKAEPH
Trigger: GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC...TTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp TGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTTTATTCAGAAGGCATaGTGCCAGGAAGAAACTCCC +
Preference number: 2 (lower is better)
Translates to: CKGNKASALPYSQTCREGFIQKA*CQEETP
Trigger: GGGAGTTTCTTCCTGGCATCATGCCTTCTGAATAAA...GCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
3UTR-3UTR TCA 90 bp CTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCAGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: LIQNDQEDEVDAWQKAEPAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...TGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp TGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: CVRDAGGRHCKLPVLITGAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...ACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR GCA 90 bp CTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LIQNDQEDEVDAWQKAEPPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...TGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGGTTGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACAC +
Preference number: 2 (lower is better)
Translates to: VDAWQKAEPHVCQQEHQVDEVDA*QKAEPH
Trigger: GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC...AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp TGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTGCCTGGTACAGCATCTaGTACCTGAGGTTAGGGTTG +
Preference number: 2 (lower is better)
Translates to: CASQEPLIQNDQEDEVDAAWYSI*YLRLGL
Trigger: CAACCCTAACCTCAGGTACCAGATGCTGTACCAGGC...AGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp TGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCAAGGGAGAAATCTGCTaGCATACCTTCTTTATGCTG +
Preference number: 2 (lower is better)
Translates to: CKGNKASALPYSQTCREGKGEIC*HTFFML
Trigger: CAGCATAAAGAAGGTATGTCAGCAGATTTCTCCCTT...GCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR-3UTR CCA 90 bp AAAGTAAACTACGACCAAGGGAACAATGTACCACAGCAGACCCTTGAACACTGTCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: KVNYDQGNNVPQQTLEHCPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...ACAGTGTTCAAGGGTCTGCTGTGGTACATTGTTCCCTTGGTCGTAGTTTACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp CAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 2 (lower is better)
Translates to: QEPLIQNDQEDEVDAWQKTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...TTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp CCAGAAAAAGAGGAGTTCAAAAAGTCCCTGGTTAATGAAATACTCGGCAAAGTAGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: PEKEEFKKSLVNEILGKVGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...TACTTTGCCGAGTATTTCATTAACCAGGGACTTTTTGAACTCCTCTTTTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp CTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCAGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTT +
Preference number: 2 (lower is better)
Translates to: LIQNDQEDEVDAWQKAEPAEPHV*QQEHQV
Trigger: AACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGC...TGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp AAAATCGGCATTTATTCAGAAGGCATGATGCCAGGAAGAAACTCCCCAAGTGGGTTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: KIGIYSEGMMPGRNSPSGFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...CCCACTTGGGGAGTTTCTTCCTGGCATCATGCCTTCTGAATAAATGCCGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
3UTR-3UTR CCA 90 bp AAAATCGGCATTTATTCAGAAGGCATGATGCCAGGAAGAAACTCCCCAAGTGGGACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: KIGIYSEGMMPGRNSPSGTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...CCCACTTGGGGAGTTTCTTCCTGGCATCATGCCTTCTGAATAAATGCCGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
3UTR-3UTR CCA 90 bp CTATTAACCAGTGGGTCAGCATTTCCTAGATCTGGGTCCACAAACATCACTGGTACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 2 (lower is better)
Translates to: LLTSGSAFPRSGSTNITGTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...ACCAGTGATGTTTGTGGACCCAGATCTAGGAAATGCTGACCCACTGGTTAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR-3UTR CCA 90 bp CCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAAGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 2 (lower is better)
Translates to: PLIQNDQEDEVDAWQKAEAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...TTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR TCA 90 bp GGAAGTGTTCCAGAAAAAGAGGAGTTCAAAAAGTCCCTGGTTAATGAAATACTCGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: GSVPEKEEFKKSLVNEILGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...GAGTATTTCATTAACCAGGGACTTTTTGAACTCCTCTTTTTCTGGAACACTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR TCA 90 bp GAAAAAGAGGAGTTCAAAAAGTCCCTGGTTAATGAAATACTCGGCAAAGTAAACGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: EKEEFKKSLVNEILGKVNGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...GTTTACTTTGCCGAGTATTTCATTAACCAGGGACTTTTTGAACTCCTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR GCA 90 bp CTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCATCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: LIQNDQEDEVDAWQKAEPSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...TGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGTTCAAAAAGTCCCTGGTTAATGAAATACTCGGCAAAGTAAACTACGACCAAGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: EFKKSLVNEILGKVNYDQAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...TTGGTCGTAGTTTACTTTGCCGAGTATTTCATTAACCAGGGACTTTTTGAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp GATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: DPQCVRDAGGRHCKLPVLSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...GAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp TGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: CRGKARSPDREIPSVSEMSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...CATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp GGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: GRHCKLPVLITGLQGDVVSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...CACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR GCA 90 bp AAAATCGGCATTTATTCAGAAGGCATGATGCCAGGAAGAAACTCCCCAAGTGGGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: KIGIYSEGMMPGRNSPSGSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CCCACTTGGGGAGTTTCTTCCTGGCATCATGCCTTCTGAATAAATGCCGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
3UTR-3UTR GCA 90 bp GCATTTCCTAGATCTGGGTCCACAAACATCACTGGTCGTAATGGAGTAGTCTCATCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 2 (lower is better)
Translates to: AFPRSGSTNITGRNGVVSSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...TGAGACTACTCCATTACGACCAGTGATGTTTGTGGACCCAGATCTAGGAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR-3UTR CCA 90 bp AGGGAAGTGTTCCAGAAAAAGAGGAGTTCAAAAAGTCCCTGGTTAATGAAATACCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 2 (lower is better)
Translates to: REVFQKKRSSKSPWLMKYPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GTATTTCATTAACCAGGGACTTTTTGAACTCCTCTTTTTCTGGAACACTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp GCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCTGAGGTTAGGGTTAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: AGGKDASLVQHLVPEVRVSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...AACCCTAACCTCAGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp CTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCGAACCAGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACAC +
Preference number: 2 (lower is better)
Translates to: LIQNDQEDEVDAWQKAEPDEVDA*QKAEPH
Trigger: GTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC...TGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CCA 90 bp GAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: EVDAWQKAEPHVCQQEHQSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...CTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp AATGTGACCTGCGTCCTGAGGATCCCGAGTATCAGGAGAGCTGGCAGAGGAAGTTCACTTACAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: NVTCVLRIPSIRRAGRGSSLTSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTGTAAGTGA...ACTTCCTCTGCCAGCTCTCCTGATACTCGGGATCCTCAGGACGCAGGTCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637871.1
3UTR-3UTR TCA 90 bp AGTGAATGGCAGGGTTGGCACCTGAAAGTCAGTTCCTTCTGCCCCCAAAGCCCAGGTAACAATGAAGTATaGGAAACACTAAGTCAGACT +
Preference number: 2 (lower is better)
Translates to: SEWQGWHLKVSSFCPQSPGNNEV*ETLSQT
Trigger: AGTCTGACTTAGTGTTTCTCATACTTCATTGTTACC...TGGGCTTTGGGGGCAGAAGGAACTGACTTTCAGGTGCCAACCCTGCCATTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR-3UTR TCA 90 bp TACAAGTCCCTGGTTAATGAAATACTCGGCAAAGTAAACTACGACCAAGGGAACGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGA +
Preference number: 2 (lower is better)
Translates to: YKSLVNEILGKVNYDQGNAPHTE*SGRRGR
Trigger: TCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGC...GTTCCCTTGGTCGTAGTTTACTTTGCCGAGTATTTCATTAACCAGGGACTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637871.1
3UTR-3UTR CCA 90 bp GCATCTGGTACCAGCGGTATTGCTGAGCGTGACTCAGGGAAGTGTTCCAGAAAAAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: ASGTSGIAERDSGKCSRKSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...TTTTCTGGAACACTTCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR CCA 90 bp GAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTGGCAGAAAGCCAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: EPLIQNDQEDEVDAWQKASSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...GGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CCA 90 bp CATCTGGTACCAGCGGTATTGCTGAGCGTGACTCAGGGAAGTGTTCCAGAAAAAAGTTCAAAAAGTCCCTaGTTAATGAAATACTCGGCA +
Preference number: 2 (lower is better)
Translates to: HLVPAVLLSVTQGSVPEKSSKSP*LMKYSA
Trigger: TGCCGAGTATTTCATTAACCAGGGACTTTTTGAACT...TTTTTCTGGAACACTTCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAGATG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
3UTR CCA 72 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: SALPYSQTCREG*EHSSWRVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR TCA 72 bp TGGAGCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGCTCTCTGCTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: WSLASTPGPRFL*GAAGLRSLLLL
Trigger: AAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp AGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTTGCAGGTGGCCGCCATaGCAAACTCCCGGTGCTCAT +
Preference number: 3 (lower is better)
Translates to: RSPDREIPSVSEMQVAAICRWPP*QTPGAH
Trigger: ATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCA...AATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp CAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCTGCAGGTGGCCGCCATaGCAAACTCCCGGTGCTCAT +
Preference number: 3 (lower is better)
Translates to: QSQEPRQGDPQCVRDAGGCRWPP*QTPGAH
Trigger: ATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCA...GCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp ATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGCTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: MQVAAIANSRCSSLVSRALVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...CGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR GCA 72 bp GGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTC +
Preference number: 3 (lower is better)
Translates to: GNKASALPYSQT*REGWEHSSWRV
Trigger: GACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
3UTR GCA 72 bp GATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATCACTGGTCTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: DPQCVRDAGGRH*KLPVLITGLQG
Trigger: GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp TGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: CRGKARSPDREIPSVSEMLVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...CATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: GSHAEAKPGAPTGRSPVCLVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...ACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp CCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: PGRCCGRCSRRLRLPGAPRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...AGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAAGCAGGAACACCAGGTaGAGGCACTGTAATCCCAGC +
Preference number: 3 (lower is better)
Translates to: GRGSHAEAKPGAPTGRSPSRNTR*RHCNPS
Trigger: GCTGGGATTACAGTGCCTCAACCTGGTGTTCCTGCT...TGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000565140.5
ENST00000569030.5
ENST00000637184.1
3UTR TCA 72 bp CAACCAGGACGAAGCTTCCAGCAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGTAGGGCAGCAGGTGAA +
Preference number: 3 (lower is better)
Translates to: QPGRSFQQHKSH*REPGGCRAAGE
Trigger: TTCACCTGCTGCCCTACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTGCTGGAAGCTTCGTCCTGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR TCA 72 bp CTTCTTCCCCTCCAGGGTCCTGGGCCTCAGGAGATGTaGGCAACAAGAAATAGCTGGCCAGCAGCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: LLPLQGPGPQEM*ATRNSWPAAGQ
Trigger: CTGCCCTGCTGCTGGCCAGCTATTTCTTGTTGCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR TCA 72 bp CCCCACAGGGACATACCCCAGCCATCATCCGAACCTTaGACACTGTCCACCTTTCCCGAAGGGAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: PHRDIPQPSSEP*TLSTFPEGRGW
Trigger: CCAGCCTCTCCCTTCGGGAAAGGTGGACAGTGTTCAAGGTTCGGATGATGGCTGGGGTATGTCCCTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637871.1
3UTR GCA 72 bp TCTGACCTGTCCCTCTGCCCACAGGTGAATGTGACCTaGGTCCTGAGGATCCCGAGTATCAGGAGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: SDLSLCPQVNVT*VLRIPSIRRAG
Trigger: GCCAGCTCTCCTGATACTCGGGATCCTCAGGACGCAGGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp TCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: SPVCQRCRWPPLQTPGAHLVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...ATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp TGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTCTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: WPPLQTPGAHHWSPGRCCLVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...ACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: VSGELAEEVMQRQSQEPRLVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...TCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: APTGRSPVCQRCRWPPLQRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...TTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: DAGGRHCKLPVLITGLQGRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGGCCAAGATCACGCCATaGTACTCTAGCCTGAGCTAC +
Preference number: 3 (lower is better)
Translates to: AKPGAPTGRSPVCQRCRWAKITP*YSSLSY
Trigger: GTAGCTCAGGCTAGAGTACAATGGCGTGATCTTGGC...CCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565140.5
3UTR-3UTR CAA 90 bp AGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGAAGGCTTGAGAATCGCTaGAATCTGGGAGGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: RAGRGSHAEAKPGAPTGRRLENR*NLGGRG
Trigger: ACCCCTGCCTCCCAGATTCAAGCGATTCTCAAGCCT...TCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569030.5
ENST00000637184.1
3UTR-3UTR CAA 90 bp GGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTCTCTTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: GGRHCKLPVLITGLQGDVLLPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTAAGAG...AACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR CAA 90 bp CCACAGAATGAGAAAAGGCAACCAGGACGAAGCTTCCAGCAGCACAAATCCCACTGTGGGGGATCGGCGTaGGGCCTGGGTCCACATGGC +
Preference number: 3 (lower is better)
Translates to: PQNEKRQPGRSFQQHKSHCGGSA*GLGPHG
Trigger: GCCATGTGGACCCAGGCCCAACGCCGATCCCCCACA...GTGGGATTTGTGCTGCTGGAAGCTTCGTCCTGGTTGCCTTTTCTCATTCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CAA 90 bp GATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCTACCACAGCAGACCCTaGAACACTGTCCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: DPQCVRDAGGRHCKLPVLYHSRP*NTVHLS
Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGTA...GAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CAA 90 bp GAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: EMQVAAIANSRCSSLVSRRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...CCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR GCA 72 bp GAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTaGCAGCAGGAACACCAGGTTGAGGCACTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: EVDAWQKAEPHV*QQEHQVEALQQ
Trigger: CTGCTGCAGTGCCTCAACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR GCA 72 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTCATACAGAATGATCAG +
Preference number: 3 (lower is better)
Translates to: LQGDVVEGVHVG*ASQEPLIQNDQ
Trigger: CTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR GCA 72 bp TCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTaGTCATCACTGGTCTCCAGGGCGATGTTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: SEMQVAAIANSR*SSLVSRAMLWK
Trigger: CTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR CCA 72 bp GAGACAGAGTTGCAGTCAAATCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCTGGGTCCACATGGCTC +
Preference number: 3 (lower is better)
Translates to: ETELQSNRDELL*GIGVGPGSTWL
Trigger: GAGCCATGTGGACCCAGGCCCAACGCCGATCCCCCACAACAGCTCATCACGATTTGACTGCAACTCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CAA 90 bp CCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGTACCACAGCAGACCCTaGAACACTGTCCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: PGAHHWSPGRCCGRCSRRYHSRP*NTVHLS
Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGTA...CCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CAA 90 bp AGCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGCTAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: SGRQRRQPGTASGTSGIARRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...AGCAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp ATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: IRRAGRGSHAEAKPGAPTRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...TGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
3UTR TCA 72 bp CGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAATaGTCAGGAAGACGAGGTAGATGCTTGGCAGAAAGC +
Preference number: 3 (lower is better)
Translates to: RRLRLPGAPHTE*SGRRGRCLAES
Trigger: GCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR TCA 72 bp GCGAAGACCACACCACACAGGCTGGTCCCCACAGAATaGGAAAAGGCAACCAGGACGAAGCTTCCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: AKTTPHRLVPTE*EKATRTKLPAA
Trigger: TGCTGCTGGAAGCTTCGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAGCCTGTGTGGTGTGGTCTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CAA 90 bp GCAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGACAGCATACCACAGCAGACCCTaGAACACTGTCCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: ATRNSWPAAGQGYPAWTAYHSRP*NTVHLS
Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGTA...TGCTGTCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
3UTR-3UTR CAA 90 bp CTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: LPVLITGLQGDVVEGVHVRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...TACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp GGCTGCGCCTCCCAGGAGCCCCTCATACAGAATGATCAGGAAGACGAGGTAGATAGACGAGGTAGATGCTaGGCAGAAAGCCGAACCACA +
Preference number: 3 (lower is better)
Translates to: GCASQEPLIQNDQEDEVDRRGRC*AESRTT
Trigger: TGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT...ATCTACCTCGTCTTCCTGATCATTCTGTATGAGGGGCTCCTGGGAGGCGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp AGACGAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACAAGGCTTGAGAATCGCTaGAATCTGGGAGGCAGGGGT +
Preference number: 3 (lower is better)
Translates to: RRGRCLAESRTTRLPAGTRLENR*NLGGRG
Trigger: ACCCCTGCCTCCCAGATTCAAGCGATTCTCAAGCCT...TGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000569030.5
ENST00000637184.1
3UTR-3UTR CAA 90 bp AAGGTGACCTCCCCAAGGCCTGATGAGATGCTAGCGAAGACCACACCACACAGGTTTCCCGATGTCCTCTaGTGGCTAAGGATGTCGTGG +
Preference number: 3 (lower is better)
Translates to: KVTSPRPDEMLAKTTPHRFPDVL*WLRMSW
Trigger: CCACGACATCCTTAGCCACAAGAGGACATCGGGAAA...CCTGTGTGGTGTGGTCTTCGCTAGCATCTCATCAGGCCTTGGGGAGGTCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CAA 90 bp CAGCAGGTGAAGGCCAAGAGGAGCCAACAATTTGATGACGAGTGTGGGGAGGATAATCGTGATGAGCTGTaGTGGGGGATCGGCGTTGGG +
Preference number: 3 (lower is better)
Translates to: QQVKAKRSQQFDDECGEDNRDEL*WGIGVG
Trigger: CCCAACGCCGATCCCCCACAACAGCTCATCACGATT...ATCCTCCCCACACTCGTCATCAAATTGTTGGCTCCTCTTGGCCTTCACCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CAA 90 bp CATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTTACCACAGCAGACCCTaGAACACTGTCCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: HCKLPVLITGLQGDVVEGYHSRP*NTVHLS
Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGTA...ACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR-3UTR CAA 90 bp AGGCCAAGAGGAGCCAACAATTTGATGACGAGTGTGGGGAGGATGTCCGCCAGGAGACAGGAGAATAGCTaGAACCTTGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: RPRGANNLMTSVGRMSARRQENS*NLGGGG
Trigger: ACCTCCACCTCCAAGGTTCAAGCTATTCTCCTGTCT...CCTGGCGGACATCCTCCCCACACTCGTCATCAAATTGTTGGCTCCTCTTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637985.1
3UTR-3UTR CAA 90 bp CATCTGGTACCAGCGGTATTGCTGAGCGTGACTCAGGGAAGTGTTCCAGAAAAACTGGTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: HLVPAVLLSVTQGSVPEKLVPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAG...TTTTTCTGGAACACTTCCCTGAGTCACGCTCAGCAATACCGCTGGTACCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
3UTR CCA 72 bp CTTGCCCAAGGTAATAGAGCTAGTGAATGGCAGGGTTaGCACCTGAAAGTCAGTTCCTTCTGCCCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: LAQGNRASEWQG*HLKVSSFCPQS
Trigger: GCTTTGGGGGCAGAAGGAACTGACTTTCAGGTGCCAACCCTGCCATTCACTAGCTCTATTACCTTGGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR TCA 72 bp AAGGTAATAGAGCTAGTGAATGGCAGGGTTGGCACCTaGAAGTCAGTTCCTTCTGCCCCCAAAGCCCATGCT +
Preference number: 3 (lower is better)
Translates to: KVIELVNGRVGT*KSVPSAPKAHA
Trigger: AGCATGGGCTTTGGGGGCAGAAGGAACTGACTTTCAGGTGCCAACCCTGCCATTCACTAGCTCTATTACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR CCA 72 bp CTCATACAGAATGATCAGGAAGACGAGGTAGATGCTTaGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAA +
Preference number: 3 (lower is better)
Translates to: LIQNDQEDEVDA*QKAEPHVCQQE
Trigger: TTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTCTTCCTGATCATTCTGTATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
3UTR-3UTR CAA 90 bp AAAAAGTCCCTGGTTAATGAAATACTCGGCAAAGTAAACTACGACCAAGGGAACCTCTTACCAGCGGTATaGCTGAGCGTGACTCAGGGA +
Preference number: 3 (lower is better)
Translates to: KKSLVNEILGKVNYDQGNLLPAV*LSVTQG
Trigger: TCCCTGAGTCACGCTCAGCAATACCGCTGGTAAGAG...GTTCCCTTGGTCGTAGTTTACTTTGCCGAGTATTTCATTAACCAGGGACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
3UTR-3UTR CAA 90 bp AAAAAGTCCCTGGTTAATGAAATACTCGGCAAAGTAAACTACGACCAAGGGAACTACCACAGCAGACCCTaGAACACTGTCCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: KKSLVNEILGKVNYDQGNYHSRP*NTVHLS
Trigger: GGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGTA...GTTCCCTTGGTCGTAGTTTACTTTGCCGAGTATTTCATTAACCAGGGACTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
3UTR TCA 72 bp TGCCAACCCTGCCATTCATTAGCTCTATCTACTCACTaGTGGAACAGTGAATACATAGATTTGATGGGGGCT +
Preference number: 3 (lower is better)
Translates to: CQPCHSLALSTH*WNSEYIDLMGA
Trigger: AGCCCCCATCAAATCTATGTATTCACTGTTCCATCAGTGAGTAGATAGAGCTAATGAATGGCAGGGTTGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR GCA 72 bp CATAGAACAGGGTGGCGCATACTCAGGATGATTCACTaGACAATTCTTTCCACTTCTCTGAAAACTTTCATG +
Preference number: 3 (lower is better)
Translates to: HRTGWRILRMIH*TILSTSLKTFM
Trigger: CATGAAAGTTTTCAGAGAAGTGGAAAGAATTGTGCAGTGAATCATCCTGAGTATGCGCCACCCTGTTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569430.7
3UTR TCA 72 bp ATGATTGTTTACAGATTGTCCCAAACAATGAATGCATaGATGAATGAATACGTAAGGCCTCAAAGATGGCAG +
Preference number: 3 (lower is better)
Translates to: MIVYRLSQTMNA*MNEYVRPQRWQ
Trigger: CTGCCATCTTTGAGGCCTTACGTATTCATTCATTCATGCATTCATTGTTTGGGACAATCTGTAAACAATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR GCA 90 bp GCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: AWLRLRGLGSYEGLPGCAAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...AGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCGGAGGCGCAGGCGGCTaGGGAACTGGGGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFGGAGG*GTGGGG
Trigger: GCCACCACCCCCAGTTCCTCAGCCGCCTGCGCCTCC...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR GCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCTCCCACGGGAGGGATaGGGGTCTGCGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVLPREG*GSATGD
Trigger: GTCACCTGTCGCAGACCCTCATCCCTCCCGTGGGAG...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR TCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PPARETRLQPFPTPRPAGDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SQEPRQGDPQCVRDAGGRAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCTCCCACGGGAGGGATaGGGGTCTGCGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGLPREG*GSATGD
Trigger: GTCACCTGTCGCAGACCCTCATCCCTCCCGTGGGAG...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR TCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: ETRLQPFPTPRPAGKAGSRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...GCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: QESWQRKSCRGKARSPDRRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp AAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KASALPYSQTCREGWEHSDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...ACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DAGGRHCKLPVLITGLQGDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp AAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: KASALPYSQTCREGWEHSGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...ACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PYSQTCREGWEHSSWRVSGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...AGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ESWQRKSCRGKARSPDREGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GRGSHAEAKPGAPTGRSPGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...TGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPARETRLQPFPTPRPAGGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp GAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPRQGDPQCVRDAGGRHCGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...GCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTCTCTGCTTCTGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: DSGASVLMRGCRAALSASGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...AGAAGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGCTCCCACGGGAGGGATaGGGGTCTGCGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRLPREG*GSATGD
Trigger: GTCACCTGTCGCAGACCCTCATCCCTCCCGTGGGAG...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR TCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LQGKQGFSPSLLPDLPGRRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp CAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGKQGFSPSLLPDLPGRLDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VAAIANSRCSSLVSRAMLDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PARETRLQPFPTPRPAGKGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp CAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QGKQGFSPSLLPDLPGRLGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LQGKQGFSPSLLPDLPGRGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp CCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PQCVRDAGGRHCKLPVLIGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETRLQPFPTPRPAGKAGSGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...GCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLQGKQGFSPSLLPDLPGGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...TCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ESWQRKSCRGKARSPDREGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEEVMQRQSQEPRQGDPQGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: AEAKPGAPTGRSPVCQRCGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...GCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCAGCACAAATCCCACTaGCGAGAACCCGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCQHKSH*REPGGA
Trigger: GGCTCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357806.11
ENST00000395653.9
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTCTCGGCTTCGGAGCGTaGAAAAGGGAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPLGFGA*KREGLE
Trigger: CTCCAGCCCCTCCCTTTTTCACGCTCCGAAGCCGAG...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360019.8
ENST00000569430.7
ENST00000637107.1
CDS-3UTR GCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTGGATCAACGCCCGATTaGCGGTCCCAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCGSTPD*RSQLRL
Trigger: AAGCCGGAGCTGGGACCGGCAATCGGGCGTTGATCC...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR GCA 90 bp CCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: PARETRLQPFPTPRPAGKAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR GCA 90 bp CCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: PDREIPSVSEMQVAAIANAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...GTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp AGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: RGKARSPDREIPSVSEMQAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp AGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: REIPSVSEMQVAAIANSRAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...CCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp CAAATCGTGATGAGCTGTTGTGGGGGATCGGCGTTGGGCCTGGGTCCACATGGCGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: QIVMSCCGGSALGLGPHGAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...GCCATGTGGACCCAGGCCCAACGCCGATCCCCCACAACAGCTCATCACGATTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637985.1
CDS-3UTR GCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PPARETRLQPFPTPRPAGTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...CCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
CDS-3UTR GCA 90 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQGDVVEGVHVGCASQEPTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...GGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: EPRQGDPQCVRDAGGRHCPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...GCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GAPTGRSPVCQRCRWPPLPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...CAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTGGAGACAGCCAAGGCTaGCAGGTGCCAGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCGDSQG*QVPGAK
Trigger: CTTGGCTCCTGGCACCTGGCAGCCTTGGCTGTCTCC...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR CCA 90 bp GCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTCCCGATGTCCTCTTGTaGCTAAGGATGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: AWLRLRGLGSYEGLPGCAPDVLL*LRMSWA
Trigger: CGCCCACGACATCCTTAGCCACAAGAGGACATCGGG...AGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR CCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: DAGGRHCKLPVLITGLQGAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp CCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLQGKQGFSPSLLPDLPGAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...TCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR CCA 90 bp AGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSPDREIPSVSEMQVAAIAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...AATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp AACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NKASALPYSQTCREGWEHAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGAAGCCCAGGAGGACCTaGAGGGCCTTAGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGKPRRT*RALEAA
Trigger: GGCTGCCTCTAAGGCCCTCCAGGTCCTCCTGGGCTT...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR TCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACACTCCCACGGGAGGGATaGGGGTCTGCGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTLPREG*GSATGD
Trigger: GTCACCTGTCGCAGACCCTCATCCCTCCCGTGGGAG...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR TCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGCTCCCACGGGAGGGATaGGGGTCTGCGACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWLPREG*GSATGD
Trigger: GTCACCTGTCGCAGACCCTCATCCCTCCCGTGGGAG...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR TCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTTCCAATGCGCGCCCTaGTGGTCCAACAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAFQCAP*WSNRGS
Trigger: GCTCCCTCTGTTGGACCATCAGGGCGCGCATTGGAA...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp GACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTCTCTGCTTCTTTCCAATGCGCGCCCTaGTGGTCCAACAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: DSGASVLMRGCRAALSASFQCAP*WSNRGS
Trigger: GCTCCCTCTGTTGGACCATCAGGGCGCGCATTGGAA...AGAAGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: LQGDVVEGVHVGCASQEPSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...GGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCGAACCACACGTCTGCCAGCAGGAACACCAGGTTGAGGCACTGCAGCAGGGCCAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: PNHTSASRNTRLRHCSRASSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...GGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: VCQRCRWPPLQTPGAHHWRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PVCQRCRWPPLQTPGAHHRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...GTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp AGCGGGAGGCAAAGACGCCAGCCTGGTACAGCATCTGGTACCAGCGGTATTGCTGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SGRQRRQPGTASGTSGIAGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...AGCAATACCGCTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGCCTCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp ATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: IRRAGRGSHAEAKPGAPTGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...TGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PVLITGLQGDVVEGVHVGGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...GCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCGAGTATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PSIRRAGRGSHAEAKPGAGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...GGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATACTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATAGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GDVVEGVHVGCASQEPLIGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...TATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: EVMQRQSQEPRQGDPQCVGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...GACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGGTTTGTCGGATCACGTaGCAGCACCCGCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGVCRIT*QHPRVP
Trigger: GGGAACACGCGGGTGCTGTCACGTGATCCGACAAAC...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360019.8
ENST00000569430.7
ENST00000637107.1
CDS-3UTR TCA 90 bp GAGCTGGAGCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGCTCCCACGGGAGGGATaGGGGTCTTTAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELEPGFDSGASVLMRGCRLPREG*GSLRAA
Trigger: TGCTGCTCTTAAAGACCCTCATCCCTCCCGTGGGAG...CCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000635861.1
ENST00000637107.1
ENST00000637871.1
CDS-3UTR GCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCGGATCAACGCCCGATTaGCGGTCCCAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFGSTPD*RSQLRL
Trigger: AAGCCGGAGCTGGGACCGGCAATCGGGCGTTGATCC...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR GCA 90 bp GTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: VSEMQVAAIANSRCSSLVAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...GACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp ATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: ITGLQGDVVEGVHVGCASAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...GGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp CATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCGCGCCGCCGCGAGCCTaGACAGCCTCCCATCGCATC +
Preference number: 4 (lower is better)
Translates to: HHWSPGRCCGRCSRRLRLAPPRA*TASHRI
Trigger: GATGCGATGGGAGGCTGTGCAGGCTCGCGGCGGCGC...GAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp TCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTCTCTGCTTCTTCTCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGASVLMRGCRAALSASSPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...AGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR GCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGRCCGRCSRRLRLPGAPEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...AGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PYSQTCREGWEHSSWRVSTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...AGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KASALPYSQTCREGWEHSGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...ACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PYSQTCREGWEHSSWRVSGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...AGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AGRGSHAEAKPGAPTGRSGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...GGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACACCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: NKASALPYSQTCREGWEHPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: ETRLQPFPTPRPAGKAGSPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...GCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCGCCCTCCCAGCCCACTaGCCTCGCTCCTCTTACCAG +
Preference number: 4 (lower is better)
Translates to: QSQEPRQGDPQCVRDAGGALPAH*PRSSYQ
Trigger: CTGGTAAGAGGAGCGAGGGCAGTGGGCTGGGAGGGC...GCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635861.1
ENST00000637699.1
CDS-3UTR CCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PQCVRDAGGRHCKLPVLIAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp AACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: NKASALPYSQTCREGWEHGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: APTGRSPVCQRCRWPPLQGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...TTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: AEEVMQRQSQEPRQGDPQGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...CTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACACCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: ETRLQPFPTPRPAGKAGSPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: KARSPDREIPSVSEMQVAPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...GGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAACCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: APTGRSPVCQRCRWPPLQPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...TTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GCCTGGCTTCGACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTGCAAAGACGCCAGCCTaGTACAGCATCTGGTACCAG +
Preference number: 4 (lower is better)
Translates to: AWLRLRGLGSYEGLPGCAAKTPA*YSIWYQ
Trigger: CTGGTACCAGATGCTGTACCAGGCTGGCGTCTTTGC...AGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTCGAAGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000566057.5
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR CCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTTTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTTTCATGGAGGGTCTCTaGGGTGGGCCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCFMEGL*GGPGCL
Trigger: CAGACACCCAGGCCCACCCCAGAGACCCTCCATGAA...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTTGGGAGCACAGTTCATaGAGGGTCTCTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCWEHSS*RVSGVG
Trigger: GCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCA...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWATCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: DLPGRLGAQFMEGLWGGPTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...AGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTCTCTGCTTCTACCTGCCGGGAAGGCTaGGAGCACAGTTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: DSGASVLMRGCRAALSASTCREG*EHSSWR
Trigger: CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGT...AGAAGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000637107.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGGGGCCTGGGTCCACATaGCTCTGGTTTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGGPGST*LWFPDV
Trigger: GACATCGGGAAACCAGAGCCATGTGGACCCAGGCCC...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGGATCGGCGTTGGGCCTaGGTCCACATGGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGDRRWA*VHMALV
Trigger: AACCAGAGCCATGTGGACCCAGGCCCAACGCCGATC...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: DAGGRHCKLPVLITGLQGVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...GCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000568422.6
ENST00000569030.5
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: GLQGDVVEGVHVGCASQEVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...CTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000568422.6
ENST00000569030.5
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCRDELL*GIGVGP
Trigger: AGGCCCAACGCCGATCCCCCACAACAGCTCATCACG...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGCTGGGGCTGGGGAGATaGCAGCTCCCATGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWLGLGR*QLPWVP
Trigger: TGGGACCCATGGGAGCTGCCATCTCCCCAGCCCCAG...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR CCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCGGTCCTGGGGAAGGTTaGCTTGTCTTGGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAGPGEG*LVLVGG
Trigger: CCCACCCACCAAGACAAGCCAACCTTCCCCAGGACC...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR TCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCCAATGCGCGCCCTaGTGGTCCAACAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQFQCAP*WSNRGS
Trigger: GCTCCCTCTGTTGGACCATCAGGGCGCGCATTGGAA...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp CTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LQGDVVEGVHVGCASQEPQHKSH*REPGGC
Trigger: ACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...GGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000637184.1
ENST00000637699.1
CDS-3UTR TCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCCAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFQHKSH*REPGGC
Trigger: ACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637184.1
CDS-3UTR TCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp AACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: NKASALPYSQTCREGWEHSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp ATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: MQVAAIANSRCSSLVSRASSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGACAGCAGGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QQEIAGQQQGRDTQHGQQDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...CTGCTGTCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000567495.6
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GCAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGACAGCAGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ATRNSWPAAGQGYPAWTADSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...TGCTGTCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000567495.6
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GACGAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACGACAGCAGGGTCTGCTaGGGGGAGAGGCCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DEVDAWQKAEPHVCQQEHDSRVC*GERPAW
Trigger: CCAGGCCGGCCTCTCCCCTCAGCAGACCCTGCTGTC...GTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GAGGTAGATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGGGGCCTCGGTTCTTATaGGGGGCTGCCGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EVDAWQKAEPHVCQQEHQGPRFL*GAAGLR
Trigger: GCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCC...CTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCATCTACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGACCACAGCAGACCCTTaGACACTGTCCACCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVTTADP*TLSTFP
Trigger: GGGAAAGGTGGACAGTGTTCAAGGGTCTGCTGTGGT...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp TGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: WPPLQTPGAHHWSPGRCCGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...ACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCAGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSVSEMQVAAIANSRCSSGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...TGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp ATCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: IRRAGRGSHAEAKPGAPTGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...TGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000628023.3
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp AAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KASALPYSQTCREGWEHSAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...ACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGGCAGGAACACCAGGTTaGGGCACTGCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWAGTPG*GTAAGP
Trigger: TGGCCCTGCTGCAGTGCCTCAACCTGGTGTTCCTGC...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGCAGCACAAATCCCACTaGCGAGAACCCGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWQHKSH*REPGGA
Trigger: GGCTCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357806.11
ENST00000395653.9
ENST00000637107.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGACTCGGCTTCGGAGCGTaGAAAAGGGAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLQGKQGFSPSLLPDLPGLGFGA*KREGLE
Trigger: CTCCAGCCCCTCCCTTTTTCACGCTCCGAAGCCGAG...TCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360019.8
ENST00000569430.7
ENST00000637107.1
CDS-3UTR TCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGGTTTGTCGGATCACGTaGCAGCACCCGCGTGTTCCC +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQVCRIT*QHPRVP
Trigger: GGGAACACGCGGGTGCTGTCACGTGATCCGACAAAC...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360019.8
ENST00000569430.7
ENST00000637107.1
CDS-3UTR TCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGAGGCAGAGGTTGCAGTaGGCTGAGACTGCGCCACTA +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGRQRLQ*AETAPL
Trigger: TAGTGGCGCAGTCTCAGCTCACTGCAACCTCTGCCT...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR GCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTGGATCAACGCCCGATTaGCGGTCCCAGCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVGSTPD*RSQLRL
Trigger: AAGCCGGAGCTGGGACCGGCAATCGGGCGTTGATCC...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000637578.1
CDS-3UTR GCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QESWQRKSCRGKARSPDRPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...CCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGCCGGGCTGCGCTCTCTaGTTCTTCTTCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWPGCAL*FFFPSR
Trigger: CCTGGAGGGGAAGAAGAAGCAGAGAGCGCAGCCCGG...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ETRLQPFPTPRPAGKAGSEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...GCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTGAGGGGCTGCCGGGCTaGGCTCTCTGCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KASALPYSQTCREGWEHSEGLPG*ALCFFF
Trigger: GAAGAAGAAGCAGAGAGCGCAGCCCGGCAGCCCCTC...ACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTTCTTATGAGGGGCTaGCGGGCTGCGCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRVLMRG*RAALSA
Trigger: AGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAAC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp AGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RQSQEPRQGDPQCVRDAGTRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...ACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp CCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACCAGGTTGAGGCACTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQCVRDAGGRHCKLPVLITRLRH*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGTGCCTCAACCTGGT...GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp CCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PARETRLQPFPTPRPAGKGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR GCA 90 bp CAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QGKQGFSPSLLPDLPGRLGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGAGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: HAEAKPGAPTGRSPVCQRGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...TCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp GAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: EIPSVSEMQVAAIANSRCGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...GCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp TCAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGTGTTCACGTAGGCTaGGCCTCCCAGGAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SGELAEEVMQRQSQEPRQGVHVG*ASQEPL
Trigger: GAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACC...CTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CCCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: PPARETRLQPFPTPRPAGAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...CCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR GCA 90 bp GAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCGCAGGTGGCCGCCATTaGAAACTCCCGGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: EPRQGDPQCVRDAGGRHCAGGRH*KLPVLI
Trigger: GATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGC...GCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR GCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCTGACCTGTCCCTCTaGCCACAGGTGAATGTGACC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVSDLSL*PQVNVT
Trigger: GGTCACATTCACCTGTGGGCAGAGGGACAGGTCAGA...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp CAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGCCCTACTCCCAGACCTaGCGGGAAGGCTGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: QGKQGFSPSLLPDLPGRLPYSQT*REGWEH
Trigger: GTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGG...CAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR GCA 90 bp ACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAACCCATTTCCCGGGCTaGAGTGGGGGCTACTGTGGG +
Preference number: 4 (lower is better)
Translates to: TRLQPFPTPRPAGKAGSTTHFPG*SGGYCG
Trigger: CCCACAGTAGCCCCCACTGCAGCCCGGGAAATGGGT...TGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR GCA 90 bp CAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTCCCCTCAGGTGGGCTaGGAGCCAGAGGTGGTCGTT +
Preference number: 4 (lower is better)
Translates to: QVAAIANSRCSSLVSRAMSPQVG*EPEVVV
Trigger: AACGACCACCTCTGGCTCGCAGCCCACCTGAGGGGA...CATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637107.1
CDS-3UTR GCA 90 bp GAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCGAGCGAGACTCCATCTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVMQRQSQEPRQGDPQCVERDSI*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGATGGAGTCTCGCTC...GACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569030.5
ENST00000637184.1
CDS-3UTR GCA 90 bp GTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGAGCGAGACTCCATCTaGAGCAGGGCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VMQRQSQEPRQGDPQCVRERDSI*SRARAQ
Trigger: CTGGGCCCTGGCCCTGCTGCAGATGGAGTCTCGCTC...TCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000569030.5
ENST00000637184.1
CDS-3UTR CCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGCTAAGGATGTCGTaGGCGGCACTCAGCATCACC +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAWLRMS*AALSIT
Trigger: GGTGATGCTGAGTGCCGCCCACGACATCCTTAGCCA...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCCCCGATGTCCTCTTGTaGCTAAGGATGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RPAGKAGSTVHGGSLGWAPDVLL*LRMSWA
Trigger: CGCCCACGACATCCTTAGCCACAAGAGGACATCGGG...GGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GACTCCGGGGCCTCGGTTCTTATGAGGGGCTGCCGGGCTGCGCTCTCTGCTTCTCCCGATGTCCTCTTGTaGCTAAGGATGTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: DSGASVLMRGCRAALSASPDVLL*LRMSWA
Trigger: CGCCCACGACATCCTTAGCCACAAGAGGACATCGGG...AGAAGCAGAGAGCGCAGCCCGGCAGCCCCTCATAAGAACCGAGGCCCCGGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR CCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGGCCAGGAGCACAGCATaGCTCTGGTTTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGARSTA*LWFPDV
Trigger: GACATCGGGAAACCAGAGCCATGCTGTGCTCCTGGC...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333496.14
ENST00000360019.8
CDS-3UTR CCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCCAGGGATACCCAGCATaGACAGCAGGGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVQGYPA*TAGSAE
Trigger: CTCAGCAGACCCTGCTGTCCATGCTGGGTATCCCTG...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: SALPYSQTCREGWEHSSWSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...CCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: RLQPFPTPRPAGKAGSTVSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...AACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: SPGRCCGRCSRRLRLPGASPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...GGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp CAGGAGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGTCCCCTCCAGGGTCCTaGGCCTCAGGAGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: QESWQRKSCRGKARSPDRSPPGS*ASGDVS
Trigger: GCTCACATCTCCTGAGGCCCAGGACCCTGGAGGGGA...CCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp CCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PVCQRCRWPPLQTPGAHHAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp ACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCGCCATTGCAAACTCCCGCTGGAGCTGGAGCCTaGCTTCGACTCCGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TGRSPVCQRCRWPPLQTPAGAGA*LRLRGL
Trigger: GAGGCCCCGGAGTCGAAGCCAGGCTCCAGCTCCAGC...GGGAGTTTGCAATGGCGGCCACCTGCATCTCTGACACACTGGGGATCTCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp TGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: CKGNKASALPYSQTCREGGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...GCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp AGAGCTGGCAGAGGAAGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGAGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: RAGRGSHAEAKPGAPTGRGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...TCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGGGAGAGGCTGGAGCTaGAGCCTGGCTTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: GRHCKLPVLITGLQGDVVGRGWS*SLASTP
Trigger: CGGAGTCGAAGCCAGGCTCCAGCTCCAGCCTCTCCC...CACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp AGTCATGCAGAGGCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: SHAEAKPGAPTGRSPVCQPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...CTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGCCTCTGCATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGCCCGAAGGGAGAGGCTaGAGCTGGAGCCTGGCTTCG +
Preference number: 4 (lower is better)
Translates to: GRHCKLPVLITGLQGDVVPEGRG*SWSLAS
Trigger: CGAAGCCAGGCTCCAGCTCCAGCCTCTCCCTTCGGG...CACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGAAGAAACTCCCCAAGTaGGAGACAATGGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AGKAGSTVHGGSLGWAWVKKLPK*ETMAGP
Trigger: GGGGCCAGCCATTGTCTCCCACTTGGGGAGTTTCTT...CACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR CCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGGGCCTGGGTCCACATaGCTCTGGTTTCCCGATGTC +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRGPGST*LWFPDV
Trigger: GACATCGGGAAACCAGAGCCATGTGGACCCAGGCCC...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCGATCGGCGTTGGGCCTaGGTCCACATGGCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFDRRWA*VHMALV
Trigger: AACCAGAGCCATGTGGACCCAGGCCCAACGCCGATC...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: CKGNKASALPYSQTCREGVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...GCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: LQGKQGFSPSLLPDLPGRVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...CCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR CCA 90 bp GCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGGTGGGGGATCGGCGTTaGGCCTGGGTCCACATGGCT +
Preference number: 4 (lower is better)
Translates to: AAIANSRCSSLVSRAMLWVGDRR*AWVHMA
Trigger: AGCCATGTGGACCCAGGCCCAACGCCGATCCCCCAC...CCACAACATCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000568422.6
ENST00000569030.5
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR CCA 90 bp GCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALPYSQTCREGWEHSSWRRDELL*GIGVGP
Trigger: AGGCCCAACGCCGATCCCCCACAACAGCTCATCACG...CCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp CAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QGFSPSLLPDLPGRLGAQRDELL*GIGVGP
Trigger: AGGCCCAACGCCGATCCCCCACAACAGCTCATCACG...CTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp GGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCCGTGATGAGCTGTTGTaGGGGATCGGCGTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GFSPSLLPDLPGRLGAQFRDELL*GIGVGP
Trigger: AGGCCCAACGCCGATCCCCCACAACAGCTCATCACG...GAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR CCA 90 bp TGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTATCCAAGGCAGGGTCTaGGGCTTGCCAAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: CREGWEHSSWRVSGVGLGIQGRV*GLPRQE
Trigger: CTCCTGTCTTGGCAAGCCCCAGACCCTGCCTTGGAT...ACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569430.7
CDS-3UTR CCA 90 bp GCAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCTCATTCCCCTCAGGTaGGCTGCGAGCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AKPGAPTGRSPVCQRCRWLIPLR*AASQRW
Trigger: CCACCTCTGGCTCGCAGCCCACCTGAGGGGAATGAG...CCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637107.1
CDS-3UTR TCA 90 bp CTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGTTCCAATGCGCGCCCTaGTGGTCCAACAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLPDLPGRLGAQFMEGLWFQCAP*WSNRGS
Trigger: GCTCCCTCTGTTGGACCATCAGGGCGCGCATTGGAA...CCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
CDS-3UTR TCA 90 bp TGCAGGTGGCCGCCATTGCAAACTCCCGGTGCTCATCACTGGTCTCCAGGGCGATTCCAATGCGCGCCCTaGTGGTCCAACAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: CRWPPLQTPGAHHWSPGRFQCAP*WSNRGS
Trigger: GCTCCCTCTGTTGGACCATCAGGGCGCGCATTGGAA...TCGCCCTGGAGACCAGTGATGAGCACCGGGAGTTTGCAATGGCGGCCACCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CCCCTGCAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGACAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PLQGKQGFSPSLLPDLPGQHKSH*REPGGC
Trigger: ACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...TCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTGCAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637184.1
CDS-3UTR TCA 90 bp AAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTCAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KASALPYSQTCREGWEHSQHKSH*REPGGC
Trigger: ACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...ACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637184.1
CDS-3UTR TCA 90 bp TACTCCCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGCAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: YSQTCREGWEHSSWRVSGQHKSH*REPGGC
Trigger: ACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...CCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGGGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637184.1
CDS-3UTR TCA 90 bp CAAAGCCAGGAGCCCCGACAGGGAGATCCCCAGTGTGTCAGAGATGCAGGTGGCCAGCACAAATCCCACTaGCGAGAACCCGGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QSQEPRQGDPQCVRDAGGQHKSH*REPGGC
Trigger: ACAGCCCCCGGGTTCTCGTCAGTGGGATTTGTGCTG...GCCACCTGCATCTCTGACACACTGGGGATCTCCCTGTCGGGGCTCCTGGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000637184.1
ENST00000637699.1
CDS-3UTR TCA 90 bp CGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCCTGGTCCCCACAGAATaGGAAAAGGCAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: REGWEHSSWRVSGVGLGVLVPTE*EKATRT
Trigger: CGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAG...GACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCCTGGGTGTCTGGTCCCCACAGAATaGGAAAAGGCAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: PGRLGAQFMEGLWGGPGCLVPTE*EKATRT
Trigger: CGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAG...ACACCCAGGCCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CCAGACCTGCCGGGAAGGCTGGGAGCACAGTTCATGGAGGGTCTCTGGGGTGGGCTGGTCCCCACAGAATaGGAAAAGGCAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: PDLPGRLGAQFMEGLWGGLVPTE*EKATRT
Trigger: CGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAG...CCCACCCCAGAGACCCTCCATGAACTGTGCTCCCAGCCTTCCCGGCAGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000333496.14
ENST00000357806.11
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000395653.9
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp CAAGGGAAACAAGGCTTCAGCCCTTCCCTACTCCCAGACCTGCCGGGAAGGCTGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: QGKQGFSPSLLPDLPGRLSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CAGCCTTCCCGGCAGGTCTGGGAGTAGGGAAGGGCTGAAGCCTTGTTTCCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000333496.14
ENST00000357857.14
ENST00000359984.12
ENST00000360019.8
ENST00000569430.7
ENST00000636147.2
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
CDS-3UTR TCA 90 bp ATCGGCGTTGGGCCTGGGTCCACATGGCTCTGGTTTCCCGATGTCCTCTTGTGGAGCTCCCCCAGTCCCTaGGGACCACCAGGAGATCAC +
Preference number: 4 (lower is better)
Translates to: IGVGPGSTWLWFPDVLLWSSPSP*GPPGDH
Trigger: GTGATCTCCTGGTGGTCCTCAGGGACTGGGGGAGCT...CCACAAGAGGACATCGGGAAACCAGAGCCATGTGGACCCAGGCCCAACGCCGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637985.1
CDS-3UTR TCA 90 bp TGTGAGCAACAAGAAATAGCTGGCCAGCAGCAGGGCAGGGATACCCAGCATGGAAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: CEQQEIAGQQQGRDTQHGRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...TCCATGCTGGGTATCCCTGCCCTGCTGCTGGCCAGCTATTTCTTGTTGCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000567495.6
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637578.1
ENST00000637871.1
CDS-3UTR TCA 90 bp CACACAGGCTGGTCCCCACAGAATGAGAAAAGGCAACCAGGACGAAGCTTCCAGAGAGGCCGGCCTGGGTaGGGCCCAGGTAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HTGWSPQNEKRQPGRSFQRGRPG*GPGRTG
Trigger: CCCTGTCCTACCTGGGCCTCACCCAGGCCGGCCTCT...CTGGAAGCTTCGTCCTGGTTGCCTTTTCTCATTCTGTGGGGACCAGCCTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637985.1
CDS-3UTR TCA 90 bp GGTGCTCATCACTGGTCTCCAGGGCGATGTTGTGGAAGGTGTTCACGTAGGCTGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAHHWSPGRCCGRCSRRLGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CAGCCTACGTGAACACCTTCCACAACATCGCCCTGGAGACCAGTGATGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp TGTTGTGGAAGGTGTTCACGTAGGCTGCGCCTCCCAGGAGCCCCTCATACAGAAGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CCGRCSRRLRLPGAPHTEGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...TTCTGTATGAGGGGCTCCTGGGAGGCGCAGCCTACGTGAACACCTTCCACAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1
ENST00000637578.1
ENST00000637699.1
ENST00000637871.1
CDS-3UTR TCA 90 bp ATGCTTGGCAGAAAGCCGAACCACACGTCTGCCAGCAGGAACACCAGGTTGAGGGGGCCAGGGCCCAGGTaGAACGGATGCGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: MLGRKPNHTSASRNTRLRGPGPR*NGCDSS
Trigger: GCTGCTGTCGCATCCGTTTCACCTGGGCCCTGGCCC...CCTCAACCTGGTGTTCCTGCTGGCAGACGTGTGGTTCGGCTTTCTGCCAAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000565140.5
ENST00000566057.5
ENST00000568422.6
ENST00000569030.5
ENST00000628023.3
ENST00000635861.1
ENST00000636172.1
ENST00000637107.1
ENST00000637184.1