RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLMN (Homo sapiens)

Ensembl gene IDs: ENSG00000165959

Ensembl transcript IDs: ENST00000298912.9, ENST00000553733.1, ENST00000555336.6, ENST00000555615.1, ENST00000556416.1, ENST00000556441.1, ENST00000556454.1, ENST00000557215.5, ENST00000557696.5

Found 793 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTaGCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTGGCTGG +
Preference number: 1 (lower is better)
Translates to: GITRQTSGSAPPGVK*QATLMGKWRPVLGW
Trigger: CCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR CCA 90 bp ACGCTCCTCCAGGTTGGGGGAAGATGGCATTACAAGGCAAACCAGTaGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGCTCATGGG +
Preference number: 1 (lower is better)
Translates to: TLLQVGGRWHYKANQ*VSSTRCEVPGHAHG
Trigger: CCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR GCA 90 bp ACTATGCTGAACCTCAGAAATGGAGACGCCCATGTTCTGGGTGGCTaGCCGAGGGGCAGCAAGAGTGTCCTGCTTCTGAGCCTTGGTGGG +
Preference number: 1 (lower is better)
Translates to: TMLNLRNGDAHVLGG*PRGSKSVLLLSLGG
Trigger: CCCACCAAGGCTCAGAAGCAGGACACTCTTGCTGCCCCTCGGGCAGCCACCCAGAACATGGGCGTCTCCATTTCTGAGGTTCAGCATAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp CAGTCTCATTTCCTGGCTGAGAAGGTCCCGAGATACCAGGCTGACTaGAAGCTCCCACACAGCCCATTTCTGGGACCTGAGGGCGCAAGG +
Preference number: 1 (lower is better)
Translates to: QSHFLAEKVPRYQAD*KLPHSPFLGPEGAR
Trigger: CCTTGCGCCCTCAGGTCCCAGAAATGGGCTGTGTGGGAGCTTCCAGTCAGCCTGGTATCTCGGGACCTTCTCAGCCAGGAAATGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp CTGGCTGCTCGGATTTCCCCTAGTGAATGCAACCAGTTACCGGACTaGGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCCACG +
Preference number: 1 (lower is better)
Translates to: LAARISPSECNQLPD*DRCMDPSTFSQTPT
Trigger: CGTGGGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAATCCGAGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GGATGTGCTTACACAGAGCTGGCTGCTCGGATTTCCCCTAGTGAATaGAACCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACC +
Preference number: 1 (lower is better)
Translates to: GCAYTELAARISPSE*NQLPDCDRCMDPST
Trigger: GGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAATCCGAGCAGCCAGCTCTGTGTAAGCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp AAGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTaGAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTG +
Preference number: 1 (lower is better)
Translates to: KMALQGKPVGQLHQV*SARPRSWGSGGLFL
Trigger: CAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR GCA 90 bp CGGATTTCCCCTAGTGAATGCAACCAGTTACCGGACTGCGACAGGTaGATGGACCCCAGCACCTTCTCTCAAACACCCACGCTTGGAGGA +
Preference number: 1 (lower is better)
Translates to: RISPSECNQLPDCDR*MDPSTFSQTPTLGG
Trigger: TCCTCCAAGCGTGGGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp CAGGTCCTGGACCTTGTCATTAGGGCAGCCCCCTCATCAGTTGGATaGGACAGAACAACCTGCTATGTGGTGATGGTTCCAGATGGCAGC +
Preference number: 1 (lower is better)
Translates to: QVLDLVIRAAPSSVG*DRTTCYVVMVPDGS
Trigger: GCTGCCATCTGGAACCATCACCACATAGCAGGTTGTTCTGTCCCATCCAACTGATGAGGGGGCTGCCCTAATGACAAGGTCCAGGACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GTATTCGTGCAGCCTGAACTGAAGCACACTGACGCTCCTCCAGGTTaGGGGAAGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCAC +
Preference number: 1 (lower is better)
Translates to: VFVQPELKHTDAPPG*GKMALQGKPVGQLH
Trigger: GTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTTCAGTTCAGGCTGCACGAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR TCA 90 bp TTTCTCAGGACATTGGTGTGCCCAGTGGAAGTTTCCTACAAGGGGTaGCAGCTCTGGACAGGGCATCAGGTGCCTGTGTGCTCACTGCAA +
Preference number: 1 (lower is better)
Translates to: FLRTLVCPVEVSYKG*QLWTGHQVPVCSLQ
Trigger: TTGCAGTGAGCACACAGGCACCTGATGCCCTGTCCAGAGCTGTCACCCCTTGTAGGAAACTTCCACTGGGCACACCAATGTCCTGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp ATGCCTGATGAGAGCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATaGTTGTGTCTCATGTTTGGTTCTCCCACGCTGGCTGTTAGGGGA +
Preference number: 1 (lower is better)
Translates to: MPDESKAQDLWSSRG*LCLMFGSPTLAVRG
Trigger: TCCCCTAACAGCCAGCGTGGGAGAACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGCTCTCATCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp CCACAGCTAGGACGTGGGTTCTCCATACCCATACCAGTGTTGGCCTaGTTTGGACAATGTCAACTCTCCAGACAACAGGCACTCCCAGAG +
Preference number: 1 (lower is better)
Translates to: PQLGRGFSIPIPVLA*FGQCQLSRQQALPE
Trigger: CTCTGGGAGTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGGGTATGGAGAACCCACGTCCTAGCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp CTCAGCGGTCAGGACTCGGGCACACTGAGTATAGACCAGGGTCTCTaGATATGGTCCTACAGTTGTGCATTGCACAGAGGCACTTGGCTA +
Preference number: 1 (lower is better)
Translates to: LSGQDSGTLSIDQGL*IWSYSCALHRGTWL
Trigger: TAGCCAAGTGCCTCTGTGCAATGCACAACTGTAGGACCATATCCAGAGACCCTGGTCTATACTCAGTGTGCCCGAGTCCTGACCGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GCTCACGTGGAGCCCAAAGATACAGGTGTCTGCACACGATGGAAATaGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCAC +
Preference number: 1 (lower is better)
Translates to: AHVEPKDTGVCTRWK*NLCKVHAKSVHRAH
Trigger: GTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATCTTTGGGCTCCACGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTGCACACGATaGAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGG +
Preference number: 1 (lower is better)
Translates to: AGAHVEPKDTGVCTR*KWNLCKVHAKSVHR
Trigger: CCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATCTTTGGGCTCCACGTGAGCACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp CTTCTGAGCCTTGGTGGGAGAACATCTCCCCACAAAGGTCAGGTCTaGCCAGGAAGCCCCGACCACCTGATCATCAACTATGGCAAGATA +
Preference number: 1 (lower is better)
Translates to: LLSLGGRTSPHKGQV*PGSPDHLIINYGKI
Trigger: TATCTTGCCATAGTTGATGATCAGGTGGTCGGGGCTTCCTGGTCAGACCTGACCTTTGTGGGGAGATGTTCTCCCACCAAGGCTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp CACACAGTGGCTCTCAACACAGCTTTCACCTTCCTCCCTGGATTCTaGCATTCCTGGATGTGCTTACACAGAGCTGGCTGCTCGGATTTC +
Preference number: 1 (lower is better)
Translates to: HTVALNTAFTFLPGF*HSWMCLHRAGCSDF
Trigger: GAAATCCGAGCAGCCAGCTCTGTGTAAGCACATCCAGGAATGGCAGAATCCAGGGAGGAAGGTGAAAGCTGTGTTGAGAGCCACTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GCCTCTCTTCTTTCACAAACCTCCTGTGCTGGCCTGCTCCCGGAGTaGTGTCCAGAAAGCCTCTTCAAGAAACCCATTACAAGTGACCAC +
Preference number: 1 (lower is better)
Translates to: ASLLSQTSCAGLLPE*CPESLFKKPITSDH
Trigger: GTGGTCACTTGTAATGGGTTTCTTGAAGAGGCTTTCTGGACAGCACTCCGGGAGCAGGCCAGCACAGGAGGTTTGTGAAAGAAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp CTTCCTCCCTGGATTCTGCCATTCCTGGATGTGCTTACACAGAGCTaGCTGCTCGGATTTCCCCTAGTGAATGCAACCAGTTACCGGACT +
Preference number: 1 (lower is better)
Translates to: LPPWILPFLDVLTQS*LLGFPLVNATSYRT
Trigger: AGTCCGGTAACTGGTTGCATTCACTAGGGGAAATCCGAGCAGCCAGCTCTGTGTAAGCACATCCAGGAATGGCAGAATCCAGGGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GGTCAGGACTCGGGCACACTGAGTATAGACCAGGGTCTCTGGATATaGTCCTACAGTTGTGCATTGCACAGAGGCACTTGGCTAAAGAGG +
Preference number: 1 (lower is better)
Translates to: GQDSGTLSIDQGLWI*SYSCALHRGTWLKR
Trigger: CCTCTTTAGCCAAGTGCCTCTGTGCAATGCACAACTGTAGGACCATATCCAGAGACCCTGGTCTATACTCAGTGTGCCCGAGTCCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GCTAGGACGTGGGTTCTCCATACCCATACCAGTGTTGGCCTGCTTTaGACAATGTCAACTCTCCAGACAACAGGCACTCCCAGAGTTTCC +
Preference number: 1 (lower is better)
Translates to: ARTWVLHTHTSVGLL*TMSTLQTTGTPRVS
Trigger: GGAAACTCTGGGAGTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGGGTATGGAGAACCCACGTCCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp CCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATaGGCTGCTGACTGCTGTTTTCCAAGGAAATGCCTGATGAGAGCA +
Preference number: 1 (lower is better)
Translates to: PVQSPCKVCAPGSLP*AADCCFPRKCLMRA
Trigger: TGCTCTCATCAGGCATTTCCTTGGAAAACAGCAGTCAGCAGCTCATGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GAGCTGATTCCAGCCCAGCCACTCCTCATGGCTTTTATATGGCCCTaGTGGGCCCTGGCGATCTGGTTTGAAAATCATGGTTCTATCTCA +
Preference number: 1 (lower is better)
Translates to: ELIPAQPLLMAFIWP*WALAIWFENHGSIS
Trigger: TGAGATAGAACCATGATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAAAGCCATGAGGAGTGGCTGGGCTGGAATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GTGCTAGAGATGCCTCTCTTCTTTCACAAACCTCCTGTGCTGGCCTaGTCCCGGAGTGCTGTCCAGAAAGCCTCTTCAAGAAACCCATTA +
Preference number: 1 (lower is better)
Translates to: VLEMPLFFHKPPVLA*SRSAVQKASSRNPL
Trigger: TAATGGGTTTCTTGAAGAGGCTTTCTGGACAGCACTCCGGGAGCAGGCCAGCACAGGAGGTTTGTGAAAGAAGAGAGGCATCTCTAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp TGGGACAGAACAACCTGCTATGTGGTGATGGTTCCAGATGGCAGCTaGTGGCCCAAGACGTTAAATCTTCCCCAAATGCTGTGTCAGCAG +
Preference number: 1 (lower is better)
Translates to: WDRTTCYVVMVPDGS*WPKTLNLPQMLCQQ
Trigger: CTGCTGACACAGCATTTGGGGAAGATTTAACGTCTTGGGCCAGCAGCTGCCATCTGGAACCATCACCACATAGCAGGTTGTTCTGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GAGCCCAAAGATACAGGTGTCTGCACACGATGGAAATGGAACCTGTaGAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATGAG +
Preference number: 1 (lower is better)
Translates to: EPKDTGVCTRWKWNL*KVHAKSVHRAHFHE
Trigger: CTCATGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATCTTTGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTaGACACGATGGAAATGGAACCTGTGCAAAGTCCATGCAAAGTCT +
Preference number: 1 (lower is better)
Translates to: VKRAGAHVEPKDTGV*TRWKWNLCKVHAKS
Trigger: AGACTTTGCATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp AAAAGAGCACACAGTGGCTCTCAACACAGCTTTCACCTTCCTCCCTaGATTCTGCCATTCCTGGATGTGCTTACACAGAGCTGGCTGCTC +
Preference number: 1 (lower is better)
Translates to: KRAHSGSQHSFHLPP*ILPFLDVLTQSWLL
Trigger: GAGCAGCCAGCTCTGTGTAAGCACATCCAGGAATGGCAGAATCCAGGGAGGAAGGTGAAAGCTGTGTTGAGAGCCACTGTGTGCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp TTCATTGTTCCTCGAGCATTGTCCAAGCTCAGAGCTGGGTATGTCTaGAGGAAGGGGCAAAAGGTGTCCTTTGCCAGTCAAGCCAAGTGC +
Preference number: 1 (lower is better)
Translates to: FIVPRALSKLRAGYV*RKGQKVSFASQAKC
Trigger: GCACTTGGCTTGACTGGCAAAGGACACCTTTTGCCCCTTCCTCCAGACATACCCAGCTCTGAGCTTGGACAATGCTCGAGGAACAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp CTGATTCCAGCCCAGCCACTCCTCATGGCTTTTATATGGCCCTGCTaGGCCCTGGCGATCTGGTTTGAAAATCATGGTTCTATCTCAATC +
Preference number: 1 (lower is better)
Translates to: LIPAQPLLMAFIWPC*ALAIWFENHGSISI
Trigger: GATTGAGATAGAACCATGATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAAAGCCATGAGGAGTGGCTGGGCTGGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp AGTTGGATGGGACAGAACAACCTGCTATGTGGTGATGGTTCCAGATaGCAGCTGCTGGCCCAAGACGTTAAATCTTCCCCAAATGCTGTG +
Preference number: 1 (lower is better)
Translates to: SWMGQNNLLCGDGSR*QLLAQDVKSSPNAV
Trigger: CACAGCATTTGGGGAAGATTTAACGTCTTGGGCCAGCAGCTGCCATCTGGAACCATCACCACATAGCAGGTTGTTCTGTCCCATCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp TGCTGGCCCAAGACGTTAAATCTTCCCCAAATGCTGTGTCAGCAGTaGTTATGCAATGTCGGGGAAGGAGAAATAACACAGCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: CWPKTLNLPQMLCQQ*LCNVGEGEITQLGL
Trigger: GAGGCCCAGCTGTGTTATTTCTCCTTCCCCGACATTGCATAATCACTGCTGACACAGCATTTGGGGAAGATTTAACGTCTTGGGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp ACAGAAGCTCAGAAGTTAGTTTGCCAAGATCACCCAGAGATCTGGTaGCAGAGCTGGGACTCCAATCTAAATCTGGCTGACTCCCAAACC +
Preference number: 1 (lower is better)
Translates to: TEAQKLVCQDHPEIW*QSWDSNLNLADSQT
Trigger: GGTTTGGGAGTCAGCCAGATTTAGATTGGAGTCCCAGCTCTGTCACCAGATCTCTGGGTGATCTTGGCAAACTAACTTCTGAGCTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp CTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTaGCCACGTTCAACAGAGAATCCGCGCTGTTTGTTTGCTGGCAAA +
Preference number: 1 (lower is better)
Translates to: LIINYGKIQTSTRQC*PRSTENPRCLFAGK
Trigger: TTTGCCAGCAAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GGAGGGGAGACAGACTATAATCAGACTGGTTTAGAGGCCAGATTTTaGCTGTCATCGACTCAGATGTGCTATGTAAATTCTTCTGGCCAT +
Preference number: 1 (lower is better)
Translates to: GGETDYNQTGLEARF*LSSTQMCYVNSSGH
Trigger: ATGGCCAGAAGAATTTACATAGCACATCTGAGTCGATGACAGCCAAAATCTGGCCTCTAAACCAGTCTGATTATAGTCTGTCTCCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp CCTCATGGCTTTTATATGGCCCTGCTGGGCCCTGGCGATCTGGTTTaGAAATCATGGTTCTATCTCAATCCAATCAATGGAAAACTGAAT +
Preference number: 1 (lower is better)
Translates to: PHGFYMALLGPGDLV*KSWFYLNPINGKLN
Trigger: ATTCAGTTTTCCATTGATTGGATTGAGATAGAACCATGATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAAAGCCATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 90 bp GCAATGTTGGCCACGTTCAACAGAGAATCCGCGCTGTTTGTTTGCTaGCAAACACCTGTGTGGACTACTTGTTTCTTTATTTTTGAGACA +
Preference number: 1 (lower is better)
Translates to: AMLATFNRESALFVC*QTPVWTTCFFIFET
Trigger: TGTCTCAAAAATAAAGAAACAAGTAGTCCACACAGGTGTTTGCCAGCAAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp CACGGAAGGAGAACAGCTCCTCACCAAAGCAGCCATGATGGATTCTaGCATTTTCGTAAGACACATCTGTACTTGCTAATTCTGACTTTT +
Preference number: 1 (lower is better)
Translates to: HGRRTAPHQSSHDGF*HFRKTHLYLLILTF
Trigger: AAAAGTCAGAATTAGCAAGTACAGATGTGTCTTACGAAAATGTCAGAATCCATCATGGCTGCTTTGGTGAGGAGCTGTTCTCCTTCCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp GACCCTTTCAAGGCGGCCATTTTGGTTGCAAATTTGCAACTGCAGTaGAGTTTAGAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTC +
Preference number: 1 (lower is better)
Translates to: DPFKAAILVANLQLQ*SLECLKITVLCSQF
Trigger: GAACTGGGAACATAGGACTGTTATTTTCAAACACTCTAAACTTCACTGCAGTTGCAAATTTGCAACCAAAATGGCCGCCTTGAAAGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 90 bp GTTGGCTCTTCCCAGGCTCTTCGAGCATCTAATTTAGGCAAGGACTaGATGGTGCCCAGAGTTATAAACTATCACATAATCTTTATTATC +
Preference number: 1 (lower is better)
Translates to: VGSSQALRASNLGKD*MVPRVINYHIIFII
Trigger: GATAATAAAGATTATGTGATAGTTTATAACTCTGGGCACCATGCAGTCCTTGCCTAAATTAGATGCTCGAAGAGCCTGGGAAGAGCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp TCAAACATTCATCTGAAACCTTTAAGATTCAGACTACCTTCTGTCTaGCCAAACTCTTCCCAAAGGCACCTTTCTCAGATACTAAAGCCA +
Preference number: 1 (lower is better)
Translates to: SNIHLKPLRFRLPSV*PNSSQRHLSQILKP
Trigger: TGGCTTTAGTATCTGAGAAAGGTGCCTTTGGGAAGAGTTTGGTCAGACAGAAGGTAGTCTGAATCTTAAAGGTTTCAGATGAATGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp CAGGGATTTAAACAAATTAGCAGTGCGATTGAGGCCGTGGATTGTTaGGGCATGTGTATATTTAAAAACAACTTGGTCAAACAGTACAAA +
Preference number: 1 (lower is better)
Translates to: QGFKQISSAIEAVDC*GMCIFKNNLVKQYK
Trigger: TTTGTACTGTTTGACCAAGTTGTTTTTAAATATACACATGCCTCAACAATCCACGGCCTCAATCGCACTGCTAATTTGTTTAAATCCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 90 bp AATACAGGAAAAATAATAATCCCTGCCTCAGAGACCAACCAGTTATaGATTCATCCAAGTAATTCGTGGTCTCTACTTCTCCATTTTAAT +
Preference number: 1 (lower is better)
Translates to: NTGKIIIPASETNQL*IHPSNSWSLLLHFN
Trigger: ATTAAAATGGAGAAGTAGAGACCACGAATTACTTGGATGAATTCATAACTGGTTGGTCTCTGAGGCAGGGATTATTATTTTTCCTGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACCCATTTCTGGGACCTaGGGGCGCAAGGCTCCACAG +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPPISGT*GRKAPQ
Trigger: CTGTGGAGCCTTGCGCCCTCAGGTCCCAGAAATGGG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACCTCCTGTGCTGGCCTaGTCCCGGAGTGCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEPPVLA*SRSAVQ
Trigger: CTGGACAGCACTCCGGGAGCAGGCCAGCACAGGAGG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCGGCGGGGAATGCAGTaGAGACCCCCAGGAAGGTGT +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHRRGMQ*RPPGRC
Trigger: ACACCTTCCTGGGGGTCTCCACTGCATTCCCCGCCG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGACTCACCACGGACCTaGGTCTTGGCAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVDSPRT*VLAGRR
Trigger: TCTCCTCCCTGCCAAGACTCAGGTCCGTGGTGAGTC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGGCAGGAGGATTGCCTaGGCCCAGGAGTTTCAGGCT +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHGRRIA*AQEFQA
Trigger: AGCCTGAAACTCCTGGGCTCAGGCAATCCTCCTGCC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTAGAGCAGGCATGCACTaGATGGGAAGAGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVRAGMH*MGRGWG
Trigger: CCCCCACCCTCTTCCCATGCAGTGCATGCCTGCTCT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp GGTGAGCCACAGCTAGGACGTGGGTTCTCCATACCCATACCAGTGTaGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTC +
Preference number: 2 (lower is better)
Translates to: GEPQLGRGFSIPIPV*ACFGQCQLSRQQAL
Trigger: GAGTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGGGTATGGAGAACCCACGTCCTAGCTGTGGCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTCCCATGCAGCCAGATaGCCACTGTGCTCCTACTCC +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVSHAAR*PLCSYS
Trigger: GGAGTAGGAGCACAGTGGTCATCTGGCTGCATGGGA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAGCCAGTCAAGCCAAGTaGTCATGGGGACTTCTGCCC +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPASQAK*SWGLLP
Trigger: GGGCAGAAGTCCCCATGAGCACTTGGCTTGACTGGC...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAGCTTGGAGGAAAACGTaGCAGCTCTCTCCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPAWRKT*QLSPQL
Trigger: CAGCTGGGGAGAGAGCTGCCACGTTTTCCTCCAAGC...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTACTGCGACAGGTGCATaGACCCCAGCACCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVTATGA*TPAPSL
Trigger: GAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGGCCCTGCTGGGCCCTaGCGATCTGGTTTGAAAATC +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVGPAGP*RSGLKI
Trigger: GATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp CCTGATGAGAGCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTaGTGTCTCATGTTTGGTTCTCCCACGCTGGCTGTTAGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: PDESKAQDLWSSRGC*CLMFGSPTLAVRGK
Trigger: TTTTCCCCTAACAGCCAGCGTGGGAGAACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGCTCTCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGGCATTTATTGGCTCTaGGGTCCCCTGTCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVGIYWL*GPLSFP
Trigger: TGGGAAGGACAGGGGACCTCAGAGCCAATAAATGCC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTGCCTTCCAATGGCATaGCCACGGAAGGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHCLPMA*PRKENS
Trigger: GCTGTTCTCCTTCCGTGGTCATGCCATTGGAAGGCA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTCAAACACCCACGCTTaGAGGAAAACGTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VTTKNARSKTCILREVCTSNTHA*RKTWQL
Trigger: GAGCTGCCACGTTTTCCTCCAAGCGTGGGTGTTTGA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACAAGCCAAGTGCTCATaGGGACTTCTGCCCAGATGG +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPQAKCS*GLLPRW
Trigger: CCATCTGGGCAGAAGTCCCCATGAGCACTTGGCTTG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACCTGCTTCTGAGCCTTaGTGGGAGAACATCTCCCCA +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPPASEP*WENISP
Trigger: TGGGGAGATGTTCTCCCACCAAGGCTCAGAAGCAGG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAAGATACCAGGCTGACTaGAAGCTCCCACACAGCCCA +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPRYQAD*KLPHSP
Trigger: TGGGCTGTGTGGGAGCTTCCAGTCAGCCTGGTATCT...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CAACCGAAAAATACGATGCGACGAGGATTTGTATTCGTGCAGCCTGAACTGAAGGCCAGGCCACGCTCATaGGGAAGTGGAGGCCTGTTC +
Preference number: 2 (lower is better)
Translates to: QPKNTMRRGFVFVQPELKARPRS*GSGGLF
Trigger: GAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGC...CTTCAGTTCAGGCTGCACGAATACAAATCCTCGTCGCATCGTATTTTTCGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCCTGCCTCATCCTCCTaGGTAGCTGGGACTATAAGT +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVPASSS*VAGTIS
Trigger: ACTTATAGTCCCAGCTACTCAGGAGGATGAGGCAGG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGCTGACTCCCAAACCTaGCTTCTTTCTCTAGCCCAC +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHADSQT*LLSLAH
Trigger: GTGGGCTAGAGAAAGAAGTCAGGTTTGGGAGTCAGC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTGCCATTCCTGGATGTaGTTACACAGAGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVCHSWM*LHRAGC
Trigger: GCAGCCAGCTCTGTGTAAGCACATCCAGGAATGGCA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTCCGCGCTGTTTGTTTaGTGGCAAACACCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVSALFV*WQTPVW
Trigger: CCACACAGGTGTTTGCCAGCAAACAAACAGCGCGGA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAGCTGGGGCTTGGCCTaGGGTGCCCACCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSWGLA*GAHPLS
Trigger: AGAAAGAGGGTGGGCACCCCAGGCCAAGCCCCAGCT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACAGAGCTGGGTATGTCTaGAGGAAGGGGCAAAAGGTG +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHRAGYV*RKGQKV
Trigger: CACCTTTTGCCCCTTCCTCCAGACATACCCAGCTCT...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCCGCTGGTATGTCAAATaGCAAGCTGTTGCAGCTGTC +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVRWYVK*QAVAAV
Trigger: GACAGCTGCAACAGCTTGTCATTTGACATACCAGCG...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCAGAACTCAGAGAAAATaGGGGCAACACAGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVRTQRK*GQHREQ
Trigger: CTGCTCCCTGTGTTGCCCTCATTTTCTCTGAGTTCT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTGCCCCCAGTGCCTCTaGCTTCCCTCTGTTCCATCC +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFCPQCL*LPSVPS
Trigger: GGATGGAACAGAGGGAAGGCAGAGGCACTGGGGGCA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGTTCCAGATGGCAGCTaGTGGCCCAAGACGTTAAAT +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVVPDGS*WPKTLN
Trigger: ATTTAACGTCTTGGGCCAGCAGCTGCCATCTGGAAC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTGGGCCCTGGCGATCTaGTTTGAAAATCATGGTTCT +
Preference number: 2 (lower is better)
Translates to: VTTKNARSKTCILREVCTWALAI*FENHGS
Trigger: AGAACCATGATTTTCAAACCAGATCGCCAGGGCCCA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCATTGGTGTGCCCAGTaGAAGTTTCCTACAAGGGGT +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHHWCAQ*KFPTRG
Trigger: ACCCCTTGTAGGAAACTTCCACTGGGCACACCAATG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTTCCATGGGGCTCTTaGCCTTCCAGATGGAATCAC +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVFPWGS*PSRWNH
Trigger: GTGATTCCATCTGGAAGGCCAAGAGCCCCATGGAAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAGCAGAGATGCCCTGTaGCCTCCAGGAGAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSRDAL*PPGEAW
Trigger: CCAAGCCTCTCCTGGAGGCCACAGGGCATCTCTGCT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTGCAGTCTCATTTCCTaGCTGAGAAGGTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVCSLIS*LRRSRD
Trigger: ATCTCGGGACCTTCTCAGCCAGGAAATGAGACTGCA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp ATTACACAAAATCACTTAGCAGACCACAGCTCAACAGGATGGATGTaGCTGCAGTCCCAGCTGGACTCAGGGCACGTTCACAAACCAGTC +
Preference number: 2 (lower is better)
Translates to: ITQNHLADHSSTGWM*LQSQLDSGHVHKPV
Trigger: GACTGGTTTGTGAACGTGCCCTGAGTCCAGCTGGGACTGCAGCAACATCCATCCTGTTGAGCTGTGGTCTGCTAAGTGATTTTGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGTTCTGGTTGGAAGGCTaGAATTCTTTCAGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KVRESEWHQKSQPARLGGFWLEG*NSFRRG
Trigger: TCCCCTCCTGAAAGAATTTCAGCCTTCCAACCAGAA...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGGTGAAAGATAGAGACTaGGACCACCAAAATAAAGAG +
Preference number: 2 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGVKDRD*DHQNKE
Trigger: CTCTTTATTTTGGTGGTCTCAGTCTCTATCTTTCAC...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTATAGGAGGGATGGGGTaGGACATGGGGCTGAAGACC +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPIGGMG*DMGLKT
Trigger: GGTCTTCAGCCCCATGTCTCACCCCATCCCTCCTAT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGCCCGAGATACCAGGCTaGCTGGAAGCTCCCACACAG +
Preference number: 2 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKPEIPG*LEAPTQ
Trigger: CTGTGTGGGAGCTTCCAGTCAGCCTGGTATCTCGGG...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACACAATGGTAGAGAAGTaGCAAGACCTGAAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHTMVEK*QDLKVL
Trigger: CAGGACCTTCAGGTCTTGTCACTTCTCTACCATTGT...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAGTAACCATAACACACTaGTGGGCTTGGGAGTCAACA +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPVTITH*WAWEST
Trigger: TGTTGACTCCCAAGCCCAGCAGTGTGTTATGGTTAC...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTGGGACAGAACAACCTaGTATGTGGTGATGGTTCCA +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVWDRTT*YVVMVP
Trigger: TGGAACCATCACCACATAGCAGGTTGTTCTGTCCCA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTGTTTTCCAAGGAAATaGCTGATGAGAGCAAGGCGC +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVCFPRK*LMRARR
Trigger: GCGCCTTGCTCTCATCAGGCATTTCCTTGGAAAACA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATTTCACCTTCCTCCCTaGATTCTGCCATTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPFHLPP*ILPFLD
Trigger: ATCCAGGAATGGCAGAATCCAGGGAGGAAGGTGAAA...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACAAGAAACGTGATTCCTaGAGTAAGAGCGACGCTGGT +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHKKRDS*SKSDAG
Trigger: ACCAGCGTCGCTCTTACTCCAGGAATCACGTTTCTT...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGACACACTGCTGGGCTTaGGAGTCAACAATCCTTAAG +
Preference number: 2 (lower is better)
Translates to: KVRESEWHQKSQPARLGGTHCWA*ESTILK
Trigger: CTTAAGGATTGTTGACTCCCAAGCCCAGCAGTGTGT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGTTTCCTACAAGGGGTaGCAGCTCTGGACAGGGCAT +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPVSYKG*QLWTGH
Trigger: ATGCCCTGTCCAGAGCTGTCACCCCTTGTAGGAAAC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTCTCAAGAAACAGAATaGGCCCCAGAGAAAACACGT +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHSQETE*APEKTR
Trigger: ACGTGTTTTCTCTGGGGCTCATTCTGTTTCTTGAGA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGGCTGCAGTGAGCTGTaGTCACACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFGCSEL*SHHCTP
Trigger: TGGAGTACAGTGGTGTGATCACAGCTCACTGCAGCC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAACCAGTTACCGGACTaGGACAGGTGCATGGACCCC +
Preference number: 2 (lower is better)
Translates to: SRNPLQVTTKNARSKTCINQLPD*DRCMDP
Trigger: GGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCAGTGACCACAAAGAATaGCCGTTCCAAGACATGCAT +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVSDHKE*PFQDMH
Trigger: ATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTGTGAGCCACTACTGTaGCTAGCCAGTTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: ARRKICGAQGDACVSCLVCEPLL*LASFLF
Trigger: AAACAGAAAACTGGCTAGGCACAGTAGTGGCTCACA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCACCCAGCCACTCCTCATaGCTTTTATATGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPPSHSS*LLYGPA
Trigger: AGCAGGGCCATATAAAAGCCATGAGGAGTGGCTGGG...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGACAACTGCCTTCCAATaGCATGACCACGGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQTTAFQ*HDHGRR
Trigger: TCTCCTTCCGTGGTCATGCCATTGGAAGGCAGTTGT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp GATTCCTGGAGTAAGAGCGACGCTGGTATGTCAAATGACAAGCTGTaGCAGCTGTCAAGGGTATTTCAGAAGGAATTGGGGATGAGCTTG +
Preference number: 2 (lower is better)
Translates to: DSWSKSDAGMSNDKL*QLSRVFQKELGMSL
Trigger: CAAGCTCATCCCCAATTCCTTCTGAAATACCCTTGACAGCTGCAACAGCTTGTCATTTGACATACCAGCGTCGCTCTTACTCCAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp GCATTCAAGCAGAGCTTAGCCATGCTATGTATCCCTCTCCTGCACTaGGCACAGCATTACACAAAATCACTTAGCAGACCACAGCTCAAC +
Preference number: 2 (lower is better)
Translates to: AFKQSLAMLCIPLLH*AQHYTKSLSRPQLN
Trigger: GTTGAGCTGTGGTCTGCTAAGTGATTTTGTGTAATGCTGTGCCAAGTGCAGGAGAGGGATACATAGCATGGCTAAGCTCTGCTTGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp CCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTaGGCCACGTTCAACAGAGAATCCGCGCTGTTTGTTTGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: PDHQLWQDTNFDEAM*ATFNRESALFVCWQ
Trigger: TTGCCAGCAAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTAGTTCATCCAGCGTGTaGACCTGCAATGTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLSSSSV*TCNVGC
Trigger: ACACCCCACATTGCAGGTTCACACGCTGGATGAACT...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGCTGGTACATGCTTTCTaGAGGGGAGAGCAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKLVHAF*RGEQGE
Trigger: CTCCCCTTGCTCTCCCCTTCAGAAAGCATGTACCAG...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGATACAACACCATCATaGCAGTTCAGAACACCAAGA +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHDTTPS*QFRTPR
Trigger: TCTTGGTGTTCTGAACTGTCATGATGGTGTTGTATC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATTAAGAAATTTCCCATaGAGGCCCAGCACAAGGTTT +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPLRNFP*RPSTRF
Trigger: AAACCTTGTGCTGGGCCTTCATGGGAAATTTCTTAA...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACTGTTTCTTCCCTCATaGAACCCCATGAAAATAGGA +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPLFLPS*NPMKIG
Trigger: TCCTATTTTCATGGGGTTTCATGAGGGAAGAAACAG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGAAGCCCCGACCACCTaGTCATCAACTATGGCAAGA +
Preference number: 2 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLEAPTT*SSTMAR
Trigger: TCTTGCCATAGTTGATGATCAGGTGGTCGGGGCTTC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGTCTCATTTCCTGGCTaGGAAGGTCCCGAGATACCA +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFVSFPG*EGPEIP
Trigger: TGGTATCTCGGGACCTTCTCAGCCAGGAAATGAGAC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCAACCTGCTATGTGGTaGTGGTTCCAGATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFQPAMW*WFQMAA
Trigger: AGCTGCCATCTGGAACCATCACCACATAGCAGGTTG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGCCCGTTCCAAGACATaGATTCTGAGGGAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSARSKT*ILREVC
Trigger: GCACACCTCCCTCAGAATGCATGTCTTGGAACGGGC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCCACCTGTCATTCTATaGTCAGCCACATTTCTGTTA +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHPPVIL*SATFLL
Trigger: TAACAGAAATGTGGCTGAGCATAGAATGACAGGTGG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTATCAACAACACAGGCTaGCCCCAGTGCCTCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSINNTG*PQCLCL
Trigger: AAGGCAGAGGCACTGGGGGCAGCCTGTGTTGTTGAT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTCCTGTGCAAAGTCCATaGAAAGTCTGTGCACCGGGC +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSPVQSP*KVCAPG
Trigger: GCCCGGTGCACAGACTTTGCATGGACTTTGCACAGG...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGTGCTTACACAGAGCTaGCTGCTCGGATTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFVLTQS*LLGFPL
Trigger: TAGGGGAAATCCGAGCAGCCAGCTCTGTGTAAGCAC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATTTATAAGGGTTGCCTaGTACATGCTTTCTGAAGGG +
Preference number: 2 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPFIRVA*YMLSEG
Trigger: CCCTTCAGAAAGCATGTACCAGGCAACCCTTATAAA...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAGAAATGATTCACATTTaGGTTGGCTCTTCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEEMIHI*VGSSQA
Trigger: AGCCTGGGAAGAGCCAACCCAAATGTGAATCATTTC...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGTACGGGAATCAGAATaGCATCAGAAATCTCAACCA +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHVRESE*HQKSQP
Trigger: TGGTTGAGATTTCTGATGCCATTCTGATTCCCGTAC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCACAGCTCAACAGGATaGATGTTGCTGCAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLHSSTG*MLLQSQ
Trigger: CTGGGACTGCAGCAACATCCATCCTGTTGAGCTGTG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTCTGGTCTTGAATTCCTaGCCTCAAGCGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPLVLNS*PQAILL
Trigger: CAGGAGGATCGCTTGAGGCCAGGAATTCAAGACCAG...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp TCGACGAGGCAATGTTGGCCACGTTCAACAGAGAATCCGCGCTGTTaGTTTGCTGGCAAACACCTGTGTGGACTACTTGTTTCTTTATTT +
Preference number: 2 (lower is better)
Translates to: STRQCWPRSTENPRC*FAGKHLCGLLVSLF
Trigger: AAATAAAGAAACAAGTAGTCCACACAGGTGTTTGCCAGCAAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTATTATCTGTACCTTTaGGCTTTCATTGATGCCAGG +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHYYLYL*AFIDAR
Trigger: CCTGGCATCAATGAAAGCTCAAAGGTACAGATAATA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCACAAGTTGTAATAGGTaGGAGAAGTATCTTGCAGAG +
Preference number: 2 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVTSCNR*EKYLAE
Trigger: CTCTGCAAGATACTTCTCTCACCTATTACAACTTGT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCACCCCTAAGCAACCTGTaGGATAACTCAAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPPLSNL*DNSNGV
Trigger: AACCCCATTTGAGTTATCTCACAGGTTGCTTAGGGG...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGAGACCAACCAGTTATaGATTCATCCAAGTAATTCG +
Preference number: 2 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHETNQL*IHPSNS
Trigger: CGAATTACTTGGATGAATTCATAACTGGTTGGTCTC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGGGTTGCCTGGTACATaGTTTCTGAAGGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSGLPGT*FLKGRA
Trigger: TGCTCTCCCCTTCAGAAAGCATGTACCAGGCAACCC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAGGATTCTGCCATTCCTaGATGTGCTTACACAGAGCT +
Preference number: 2 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPGFCHS*MCLHRA
Trigger: AGCTCTGTGTAAGCACATCCAGGAATGGCAGAATCC...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTAGCCCCCTCATCAGTTaGATGGGACAGAACAACCTG +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSSPLIS*MGQNNL
Trigger: CAGGTTGTTCTGTCCCATCCAACTGATGAGGGGGCT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTAAGGCGCAAGATCTGTaGAGCTCAAGGGGATGCTTG +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSKAQDL*SSRGCL
Trigger: CAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGTATTCCCAGCATTGTaGGGTCTGGCAACTGCAGAA +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFVFPAL*GLATAE
Trigger: TTCTGCAGTTGCCAGACCCCACAATGCTGGGAATAC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp ACTGGCATTCTGGCACAGCATGGGCTTGTAGAGAATACACACCTATaGATTTTTGCTGGGGCTAAAGGAAGTGGTAGCTATTGCAAACAG +
Preference number: 2 (lower is better)
Translates to: TGILAQHGLVENTHL*IFAGAKGSGSYCKQ
Trigger: CTGTTTGCAATAGCTACCACTTCCTTTAGCCCCAGCAAAAATCAATAGGTGTGTATTCTCTACAAGCCCATGCTGTGCCAGAATGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp ATGTACAGTAGGGAACGACCATTTTTCCGTGTTCACAATTTGTCTTaGGCGGATAGTATCAGCACCACTGTGAGTGACATAGGCAGCATC +
Preference number: 2 (lower is better)
Translates to: MYSRERPFFRVHNLS*ADSISTTVSDIGSI
Trigger: GATGCTGCCTATGTCACTCACAGTGGTGCTGATACTATCCGCCAAAGACAAATTGTGAACACGGAAAAATGGTCGTTCCCTACTGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTTTTCGAACAGTCTGTaGCTTACAGAGATCAACAAC +
Preference number: 2 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWFSNSL*LTEINN
Trigger: GTTGTTGATCTCTGTAAGTCACAGACTGTTCGAAAA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGAAATTCTTCTGGCCATaGTGGAATTCTGTAAACTTG +
Preference number: 2 (lower is better)
Translates to: KVRESEWHQKSQPARLGGKFFWP*WNSVNL
Trigger: CAAGTTTACAGAATTCCAGCATGGCCAGAAGAATTT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTACAAGCAATGGGGTaGTTTGTCCTGCAGACTTCC +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFLQAMG*FVLQTS
Trigger: GGAAGTCTGCAGGACAAACCACCCCATTGCTTGTAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp AGTGGAAAAGCTCACCAGTTGGCACACACAACTTCCAATCAGCTTTaGGATGCCTCACTCTTAAAACATGAACAGATCCATAGGATCACC +
Preference number: 2 (lower is better)
Translates to: SGKAHQLAHTTSNQL*DASLLKHEQIHRIT
Trigger: GGTGATCCTATGGATCTGTTCATGTTTTAAGAGTGAGGCATCCAAAAGCTGATTGGAAGTTGTGTGTGCCAACTGGTGAGCTTTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCAAGCAGCCCTTCATCTaGGAGGTAAGAAACTCAAGT +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFKQPFI*EVRNSS
Trigger: ACTTGAGTTTCTTACCTCTCAGATGAAGGGCTGCTT...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCCTGGCGATCTGGTTTaGAAATCATGGTTCTATCTC +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFPGDLV*KSWFYL
Trigger: GAGATAGAACCATGATTTTCAAACCAGATCGCCAGG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGAAACCCATTACAAGTaGCCACAAAGAATGCCCGTT +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPETHYK*PQRMPV
Trigger: AACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGTTGAAACCCACTGCTTaGAATGAGCAAGTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKLKPTA*NEQVLG
Trigger: GCCAAGGACTTGCTCATTTCAAGCAGTGGGTTTCAA...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAAATCGGAGCTCATGTaGAAGCATTCTTGTCATACA +
Preference number: 2 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQKSELM*KHSCHT
Trigger: TGTATGACAAGAATGCTTTCACATGAGCTCCGATTT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTACGGATCCAGCTGCATaGCTGAGTTTTGAGTACACA +
Preference number: 2 (lower is better)
Translates to: SRNPLQVTTKNARSKTCITDPAA*LSFEYT
Trigger: TGTGTACTCAAAACTCAGGCATGCAGCTGGATCCGT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCAACAGGATGGATGTTaGTGCAGTCCCAGCTGGACT +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHQQDGC*CSPSWT
Trigger: AGTCCAGCTGGGACTGCAGCAACATCCATCCTGTTG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGTGGAGCTCAAGGGGATaGTTGTGTCTCATGTTTGGT +
Preference number: 2 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKWSSRG*LCLMFG
Trigger: ACCAAACATGAGACACAAGCATCCCCTTGAGCTCCA...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTATTTTTCTGTCCTGTaGTTTAGCTTCCTTTCCGAA +
Preference number: 2 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWYFSVL*FSFLSE
Trigger: TTCGGAAAGGAAGCTAAAGCACAGGACAGAAAAATA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACTATGTAAATTCTTCTaGCCATGCTGGAATTCTGTA +
Preference number: 2 (lower is better)
Translates to: HMSTQHRLKALCMPVSQELCKFF*PCWNSV
Trigger: TACAGAATTCCAGCATGGCCAGAAGAATTTACATAG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTTCCCTCTCCTGCACTTaGCACAGCATTACACAAAAT +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSLSCT*HSITQN
Trigger: ATTTTGTGTAATGCTGTGCCAAGTGCAGGAGAGGGA...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTCCCTCATCAGTTGGATaGGACAGAACAACCTGCTAT +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSPSSVG*DRTTCY
Trigger: ATAGCAGGTTGTTCTGTCCCATCCAACTGATGAGGG...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTGCACACGATGGAAATaGAACCTGTGCAAAGTCCAT +
Preference number: 2 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLCTRWK*NLCKVH
Trigger: ATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTCTCCTGACTCATTTGTaGTTTTATAAGGGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPLLTHL*FYKGCL
Trigger: CAGGCAACCCTTATAAAATCACAAATGAGTCAGGAG...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTCAAATGACAAGCTGTTaGAGCTGTCAAGGGTATTTC +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPQMTSC*SCQGYF
Trigger: GAAATACCCTTGACAGCTGCAACAGCTTGTCATTTG...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCTATGTTCCCAGTTCTaGTACTTACTAGTTCACGCT +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFLCSQF*YLLVHA
Trigger: AGCGTGAACTAGTAAGTAGCAGAACTGGGAACATAG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTTTTCTCAGGACATTaGTGTGCCCAGTGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFFFSGH*CAQWKF
Trigger: AAACTTCCACTGGGCACACCAATGTCCTGAGAAAAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACGCGCTGTTTGTTTGCTaGCAAACACCTGTGTGGACT +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHALFVC*QTPVWT
Trigger: AGTCCACACAGGTGTTTGCCAGCAAACAAACAGCGC...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCCAGATGGCAGCTGCTaGCCCAAGACGTTAAATCTT +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHPDGSC*PKTLNL
Trigger: AAGATTTAACGTCTTGGGCCAGCAGCTGCCATCTGG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACGTGCGATTGAGGCCGTaGATTGTTGAGGCATGTGTA +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHVRLRP*IVEACV
Trigger: TACACATGCCTCAACAATCCACGGCCTCAATCGCAC...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGGATTGGAGAGAGGTTaGAAGAAGCTATGGTACACT +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSGLERG*KKLWYT
Trigger: AGTGTACCATAGCTTCTTCCAACCTCTCTCCAATCC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTTGCATGCCTGAGTTTTaGGTACACAGCCAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SRNPLQVTTKNARSKTCICMPEF*VHSQRK
Trigger: TTTTCTTTGGCTGTGTACTCAAAACTCAGGCATGCA...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTATCAAGATGGTATACTaGACACATGAGCCTGTTTCT +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPIKMVY*THEPVS
Trigger: AGAAACAGGCTCATGTGTTCAGTATACCATCTTGAT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACATGCTGTGTCAGCAGTaGTTATGCAATGTCGGGGAA +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHMLCQQ*LCNVGE
Trigger: TTCCCCGACATTGCATAATCACTGCTGACACAGCAT...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGTTAATTGGAGGCCCTaGAGAACTGTCTTTGATGTT +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSVNWRP*RTVFDV
Trigger: AACATCAAAGACAGTTCTTCAGGGCCTCCAATTAAC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACATTTCCCCTAGTGAATaGAACCAGTTACCGGACTGC +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHISPSE*NQLPDC
Trigger: GCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAAT...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTTCATCGACTCAGATGTaGTATGTAAATTCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSSTQM*YVNSSG
Trigger: GCCAGAAGAATTTACATAGCACATCTGAGTCGATGA...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACTGGGGTGGTTTGTCCTaGAGACTTCCACATCCATTT +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHWGGLS*RLPHPF
Trigger: AAATGGATGTGGAAGTCTGCAGGACAAACCACCCCA...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTGGAAATGGAACCTGTaGAAAGTCCATGCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSWKWNL*KVHAKS
Trigger: AGACTTTGCATGGACTTTGCACAGGTTCCATTTCCA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCAAAATTTACAAGCAATaGGGTGGTTTGTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: FKETNFLLTALGSRFPRFKIYKQ*GGLSCR
Trigger: TCTGCAGGACAAACCACCCCATTGCTTGTAAATTTT...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 90 bp CTGTTGCAGCTGTCAAGGGTATTTCAGAAGGAATTGGGGATGAGCTaGAAGGTGAGTAAGAATTCCTCATGGGAAAAATACAAGAACAAA +
Preference number: 2 (lower is better)
Translates to: LLQLSRVFQKELGMS*KVSKNSSWEKYKNK
Trigger: TTTGTTCTTGTATTTTTCCCATGAGGAATTCTTACTCACCTTCAAGCTCATCCCCAATTCCTTCTGAAATACCCTTGACAGCTGCAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR TCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACAGGCACAGCAAAGGTTaGAGCAACTTAATGAAAGTC +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHRHSKG*SNLMKV
Trigger: GACTTTCATTAAGTTGCTTCAACCTTTGCTGTGCCT...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCATAGACTATATCTTTaGGGAGGCAGGAGATCTAAG +
Preference number: 2 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHHRLYL*GGRRSK
Trigger: CTTAGATCTCCTGCCTCCCCAAAGATATAGTCTATG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp GGGCGCAAGGCTCCACAGAGGAATACCGGCGGGGAATaGAGTGGAGACCCCCAGGAAGGTGTCTCCAAGCAG +
Preference number: 3 (lower is better)
Translates to: GRKAPQRNTGGE*SGDPQEGVSKQ
Trigger: CTGCTTGGAGACACCTTCCTGGGGGTCTCCACTGCATTCCCCGCCGGTATTCCTCTGTGGAGCCTTGCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp CCTACAAGGGGTGACAGCTCTGGACAGGGCATCAGGTaGCTGTGTGCTCACTGCAAGTCTGCCCCTGGTCGG +
Preference number: 3 (lower is better)
Translates to: PTRGDSSGQGIR*LCAHCKSAPGR
Trigger: CCGACCAGGGGCAGACTTGCAGTGAGCACACAGGCACCTGATGCCCTGTCCAGAGCTGTCACCCCTTGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp GTGGCTGCCCGAGGGGCAGCAAGAGTGTCCTGCTTCTaGGCCTTGGTGGGAGAACATCTCCCCACAAAGGTC +
Preference number: 3 (lower is better)
Translates to: VAARGAARVSCF*ALVGEHLPTKV
Trigger: GACCTTTGTGGGGAGATGTTCTCCCACCAAGGCTCAGAAGCAGGACACTCTTGCTGCCCCTCGGGCAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp AGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTaGCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTT +
Preference number: 3 (lower is better)
Translates to: RQTSGSAPPGVK*QATLMGKWRPV
Trigger: AACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR TCA 72 bp TTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTaGAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: LQGKPVGQLHQV*SARPRSWGSGG
Trigger: GCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR GCA 72 bp AACCTCAGAAATGGAGACGCCCATGTTCTGGGTGGCTaGCCGAGGGGCAGCAAGAGTGTCCTGCTTCTGAGC +
Preference number: 3 (lower is better)
Translates to: NLRNGDAHVLGG*PRGSKSVLLLS
Trigger: GCTCAGAAGCAGGACACTCTTGCTGCCCCTCGGGCAGCCACCCAGAACATGGGCGTCTCCATTTCTGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp ACCAGGCTGACTGGAAGCTCCCACACAGCCCATTTCTaGGACCTGAGGGCGCAAGGCTCCACAGAGGAATAC +
Preference number: 3 (lower is better)
Translates to: TRLTGSSHTAHF*DLRAQGSTEEY
Trigger: GTATTCCTCTGTGGAGCCTTGCGCCCTCAGGTCCCAGAAATGGGCTGTGTGGGAGCTTCCAGTCAGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CAGGTTGGGGGAAGATGGCATTACAAGGCAAACCAGTaGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCAC +
Preference number: 3 (lower is better)
Translates to: QVGGRWHYKANQ*VSSTRCEVPGH
Trigger: GTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR TCA 72 bp ACATTGGTGTGCCCAGTGGAAGTTTCCTACAAGGGGTaGCAGCTCTGGACAGGGCATCAGGTGCCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: TLVCPVEVSYKG*QLWTGHQVPVC
Trigger: GCACACAGGCACCTGATGCCCTGTCCAGAGCTGTCACCCCTTGTAGGAAACTTCCACTGGGCACACCAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AGACATGGGGCTGAAGACCAGGGCATTTATTGGCTCTaGGGTCCCCTGTCCTTCCCATGCAGCCAGATGACC +
Preference number: 3 (lower is better)
Translates to: RHGAEDQGIYWL*GPLSFPCSQMT
Trigger: GGTCATCTGGCTGCATGGGAAGGACAGGGGACCTCAGAGCCAATAAATGCCCTGGTCTTCAGCCCCATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp CCTAGTGAATGCAACCAGTTACCGGACTGCGACAGGTaGATGGACCCCAGCACCTTCTCTCAAACACCCACG +
Preference number: 3 (lower is better)
Translates to: PSECNQLPDCDR*MDPSTFSQTPT
Trigger: CGTGGGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp AGCTCTGGACAGGGCATCAGGTGCCTGTGTGCTCACTaGAAGTCTGCCCCTGGTCGGCTATATGATCTTGGT +
Preference number: 3 (lower is better)
Translates to: SSGQGIRCLCAH*KSAPGRLYDLG
Trigger: ACCAAGATCATATAGCCGACCAGGGGCAGACTTGCAGTGAGCACACAGGCACCTGATGCCCTGTCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp GCAGCCCCCTCATCAGTTGGATGGGACAGAACAACCTaGTATGTGGTGATGGTTCCAGATGGCAGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: AAPSSVGWDRTT*YVVMVPDGSCW
Trigger: CCAGCAGCTGCCATCTGGAACCATCACCACATAGCAGGTTGTTCTGTCCCATCCAACTGATGAGGGGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GTGAATGCAACCAGTTACCGGACTGCGACAGGTGCATaGACCCCAGCACCTTCTCTCAAACACCCACGCTTG +
Preference number: 3 (lower is better)
Translates to: VNATSYRTATGA*TPAPSLKHPRL
Trigger: CAAGCGTGGGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp GTGTGCTCACTGCAAGTCTGCCCCTGGTCGGCTATATaGTCTTGGTCAAGCTGCTCTGTCTCTCTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: VCSLQVCPWSAI*SWSSCSVSLGP
Trigger: TGGACCCAGAGAGACAGAGCAGCTTGACCAAGATCATATAGCCGACCAGGGGCAGACTTGCAGTGAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp CGGATTTCCCCTAGTGAATGCAACCAGTTACCGGACTaGGACAGGTGCATGGACCCCAGCACCTTCTCTCAA +
Preference number: 3 (lower is better)
Translates to: RISPSECNQLPD*DRCMDPSTFSQ
Trigger: TTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp TACACAGAGCTGGCTGCTCGGATTTCCCCTAGTGAATaGAACCAGTTACCGGACTGCGACAGGTGCATGGAC +
Preference number: 3 (lower is better)
Translates to: YTELAARISPSE*NQLPDCDRCMD
Trigger: GTCCATGCACCTGTCGCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAATCCGAGCAGCCAGCTCTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp CCAGCCCAGCCACTCCTCATGGCTTTTATATGGCCCTaGTGGGCCCTGGCGATCTGGTTTGAAAATCATGGT +
Preference number: 3 (lower is better)
Translates to: PAQPLLMAFIWP*WALAIWFENHG
Trigger: ACCATGATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAAAGCCATGAGGAGTGGCTGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp GAGAGCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATaGTTGTGTCTCATGTTTGGTTCTCCCACGCTGGCT +
Preference number: 3 (lower is better)
Translates to: ESKAQDLWSSRG*LCLMFGSPTLA
Trigger: AGCCAGCGTGGGAGAACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CAGCCTGAACTGAAGCACACTGACGCTCCTCCAGGTTaGGGGAAGATGGCATTACAAGGCAAACCAGTGGGT +
Preference number: 3 (lower is better)
Translates to: QPELKHTDAPPG*GKMALQGKPVG
Trigger: ACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTTCAGTTCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGCCTCCAGGAGAGGCTaGGGGATTGGAATAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWASRRG*GIGIGG
Trigger: CCCTCCTATTCCAATCCCCAAGCCTCTCCTGGAGGC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp CTTGGTGGGAGAACATCTCCCCACAAAGGTCAGGTCTaGCCAGGAAGCCCCGACCACCTGATCATCAACTAT +
Preference number: 3 (lower is better)
Translates to: LGGRTSPHKGQV*PGSPDHLIINY
Trigger: ATAGTTGATGATCAGGTGGTCGGGGCTTCCTGGTCAGACCTGACCTTTGTGGGGAGATGTTCTCCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp CATCAGTTGGATGGGACAGAACAACCTGCTATGTGGTaGTGGTTCCAGATGGCAGCTGCTGGCCCAAGACGT +
Preference number: 3 (lower is better)
Translates to: HQLDGTEQPAMW*WFQMAAAGPRR
Trigger: ACGTCTTGGGCCAGCAGCTGCCATCTGGAACCATCACCACATAGCAGGTTGTTCTGTCCCATCCAACTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp AGCACCACTGTGAGTGACATAGGCAGCATCTTATGGTaGAATTTCAAGGGCAGAGGGCAGGTGTCCCCTGCA +
Preference number: 3 (lower is better)
Translates to: STTVSDIGSILW*NFKGRGQVSPA
Trigger: TGCAGGGGACACCTGCCCTCTGCCCTTGAAATTGCACCATAAGATGCTGCCTATGTCACTCACAGTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CTGATTCCAGCCCAGCCACTCCTCATGGCTTTTATATaGCCCTGCTGGGCCCTGGCGATCTGGTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: LIPAQPLLMAFI*PCWALAIWFEN
Trigger: ATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAAAGCCATGAGGAGTGGCTGGGCTGGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CCTCGAGCATTGTCCAAGCTCAGAGCTGGGTATGTCTaGAGGAAGGGGCAAAAGGTGTCCTTTGCCAGTCAA +
Preference number: 3 (lower is better)
Translates to: PRALSKLRAGYV*RKGQKVSFASQ
Trigger: TTGACTGGCAAAGGACACCTTTTGCCCCTTCCTCCAGACATACCCAGCTCTGAGCTTGGACAATGCTCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CAGGACTCGGGCACACTGAGTATAGACCAGGGTCTCTaGATATGGTCCTACAGTTGTGCATTGCACAGAGGC +
Preference number: 3 (lower is better)
Translates to: QDSGTLSIDQGL*IWSYSCALHRG
Trigger: GCCTCTGTGCAATGCACAACTGTAGGACCATATCCAGAGACCCTGGTCTATACTCAGTGTGCCCGAGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTTCTCAACCAGCACGCTaGGGAGGGGCTAGGGGAGGG +
Preference number: 3 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSQPAR*GGARGG
Trigger: CCCTCCCCTAGCCCCTCCCAAGCGTGCTGGTTGAGA...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATaGGCTGCTGACTGCTGTTTTCCAAGGAAATGCCTG +
Preference number: 3 (lower is better)
Translates to: SPCKVCAPGSLP*AADCCFPRKCL
Trigger: CAGGCATTTCCTTGGAAAACAGCAGTCAGCAGCTCATGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp GATACAGGTGTCTGCACACGATGGAAATGGAACCTGTaGAAAGTCCATGCAAAGTCTGTGCACCGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: DTGVCTRWKWNL*KVHAKSVHRAH
Trigger: GTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp GCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTaGACACGATGGAAATGGAACCTGTGCAAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: AGAHVEPKDTGV*TRWKWNLCKVH
Trigger: ATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATCTTTGGGCTCCACGTGAGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CGGCTATATGATCTTGGTCAAGCTGCTCTGTCTCTCTaGGTCCAGCTAGACAAGATGCTCACTGAGTCCCCT +
Preference number: 3 (lower is better)
Translates to: RLYDLGQAALSL*VQLDKMLTESP
Trigger: AGGGGACTCAGTGAGCATCTTGTCTAGCTGGACCCAGAGAGACAGAGCAGCTTGACCAAGATCATATAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GCCCACCTGGTGACCCTAGTGGAAAAGCTCACCAGTTaGCACACACAACTTCCAATCAGCTTTTGGATGCCT +
Preference number: 3 (lower is better)
Translates to: AHLVTLVEKLTS*HTQLPISFWMP
Trigger: AGGCATCCAAAAGCTGATTGGAAGTTGTGTGTGCCAACTGGTGAGCTTTTCCACTAGGGTCACCAGGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp TCGGGCACACTGAGTATAGACCAGGGTCTCTGGATATaGTCCTACAGTTGTGCATTGCACAGAGGCACTTGG +
Preference number: 3 (lower is better)
Translates to: SGTLSIDQGLWI*SYSCALHRGTW
Trigger: CCAAGTGCCTCTGTGCAATGCACAACTGTAGGACCATATCCAGAGACCCTGGTCTATACTCAGTGTGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GGACAGAACAACCTGCTATGTGGTGATGGTTCCAGATaGCAGCTGCTGGCCCAAGACGTTAAATCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: GQNNLLCGDGSR*QLLAQDVKSSP
Trigger: TGGGGAAGATTTAACGTCTTGGGCCAGCAGCTGCCATCTGGAACCATCACCACATAGCAGGTTGTTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GACCTTGTCATTAGGGCAGCCCCCTCATCAGTTGGATaGGACAGAACAACCTGCTATGTGGTGATGGTTCCA +
Preference number: 3 (lower is better)
Translates to: DLVIRAAPSSVG*DRTTCYVVMVP
Trigger: TGGAACCATCACCACATAGCAGGTTGTTCTGTCCCATCCAACTGATGAGGGGGCTGCCCTAATGACAAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp TGGGTTCTCCATACCCATACCAGTGTTGGCCTGCTTTaGACAATGTCAACTCTCCAGACAACAGGCACTCCC +
Preference number: 3 (lower is better)
Translates to: WVLHTHTSVGLL*TMSTLQTTGTP
Trigger: GGGAGTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGGGTATGGAGAACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp ATCAGCACCACTGTGAGTGACATAGGCAGCATCTTATaGTGCAATTTCAAGGGCAGAGGGCAGGTGTCCCCT +
Preference number: 3 (lower is better)
Translates to: ISTTVSDIGSIL*CNFKGRGQVSP
Trigger: AGGGGACACCTGCCCTCTGCCCTTGAAATTGCACCATAAGATGCTGCCTATGTCACTCACAGTGGTGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTATTGTTCCTCGAGCATaGTCCAAGCTCAGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: ARRKICGAQGDACVSCLVIVPRA*SKLRAG
Trigger: CCCAGCTCTGAGCTTGGACAATGCTCGAGGAACAAT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTCCTACAGTTGTGCATaGCACAGAGGCACTTGGCTA +
Preference number: 3 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHSYSCA*HRGTWL
Trigger: TAGCCAAGTGCCTCTGTGCAATGCACAACTGTAGGA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GAAACTCAAGTTCATCCAGCGTGTGAACCTGCAATGTaGGGTGTGCTAAGATCCAGGCGGGCTAATGATCAC +
Preference number: 3 (lower is better)
Translates to: ETQVHPACEPAM*GVLRSRRANDH
Trigger: GTGATCATTAGCCCGCCTGGATCTTAGCACACCCCACATTGCAGGTTCACACGCTGGATGAACTTGAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp TTAGCTCATTTTCCATGGGGCTCTTGGCCTTCCAGATaGAATCACTCCAAGCTCCCAGCAGCTTTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: LAHFPWGSWPSR*NHSKLPAAFWL
Trigger: CAACCAGAAAGCTGCTGGGAGCTTGGAGTGATTCCATCTGGAAGGCCAAGAGCCCCATGGAAAATGAGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp ACCTGCTATGTGGTGATGGTTCCAGATGGCAGCTGCTaGCCCAAGACGTTAAATCTTCCCCAAATGCTGTGT +
Preference number: 3 (lower is better)
Translates to: TCYVVMVPDGSC*PKTLNLPQMLC
Trigger: ACACAGCATTTGGGGAAGATTTAACGTCTTGGGCCAGCAGCTGCCATCTGGAACCATCACCACATAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGACTTCCAATCAGCTTTaGGATGCCTCACTCTTAAAA +
Preference number: 3 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGTSNQL*DASLLK
Trigger: TTTTAAGAGTGAGGCATCCAAAAGCTGATTGGAAGT...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGATATGGTCCTACAGTaGTGCATTGCACAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWDMVLQ*CIAQRH
Trigger: GTGCCTCTGTGCAATGCACAACTGTAGGACCATATC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCATTGTGCAGGCTGGTCTaGAATTCCTGGCCTCAAGCG +
Preference number: 3 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPLCRLV*NSWPQA
Trigger: CGCTTGAGGCCAGGAATTCAAGACCAGCCTGCACAA...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCAGCTCAAGGGGATGCTaGTGTCTCATGTTTGGTTCT +
Preference number: 3 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVSSRGC*CLMFGS
Trigger: AGAACCAAACATGAGACACAAGCATCCCCTTGAGCT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGCTGGGAGGAACTGCTaGCTTGATGTGTTCTCATCA +
Preference number: 3 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWAGRNC*LDVFSS
Trigger: TGATGAGAACACATCAAGCAAGCAGTTCCTCCCAGC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp ACAAAGGTCAGGTCTGACCAGGAAGCCCCGACCACCTaGTCATCAACTATGGCAAGATACAAACTTCGACGA +
Preference number: 3 (lower is better)
Translates to: TKVRSDQEAPTT*SSTMARYKLRR
Trigger: TCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTGGTCGGGGCTTCCTGGTCAGACCTGACCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp GAGAGAGAGGCCGTGTCTCAAAACTCCAGAGGCTTCTaGAGTCCTTCTGGAGAGTTAAGAAAATCGGAGCTC +
Preference number: 3 (lower is better)
Translates to: EREAVSQNSRGF*SPSGELRKSEL
Trigger: GAGCTCCGATTTTCTTAACTCTCCAGAAGGACTTCAGAAGCCTCTGGAGTTTTGAGACACGGCCTCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp TTTTGGCATGTTGCTCCAGCCCTGGCTGGGAGGAACTaGTTGCTTGATGTGTTCTCATCAAGGTTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: FWHVAPALAGRN*LLDVFSSRFSE
Trigger: TTCTGAGAACCTTGATGAGAACACATCAAGCAAGCAGTTCCTCCCAGCCAGGGCTGGAGCAACATGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp CAAAAGGTGTCCTTTGCCAGTCAAGCCAAGTGCTCATaGGGACTTCTGCCCAGATGGGACACCATTTTTGAA +
Preference number: 3 (lower is better)
Translates to: QKVSFASQAKCS*GLLPRWDTIFE
Trigger: TTCAAAAATGGTGTCCCATCTGGGCAGAAGTCCCCATGAGCACTTGGCTTGACTGGCAAAGGACACCTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp TTTCATTGTTCCTCGAGCATTGTCCAAGCTCAGAGCTaGGTATGTCTGGAGGAAGGGGCAAAAGGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: FHCSSSIVQAQS*VCLEEGAKGVL
Trigger: AAGGACACCTTTTGCCCCTTCCTCCAGACATACCCAGCTCTGAGCTTGGACAATGCTCGAGGAACAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GAGCCCAAAGATACAGGTGTCTGCACACGATGGAAATaGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCAC +
Preference number: 3 (lower is better)
Translates to: EPKDTGVCTRWK*NLCKVHAKSVH
Trigger: GTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCAGACACCTGTATCTTTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCTCAAACACCCACGCTaGGAGGAAAACGTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: FKETNFLLTALGSRFPRFLKHPR*EENVAA
Trigger: AGCTGCCACGTTTTCCTCCAAGCGTGGGTGTTTGAG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGAATTGGGGATGAGCTaGAAGGTGAGTAAGAATTCC +
Preference number: 3 (lower is better)
Translates to: ARRKICGAQGDACVSCLVELGMS*KVSKNS
Trigger: GGAATTCTTACTCACCTTCAAGCTCATCCCCAATTC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGTATTTCAGAAGGAATaGGGGATGAGCTTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHVFQKE*GMSLKV
Trigger: CACCTTCAAGCTCATCCCCAATTCCTTCTGAAATAC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AACAGAATGAGCCCCAGAGAAAACACGTGCAAATACTaGCAGGCAGTGTTCTCCAATGATGAGTCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: NRMSPRENTCKY*QAVFSNDESRC
Trigger: GCACCTGGACTCATCATTGGAGAACACTGCCTGTCAGTATTTGCACGTGTTTTCTCTGGGGCTCATTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AAAGCATTCTTGTCATACAACTGCCTTCCAATGGCATaGCCACGGAAGGAGAACAGCTCCTCACCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: KAFLSYNCLPMA*PRKENSSSPKQ
Trigger: CTGCTTTGGTGAGGAGCTGTTCTCCTTCCGTGGTCATGCCATTGGAAGGCAGTTGTATGACAAGAATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp TGGGACTCCAATCTAAATCTGGCTGACTCCCAAACCTaGCTTCTTTCTCTAGCCCACAATACCTCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: WDSNLNLADSQT*LLSLAHNTSQR
Trigger: TCTCTGGGAGGTATTGTGGGCTAGAGAAAGAAGTCAGGTTTGGGAGTCAGCCAGATTTAGATTGGAGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp CAGAAGTTAGTTTGCCAAGATCACCCAGAGATCTGGTaGCAGAGCTGGGACTCCAATCTAAATCTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: QKLVCQDHPEIW*QSWDSNLNLAD
Trigger: GTCAGCCAGATTTAGATTGGAGTCCCAGCTCTGTCACCAGATCTCTGGGTGATCTTGGCAAACTAACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp TTGGAGGAGAAAGGACATGTAACCATAACACACTGCTaGGCTTGGGAGTCAACAATCCTTAAGTGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: LEEKGHVTITHC*AWESTILKCSR
Trigger: CCTGGAGCACTTAAGGATTGTTGACTCCCAAGCCCAGCAGTGTGTTATGGTTACATGTCCTTTCTCCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTTTCCATGGGGCTCTaGGCCTTCCAGATGGAATCA +
Preference number: 3 (lower is better)
Translates to: FKETNFLLTALGSRFPRFFSMGL*AFQMES
Trigger: TGATTCCATCTGGAAGGCCAAGAGCCCCATGGAAAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAAGCAATGGGGTGGTTaGTCCTGCAGACTTCCACAT +
Preference number: 3 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPKQWGG*SCRLPH
Trigger: ATGTGGAAGTCTGCAGGACAAACCACCCCATTGCTT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGATCCGCGCTGTTTGTTaGCTGGCAAACACCTGTGTG +
Preference number: 3 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKIRAVC*LANTCV
Trigger: CACACAGGTGTTTGCCAGCAAACAAACAGCGCGGAT...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTTCGACGAGGCAATGTaGGCCACGTTCAACAGAGAA +
Preference number: 3 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLFDEAM*ATFNRE
Trigger: TTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGAA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AAACCAGTCAGAGCAGCAAGCCCCCTAAGCAACCTGTaGGATAACTCAAATGGGGTTTATGGATCAAGATGG +
Preference number: 3 (lower is better)
Translates to: KPVRAASPLSNL*DNSNGVYGSRW
Trigger: CCATCTTGATCCATAAACCCCATTTGAGTTATCTCACAGGTTGCTTAGGGGGCTTGCTGCTCTGACTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp GTAAGAGCGACGCTGGTATGTCAAATGACAAGCTGTTaGAGCTGTCAAGGGTATTTCAGAAGGAATTGGGGA +
Preference number: 3 (lower is better)
Translates to: VRATLVCQMTSC*SCQGYFRRNWG
Trigger: TCCCCAATTCCTTCTGAAATACCCTTGACAGCTGCAACAGCTTGTCATTTGACATACCAGCGTCGCTCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp CATTTGGAGGAGAAAGGACATGTAACCATAACACACTaGTGGGCTTGGGAGTCAACAATCCTTAAGTGCTCC +
Preference number: 3 (lower is better)
Translates to: HLEEKGHVTITH*WAWESTILKCS
Trigger: GGAGCACTTAAGGATTGTTGACTCCCAAGCCCAGCAGTGTGTTATGGTTACATGTCCTTTCTCCTCCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GTTCTAAACACAAAGAAGCCAGTATTCCCAGCATTGTaGGGTCTGGCAACTGCAGAACACTCAGCTCAGAAA +
Preference number: 3 (lower is better)
Translates to: VLNTKKPVFPAL*GLATAEHSAQK
Trigger: TTTCTGAGCTGAGTGTTCTGCAGTTGCCAGACCCCACAATGCTGGGAATACTGGCTTCTTTGTGTTTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAACCTTTGAGCTTTCATaGATGCCAGGGAGCTCATTA +
Preference number: 3 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPTFELS*MPGSSL
Trigger: TAATGAGCTCCCTGGCATCAATGAAAGCTCAAAGGT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCCAGTATTCCCAGCATaGTGGGGTCTGGCAACTGCA +
Preference number: 3 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHPVFPA*WGLATA
Trigger: TGCAGTTGCCAGACCCCACAATGCTGGGAATACTGG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCAGGCGGCCATTTTGGTaGCAAATTTGCAACTGCAGT +
Preference number: 3 (lower is better)
Translates to: FKETNFLLTALGSRFPRFRRPFW*QICNCS
Trigger: ACTGCAGTTGCAAATTTGCAACCAAAATGGCCGCCT...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp CTGTCCAGAAAGCCTCTTCAAGAAACCCATTACAAGTaGCCACAAAGAATGCCCGTTCCAAGACATGCATTC +
Preference number: 3 (lower is better)
Translates to: LSRKPLQETHYK*PQRMPVPRHAF
Trigger: GAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGAAGAGGCTTTCTGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp AAACCTAAGTCACATATAAAGGTACGGGAATCAGAATaGCATCAGAAATCTCAACCAGCACGCTTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: KPKSHIKVRESE*HQKSQPARLGG
Trigger: CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTTTATATGTGACTTAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp AACTATGGCAAGATACAAACTTCGACGAGGCAATGTTaGCCACGTTCAACAGAGAATCCGCGCTGTTTGTTT +
Preference number: 3 (lower is better)
Translates to: NYGKIQTSTRQC*PRSTENPRCLF
Trigger: AAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTAGACAAGAATGTTTTTaGGCATGTTGCTCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLRQECF*ACCSSP
Trigger: AGGGCTGGAGCAACATGCCAAAAAACATTCTTGTCT...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp TTTTATATGGCCCTGCTGGGCCCTGGCGATCTGGTTTaGAAATCATGGTTCTATCTCAATCCAATCAATGGA +
Preference number: 3 (lower is better)
Translates to: FYMALLGPGDLV*KSWFYLNPING
Trigger: TCCATTGATTGGATTGAGATAGAACCATGATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp CCACTACTGTGCCTAGCCAGTTTTCTGTTTCTTAAGTaGAGCAAGGGTGGTAAAGAAAACCTAGAACCCAGA +
Preference number: 3 (lower is better)
Translates to: PLLCLASFLFLK*SKGGKENLEPR
Trigger: TCTGGGTTCTAGGTTTTCTTTACCACCCTTGCTTCACTTAAGAAACAGAAAACTGGCTAGGCACAGTAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp TTAGAGGCCAGATTTTGGCTGTCATCGACTCAGATGTaGTATGTAAATTCTTCTGGCCATGCTGGAATTCTG +
Preference number: 3 (lower is better)
Translates to: LEARFWLSSTQM*YVNSSGHAGIL
Trigger: CAGAATTCCAGCATGGCCAGAAGAATTTACATAGCACATCTGAGTCGATGACAGCCAAAATCTGGCCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR GCA 72 bp TCCCAGGCTCTTCGAGCATCTAATTTAGGCAAGGACTaGATGGTGCCCAGAGTTATAAACTATCACATAATC +
Preference number: 3 (lower is better)
Translates to: SQALRASNLGKD*MVPRVINYHII
Trigger: GATTATGTGATAGTTTATAACTCTGGGCACCATGCAGTCCTTGCCTAAATTAGATGCTCGAAGAGCCTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCATGTGAAAGCATTCTaGTCATACAACTGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLHVKAF*SYNCLP
Trigger: TGGAAGGCAGTTGTATGACAAGAATGCTTTCACATG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AGTCCTTCTGGAGAGTTAAGAAAATCGGAGCTCATGTaGAAGCATTCTTGTCATACAACTGCCTTCCAATGG +
Preference number: 3 (lower is better)
Translates to: SPSGELRKSELM*KHSCHTTAFQW
Trigger: CCATTGGAAGGCAGTTGTATGACAAGAATGCTTTCACATGAGCTCCGATTTTCTTAACTCTCCAGAAGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AAGACGTTAAATCTTCCCCAAATGCTGTGTCAGCAGTaGTTATGCAATGTCGGGGAAGGAGAAATAACACAG +
Preference number: 3 (lower is better)
Translates to: KTLNLPQMLCQQ*LCNVGEGEITQ
Trigger: CTGTGTTATTTCTCCTTCCCCGACATTGCATAATCACTGCTGACACAGCATTTGGGGAAGATTTAACGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp GCTGTCATCGACTCAGATGTGCTATGTAAATTCTTCTaGCCATGCTGGAATTCTGTAAACTTGAAACCCACT +
Preference number: 3 (lower is better)
Translates to: AVIDSDVLCKFF*PCWNSVNLKPT
Trigger: AGTGGGTTTCAAGTTTACAGAATTCCAGCATGGCCAGAAGAATTTACATAGCACATCTGAGTCGATGACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGTCAAATGACAAGCTGTaGCAGCTGTCAAGGGTATTT +
Preference number: 3 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKSNDKL*QLSRVF
Trigger: AAATACCCTTGACAGCTGCAACAGCTTGTCATTTGA...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTAGGTATAGTCAACGCTaGCTTCAAGAGGAAGGAAAT +
Preference number: 3 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSRYSQR*LQEEGN
Trigger: ATTTCCTTCCTCTTGAAGCAAGCGTTGACTATACCT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp CATCTGAAACCTTTAAGATTCAGACTACCTTCTGTCTaGCCAAACTCTTCCCAAAGGCACCTTTCTCAGATA +
Preference number: 3 (lower is better)
Translates to: HLKPLRFRLPSV*PNSSQRHLSQI
Trigger: TATCTGAGAAAGGTGCCTTTGGGAAGAGTTTGGTCAGACAGAAGGTAGTCTGAATCTTAAAGGTTTCAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGCAAACATAAGAGAGTaGAAAGTGGTTACTTCTAAG +
Preference number: 3 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPANIRE*KVVTSK
Trigger: CTTAGAAGTAACCACTTTCAACTCTCTTATGTTTGC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CCA 72 bp ACAGACTATAATCAGACTGGTTTAGAGGCCAGATTTTaGCTGTCATCGACTCAGATGTGCTATGTAAATTCT +
Preference number: 3 (lower is better)
Translates to: TDYNQTGLEARF*LSSTQMCYVNS
Trigger: AGAATTTACATAGCACATCTGAGTCGATGACAGCCAAAATCTGGCCTCTAAACCAGTCTGATTATAGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AAGGCGGCCATTTTGGTTGCAAATTTGCAACTGCAGTaGAGTTTAGAGTGTTTGAAAATAACAGTCCTATGT +
Preference number: 3 (lower is better)
Translates to: KAAILVANLQLQ*SLECLKITVLC
Trigger: ACATAGGACTGTTATTTTCAAACACTCTAAACTTCACTGCAGTTGCAAATTTGCAACCAAAATGGCCGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR TCA 72 bp AAACAAATTAGCAGTGCGATTGAGGCCGTGGATTGTTaGGGCATGTGTATATTTAAAAACAACTTGGTCAAA +
Preference number: 3 (lower is better)
Translates to: KQISSAIEAVDC*GMCIFKNNLVK
Trigger: TTTGACCAAGTTGTTTTTAAATATACACATGCCTCAACAATCCACGGCCTCAATCGCACTGCTAATTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCACTCGTGTGCAGCCATaGAGCGCGGGCGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTTRVQP*SAGGRA
Trigger: GGCTCTCCCGCCCGCGCTTCATGGCTGCACACGAGT...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGCTCATGGGGCCAGGCCACGCTCATaGGGAAGTGGAGGCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ANQWVSSTRCEVPGHAHGARPRS*GSGGLF
Trigger: GAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGC...CCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp AAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGCTCATCCAGTCCCACTCGTGTaGAGCCATGAAGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KANQWVSSTRCEVPGHAHPVPLV*SHEARA
Trigger: CGCCCGCGCTTCATGGCTGCACACGAGTGGGACTGG...ATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp AAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTGGCTGGGCTCCATCGTGCAGCCTGAACTaGAGCACACTGACGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KCQATLMGKWRPVLGWAPSCSLN*STLTLL
Trigger: GAGGAGCGTCAGTGTGCTTCAGTTCAGGCTGCACGA...TGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR CCA 90 bp TGTGAAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTGGCTGGGCACGCTCATGGGGAAGTaGAGGCCTGTTCTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CEVPGHAHGEVEACSWLGTLMGK*RPVLGW
Trigger: CCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGT...GCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp CCTGAACTGAAGCACACTGACGCTCCTCCAGGTTGGGGGAAGATGGCATTACAAACTCGTGTGCAGCCATaGAGCGCGGGCGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PELKHTDAPPGWGKMALQTRVQP*SAGGRA
Trigger: GGCTCTCCCGCCCGCGCTTCATGGCTGCACACGAGT...TTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTTCAGTTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp GGTTGGGGGAAGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGGGACACAGCAGCTGGTaGCCAGGGCTCAGATTCCGC +
Preference number: 4 (lower is better)
Translates to: GWGKMALQGKPVGQLHQVGHSSW*PGLRFR
Trigger: GCGGAATCTGAGCCCTGGTCACCAGCTGCTGTGTCC...CACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp CAGCCTGAACTGAAGCACACTGACGCTCCTCCAGGTTGGGGGAAGATGGCATTACAGCTCCACCAGGTGTaGAGTGCCAGGCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: QPELKHTDAPPGWGKMALQLHQV*SARPRS
Trigger: TGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTG...TAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTTCAGTTCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp TACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGCTCGGATGTCGCTAATCTaGCCGATGAGCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: YKANQWVSSTRCEVPGHARMSLI*PMSSSR
Trigger: ACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCG...AGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp GGGGAAGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGCCACCAGGTGTGAAGTaGCAGGCCACGCTCATGGGG +
Preference number: 4 (lower is better)
Translates to: GEDGITRQTSGSAPPGVKPPGVK*QATLMG
Trigger: CCCCATGAGCGTGGCCTGGCACTTCACACCTGGTGG...CTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCCAGTCCCACTCGTGTaGAGCCATGAAGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHPVPLV*SHEARA
Trigger: CGCCCGCGCTTCATGGCTGCACACGAGTGGGACTGG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCGTCAGGGAGTCACTCTaGGGGCTGTGGCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTVRESL*GLWLPS
Trigger: ACTGGGGAGCCACAGCCCGCAGAGTGACTCCCTGAC...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGAACTGGAGCTGCTCTaGGAGCCATCGGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHELELL*EPSASS
Trigger: GGAGGAGGCCGATGGCTCTCAGAGCAGCTCCAGTTC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCCACACCACCCCTGCTaGGATACAGCACCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHPHHPC*DTAPGR
Trigger: GCGACCAGGTGCTGTATCTCAGCAGGGGTGGTGTGG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCCCATTTCTGGGACCTaGGGGCGCAAGGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVPISGT*GRKAPQ
Trigger: CTGTGGAGCCTTGCGCCCTCAGGTCCCAGAAATGGG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCCAACCTGCTATGTGGTaGTGGTTCCAGATGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTQPAMW*WFQMAA
Trigger: AGCTGCCATCTGGAACCATCACCACATAGCAGGTTG...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGCCCACTCCTCCAACTaGCCGCAAAGTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHAHSSN*PQSPAP
Trigger: CGGTGCAGGACTTTGCGGGCAGTTGGAGGAGTGGGC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGGCCTGCTCCCGGAGTaGTGTCCAGAAAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQGLLPE*CPESLF
Trigger: GAAGAGGCTTTCTGGACAGCACTCCGGGAGCAGGCC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACAGGGCAGGTGTCCCCTaGACCACATTCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHRAGVP*TTFPPH
Trigger: GTGGGGAGGGAATGTGGTGCAGGGGACACCTGCCCT...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCCTGGCTCCAGGAGCCTaGGGATGTGCAGGGCATCCT +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVLAPGA*GCAGHP
Trigger: AGGATGCCCTGCACATCCCCAGGCTCCTGGAGCCAG...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAACGGCCTCCTCCTCCCTaGAGTCCAGGTCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQRPPPP*SPGLAY
Trigger: ATATGCCAGACCTGGACTCCAGGGAGGAGGAGGCCG...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGCTTACAAGGCAAACCAGTaGGTCAGCTCCACCAGGTGT +
Preference number: 4 (lower is better)
Translates to: YKANQWVSSTRCEVPGHAYKANQ*VSSTRC
Trigger: ACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTA...AGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTGGGGTCAATGGCCTTaGTCACCGCCAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTWGQWP*SPPGKP
Trigger: TGGCTTTCCTGGCGGTGATCAAGGCCATTGACCCCA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCTCGGTGGAGCTGTCTaGCAGCGCATGGCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVLGGAV*QRMAGN
Trigger: GTTTCCAGCCATGCGCTGTCAGACAGCTCCACCGAG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGACTCACCACGGACCTaGGTCTTGGCAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVDSPRT*VLAGRR
Trigger: TCTCCTCCCTGCCAAGACTCAGGTCCGTGGTGAGTC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGGGAGGAGGAACCAATaGAGAGACTCACCACGGACC +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQGRRNQ*RDSPRT
Trigger: GGTCCGTGGTGAGTCTCTGCATTGGTTCCTCCTCCC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGCCAGTCAAGCCAAGTaGTCATGGGGACTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQASQAK*SWGLLP
Trigger: GGGCAGAAGTCCCCATGAGCACTTGGCTTGACTGGC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCATGTTCTGGGTGGCTaGCCGAGGGGCAGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHHVLGG*PRGSKS
Trigger: ACTCTTGCTGCCCCTCGGGCAGCCACCCAGAACATG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAAATACCGGCGGGGAATaGAGTGGAGACCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQNTGGE*SGDPQE
Trigger: TTCCTGGGGGTCTCCACTGCATTCCCCGCCGGTATT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCCAGGTTGGGGGAAGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAATGAGCTCCTCGCGTTaGAACCAGTCCCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: SRLGEDGITRQTSGSAPPMSSSR*NQSHSC
Trigger: ACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCAT...TGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAGTCGCTGGTCTTACCTaGGCCCCCTTGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEVAGLT*APLQDL
Trigger: CAGGTCCTGCAAGGGGGCCCAGGTAAGACCAGCGAC...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTCACTCTGCGGGCTGTaGCTCCCCAGTGACATGGCT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVSLCGL*LPSDMA
Trigger: AGCCATGTCACTGGGGAGCCACAGCCCGCAGAGTGA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAACTGCGACAGGTGCATaGACCCCAGCACCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQTATGA*TPAPSL
Trigger: GAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCAGCAGAGATGCCCTGTaGCCTCCAGGAGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVSRDAL*PPGEAW
Trigger: CCAAGCCTCTCCTGGAGGCCACAGGGCATCTCTGCT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACACACAGCCCATTTCTaGGACCTGAGGGCGCAAGGC +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPHTAHF*DLRAQG
Trigger: GCCTTGCGCCCTCAGGTCCCAGAAATGGGCTGTGTG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGGGCAGGTGCTCACGTaGAGCCCAAAGATACAGGTG +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQGQVLT*SPKIQV
Trigger: CACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGACGCTCCTCCAGGTTaGGGGAAGATGGCATTACAA +
Preference number: 4 (lower is better)
Translates to: HYKANQWVSSTRCEVPGHDAPPG*GKMALQ
Trigger: TTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTC...GTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCAGAGGTCGTGGGGAATaGCGGAAACCTTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTRGRGE*RKPLRG
Trigger: CCCTCTCAAAGGTTTCCGTCATTCCCCACGACCTCT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGTTTCCTACAAGGGGTaGCAGCTCTGGACAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQVSYKG*QLWTGH
Trigger: ATGCCCTGTCCAGAGCTGTCACCCCTTGTAGGAAAC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCTTCTGGTTGGAAGGCTaGAATTCTTTCAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTFWLEG*NSFRRG
Trigger: TCCCCTCCTGAAAGAATTTCAGCCTTCCAACCAGAA...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGCCCGAGATACCAGGCTaGCTGGAAGCTCCCACACAG +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWPEIPG*LEAPTQ
Trigger: CTGTGTGGGAGCTTCCAGTCAGCCTGGTATCTCGGG...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGAGTCTCCAGGCTTTTaGCCCACACCTGACCAAGCT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQESPGF*PTPDQA
Trigger: AGCTTGGTCAGGTGTGGGTCAAAAGCCTGGAGACTC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGGGAACCAGCAGCTCTaGGTCTCCAGGCTTTTGACC +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVGNQQL*VSRLLT
Trigger: GGTCAAAAGCCTGGAGACTCAGAGCTGCTGGTTCCC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTGGCTGGGCTCCAGTAAAGGTCCTCTTCTaGACATTTTCCCTCTCAACT +
Preference number: 4 (lower is better)
Translates to: KCQATLMGKWRPVLGWAPVKVLF*TFSLST
Trigger: AGTTGAGAGGGAAAATGTGCAGAAGAGGACCTTTAC...TGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAATGAGTCTGAGTCTGTaGCCCCTGAGCCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPMSLSL*PLSQGT
Trigger: TGTCCCCTGGCTCAGGGGGCACAGACTCAGACTCAT...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACCGAGGAACTGGAGCTaGTCTGAGAGCCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEPRNWS*SESHRP
Trigger: AGGCCGATGGCTCTCAGAGCAGCTCCAGTTCCTCGG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCATTTCCCCTAGTGAATaGAACCAGTTACCGGACTGC +
Preference number: 4 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTISPSE*NQLPDC
Trigger: GCAGTCCGGTAACTGGTTGCATTCACTAGGGGAAAT...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGGTGATGAGGCTGCCTaGTCAGCGGTCAGGACTCGG +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQGDEAA*SAVRTR
Trigger: CCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTGCCCCCAGTGCCTCTaGCTTCCCTCTGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWCPQCL*LPSVPS
Trigger: GGATGGAACAGAGGGAAGGCAGAGGCACTGGGGGCA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAATCAACAACACAGGCTaGCCCCAGTGCCTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQINNTG*PQCLCL
Trigger: AAGGCAGAGGCACTGGGGGCAGCCTGTGTTGTTGAT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGGGCAGCATCTTATGGTaGAATTTCAAGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGGSILW*NFKGRG
Trigger: CCCTCTGCCCTTGAAATTGCACCATAAGATGCTGCC...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGCACACTGACGCTCCTCCAGGTTGGGGGAAGATGGCATTACAAGGCAAACCAATCAAAGACTCCCCGTaGAGGCCCACCAAGGACACA +
Preference number: 4 (lower is better)
Translates to: KHTDAPPGWGKMALQGKPIKDSP*RPTKDT
Trigger: TGTGTCCTTGGTGGGCCTCCACGGGGAGTCTTTGAT...TGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR CCA 90 bp TCCAGGTTGGGGGAAGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGTGGAGGCCTGTTCTTaGCTGGGCTCCAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: SRLGEDGITRQTSGSAPPVEACS*LGSRIK
Trigger: TTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCAC...TGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
3UTR CAA 72 bp AATCACTTAGCAGACCACAGCTCAACAGGATGGATGTaGCTGCAGTCCCAGCTGGACTCAGGGCACGTTCAC +
Preference number: 4 (lower is better)
Translates to: NHLADHSSTGWM*LQSQLDSGHVH
Trigger: GTGAACGTGCCCTGAGTCCAGCTGGGACTGCAGCAACATCCATCCTGTTGAGCTGTGGTCTGCTAAGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp AGCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTaGTGTCTCATGTTTGGTTCTCCCACGCTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SKAQDLWSSRGC*CLMFGSPTLAV
Trigger: AACAGCCAGCGTGGGAGAACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGGGGGTGAAAGAGAGTaGCTTTCTTCATCGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVGGERE*LSSSWR
Trigger: CCGCCACGATGAAGAAAGTCACTCTCTTTCACCCCC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTGTCTCTTCTGGGGCTaGAGGACAGCCTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHCLFWG*RTAFSF
Trigger: GAAGCTGAAGGCTGTCCTTCAGCCCCAGAAGAGACA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGCTGGTACATGCTTTCTaGAGGGGAGAGCAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGLVHAF*RGEQGE
Trigger: CTCCCCTTGCTCTCCCCTTCAGAAAGCATGTACCAG...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACCGGGCTCACTTCCATaGGCTGCTGACTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPPGSLP*AADCCF
Trigger: AAAACAGCAGTCAGCAGCTCATGGAAGTGAGCCCGG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGCTGACTCCCAAACCTaGCTTCTTTCTCTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQADSQT*LLSLAH
Trigger: GTGGGCTAGAGAAAGAAGTCAGGTTTGGGAGTCAGC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACGGATGTCGCTAATCTaGCCGATGAGCTCCTCGCGT +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQERMSLI*PMSSSR
Trigger: ACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCGGCGGAATTCCTTCATaGTCTCGGGCTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTGGIPS*SRACHR
Trigger: TCTGTGACAAGCCCGAGAGCATGAAGGAATTCCGCC...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGACGGATCCAGCTGCATaGCTGAGTTTTGAGTACACA +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGTDPAA*LSFEYT
Trigger: TGTGTACTCAAAACTCAGGCATGCAGCTGGATCCGT...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACCCCTGTCCTTCCCATaGAGCCAGATGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEPLSFP*SQMTTV
Trigger: CACAGTGGTCATCTGGCTGCATGGGAAGGACAGGGG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCCTGTGCAAAGTCCATaGAAAGTCTGTGCACCGGGC +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHPVQSP*KVCAPG
Trigger: GCCCGGTGCACAGACTTTGCATGGACTTTGCACAGG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGGGACAAGCTGGAAGATaGAGAGTTTCTGCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGGQAGR*RVSAEV
Trigger: AACCTCAGCAGAAACTCTCCATCTTCCAGCTTGTCC...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACTGACAGCGCATGGCTaGAAACACCATCCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQELTAHG*KHHPGG
Trigger: TCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGTTCCTTTGCCACTCTTaGGCTCCCTTCAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGFLCHS*APFKAK
Trigger: CTTTGCTTTGAAGGGAGCCCAAGAGTGGCAAAGGAA...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAGGGGAGGCTCTCTCCTaGCACCGAGGAACTGGAGCT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPGEALS*HRGTGA
Trigger: AGCTCCAGTTCCTCGGTGCCAGGAGAGAGCCTCCCC...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGTTCTGAGGCTGGTGTaGTACCCACACCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQVLRLV*YPHHPC
Trigger: GCAGGGGTGGTGTGGGTACCACACCAGCCTCAGAAC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCCAAGCCAAGTGCTCATaGGGACTTCTGCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVQAKCS*GLLPRW
Trigger: CCATCTGGGCAGAAGTCCCCATGAGCACTTGGCTTG...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCTGCACACGATGGAAATaGAACCTGTGCAAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTCTRWK*NLCKVH
Trigger: ATGGACTTTGCACAGGTTCCATTTCCATCGTGTGCA...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGGGTGTCTGCACACGATaGAAATGGAACCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGGVCTR*KWNLCK
Trigger: TTTGCACAGGTTCCATTTCCATCGTGTGCAGACACC...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp TGCCCACCTGGTGACCCTAGTGGAAAAGCTCACCAGTaGGCACACACAACTTCCAATCAGCTTTTGGATGCC +
Preference number: 4 (lower is better)
Translates to: CPPGDPSGKAHQ*AHTTSNQLLDA
Trigger: GGCATCCAAAAGCTGATTGGAAGTTGTGTGTGCCAACTGGTGAGCTTTTCCACTAGGGTCACCAGGTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp GTGGGTTCTCCATACCCATACCAGTGTTGGCCTGCTTaGGACAATGTCAACTCTCCAGACAACAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: VGSPYPYQCWPA*DNVNSPDNRHS
Trigger: GGAGTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGGGTATGGAGAACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCAGTGGAGCGGGTTCTaGGGCTGGTGTGGTACCCAC +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFQWSGF*GWCGTH
Trigger: GTGGGTACCACACCAGCCTCAGAACCCGCTCCACTG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAGAAGCCCCGACCACCTaGTCATCAACTATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPEAPTT*SSTMAR
Trigger: TCTTGCCATAGTTGATGATCAGGTGGTCGGGGCTTC...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAGCTCCATGGTGTTCTaGGTCCCTAGCGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQSSMVF*VPSDGG
Trigger: CCCACCATCGCTAGGGACTCAGAACACCATGGAGCT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACAGTTTCAGGCTGCAGTaGGCTGTGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHSFRLQ*AVITPL
Trigger: CAGTGGTGTGATCACAGCTCACTGCAGCCTGAAACT...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAACCAGTTACCGGACTaGGACAGGTGCATGGACCCC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQNQLPD*DRCMDP
Trigger: GGGGTCCATGCACCTGTCGCAGTCCGGTAACTGGTT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATGCCATTCCTGGATGTaGTTACACAGAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPCHSWM*LHRAGC
Trigger: GCAGCCAGCTCTGTGTAAGCACATCCAGGAATGGCA...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAGCCCGTTCCAAGACATaGATTCTGAGGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEARSKT*ILREVC
Trigger: GCACACCTCCCTCAGAATGCATGTCTTGGAACGGGC...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGGGTTGCCTGGTACATaGTTTCTGAAGGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVGLPGT*FLKGRA
Trigger: TGCTCTCCCCTTCAGAAAGCATGTACCAGGCAACCC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCAACAGGATGGATGTTaGTGCAGTCCCAGCTGGACT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVQQDGC*CSPSWT
Trigger: AGTCCAGCTGGGACTGCAGCAACATCCATCCTGTTG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTCTCTGCAGTGGGTGTaGGTGGGAAGGATGAGTCTG +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWSLQWV*VGRMSL
Trigger: CAGACTCATCCTTCCCACCCACACCCACTGCAGAGA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACTGTCTGACAGCGCATaGCTGGAAACACCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQELSDSA*LETPSR
Trigger: CCTGGATGGTGTTTCCAGCCATGCGCTGTCAGACAG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGGAGGATTCTGGAGATaGCTCACTGATGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVGGFWR*LTDVAG
Trigger: ACCAGCGACATCAGTGAGCCATCTCCAGAATCCTCC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGCTGGCACCGAGGAACTaGAGCTGCTCTGAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQLAPRN*SCSESH
Trigger: ATGGCTCTCAGAGCAGCTCCAGTTCCTCGGTGCCAG...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTACAGCACCTGGTCGCTaGCACTGGGGAGGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPTAPGR*HWGGSL
Trigger: GAGAGAGCCTCCCCAGTGCCAGCGACCAGGTGCTGT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGTGCTGGTGGTCCTCATaGGGGGCCAGTGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKCWWSS*GASGAG
Trigger: ACCCGCTCCACTGGCCCCCCATGAGGACCACCAGCA...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGCTCATGGCTTTTATATaGCCCTGCTGGGCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQLMAFI*PCWALA
Trigger: CGCCAGGGCCCAGCAGGGCCATATAAAAGCCATGAG...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCCCAGCCACTCCTCATaGCTTTTATATGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHPSHSS*LLYGPA
Trigger: AGCAGGGCCATATAAAAGCCATGAGGAGTGGCTGGG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAAGAGCTGGGTATGTCTaGAGGAAGGGGCAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPRAGYV*RKGQKV
Trigger: CACCTTTTGCCCCTTCCTCCAGACATACCCAGCTCT...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGTCCCTCTCCTGCACTTaGCACAGCATTACACAAAAT +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGSLSCT*HSITQN
Trigger: ATTTTGTGTAATGCTGTGCCAAGTGCAGGAGAGGGA...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTGAGACGCCCATGTTCTaGGTGGCTGCCCGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCIETPMF*VAARGA
Trigger: TGCCCCTCGGGCAGCCACCCAGAACATGGGCGTCTC...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATTGGTTCTCCCACGCTaGCTGTTAGGGGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPLVLPR*LLGEKS
Trigger: GCTCTTTTCCCCTAACAGCCAGCGTGGGAGAACCAA...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CGAGGATTTGTATTCGTGCAGCCTGAACTGAAGCACACTGACGCTCCTCCAGGTAGGCCTGTTCTTGGCTaGGCTCCAGAATCAAAGACT +
Preference number: 4 (lower is better)
Translates to: RGFVFVQPELKHTDAPPGRPVLG*APESKT
Trigger: AGTCTTTGATTCTGGAGCCCAGCCAAGAACAGGCCT...ACCTGGAGGAGCGTCAGTGTGCTTCAGTTCAGGCTGCACGAATACAAATCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTCCATCCTGCCTCAATaGTTCCTTTGCCACTCTTGG +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVSILPQ*FLCHSW
Trigger: CCAAGAGTGGCAAAGGAATCATTGAGGCAGGATGGA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGGATACAACACCATCATaGCAGTTCAGAACACCAAGA +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGDTTPS*QFRTPR
Trigger: TCTTGGTGTTCTGAACTGTCATGATGGTGTTGTATC...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGAGAACTCAGAGAAAATaGGGGCAACACAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGRTQRK*GQHREQ
Trigger: CTGCTCCCTGTGTTGCCCTCATTTTCTCTGAGTTCT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGAGGCACAGCAAAGGTTaGAGCAACTTAATGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGRHSKG*SNLMKV
Trigger: GACTTTCATTAAGTTGCTTCAACCTTTGCTGTGCCT...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCACAAAGGTCAGGTCTaGCCAGGAAGCCCCGACCAC +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLHKGQV*PGSPDH
Trigger: GTGGTCGGGGCTTCCTGGTCAGACCTGACCTTTGTG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGTTAGCTTCAGCAGCTaGGGCTGTGGTTTTGTAGTA +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQVSFSS*GCGFVV
Trigger: TACTACAAAACCACAGCCTCAGCTGCTGAAGCTAAC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGTGCCTTCCAATGGCATaGCCACGGAAGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQCLPMA*PRKENS
Trigger: GCTGTTCTCCTTCCGTGGTCATGCCATTGGAAGGCA...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCACAATGGTAGAGAAGTaGCAAGACCTGAAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTTMVEK*QDLKVL
Trigger: CAGGACCTTCAGGTCTTGTCACTTCTCTACCATTGT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCCTGAAGAACTGTCTTTaGTGTTGGACACTGAGATTT +
Preference number: 4 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTLKNCL*CWTLRF
Trigger: AAATCTCAGTGTCCAACATCAAAGACAGTTCTTCAG...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCAAGGCATCTGCAGGTaGGCCACAGCTAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFQGICR*ATARTW
Trigger: CCACGTCCTAGCTGTGGCTCACCTGCAGATGCCTTG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCACTGCCCGCAAAGTCCTaGACCGCCACGCCATACTTT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPLPAKS*TATPYF
Trigger: AAAGTATGGCGTGGCGGTGCAGGACTTTGCGGGCAG...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTGGTCAATAATCTGGTaGATGAACTCGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTWSIIW*MNSVEL
Trigger: CAGCTCCACCGAGTTCATGCACCAGATTATTGACCA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTCCGCGCTGTTTGTTTaGTGGCAAACACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWSALFV*WQTPVW
Trigger: CCACACAGGTGTTTGCCAGCAAACAAACAGCGCGGA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAGTGAAGAGGGCAGGTaGTCACGTGGAGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQSEEGR*SRGAQR
Trigger: TCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAGTGGGCGTGGTGGCATaGACCTGTACTACCAGCTAC +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPVGVVA*TCTTSY
Trigger: GTAGCTGGTAGTACAGGTGCATGCCACCACGCCCAC...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGTGGGGTCTGGCAACTaGAGAACACTCAGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWVGSGN*RTLSSE
Trigger: TTCTGAGCTGAGTGTTCTGCAGTTGCCAGACCCCAC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCAAAGCCAAGAAGCACTaGCCTAAGCTTTGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTKAKKH*PKLWAD
Trigger: ATCAGCCCAAAGCTTAGGGCAGTGCTTCTTGGCTTT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGAACCATGATGTCTTCTaGCTCCAGGAGCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWNHDVF*LQEPGD
Trigger: ATCCCCAGGCTCCTGGAGCCAGAAGACATCATGGTT...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGCCCCCTTGCAGGACCTaGTCAATAATCTGGTGCATG +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWPPCRT*SIIWCM
Trigger: CATGCACCAGATTATTGACCAGGTCCTGCAAGGGGG...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTGGCATATAGCCCTCTaGCTCTTCGAGATCCATTTC +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTWHIAL*LFEIHF
Trigger: GAAATGGATCTCGAAGAGCCAGAGGGCTATATGCCA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTGTGAACCTGCAATGTaGGGTGTGCTAAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVCEPAM*GVLRSR
Trigger: CCTGGATCTTAGCACACCCCACATTGCAGGTTCACA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAGCTGGGGCTTGGCCTaGGGTGCCCACCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISWGLA*GAHPLS
Trigger: AGAAAGAGGGTGGGCACCCCAGGCCAAGCCCCAGCT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAAAGAAACGTGATTCCTaGAGTAAGAGCGACGCTGGT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQKKRDS*SKSDAG
Trigger: ACCAGCGTCGCTCTTACTCCAGGAATCACGTTTCTT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTTTCCATGGGGCTCTTaGCCTTCCAGATGGAATCAC +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHFPWGS*PSRWNH
Trigger: GTGATTCCATCTGGAAGGCCAAGAGCCCCATGGAAA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACTGGTCTTGAATTCCTaGCCTCAAGCGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQELVLNS*PQAILL
Trigger: CAGGAGGATCGCTTGAGGCCAGGAATTCAAGACCAG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTCGGCGGGGAATGCAGTaGAGACCCCCAGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSRRGMQ*RPPGRC
Trigger: ACACCTTCCTGGGGGTCTCCACTGCATTCCCCGCCG...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGTATTCCCAGCATTGTaGGGTCTGGCAACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHVFPAL*GLATAE
Trigger: TTCTGCAGTTGCCAGACCCCACAATGCTGGGAATAC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAATGTTGCTCCAGCCCTaGCTGGGAGGAACTGCTTGC +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPMLLQP*LGGTAC
Trigger: GCAAGCAGTTCCTCCCAGCCAGGGCTGGAGCAACAT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGGTGCGATTGAGGCCGTaGATTGTTGAGGCATGTGTA +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGVRLRP*IVEACV
Trigger: TACACATGCCTCAACAATCCACGGCCTCAATCGCAC...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp GGGAGCTCATTAATTAGCTCATTTTCCATGGGGCTCTaGGCCTTCCAGATGGAATCACTCCAAGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GSSLISSFSMGL*AFQMESLQAPS
Trigger: GCTGGGAGCTTGGAGTGATTCCATCTGGAAGGCCAAGAGCCCCATGGAAAATGAGCTAATTAATGAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp GAGTATAGACCAGGGTCTCTGGATATGGTCCTACAGTaGTGCATTGCACAGAGGCACTTGGCTAAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: EYRPGSLDMVLQ*CIAQRHLAKEG
Trigger: GCCCTCTTTAGCCAAGTGCCTCTGTGCAATGCACAACTGTAGGACCATATCCAGAGACCCTGGTCTATACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp CAGCTAGGACGTGGGTTCTCCATACCCATACCAGTGTaGGCCTGCTTTGGACAATGTCAACTCTCCAGACAA +
Preference number: 4 (lower is better)
Translates to: QLGRGFSIPIPV*ACFGQCQLSRQ
Trigger: TTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGGGTATGGAGAACCCACGTCCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGCAGAAGGAGTTTCTTTaGTGCGAACAAAAGTGGATT +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGQKEFL*CEQKWI
Trigger: AATCCACTTTTGTTCGCATCAAAGAAACTCCTTCTG...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCATTTTCTCCTGGGGGTaGAAGAGAGTGACTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTIFSWG*KRVTFF
Trigger: GAAGAAAGTCACTCTCTTTCACCCCCAGGAGAAAAT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCAAGCAGCCCTTCATCTaGGAGGTAAGAAACTCAAGT +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTKQPFI*EVRNSS
Trigger: ACTTGAGTTTCTTACCTCTCAGATGAAGGGCTGCTT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGCGCTGGTATGTCAAATaGCAAGCTGTTGCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWRWYVK*QAVAAV
Trigger: GACAGCTGCAACAGCTTGTCATTTGACATACCAGCG...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCAATCCTCCTCTACTGTaGCAGCAAGCCAGTAGATGT +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVNPPLL*QQASRC
Trigger: ACATCTACTGGCTTGCTGTCACAGTAGAGGAGGATT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGGTGAGACATGGGGCTaGAGACCAGGGCATTTATTG +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQGETWG*RPGHLL
Trigger: CAATAAATGCCCTGGTCTTCAGCCCCATGTCTCACC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGAAATCGGAGCTCATGTaGAAGCATTCTTGTCATACA +
Preference number: 4 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGKSELM*KHSCHT
Trigger: TGTATGACAAGAATGCTTTCACATGAGCTCCGATTT...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTTTCAGAAGCCTTTTTaGGTCGTTACTCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVFQKPF*VVTRGR
Trigger: CCTTCCCCGAGTAACGACTCAAAAAGGCTTCTGAAA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACAGCACCACTGTGAGTaGCATAGGCAGCATCTTATG +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEQHHCE*HRQHLM
Trigger: CATAAGATGCTGCCTATGTCACTCACAGTGGTGCTG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTCAACTTGCAGGTTCTaGACTCGGATGTCGCTAATC +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVSTCRF*TRMSLI
Trigger: GATTAGCGACATCCGAGTGCAGAACCTGCAAGTTGA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGGCCACAACCGAAAAATACGATaGGACGAGGATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: HYKANQWVSSTRCEVPGHNRKIR*DEDLYS
Trigger: CGAATACAAATCCTCGTCGCATCGTATTTTTCGGTT...GTGGCCTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCGAACCAAAGAAGGGTTaGCATCTGCTATTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTEPKKG*HLLFLL
Trigger: CAGCAGAAATAGCAGATGGCAACCCTTCTTTGGTTC...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTGCCACGCTCCTCTCTaGAGTGGGTGTGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSCHAPL*SGCGWE
Trigger: TTCCCACCCACACCCACTGCAGAGAGGAGCGTGGCA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGGGACAGGTTCTTACTaGAGAAAGGATCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVGTGSY*RKDPCR
Trigger: CCTACAAGGATCCTTTCTGCAGTAAGAACCTGTCCC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGATAAGCCTCCAAAACTaGAGCCAGGGGAACCTCATA +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGISLQN*SQGNLI
Trigger: TATGAGGTTCCCCTGGCTGCAGTTTTGGAGGCTTAT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTCCTCCCTGGATTCTaGCATTCCTGGATGTGCTTA +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVFLPGF*HSWMCL
Trigger: TAAGCACATCCAGGAATGGCAGAATCCAGGGAGGAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGTAACCATAACACACTaGTGGGCTTGGGAGTCAACA +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVVTITH*WAWEST
Trigger: TGTTGACTCCCAAGCCCAGCAGTGTGTTATGGTTAC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTGGGACAGAACAACCTaGTATGTGGTGATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHWDRTT*YVVMVP
Trigger: TGGAACCATCACCACATAGCAGGTTGTTCTGTCCCA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTGTTTTCCAAGGAAATaGCTGATGAGAGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVCFPRK*LMRARR
Trigger: GCGCCTTGCTCTCATCAGGCATTTCCTTGGAAAACA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTACTGATGGCTGTCCATaGGGTCATTCTCTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVTDGCP*GHSLWS
Trigger: AGACCAAAGAGAATGACCCCATGGACAGCCATCAGT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGCTAACATCCAGTTGTaGGAAGAGCAGCAAGCAGTA +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVANIQL*EEQQAV
Trigger: TACTGCTTGCTGCTCTTCCCACAACTGGATGTTAGC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGCTTGGAGGAAAACGTaGCAGCTCTCTCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLAWRKT*QLSPQL
Trigger: CAGCTGGGGAGAGAGCTGCCACGTTTTCCTCCAAGC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGGCCCTGCTGGGCCCTaGCGATCTGGTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFGPAGP*RSGLKI
Trigger: GATTTTCAAACCAGATCGCCAGGGCCCAGCAGGGCC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGTTTATATGGCCCTGCTaGGCCCTGGCGATCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQFIWPC*ALAIWF
Trigger: AAACCAGATCGCCAGGGCCCAGCAGGGCCATATAAA...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGAAATGATTCACATTTaGGTTGGCTCTTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQEMIHI*VGSSQA
Trigger: AGCCTGGGAAGAGCCAACCCAAATGTGAATCATTTC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCGCCCATGTTCTGGGTaGCTGCCCGAGGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHRPCSG*LPEGQQ
Trigger: TTGCTGCCCCTCGGGCAGCCACCCAGAACATGGGCG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAACAACTGCCTTCCAATaGCATGACCACGGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQETTAFQ*HDHGRR
Trigger: TCTCCTTCCGTGGTCATGCCATTGGAAGGCAGTTGT...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTGCAGTCTCATTTCCTaGCTGAGAAGGTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWCSLIS*LRRSRD
Trigger: ATCTCGGGACCTTCTCAGCCAGGAAATGAGACTGCA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACCAGATGGCAGCTGCTaGCCCAAGACGTTAAATCTT +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEPDGSC*PKTLNL
Trigger: AAGATTTAACGTCTTGGGCCAGCAGCTGCCATCTGG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAAGGCGCAAGATCTGTaGAGCTCAAGGGGATGCTTG +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQKAQDL*SSRGCL
Trigger: CAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGAGAAAAGGGGGCTGCTaGGCATCCTACAACTTCATA +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGRKGGC*ASYNFI
Trigger: TATGAAGTTGTAGGATGCCCAGCAGCCCCCTTTTCT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCACTGCCCTAAGCTTTaGGCTGATATACAGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVHCPKL*ADIQRY
Trigger: GTACCTCTGTATATCAGCCCAAAGCTTAGGGCAGTG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTCTGGAGATGGCTCACTaGTGTCGCTGGTCTTACCTG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPLEMAH*CRWSYL
Trigger: CAGGTAAGACCAGCGACATCAGTGAGCCATCTCCAG...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGTCCCATGCAGCCAGATaGCCACTGTGCTCCTACTCC +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKSHAAR*PLCSYS
Trigger: GGAGTAGGAGCACAGTGGTCATCTGGCTGCATGGGA...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGGCATTTATTGGCTCTaGGGTCCCCTGTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPGIYWL*GPLSFP
Trigger: TGGGAAGGACAGGGGACCTCAGAGCCAATAAATGCC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGGTATACTGAACACATaGGCCTGTTTCTTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVGILNT*ACFFPH
Trigger: ATGAGGGAAGAAACAGGCTCATGTGTTCAGTATACC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCACCTGCCTCATCCTCCTaGGTAGCTGGGACTATAAGT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPPASSS*VAGTIS
Trigger: ACTTATAGTCCCAGCTACTCAGGAGGATGAGGCAGG...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAAGAGTGTCCTGCTTCTaGGCCTTGGTGGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPRVSCF*ALVGEH
Trigger: ATGTTCTCCCACCAAGGCTCAGAAGCAGGACACTCT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTCTTTTGACCCACACCTaGCCAAGCTCACCCCATGCC +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSLLTHT*PSSPHA
Trigger: GGCATGGGGTGAGCTTGGTCAGGTGTGGGTCAAAAG...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGTTAATTGGAGGCCCTaGAGAACTGTCTTTGATGTT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQVNWRP*RTVFDV
Trigger: AACATCAAAGACAGTTCTTCAGGGCCTCCAATTAAC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACAAACGGCTCCGATTCTaGGTAGAATTTCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHKRLRF*VEFQKP
Trigger: AGGCTTCTGAAATTCTACTCAGAATCGGAGCCGTTT...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGCTTCTAGAGGTGGGTTaGACTTTTCTAGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: DGITRQTSGSAPPGVKCQLLEVG*TFLDVD
Trigger: ATCTACATCTAGAAAAGTGCAACCCACCTCTAGAAG...CTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTTTCTCGTTTTCCTCTaGACCCACGCCAACAGGGCC +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLFLVFL*THANRA
Trigger: GGCCCTGTTGGCGTGGGTGCAGAGGAAAACGAGAAA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCATTACCTGGGCCCCCTTaGAGGACCTGGTCAATAATC +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPLPGPP*RTWSII
Trigger: GATTATTGACCAGGTCCTGCAAGGGGGCCCAGGTAA...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGATTCTGAGGGAGGTGTaGACCAAAGCTTTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQILREV*TKALVG
Trigger: GCCCACTAAAGCTTTGGTGCACACCTCCCTCAGAAT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCTAAAACCACATGCCTaGAGAGGGGAGGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLLKPHA*RGEATE
Trigger: CTCTGTGGCCTCCCCTCTGCAGGCATGTGGTTTTAG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCAGGATGGATGTTGCTaGAGTCCCAGCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFQDGCC*SPSWTQ
Trigger: CTGAGTCCAGCTGGGACTGCAGCAACATCCATCCTG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTATGTATCCCTCTCCTaGACTTGGCACAGCATTACA +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHYVSLS*TWHSIT
Trigger: TGTAATGCTGTGCCAAGTGCAGGAGAGGGATACATA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCATGTGAGCCACTACTGTaGCTAGCCAGTTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPCEPLL*LASFLF
Trigger: AAACAGAAAACTGGCTAGGCACAGTAGTGGCTCACA...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTGGAAATGGAACCTGTaGAAAGTCCATGCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTWKWNL*KVHAKS
Trigger: AGACTTTGCATGGACTTTGCACAGGTTCCATTTCCA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTATGAGCTCCTCGCGTTaGAACCAGTCCCACTCGTGT +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLMSSSR*NQSHSC
Trigger: ACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCAT...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAAGCTGTTGGCCTTCCTaGTTAATATTCGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQSCWPS*LIFGFF
Trigger: GAAGAAACCGAATATTAACCAGGAAGGCCAACAGCT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAATTTCACCTTCCTCCCTaGATTCTGCCATTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEFHLPP*ILPFLD
Trigger: ATCCAGGAATGGCAGAATCCAGGGAGGAAGGTGAAA...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAATTTTTCTCAGGACATTaGTGTGCCCAGTGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQFFSGH*CAQWKF
Trigger: AAACTTCCACTGGGCACACCAATGTCCTGAGAAAAA...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTTAGAGGCCAGATTTTaGCTGTCATCGACTCAGATG +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHLEARF*LSSTQM
Trigger: CATCTGAGTCGATGACAGCCAAAATCTGGCCTCTAA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTTAGCTCATTTTCCATaGGGCTCTTGGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWLAHFP*GSWPSR
Trigger: TCTGGAAGGCCAAGAGCCCCATGGAAAATGAGCTAA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGTCCAAGCTCAGAGCTaGGTATGTCTGGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLVQAQS*VCLEEG
Trigger: CCCTTCCTCCAGACATACCCAGCTCTGAGCTTGGAC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCCATAGACTATATCTTTaGGGAGGCAGGAGATCTAAG +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTHRLYL*GGRRSK
Trigger: CTTAGATCTCCTGCCTCCCCAAAGATATAGTCTATG...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCCTGCTTCTGAGCCTTaGTGGGAGAACATCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFPASEP*WENISP
Trigger: TGGGGAGATGTTCTCCCACCAAGGCTCAGAAGCAGG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGCCCTCATCAGTTGGATaGGACAGAACAACCTGCTAT +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWPSSVG*DRTTCY
Trigger: ATAGCAGGTTGTTCTGTCCCATCCAACTGATGAGGG...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAAAAATTAGGTGGGCGTaGTGGCATGCACCTGTACTA +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEKIRWA*WHAPVL
Trigger: TAGTACAGGTGCATGCCACCACGCCCACCTAATTTT...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGGATTGGAGAGAGGTTaGAAGAAGCTATGGTACACT +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVGLERG*KKLWYT
Trigger: AGTGTACCATAGCTTCTTCCAACCTCTCTCCAATCC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACCATTCTGGCACAGCATaGGCTTGTAGAGAATACACA +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHHSGTA*ACREYT
Trigger: TGTGTATTCTCTACAAGCCCATGCTGTGCCAGAATG...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTTAAGGGATCCTTGTTaGAATGCAAACGGCTCCGAT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVLRDPC*NANGSD
Trigger: ATCGGAGCCGTTTGCATTCCAACAAGGATCCCTTAA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp GTTGGCCACGTTCAACAGAGAATCCGCGCTGTTTGTTaGCTGGCAAACACCTGTGTGGACTACTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: VGHVQQRIRAVC*LANTCVDYLFL
Trigger: AAGAAACAAGTAGTCCACACAGGTGTTTGCCAGCAAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp CAATGTTGGCCACGTTCAACAGAGAATCCGCGCTGTTaGTTTGCTGGCAAACACCTGTGTGGACTACTTGTT +
Preference number: 4 (lower is better)
Translates to: QCWPRSTENPRC*FAGKHLCGLLV
Trigger: AACAAGTAGTCCACACAGGTGTTTGCCAGCAAACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp CAAGTTCTAAACACAAAGAAGCCAGTATTCCCAGCATaGTGGGGTCTGGCAACTGCAGAACACTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QVLNTKKPVFPA*WGLATAEHSAQ
Trigger: CTGAGCTGAGTGTTCTGCAGTTGCCAGACCCCACAATGCTGGGAATACTGGCTTCTTTGTGTTTAGAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCTTTTGTCTCATGAGGTaGAGGAACTTTGTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTFCLMR*RNFVES
Trigger: GCTTTCAACAAAGTTCCTTCACCTCATGAGACAAAA...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTGCATGCCTGAGTTTTaGGTACACAGCCAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVCMPEF*VHSQRK
Trigger: TTTTCTTTGGCTGTGTACTCAAAACTCAGGCATGCA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGCCTGGCGATCTGGTTTaGAAATCATGGTTCTATCTC +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWPGDLV*KSWFYL
Trigger: GAGATAGAACCATGATTTTCAAACCAGATCGCCAGG...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAGAAACCCATTACAAGTaGCCACAAAGAATGCCCGTT +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEETHYK*PQRMPV
Trigger: AACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTC...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTGCAGAGGTTTTTCTaGACAAGGTCTAGACCCATA +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVLQRFF*TRSRPI
Trigger: TATGGGTCTAGACCTTGTTCAGAAAAACCTCTGCAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTAAGAAATTTCCCATaGAGGCCCAGCACAAGGTTT +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVLRNFP*RPSTRF
Trigger: AAACCTTGTGCTGGGCCTTCATGGGAAATTTCTTAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCTGTTTCTTCCCTCATaGAACCCCATGAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVLFLPS*NPMKIG
Trigger: TCCTATTTTCATGGGGTTTCATGAGGGAAGAAACAG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGATGCTGTGTCAGCAGTaGTTATGCAATGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQMLCQQ*LCNVGE
Trigger: TTCCCCGACATTGCATAATCACTGCTGACACAGCAT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAGTCTTTCACCGATATTaGCACGCTCCTCTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPVFHRY*HAPLCS
Trigger: ACTGCAGAGAGGAGCGTGGCAATATCGGTGAAAGAC...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGTGCAGGGCATCCTGTaGGATGCTGAAAGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSVQGIL*DAESLL
Trigger: GAGAAGGCTTTCAGCATCGCACAGGATGCCCTGCAC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTTCTTTGGTCTCCCTTTaGTGGTGGTCCTCATGGGGG +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISLVSL*WWSSWG
Trigger: CCCCCATGAGGACCACCAGCAAAGGGAGACCAAAGA...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGTGGGGTGGTTTGTCCTaGAGACTTCCACATCCATTT +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQWGGLS*RLPHPF
Trigger: AAATGGATGTGGAAGTCTGCAGGACAAACCACCCCA...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAGCAAAAGGTGTCCTTTaGCAGTCAAGCCAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPAKGVL*QSSQVL
Trigger: GAGCACTTGGCTTGACTGGCAAAGGACACCTTTTGC...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGAAAGATACAGGTGTCTaGACACGATGGAAATGGAAC +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGKDTGV*TRWKWN
Trigger: GTTCCATTTCCATCGTGTGCAGACACCTGTATCTTT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTCTATGTTCCCAGTTCTaGTACTTACTAGTTCACGCT +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVLCSQF*YLLVHA
Trigger: AGCGTGAACTAGTAAGTAGCAGAACTGGGAACATAG...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGATAGACTGCTCGTCTaGTGTGTCAACCATGATGTC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQDRLLV*CVNHDV
Trigger: GACATCATGGTTGACACACCAGACGAGCAGTCTATC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAAAAGACTTTGGAGGGTaGTGGGTGGCTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPKDFGG*WVAGFM
Trigger: CATGAAACCAGCCACCCACCACCCTCCAAAGTCTTT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCACAGACAAAGACTTTaGAGGGTGGTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCIHRQRL*RVVGGW
Trigger: CCAGCCACCCACCACCCTCCAAAGTCTTTGTCTGTG...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCACTTTGTTGAAAGCCTaGCTGGTAGAAGCAAAATCT +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTTLLKA*LVEAKS
Trigger: AGATTTTGCTTCTACCAGCCAGGCTTTCAACAAAGT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACTCCTCGCCCACACCCTaGAGGTCATCGTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHSSPTP*RSSSSP
Trigger: GGGAGAAGACGATGACCTCCAGGGTGTGGGCGAGGA...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGTGCTTACACAGAGCTaGCTGCTCGGATTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLVLTQS*LLGFPL
Trigger: TAGGGGAAATCCGAGCAGCCAGCTCTGTGTAAGCAC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAAAAAAGAGCACACAGTaGCTCTCAACACAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPKKSTQ*LSTQLS
Trigger: TGAAAGCTGTGTTGAGAGCCACTGTGTGCTCTTTTT...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTTATAAGGGTTGCCTaGTACATGCTTTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVFIRVA*YMLSEG
Trigger: CCCTTCAGAAAGCATGTACCAGGCAACCCTTATAAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAAAAATTTACAAGCAATaGGGTGGTTTGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQKIYKQ*GGLSCR
Trigger: TCTGCAGGACAAACCACCCCATTGCTTGTAAATTTT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTCACAGCTCAACAGGATaGATGTTGCTGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPHSSTG*MLLQSQ
Trigger: CTGGGACTGCAGCAACATCCATCCTGTTGAGCTGTG...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGCTTCTGAGCCTTGGTaGGAGAACATCTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFASEPW*ENISPQ
Trigger: TTGTGGGGAGATGTTCTCCCACCAAGGCTCAGAAGC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAGATACCAGGCTGACTaGAAGCTCCCACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCIRYQAD*KLPHSP
Trigger: TGGGCTGTGTGGGAGCTTCCAGTCAGCCTGGTATCT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCACTTGTGTCTCATGTTTaGTTCTCCCACGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPLVSHV*FSHAGC
Trigger: ACAGCCAGCGTGGGAGAACCAAACATGAGACACAAG...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAAGGTCATCTGAGGATTaGACACTTCCTGGTGCTACA +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPRSSED*TLPGAT
Trigger: TGTAGCACCAGGAAGTGTTCAATCCTCAGATGACCT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAGTTCATCCAGCGTGTaGACCTGCAATGTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISSSSV*TCNVGC
Trigger: ACACCCCACATTGCAGGTTCACACGCTGGATGAACT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAATGCAGGAATGGAACTaGTGGAAAAGTGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPMQEWN*WKSEQG
Trigger: TCCCTGCTCACTTTTCCATCAGTTCCATTCCTGCAT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTTTCGAACAGTCTGTaGCTTACAGAGATCAACAAC +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVFSNSL*LTEINN
Trigger: GTTGTTGATCTCTGTAAGTCACAGACTGTTCGAAAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGTCTCATTTCCTGGCTaGGAAGGTCCCGAGATACCA +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSVSFPG*EGPEIP
Trigger: TGGTATCTCGGGACCTTCTCAGCCAGGAAATGAGAC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGGAGACCAACCAGTTATaGATTCATCCAAGTAATTCG +
Preference number: 4 (lower is better)
Translates to: KVRESEWHQKSQPARLGGETNQL*IHPSNS
Trigger: CGAATTACTTGGATGAATTCATAACTGGTTGGTCTC...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCCCCAAAATAAAACAATaGTCACCACCCACTACAATA +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTPKIKQ*SPPTTI
Trigger: TATTGTAGTGGGTGGTGATCATTGTTTTATTTTGGG...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGTAAAGGTCCTCTTCTaGACATTTTCCCTCTCAACT +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWVKVLF*TFSLST
Trigger: AGTTGAGAGGGAAAATGTGCAGAAGAGGACCTTTAC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACTTCTAGAGGTGGGTTaGACTTTTCTAGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPLLEVG*TFLDVD
Trigger: ATCTACATCTAGAAAAGTGCAACCCACCTCTAGAAG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTGAAGCACACTGACGCTCCTCCAGGTTGGGGGAAGATGGCATTACAAGGCAAAAAGCCATTAGGATTTTaGCATCTTGTATATCGACGA +
Preference number: 4 (lower is better)
Translates to: LKHTDAPPGWGKMALQGKKPLGF*HLVYRR
Trigger: TCGTCGATATACAAGATGGCAAAATCCTAATGGCTT...TTTGCCTTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR GCA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAATCTGCTATTTCTGCTaGATCAATGCTAACCAGTTT +
Preference number: 4 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQICYFC*INANQF
Trigger: AAACTGGTTAGCATTGATGCAGCAGAAATAGCAGAT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAAGACATGTCCATCCTaGCTCAATGATTCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQKTCPS*LNDSFA
Trigger: GGCAAAGGAATCATTGAGGCAGGATGGACATGTCTT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTACATCATATCCGGCTaGTGGACAAGCTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLYIISG*WTSCVR
Trigger: CCTGACACAGCTTGTCCAGCAGCCGGATATGATGTA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAGTGACCACAAAGAATaGCCGTTCCAAGACATGCAT +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQSDHKE*PFQDMH
Trigger: ATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GTGACCACAAAGAATGCCCGTTCCAAGACATGCATTCTGAGGGAGGTGTGCACCAAATTCTTCTGGCCATaGTGGAATTCTGTAAACTTG +
Preference number: 4 (lower is better)
Translates to: VTTKNARSKTCILREVCTKFFWP*WNSVNL
Trigger: CAAGTTTACAGAATTCCAGCATGGCCAGAAGAATTT...GGTGCACACCTCCCTCAGAATGCATGTCTTGGAACGGGCATTCTTTGTGGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAAATTTAGGCAAGGACTaGATGGTGCCCAGAGTTATA +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQENLGKD*MVPRVI
Trigger: TATAACTCTGGGCACCATGCAGTCCTTGCCTAAATT...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTTCCATGCAAAGTCTGTaGACCGGGCTCACTTCCATG +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISMQSL*TGLTSM
Trigger: CATGGAAGTGAGCCCGGTGCACAGACTTTGCATGGA...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTACCAAGCTCACCCCATaGCCTGTCTCACACACAATG +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSTKLTP*PVSHTM
Trigger: CATTGTGTGTGAGACAGGGCATGGGGTGAGCTTGGT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCTGGCTGGGAGGAACTaGTTGCTTGATGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLLAGRN*LLDVFS
Trigger: TGAGAACACATCAAGCAAGCAGTTCCTCCCAGCCAG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAAGGAAACATTCAATCTaGTCAATAGACCAGACTCCC +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQERKHSI*SIDQTP
Trigger: GGGAGTCTGGTCTATTGAGCAGATTGAATGTTTCCT...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGGGTGGACTTTCTCTTaGCCTTTTCATGCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPGWTFS*PFHAPL
Trigger: CAGAGGTGCATGAAAAGGCCAAGAGAAAGTCCACCC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCCTGGAGTCCAGGTCTaGCATATAGCCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHPGVQV*HIALWL
Trigger: GAGCCAGAGGGCTATATGCCAGACCTGGACTCCAGG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTATCATATCCGGCTGCTaGACAAGCTGTGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSIISGC*TSCVRE
Trigger: CTCCCTGACACAGCTTGTCCAGCAGCCGGATATGAT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTCAAACACCCACGCTTaGAGGAAAACGTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSSNTHA*RKTWQL
Trigger: GAGCTGCCACGTTTTCCTCCAAGCGTGGGTGTTTGA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTCTTGGCCTTCCAGATaGAATCACTCCAAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLSWPSR*NHSKLP
Trigger: TGGGAGCTTGGAGTGATTCCATCTGGAAGGCCAAGA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAGTACGGGAATCAGAATaGCATCAGAAATCTCAACCA +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEVRESE*HQKSQP
Trigger: TGGTTGAGATTTCTGATGCCATTCTGATTCCCGTAC...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGGCTGAACCTCAGAAATaGAGACGCCCATGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKAEPQK*RRPCSG
Trigger: CCCAGAACATGGGCGTCTCCATTTCTGAGGTTCAGC...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAAGTGTTGGCCTGCTTTaGACAATGTCAACTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPSVGLL*TMSTLQ
Trigger: CTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp AGTAAGAGCGACGCTGGTATGTCAAATGACAAGCTGTaGCAGCTGTCAAGGGTATTTCAGAAGGAATTGGGG +
Preference number: 4 (lower is better)
Translates to: SKSDAGMSNDKL*QLSRVFQKELG
Trigger: CCCCAATTCCTTCTGAAATACCCTTGACAGCTGCAACAGCTTGTCATTTGACATACCAGCGTCGCTCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp CAACTATGGCAAGATACAAACTTCGACGAGGCAATGTaGGCCACGTTCAACAGAGAATCCGCGCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QLWQDTNFDEAM*ATFNRESALFV
Trigger: AACAAACAGCGCGGATTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTGTCCATCTTAACTTaGGGCTCTGGCGAATCCTTC +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFLSILT*GSGESF
Trigger: GAAGGATTCGCCAGAGCCTCAAGTTAAGATGGACAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTGAAACCCACTGCTTaGAATGAGCAAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFLKPTA*NEQVLG
Trigger: GCCAAGGACTTGCTCATTTCAAGCAGTGGGTTTCAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAATCAAGATGGTATACTaGACACATGAGCCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQEIKMVY*THEPVS
Trigger: AGAAACAGGCTCATGTGTTCAGTATACCATCTTGAT...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACTTTCTGTTTCTTAAGTaGAGCAAGGGTGGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHFLFLK*SKGGKE
Trigger: TTCTTTACCACCCTTGCTTCACTTAAGAAACAGAAA...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCTTTTGTTGGAGAGATaGGCTCCATGGTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLLLLER*APWCSE
Trigger: CTCAGAACACCATGGAGCTCATCTCTCCAACAAAAG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTAACTCCAGAGGCTTCTaGAGTCCTTCTGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLNSRGF*SPSGEL
Trigger: TAACTCTCCAGAAGGACTTCAGAAGCCTCTGGAGTT...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACGGCTGCAGTGAGCTGTaGTCACACCACTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHGCSEL*SHHCTP
Trigger: TGGAGTACAGTGGTGTGATCACAGCTCACTGCAGCC...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAAAACCGAAAAATACGATaGGACGAGGATTTGTATTCG +
Preference number: 4 (lower is better)
Translates to: HMSTQHRLKALCMPVSQENRKIR*DEDLYS
Trigger: CGAATACAAATCCTCGTCGCATCGTATTTTTCGGTT...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGAGAAGGGTTGCCATCTaGTATTTCTGCTGCATCAAT +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQRRVAI*YFCCIN
Trigger: ATTGATGCAGCAGAAATAGCAGATGGCAACCCTTCT...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGTGAGAGAAGTATCTTaGAGAGGTTTTTCTGAACAA +
Preference number: 4 (lower is better)
Translates to: ARRKICGAQGDACVSCLVVREVS*RGFSEQ
Trigger: TTGTTCAGAAAAACCTCTGCAAGATACTTCTCTCAC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCAAAATATCAGTTGACTaGCAACCTGAACCAAATGAC +
Preference number: 4 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVKISVD*QPEPND
Trigger: GTCATTTGGTTCAGGTTGGCAGTCAACTGATATTTT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGTTCCAGATGGCAGCTaGTGGCCCAAGACGTTAAAT +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSVPDGS*WPKTLN
Trigger: ATTTAACGTCTTGGGCCAGCAGCTGCCATCTGGAAC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGGCGGCCATTTTGGTTaGAAATTTGCAACTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPGGHFG*KFATAV
Trigger: CACTGCAGTTGCAAATTTGCAACCAAAATGGCCGCC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGTGAGCTCCTTAATCTaGAAGAAGAGGATTATGTTC +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWVSSLI*KKRIMF
Trigger: GAACATAATCCTCTTCTTCCAGATTAAGGAGCTCAC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCACCTGGTCAATAATCTaGTGCATGAACTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFTWSII*CMNSVE
Trigger: CTCCACCGAGTTCATGCACCAGATTATTGACCAGGT...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGTCAGAGGAGGATTCTaGAATCTTCGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFVRGGF*NLRGFL
Trigger: CAGGAATCCTCGAAGATTCCAGAATCCTCCTCTGAC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGGATTCTGCCATTCCTaGATGTGCTTACACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLGFCHS*MCLHRA
Trigger: AGCTCTGTGTAAGCACATCCAGGAATGGCAGAATCC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTTACAAGCAATGGGGTaGTTTGTCCTGCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLLQAMG*FVLQTS
Trigger: GGAAGTCTGCAGGACAAACCACCCCATTGCTTGTAA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTACACACTGCTGGGCTTaGGAGTCAACAATCCTTAAG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPTHCWA*ESTILK
Trigger: CTTAAGGATTGTTGACTCCCAAGCCCAGCAGTGTGT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGCGCTGTTTGTTTGCTaGCAAACACCTGTGTGGACT +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSALFVC*QTPVWT
Trigger: AGTCCACACAGGTGTTTGCCAGCAAACAAACAGCGC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTCGACGAGGCAATGTTaGCCACGTTCAACAGAGAAT +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFSTRQC*PRSTEN
Trigger: ATTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTTACCCATACCAGTGTTaGCCTGCTTTGGACAATGTC +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPYPYQC*PALDNV
Trigger: GACATTGTCCAAAGCAGGCCAACACTGGTATGGGTA...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACGCCACAGCTAGGACGTaGGTTCTCCATACCCATACC +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHATART*VLHTHT
Trigger: GGTATGGGTATGGAGAACCCACGTCCTAGCTGTGGC...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp GAGTTAAAATCTAGCCTTTTCATTGTTCCTCGAGCATaGTCCAAGCTCAGAGCTGGGTATGTCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: ELKSSLFIVPRA*SKLRAGYVWRK
Trigger: CTTCCTCCAGACATACCCAGCTCTGAGCTTGGACAATGCTCGAGGAACAATGAAAAGGCTAGATTTTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCATCCTGTGCGATGCTaGAAGCCTTCTCTAGATTTT +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFHPVRC*KPSLDF
Trigger: AAAATCTAGAGAAGGCTTTCAGCATCGCACAGGATG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTGTGTCAGCCTCAAAGTaGACTGTTTTCTTGATCGGC +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSVSASK*TVFLIG
Trigger: GCCGATCAAGAAAACAGTTCACTTTGAGGCTGACAC...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTCTCAAGAAACAGAATaGGCCCCAGAGAAAACACGT +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLSQETE*APEKTR
Trigger: ACGTGTTTTCTCTGGGGCTCATTCTGTTTCTTGAGA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGCCCCTAAGCAACCTGTaGGATAACTCAAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKPLSNL*DNSNGV
Trigger: AACCCCATTTGAGTTATCTCACAGGTTGCTTAGGGG...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGAGGAACTGCTTGCTTaGTGTGTTCTCATCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPEELLA*CVLIKV
Trigger: AACCTTGATGAGAACACATCAAGCAAGCAGTTCCTC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAACTGCCTCAGATGCTaGCGTAATTTAAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPNCLRC*RNLRRP
Trigger: TGGTCTCCTTAAATTACGTCAGCATCTGAGGCAGTT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTCTGTCATCCAGATCTaGTGCGTTCCTCAACTGAAC +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSSVIQI*CVPQLN
Trigger: GTTCAGTTGAGGAACGCAGCAGATCTGGATGACAGA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGTCATCGACTCAGATGTaGTATGTAAATTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQSSTQM*YVNSSG
Trigger: GCCAGAAGAATTTACATAGCACATCTGAGTCGATGA...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACAGCCAGGGGACAAGCTaGAAGATGGAGAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHSQGTS*KMESFC
Trigger: GCAGAAACTCTCCATCTTCCAGCTTGTCCCCTGGCT...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCAGGTTAACCTTGATCTaGAAGGAATCGGCCATCACA +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFRLTLI*KESAIT
Trigger: TGTGATGGCCGATTCCTTCCAGATCAAGGTTAACCT...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTGGGCCCTGGCGATCTaGTTTGAAAATCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSWALAI*FENHGS
Trigger: AGAACCATGATTTTCAAACCAGATCGCCAGGGCCCA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGCTATGTAAATTCTTCTaGCCATGCTGGAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWLCKFF*PCWNSV
Trigger: TACAGAATTCCAGCATGGCCAGAAGAATTTACATAG...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTTCAAGGCGGCCATTTTaGTTGCAAATTTGCAACTGC +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSRRPF*LQICNC
Trigger: GCAGTTGCAAATTTGCAACCAAAATGGCCGCCTTGA...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCCACCCACTACAATATaGTCTGAACAATCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFPPTTI*SEQSPV
Trigger: GACAGGAGATTGTTCAGACCATATTGTAGTGGGTGG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp AGGGAACGACCATTTTTCCGTGTTCACAATTTGTCTTaGGCGGATAGTATCAGCACCACTGTGAGTGACATA +
Preference number: 4 (lower is better)
Translates to: RERPFFRVHNLS*ADSISTTVSDI
Trigger: TATGTCACTCACAGTGGTGCTGATACTATCCGCCAAAGACAAATTGTGAACACGGAAAAATGGTCGTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp TACAGTAGGGAACGACCATTTTTCCGTGTTCACAATTaGTCTTTGGCGGATAGTATCAGCACCACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: YSRERPFFRVHN*SLADSISTTVS
Trigger: ACTCACAGTGGTGCTGATACTATCCGCCAAAGACAAATTGTGAACACGGAAAAATGGTCGTTCCCTACTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAGTGAACTGTTTTCTTaGTCGGCAAAGAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISELFS*SAKSWT
Trigger: GGTCCAACTCTTTGCCGATCAAGAAAACAGTTCACT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTTCAGGTTTTGTCTCATaGGGTGAAGGAACTTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPSGFVS*GEGTLL
Trigger: CAACAAAGTTCCTTCACCTCATGAGACAAAACCTGA...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCAACAAGTTGTAATAGGTaGGAGAAGTATCTTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPTSCNR*EKYLAE
Trigger: CTCTGCAAGATACTTCTCTCACCTATTACAACTTGT...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGAGGCCGTGGATTGTTaGGGCATGTGTATATTTAAA +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPEAVDC*GMCIFK
Trigger: TTTAAATATACACATGCCTCAACAATCCACGGCCTC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCACTACAATATGGTCTaGACAATCTCCTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFHYNMV*TISCLQ
Trigger: TTGGAGACAGGAGATTGTTCAGACCATATTGTAGTG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTTCAGAACGAAGACTTTaGTCTCCTGTTCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISERRL*SPVQKE
Trigger: CTCCTTCTGAACAGGAGAGCAAAGTCTTCGTTCTGA...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCTCAGCAACCTCAACTaGCAAGACATGTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHLSNLN*QDMSIL
Trigger: CAGGATGGACATGTCTTGGCAGTTGAGGTTGCTGAG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTGTCATCCAGATCTGCTaGGTTCCTCAACTGAACATA +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCIVIQIC*VPQLNI
Trigger: TATGTTCAGTTGAGGAACGCAGCAGATCTGGATGAC...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTCAAATGACAAGCTGTTaGAGCTGTCAAGGGTATTTC +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLQMTSC*SCQGYF
Trigger: GAAATACCCTTGACAGCTGCAACAGCTTGTCATTTG...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTCCACCTGTCATTCTATaGTCAGCCACATTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPPPVIL*SATFLL
Trigger: TAACAGAAATGTGGCTGAGCATAGAATGACAGGTGG...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCTTTTCATGCACCTCTaGCTTTTTATCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFLFMHL*LFIHWC
Trigger: ACACCAGTGGATAAAAAGCCAGAGGTGCATGAAAAG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTCATAATGAGGACGGGTaGACTTTCTCTTGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSHNEDG*TFSWPF
Trigger: AAAAGGCCAAGAGAAAGTCCACCCGTCCTCATTATG...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACTGTGCTCCTACTCCATaGAGAAATCAGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHCAPTP*RNQSSS
Trigger: GGAGCTGCTCTGATTTCTCCATGGAGTAGGAGCACA...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCCAGCAGCTGAGGCTGTaGTTTTGTAGTAAACTTAAC +
Preference number: 4 (lower is better)
Translates to: FKETNFLLTALGSRFPRFQQLRL*FCSKLN
Trigger: GTTAAGTTTACTACAAAACCACAGCCTCAGCTGCTG...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAAACACACCAGCATTTaGCTTAAGGGATCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPKHTSI*LKGSLL
Trigger: CAACAAGGATCCCTTAAGCCAAATGCTGGTGTGTTT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGCTCCTGACTCATTTGTaGTTTTATAAGGGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKLLTHL*FYKGCL
Trigger: CAGGCAACCCTTATAAAATCACAAATGAGTCAGGAG...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTATTATCTGTACCTTTaGGCTTTCATTGATGCCAGG +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLYYLYL*AFIDAR
Trigger: CCTGGCATCAATGAAAGCTCAAAGGTACAGATAATA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTATGGGACACCATTTTTaGAACCACATGAGTACTCAG +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSMGHHF*NHMSTQ
Trigger: CTGAGTACTCATGTGGTTTCAAAAATGGTGTCCCAT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACAGAAGTGACAAGACCTaGAGGTCCTGTAGGACTCTT +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHRSDKT*RSCRTL
Trigger: AAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTCT...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCATGGCAAACACCTGTGTaGACTACTTGTTTCTTTATT +
Preference number: 4 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPWQTPV*TTCFFI
Trigger: AATAAAGAAACAAGTAGTCCACACAGGTGTTTGCCA...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTTTCACAATTTGTCTTTaGCGGATAGTATCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLFTICL*RIVSAP
Trigger: TGGTGCTGATACTATCCGCCAAAGACAAATTGTGAA...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp CTGAGTGTCAGGGATTTAAACAAATTAGCAGTGCGATaGAGGCCGTGGATTGTTGAGGCATGTGTATATTTA +
Preference number: 4 (lower is better)
Translates to: LSVRDLNKLAVR*RPWIVEACVYL
Trigger: TAAATATACACATGCCTCAACAATCCACGGCCTCAATCGCACTGCTAATTTGTTTAAATCCCTGACACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTTACAGGAAGAAGACTaGGAATTATTGTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSLQEED*ELLFVP
Trigger: GGGCACAAACAATAATTCTCAGTCTTCTTCCTGTAA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGGTGAAAGATAGAGACTaGGACCACCAAAATAAAGAG +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKVKDRD*DHQNKE
Trigger: CTCTTTATTTTGGTGGTCTCAGTCTCTATCTTTCAC...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGAGCCATGATGGATTCTaGCATTTTCGTAAGACACAT +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKSHDGF*HFRKTH
Trigger: ATGTGTCTTACGAAAATGTCAGAATCCATCATGGCT...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAAGCCATTAGGATTTTaGCATCTTGTATATCGACGA +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPKPLGF*HLVYRR
Trigger: TCGTCGATATACAAGATGGCAAAATCCTAATGGCTT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGATACAGAGGTACACTTaGTTTAAGCAAATAGGCCAC +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKIQRYT*FKQIGH
Trigger: GTGGCCTATTTGCTTAAAGCAAGTGTACCTCTGTAT...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTTCCCGTTCTCCTTTCTaGATGATAAAATGGAGGATT +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISRSPF*MIKWRI
Trigger: AATCCTCCATTTTATCATCCAGAAAGGAGAACGGGA...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCTTCTCCTGAGCTGTTaGCCTTCCTGGTTAATATTC +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHLLLSC*PSWLIF
Trigger: GAATATTAACCAGGAAGGCCAACAGCTCAGGAGAAG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGTTTATGGATCAAGATaGTATACTGAACACATGAGC +
Preference number: 4 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPVYGSR*YTEHMS
Trigger: GCTCATGTGTTCAGTATACCATCTTGATCCATAAAC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAATTCTGACTTTTGTTaGAGAGATGAGCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCINSDFC*RDELHG
Trigger: ACCATGGAGCTCATCTCTCCAACAAAAGTCAGAATT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR TCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGAGGAACTTCTTTATCTaGATCGAAAATATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKRNFFI*IENIFG
Trigger: GCCGAAGATATTTTCGATTCAGATAAAGAAGTTCCT...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTTATTTTTCTGTCCTGTaGTTTAGCTTCCTTTCCGAA +
Preference number: 4 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSYFSVL*FSFLSE
Trigger: TTCGGAAAGGAAGCTAAAGCACAGGACAGAAAAATA...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGAAAAATAATAATCCCTaGCTCAGAGACCAACCAGTT +
Preference number: 4 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKKNNNP*LRDQPV
Trigger: AACTGGTTGGTCTCTGAGGCAGGGATTATTATTTTT...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCTAGATTTTCTCGTGTaGAATTTTCCAGGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHLDFLV*NFPGPV
Trigger: AACAGGCCCTGGAAAATTCCACACGAGAAAATCTAG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CCA 90 bp TCAAGAAACCCATTACAAGTGACCACAAAGAATGCCCGTTCCAAGACATGCATTAGTGAACTTTCTACGTaGTCCACATGTTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRNPLQVTTKNARSKTCISELST*STCFLF
Trigger: AAAAAGGAAACATGTGGACCACGTAGAAAGTTCACT...AATGCATGTCTTGGAACGGGCATTCTTTGTGGTCACTTGTAATGGGTTTCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR GCA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACGGTATAGTCAACGCTTaGTTCAAGAGGAAGGAAATA +
Preference number: 4 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHGIVNA*FKRKEI
Trigger: TATTTCCTTCCTCTTGAAGCAAGCGTTGACTATACC...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
3UTR CAA 72 bp CACATAATCTTTATTATCTGTACCTTTGAGCTTTCATaGATGCCAGGGAGCTCATTAATTAGCTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: HIIFIICTFELS*MPGSSLISSFS
Trigger: GGAAAATGAGCTAATTAATGAGCTCCCTGGCATCAATGAAAGCTCAAAGGTACAGATAATAAAGATTATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS TCA 90 bp GTGGAGCGGGTTCTGAGGCTGGTGTGGTACCCACACCACCCCTGCTaGGATACAGCACCTGGTCGCTGGCACTGGGGAGGCTCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VERVLRLVWYPHHPC*DTAPGRWHWGGSLL
Trigger: CAGGAGAGAGCCTCCCCAGTGCCAGCGACCAGGTGCTGTATCTCAGCAGGGGTGGTGTGGGTACCACACCAGCCTCAGAACCCGCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 90 bp TTCTGCACTCGGATGTCGCTAATCTGCCCGATGAGCTCCTCGCGTTaGAACCAGTCCCACTCGTGTGCAGCCATGAAGCGCGGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: FCTRMSLICPMSSSR*NQSHSCAAMKRGRE
Trigger: CTCCCGCCCGCGCTTCATGGCTGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCGAGTGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS CCA 90 bp CCCTCCCTTGTGAGTGCGAGAGACCCCACCACCCGGAACCCGGATTaGGGTGTGCTGCTCCGGGTTCTAACACATCTGCTACTGAGCACG +
Preference number: 5 (lower is better)
Translates to: PSLVSARDPTTRNPD*GVLLRVLTHLLLST
Trigger: CGTGCTCAGTAGCAGATGTGTTAGAACCCGGAGCAGCACACCCCAATCCGGGTTCCGGGTGGTGGGGTCTCTCGCACTCACAAGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556454.1
CDS GCA 90 bp CATGGCCCTTGCCCAAGGTACTCCTGGGAACTCAATACAGGCCATTaGCCGGGGCAACCTCCTGCTTTCGGCACCCAAGGCCCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: HGPCPRYSWELNTGH*PGQPPAFGTQGPWL
Trigger: AAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 90 bp CCGAGGAACTGGAGCTGCTCTGAGAGCCATCGGCCTCCTCCTCCCTaGAGTCCAGGTCTGGCATATAGCCCTCTGGCTCTTCGAGATCCA +
Preference number: 5 (lower is better)
Translates to: PRNWSCSESHRPPPP*SPGLAYSPLALRDP
Trigger: TGGATCTCGAAGAGCCAGAGGGCTATATGCCAGACCTGGACTCCAGGGAGGAGGAGGCCGATGGCTCTCAGAGCAGCTCCAGTTCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 90 bp AAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTGGCTaGGCTCCAGAATCAAAGACTCCCCGTGGAGGCCCACCAAGGACA +
Preference number: 5 (lower is better)
Translates to: KCQATLMGKWRPVLG*APESKTPRGGPPRT
Trigger: TGTCCTTGGTGGGCCTCCACGGGGAGTCTTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS CCA 90 bp TGTGAAGTGCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTaGCTGGGCTCCAGAATCAAAGACTCCCCGTGGAGGCCCACCAAG +
Preference number: 5 (lower is better)
Translates to: CEVPGHAHGEVEACS*LGSRIKDSPWRPTK
Trigger: CTTGGTGGGCCTCCACGGGGAGTCTTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS GCA 90 bp CTCTGTCCCCTACGGGTCAGCAATCACGTGCCACTTCATGGCCCTTaGCCAAGGTACTCCTGGGAACTCAATACAGGCCATTGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: LCPLRVSNHVPLHGP*PRYSWELNTGHCPG
Trigger: CCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGGGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 90 bp TCCATGGGGTCATTCTCTTTGGTCTCCCTTTGCTGGTGGTCCTCATaGGGGGCCAGTGGAGCGGGTTCTGAGGCTGGTGTGGTACCCACA +
Preference number: 5 (lower is better)
Translates to: SMGSFSLVSLCWWSS*GASGAGSEAGVVPT
Trigger: TGTGGGTACCACACCAGCCTCAGAACCCGCTCCACTGGCCCCCCATGAGGACCACCAGCAAAGGGAGACCAAAGAGAATGACCCCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 90 bp TCAGCTCCACCAGGTGTGAAGTGCCAGGCCACGCTCATGGGGAAGTaGAGGCCTGTTCTTGGCTGGGCTCCAGAATCAAAGACTCCCCGT +
Preference number: 5 (lower is better)
Translates to: SAPPGVKCQATLMGK*RPVLGWAPESKTPR
Trigger: ACGGGGAGTCTTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACACCTGGTGGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR CAA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCGATGAGCTCCTCGCGTaGGAACCAGTCCCACTCGTG +
Preference number: 5 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTDELLA*EPVPLV
Trigger: CACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATC...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS GCA 90 bp CTGCTACTGAGCACGTGCCACTGTCCATCGGACCTTGACTCATGTTaGACCTCTGTCTCTGAACGTGATCCTTCTGGGTGCGCGCGGGGT +
Preference number: 5 (lower is better)
Translates to: LLLSTCHCPSDLDSC*TSVSERDPSGCARG
Trigger: ACCCCGCGCGCACCCAGAAGGATCACGTTCAGAGACAGAGGTGCAACATGAGTCAAGGTCCGATGGACAGTGGCACGTGCTCAGTAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556454.1
CDS CCA 90 bp CCTTCCTCTGGTCTTTCACCGATATTGCCACGCTCCTCTCTGCAGTaGGTGTGGGTGGGAAGGATGAGTCTGAGTCTGTGCCCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PSSGLSPILPRSSLQ*VWVGRMSLSLCPLS
Trigger: GCTCAGGGGGCACAGACTCAGACTCATCCTTCCCACCCACACCCACTGCAGAGAGGAGCGTGGCAATATCGGTGAAAGACCAGAGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000555336.6
CDS CCA 90 bp AGGCTTTCGGGGTGGAGTGACTTGCCCAAGGCCATGCAATTAACTTaGCGACAGAGAGGGCGCCTAGGCCAGGTCTCCTGGGACACCTTT +
Preference number: 5 (lower is better)
Translates to: RLSGWSDLPKAMQLT*RQRGRLGQVSWDTF
Trigger: AAAGGTGTCCCAGGAGACCTGGCCTAGGCGCCCTCTCTGTCGCCAAGTTAATTGCATGGCCTTGGGCAAGTCACTCCACCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS CCA 90 bp TCCGGCTGCTGGACAAGCTGTGTCAGGGAGTCACTCTGCGGGCTGTaGCTCCCCAGTGACATGGCTTCTCCTGAGCTGTTGGCTTTCATA +
Preference number: 5 (lower is better)
Translates to: SGCWTSCVRESLCGL*LPSDMASPELLAFI
Trigger: TATGAAAGCCAACAGCTCAGGAGAAGCCATGTCACTGGGGAGCCACAGCCCGCAGAGTGACTCCCTGACACAGCTTGTCCAGCAGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556441.1
CDS-3UTR CAA 90 bp GACGCTCCTCCAGGTTGGGGGAAGATGGCATTACAAGGCAAACCAGTGGGTCAGGATGAGCTCCTCGCGTaGGAACCAGTCCCACTCGTG +
Preference number: 5 (lower is better)
Translates to: DAPPGWGKMALQGKPVGQDELLA*EPVPLV
Trigger: CACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATC...CTGACCCACTGGTTTGCCTTGTAATGCCATCTTCCCCCAACCTGGAGGAGCGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS GCA 90 bp GTACTCCTGGGAACTCAATACAGGCCATTGCCCGGGGCAACCTCCTaGTTTCGGCACCCAAGGCCCTTGGCTTTGAATCGGGAGGTAACA +
Preference number: 5 (lower is better)
Translates to: VLLGTQYRPLPGATS*FRHPRPLALNREVT
Trigger: TGTTACCTCCCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 90 bp GTCAGCAATCACGTGCCACTTCATGGCCCTTGCCCAAGGTACTCCTaGGAACTCAATACAGGCCATTGCCCGGGGCAACCTCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: VSNHVPLHGPCPRYS*ELNTGHCPGQPPAF
Trigger: GAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS-3UTR CAA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCGGTCTTTCACCGATATaGCCACGCTCCTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTGLSPI*PRSSLQ
Trigger: CTGCAGAGAGGAGCGTGGCAATATCGGTGAAAGACC...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGCTCTTTGGTCTCCCTTaGCTGGTGGTCCTCATGGGG +
Preference number: 5 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGLFGLP*LVVLMG
Trigger: CCCCATGAGGACCACCAGCAAAGGGAGACCAAAGAG...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS CCA 90 bp GTTTTCCTCTGCACCCACGCCAACAGGGCCTTGATAGCCTTCCTCTaGTCTTTCACCGATATTGCCACGCTCCTCTCTGCAGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: VFLCTHANRALIAFL*SFTDIATLLSAVGV
Trigger: CACACCCACTGCAGAGAGGAGCGTGGCAATATCGGTGAAAGACCAGAGGAAGGCTATCAAGGCCCTGTTGGCGTGGGTGCAGAGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000555336.6
CDS CCA 90 bp GCGATGTCTCTGTCCCCTACGGGTCAGCAATCACGTGCCACTTCATaGCCCTTGCCCAAGGTACTCCTGGGAACTCAATACAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: AMSLSPTGQQSRATS*PLPKVLLGTQYRPL
Trigger: CAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGGGGACAGAGACATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGTCAACAGGATGGATGTaGCTGCAGTCCCAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGSTGWM*LQSQLD
Trigger: GTCCAGCTGGGACTGCAGCAACATCCATCCTGTTGA...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGCAGCCCCCTCATCAGTaGGATGGGACAGAACAACCT +
Preference number: 5 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGQPPHQ*DGTEQP
Trigger: AGGTTGTTCTGTCCCATCCAACTGATGAGGGGGCTG...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS GCA 90 bp TTTTCCCTCTCAACTTGCAGGTTCTGCACTCGGATGTCGCTAATCTaGCCGATGAGCTCCTCGCGTTGGAACCAGTCCCACTCGTGTGCA +
Preference number: 5 (lower is better)
Translates to: FSLSTCRFCTRMSLI*PMSSSRWNQSHSCA
Trigger: TGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCGAGTGCAGAACCTGCAAGTTGAGAGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS GCA 90 bp CTGACAGCGCATGGCTGGAAACACCATCCAGGCGGAATTCCTTCATaGTCTCGGGCTTGTCACAGACAAAGACTTTGGAGGGTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: LTAHGWKHHPGGIPS*SRACHRQRLWRVVG
Trigger: ACCCACCACCCTCCAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS GCA 90 bp TGGGGTGTGCTGCTCCGGGTTCTAACACATCTGCTACTGAGCACGTaGCACTGTCCATCGGACCTTGACTCATGTTGCACCTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: WGVLLRVLTHLLLST*HCPSDLDSCCTSVS
Trigger: AGAGACAGAGGTGCAACATGAGTCAAGGTCCGATGGACAGTGGCACGTGCTCAGTAGCAGATGTGTTAGAACCCGGAGCAGCACACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556454.1
CDS CCA 90 bp ATGCAATTAACTTGGCGACAGAGAGGGCGCCTAGGCCAGGTCTCCTaGGACACCTTTCTTGATGCCACAGTGCTCTCAGAGAGTGACACG +
Preference number: 5 (lower is better)
Translates to: MQLTWRQRGRLGQVS*DTFLDATVLSESDT
Trigger: CGTGTCACTCTCTGAGAGCACTGTGGCATCAAGAAAGGTGTCCCAGGAGACCTGGCCTAGGCGCCCTCTCTGTCGCCAAGTTAATTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS GCA 90 bp TCATGGCATTGCGATGTCTCTGTCCCCTACGGGTCAGCAATCACGTaGCACTTCATGGCCCTTGCCCAAGGTACTCCTGGGAACTCAATA +
Preference number: 5 (lower is better)
Translates to: SWHCDVSVPYGSAIT*HFMALAQGTPGNSI
Trigger: TATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGGGGACAGAGACATCGCAATGCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 90 bp TCAATAATCTGGTGCATGAACTCGGTGGAGCTGTCTGACAGCGCATaGCTGGAAACACCATCCAGGCGGAATTCCTTCATGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: SIIWCMNSVELSDSA*LETPSRRNSFMLSG
Trigger: GCCCGAGAGCATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAGACAGCTCCACCGAGTTCATGCACCAGATTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGCACGCCAACAGGGCCTaGATAGCCTTCCTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGHANRA*IAFLWS
Trigger: AGACCAGAGGAAGGCTATCAAGGCCCTGTTGGCGTG...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCGGTGAAGGAACTTTGTaGAAAGCCTGGCTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTGEGTL*KAWLVE
Trigger: TTCTACCAGCCAGGCTTTCAACAAAGTTCCTTCACC...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCAGTTACCGGACTGCGACAGGTGCATGGACCCCAGCACCTTCTCTCAAACACCCATCCTCGTCAGGTTTaGTCTCATGAGGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: PVTGLRQVHGPQHLLSNTHPRQV*SHEVKE
Trigger: TTCCTTCACCTCATGAGACAAAACCTGACGAGGATG...GGTGTTTGAGAGAAGGTGCTGGGGTCCATGCACCTGTCGCAGTCCGGTAACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAGCGATGCGACGAGGATTaGTATTCGTGCAGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: DGITRQTSGSAPPGVKCQRCDED*YSCSLN
Trigger: GTTCAGGCTGCACGAATACAAATCCTCGTCGCATCG...CTGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS TCA 90 bp CAGGACCTGGTCAATAATCTGGTGCATGAACTCGGTGGAGCTGTCTaGCAGCGCATGGCTGGAAACACCATCCAGGCGGAATTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: QDLVNNLVHELGGAV*QRMAGNTIQAEFLH
Trigger: ATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAGACAGCTCCACCGAGTTCATGCACCAGATTATTGACCAGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS GCA 90 bp TACACCAGGAGCCACAGGAAGAGAATAAAATACATCATATCCGGCTaGTGGACAAGCTGTGTCAGGGAGTCACTCTGCGGGCTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: YTRSHRKRIKYIISG*WTSCVRESLCGLWL
Trigger: GAGCCACAGCCCGCAGAGTGACTCCCTGACACAGCTTGTCCAGCAGCCGGATATGATGTATTTTATTCTCTTCCTGTGGCTCCTGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298912.9
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS CCA 90 bp TTCCTTCATGCTCTCGGGCTTGTCACAGACAAAGACTTTGGAGGGTaGTGGGTGGCTGGTTTCATGGTTAACAGTGTAGGTACGCTCCCC +
Preference number: 5 (lower is better)
Translates to: FLHALGLVTDKDFGG*WVAGFMVNSVGTLP
Trigger: GGGGAGCGTACCTACACTGTTAACCATGAAACCAGCCACCCACCACCCTCCAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGTCACAGACAAAGACTTaGGAGGGTGGTGGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGSQTKT*EGGGWL
Trigger: CAGCCACCCACCACCCTCCAAAGTCTTTGTCTGTGA...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGTGGATTGGAGAGAGGTaGGAAGAAGCTATGGTACAC +
Preference number: 5 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGWIGER*EEAMVH
Trigger: GTGTACCATAGCTTCTTCCAACCTCTCTCCAATCCA...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS TCA 90 bp TTCATGCACCTCTGGCTTTTTATCCACTGGTGTCTCTTCTGGGGCTaGAGGACAGCCTTCAGCTTCTTCTCCGGAGTCCTGATGAGGTTC +
Preference number: 5 (lower is better)
Translates to: FMHLWLFIHWCLFWG*RTAFSFFSGVLMRF
Trigger: GAACCTCATCAGGACTCCGGAGAAGAAGCTGAAGGCTGTCCTTCAGCCCCAGAAGAGACACCAGTGGATAAAAAGCCAGAGGTGCATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS-3UTR CAA 90 bp CAGCCTGAACTGAAGCACACTGACGCTCCTCCAGGTTGGGGGAAGATGGCATTAATTTTCCCTCTCAACTaGCAGGTTCTGCACTCGGAT +
Preference number: 5 (lower is better)
Translates to: QPELKHTDAPPGWGKMALIFPLN*QVLHSD
Trigger: ATCCGAGTGCAGAACCTGCAAGTTGAGAGGGAAAAT...TAATGCCATCTTCCCCCAACCTGGAGGAGCGTCAGTGTGCTTCAGTTCAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGATGTCACCAGCGACCTaGTCAGAGGAGGATTCTGGA +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGMSPAT*SEEDSG
Trigger: TCCAGAATCCTCCTCTGACAAGGTCGCTGGTGACAT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGCCTGCTAACATCCAGTaGTGGGAAGAGCAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGPANIQ*WEEQQA
Trigger: TGCTTGCTGCTCTTCCCACAACTGGATGTTAGCAGG...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGACCTTTGAGCTTTCATaGATGCCAGGGAGCTCATTA +
Preference number: 5 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGTFELS*MPGSSL
Trigger: TAATGAGCTCCCTGGCATCAATGAAAGCTCAAAGGT...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGTCTCAACCAGCACGCTaGGGAGGGGCTAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKSQPAR*GGARGG
Trigger: CCCTCCCCTAGCCCCTCCCAAGCGTGCTGGTTGAGA...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGGCAAAAGGTGTCCTTaGCCAGTCAAGCCAAGTGCT +
Preference number: 5 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHGKRCP*PVKPSA
Trigger: AGCACTTGGCTTGACTGGCAAAGGACACCTTTTGCC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAATCCTACAGTTGTGCATaGCACAGAGGCACTTGGCTA +
Preference number: 5 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQSYSCA*HRGTWL
Trigger: TAGCCAAGTGCCTCTGTGCAATGCACAACTGTAGGA...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTGAGAATCCGCGCTGTTaGTTTGCTGGCAAACACCTG +
Preference number: 5 (lower is better)
Translates to: ARRKICGAQGDACVSCLVENPRC*FAGKHL
Trigger: CAGGTGTTTGCCAGCAAACAAACAGCGCGGATTCTC...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS TCA 90 bp TTCCTCAGCAACCTCAACTGCCAAGACATGTCCATCCTGCCTCAATaGTTCCTTTGCCACTCTTGGGCTCCCTTCAAAGCAAAGGGACAG +
Preference number: 5 (lower is better)
Translates to: FLSNLNCQDMSILPQ*FLCHSWAPFKAKGQ
Trigger: CTGTCCCTTTGCTTTGAAGGGAGCCCAAGAGTGGCAAAGGAATCATTGAGGCAGGATGGACATGTCTTGGCAGTTGAGGTTGCTGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS-3UTR CAA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCGAGTTTCTGCTGAGGTaGCCTGTGAGCTCCTTAATC +
Preference number: 5 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVEFLLR*PVSSLI
Trigger: GATTAAGGAGCTCACAGGCAACCTCAGCAGAAACTC...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTTGATCGGCAAAGAGTaGGACCTCCCGTTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: ARRKICGAQGDACVSCLVLIGKE*DLPFSF
Trigger: AAAGGAGAACGGGAGGTCCAACTCTTTGCCGATCAA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGATGGGGTCATTCTCTTaGGTCTCCCTTTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWMGSFS*VSLCWW
Trigger: CCACCAGCAAAGGGAGACCAAAGAGAATGACCCCAT...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGCTCAAACACCCACGCTaGGAGGAAAACGTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQLKHPR*EENVAA
Trigger: AGCTGCCACGTTTTCCTCCAAGCGTGGGTGTTTGAG...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAAAGCAATGGGGTGGTTaGTCCTGCAGACTTCCACAT +
Preference number: 5 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPKQWGG*SCRLPH
Trigger: ATGTGGAAGTCTGCAGGACAAACCACCCCATTGCTT...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGCCTCCAGGAGAGGCTaGGGGATTGGAATAGGAGGG +
Preference number: 5 (lower is better)
Translates to: FKETNFLLTALGSRFPRFASRRG*GIGIGG
Trigger: CCCTCCTATTCCAATCCCCAAGCCTCTCCTGGAGGC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTTTCGACGAGGCAATGTaGGCCACGTTCAACAGAGAA +
Preference number: 5 (lower is better)
Translates to: ARRKICGAQGDACVSCLVFDEAM*ATFNRE
Trigger: TTCTCTGTTGAACGTGGCCAACATTGCCTCGTCGAA...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTCTAAATACTCACGGGTGATGAGGCTGCCTGCTCAGCGGTCAGGACTCGGGCATGTGAAAGCATTCTaGTCATACAACTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: KSKYSRVMRLPAQRSGLGHVKAF*SYNCLP
Trigger: TGGAAGGCAGTTGTATGACAAGAATGCTTTCACATG...CCCGAGTCCTGACCGCTGAGCAGGCAGCCTCATCACCCGTGAGTATTTAGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAAGGCCTGAGTTAGATTaGAGACAGGGTAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQRPELD*RQGSSE
Trigger: TTCTGAGCTACCCTGTCTCAAATCTAACTCAGGCCT...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCACAGTGTTGGCCTGCTTaGGACAATGTCAACTCTCCA +
Preference number: 5 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPQCWPA*DNVNSP
Trigger: TGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTG...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTATTTTCCCTCTCAACTaGCAGGTTCTGCACTCGGAT +
Preference number: 5 (lower is better)
Translates to: ARRKICGAQGDACVSCLVIFPLN*QVLHSD
Trigger: ATCCGAGTGCAGAACCTGCAAGTTGAGAGGGAAAAT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAACGATGCGACGAGGATTaGTATTCGTGCAGCAGATTC +
Preference number: 5 (lower is better)
Translates to: HMSTQHRLKALCMPVSQERCDED*YSCSRF
Trigger: GAATCTGCTGCACGAATACAAATCCTCGTCGCATCG...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGTTTCCTCGGAGGTCCTCAACTGTCTGTAGAAGTGCCCCACCCAGAACCCAAGTATTTCAGAAGGAATaGGGGATGAGCTTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KFPRRSSTVCRSAPPRTQVFQKE*GMSLKV
Trigger: CACCTTCAAGCTCATCCCCAATTCCTTCTGAAATAC...TTGGGTTCTGGGTGGGGCACTTCTACAGACAGTTGAGGACCTCCGAGGAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTTTTCCATGGGGCTCTaGGCCTTCCAGATGGAATCA +
Preference number: 5 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWFSMGL*AFQMES
Trigger: TGATTCCATCTGGAAGGCCAAGAGCCCCATGGAAAA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGAAATTAGCAGTGCGATaGAGGCCGTGGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGKLAVR*RPWIVE
Trigger: CTCAACAATCCACGGCCTCAATCGCACTGCTAATTT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTAGGCGGCCATTTTGGTaGCAAATTTGCAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: ARRKICGAQGDACVSCLVRRPFW*QICNCS
Trigger: ACTGCAGTTGCAAATTTGCAACCAAAATGGCCGCCT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CAACCGAAAAATACGATGCGACGAGGATTTGTATTCGTGCAGCCTGAACTGAAGAGTGGAGGCCTGTTCTaGGCTGGGCTCCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: QPKNTMRRGFVFVQPELKSGGLF*AGLQNQ
Trigger: TTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACT...CTTCAGTTCAGGCTGCACGAATACAAATCCTCGTCGCATCGTATTTTTCGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS GCA 90 bp TGTTCCTTTTCCTCAGCAACCTCAACTGCCAAGACATGTCCATCCTaGCTCAATGATTCCTTTGCCACTCTTGGGCTCCCTTCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: CSFSSATSTAKTCPS*LNDSFATLGLPSKQ
Trigger: TTGCTTTGAAGGGAGCCCAAGAGTGGCAAAGGAATCATTGAGGCAGGATGGACATGTCTTGGCAGTTGAGGTTGCTGAGGAAAAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS-3UTR CAA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTTGTCCATCTTAACTaGAGGCTCTGGCGAATCCTT +
Preference number: 5 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVFVHLN*RLWRIL
Trigger: AAGGATTCGCCAGAGCCTCAAGTTAAGATGGACAAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCACGGGTGGACTTTCTCTaGGCCTTTTCATGCACCTCT +
Preference number: 5 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPRVDFL*AFSCTS
Trigger: AGAGGTGCATGAAAAGGCCAAGAGAAAGTCCACCCG...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGTTTAGAGGCCAGATTTaGGCTGTCATCGACTCAGAT +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGFRGQI*AVIDSD
Trigger: ATCTGAGTCGATGACAGCCAAAATCTGGCCTCTAAA...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCTTCAAGGCGGCCATTTaGGTTGCAAATTTGCAACTG +
Preference number: 5 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVFKAAI*VANLQL
Trigger: CAGTTGCAAATTTGCAACCAAAATGGCCGCCTTGAA...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAATGGAACCTGTGCAAAGTCCATGCAAAGTCTGTGCACCGGGCTCACTTCCAATTTCAGAAGCCTTTTaGAGTCGTTACTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: EMEPVQSPCKVCAPGSLPISEAF*SRYSGK
Trigger: CTTCCCCGAGTAACGACTCAAAAAGGCTTCTGAAAT...TGGAAGTGAGCCCGGTGCACAGACTTTGCATGGACTTTGCACAGGTTCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGCTTAAGGGATCCTTGTaGGAATGCAAACGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQLKGSL*ECKRLR
Trigger: TCGGAGCCGTTTGCATTCCAACAAGGATCCCTTAAG...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS TCA 90 bp AAGGAATCGGCCATCACAGTATTTTCTCCTGGGGGTGAAAGAGAGTaGCTTTCTTCATCGTGGCGGGCTGTACTCTCTAAAGCACCATTA +
Preference number: 5 (lower is better)
Translates to: KESAITVFSPGGERE*LSSSWRAVLSKAPL
Trigger: TAATGGTGCTTTAGAGAGTACAGCCCGCCACGATGAAGAAAGTCACTCTCTTTCACCCCCAGGAGAAAATACTGTGATGGCCGATTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS GCA 90 bp TTGCCACTCTTGGGCTCCCTTCAAAGCAAAGGGACAGGTTCTTACTaGAGAAAGGATCCTTGTAGGTGTCAGCCTCAAAGTGAACTGTTT +
Preference number: 5 (lower is better)
Translates to: LPLLGSLQSKGTGSY*RKDPCRCQPQSELF
Trigger: AAACAGTTCACTTTGAGGCTGACACCTACAAGGATCCTTTCTGCAGTAAGAACCTGTCCCTTTGCTTTGAAGGGAGCCCAAGAGTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 90 bp TTTATTATCCAGACACACGTATCAGAGCCTGCTAACATCCAGTTGTaGGAAGAGCAGCAAGCAGTACACCAGGAGCCACAGGAAGAGAAT +
Preference number: 5 (lower is better)
Translates to: FIIQTHVSEPANIQL*EEQQAVHQEPQEEN
Trigger: ATTCTCTTCCTGTGGCTCCTGGTGTACTGCTTGCTGCTCTTCCCACAACTGGATGTTAGCAGGCTCTGATACGTGTGTCTGGATAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298912.9
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS-3UTR CAA 90 bp AAAATCAGAGTGAAGAGGGCAGGTGCTCACGTGGAGCCCAAAGATACAGGTGTCACTTCTAGAGGTGGGTaGCACTTTTCTAGATGTAGA +
Preference number: 5 (lower is better)
Translates to: KIRVKRAGAHVEPKDTGVTSRGG*HFSRCR
Trigger: TCTACATCTAGAAAAGTGCAACCCACCTCTAGAAGT...GACACCTGTATCTTTGGGCTCCACGTGAGCACCTGCCCTCTTCACTCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AGATGGCATTACAAGGCAAACCAGTGGGTCAGCTCCACCAGGTGTGAAGTGCCAAAAGCCATTAGGATTTaGCCATCTTGTATATCGACG +
Preference number: 5 (lower is better)
Translates to: RWHYKANQWVSSTRCEVPKAIRI*PSCIST
Trigger: CGTCGATATACAAGATGGCAAAATCCTAATGGCTTT...TGGCACTTCACACCTGGTGGAGCTGACCCACTGGTTTGCCTTGTAATGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS-3UTR CAA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCTGGGGTCAATGGCCTaGATCACCGCCAGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHLGSMA*ITARKA
Trigger: GGCTTTCCTGGCGGTGATCAAGGCCATTGACCCCAG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGCCTCAATGATTCCTTaGCCACTCTTGGGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLASMIP*PLLGSL
Trigger: AAGGGAGCCCAAGAGTGGCAAAGGAATCATTGAGGC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGCTTTTTCTCAGGACATaGGTGTGCCCAGTGGAAGTT +
Preference number: 5 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQLFLRT*VCPVEV
Trigger: AACTTCCACTGGGCACACCAATGTCCTGAGAAAAAG...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGGAATTGGGGATGAGCTaGAAGGTGAGTAAGAATTCC +
Preference number: 5 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWELGMS*KVSKNS
Trigger: GGAATTCTTACTCACCTTCAAGCTCATCCCCAATTC...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGCCAGTATTCCCAGCATaGTGGGGTCTGGCAACTGCA +
Preference number: 5 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKPVFPA*WGLATA
Trigger: TGCAGTTGCCAGACCCCACAATGCTGGGAATACTGG...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGGAGGAACTGCTTGCTaGATGTGTTCTCATCAAGGT +
Preference number: 5 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQGGTAC*MCSHQG
Trigger: ACCTTGATGAGAACACATCAAGCAAGCAGTTCCTCC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGCCTGAAGAACTGTCTTaGATGTTGGACACTGAGATT +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGPEELS*MLDTEI
Trigger: AATCTCAGTGTCCAACATCAAAGACAGTTCTTCAGG...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CACCTGATCATCAACTATGGCAAGATACAAACTTCGACGAGGCAATGTTGGCCATGGCTTAAGGGATCCTaGTTGGAATGCAAACGGCTC +
Preference number: 5 (lower is better)
Translates to: HLIINYGKIQTSTRQCWPWLKGS*LECKRL
Trigger: GAGCCGTTTGCATTCCAACAAGGATCCCTTAAGCCA...TGGCCAACATTGCCTCGTCGAAGTTTGTATCTTGCCATAGTTGATGATCAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS CCA 90 bp TCTCCCTCCTCTAAAGCTTCTACAGTCATCAGGTTAACCTTGATCTaGAAGGAATCGGCCATCACAGTATTTTCTCCTGGGGGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: SPSSKASTVIRLTLI*KESAITVFSPGGER
Trigger: TCTTTCACCCCCAGGAGAAAATACTGTGATGGCCGATTCCTTCCAGATCAAGGTTAACCTGATGACTGTAGAAGCTTTAGAGGAGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS-3UTR CAA 90 bp AAGGTACGGGAATCAGAATGGCATCAGAAATCTCAACCAGCACGCTTGGGAGGGAAAGCCATTAGGATTTaGCCATCTTGTATATCGACG +
Preference number: 5 (lower is better)
Translates to: KVRESEWHQKSQPARLGGKAIRI*PSCIST
Trigger: CGTCGATATACAAGATGGCAAAATCCTAATGGCTTT...CCCTCCCAAGCGTGCTGGTTGAGATTTCTGATGCCATTCTGATTCCCGTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TCGTGGTCTCTACTTCTCCATTTTAATTACACTGCCCTCAGGCCTTCTCTACTTGTCATCAGGTTAACCTaGATCTGGAAGGAATCGGCC +
Preference number: 5 (lower is better)
Translates to: SWSLLLHFNYTALRPSLLVIRLT*IWKESA
Trigger: GGCCGATTCCTTCCAGATCAAGGTTAACCTGATGAC...AAGTAGAGAAGGCCTGAGGGCAGTGTAATTAAAATGGAGAAGTAGAGACCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CACATGAGTACTCAGCATAGGCTAAAAGCCCTGTGTATGCCCGTTTCCCAGGAATCAAATGACAAGCTGTaGCAGCTGTCAAGGGTATTT +
Preference number: 5 (lower is better)
Translates to: HMSTQHRLKALCMPVSQESNDKL*QLSRVF
Trigger: AAATACCCTTGACAGCTGCAACAGCTTGTCATTTGA...TTCCTGGGAAACGGGCATACACAGGGCTTTTAGCCTATGCTGAGTACTCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GCAAGGCGCAAGATCTGTGGAGCTCAAGGGGATGCTTGTGTCTCATGTTTGGTTACTTCCAATCAGCTTTaGGATGCCTCACTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: ARRKICGAQGDACVSCLVTSNQL*DASLLK
Trigger: TTTTAAGAGTGAGGCATCCAAAAGCTGATTGGAAGT...AACCAAACATGAGACACAAGCATCCCCTTGAGCTCCACAGATCTTGCGCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGATTGTTCCTCGAGCATaGTCCAAGCTCAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKIVPRA*SKLRAG
Trigger: CCCAGCTCTGAGCTTGGACAATGCTCGAGGAACAAT...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGATATGGTCCTACAGTaGTGCATTGCACAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPDMVLQ*CIAQRH
Trigger: GTGCCTCTGTGCAATGCACAACTGTAGGACCATATC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGCTGGGAGGAACTGCTaGCTTGATGTGTTCTCATCA +
Preference number: 5 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPAGRNC*LDVFSS
Trigger: TGATGAGAACACATCAAGCAAGCAGTTCCTCCCAGC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCATACCAGTGTTGGCCTGCTTTGGACAATGTCAACTCTCCAGACAACAGGCACGAGAATACACACCTATaGATTTTTGCTGGGGCTAAA +
Preference number: 5 (lower is better)
Translates to: PYQCWPALDNVNSPDNRHENTHL*IFAGAK
Trigger: TTTAGCCCCAGCAAAAATCAATAGGTGTGTATTCTC...GTGCCTGTTGTCTGGAGAGTTGACATTGTCCAAAGCAGGCCAACACTGGTATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGTTCACAATTTGTCTTaGGCGGATAGTATCAGCACC +
Preference number: 5 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQVHNLS*ADSIST
Trigger: GGTGCTGATACTATCCGCCAAAGACAAATTGTGAAC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CCCAATTTCCTACTCTGTGAAGTACGTGTTAGAGGTGCAGAGATGAGCAGCTGGTTCCGTGTTCACAATTaGTCTTTGGCGGATAGTATC +
Preference number: 5 (lower is better)
Translates to: PNFLLCEVRVRGAEMSSWFRVHN*SLADSI
Trigger: GATACTATCCGCCAAAGACAAATTGTGAACACGGAA...CCAGCTGCTCATCTCTGCACCTCTAACACGTACTTCACAGAGTAGGAAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS TCA 90 bp AGAAAGGATCCTTGTAGGTGTCAGCCTCAAAGTGAACTGTTTTCTTaGTCGGCAAAGAGTTGGACCTCCCGTTCTCCTTTCTGGATGATA +
Preference number: 5 (lower is better)
Translates to: RKDPCRCQPQSELFS*SAKSWTSRSPFWMI
Trigger: TATCATCCAGAAAGGAGAACGGGAGGTCCAACTCTTTGCCGATCAAGAAAACAGTTCACTTTGAGGCTGACACCTACAAGGATCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS GCA 90 bp GATAAGGTTCCAATCTGCTTGTCTTCTATCCAAAAGTATAGCTGTTaGATGCCAGTAATTTCAAAGCTCTGGGCTGGGGAGGAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: DKVPICLSSIQKYSC*MPVISKLWAGEEEG
Trigger: TCCTTCCTCCTCCCCAGCCCAGAGCTTTGAAATTACTGGCATGCAACAGCTATACTTTTGGATAGAAGACAAGCAGATTGGAACCTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTGTCAGAACGAAGACTTaGCTCTCCTGTTCAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPVRTKT*LSCSEG
Trigger: TCCTTCTGAACAGGAGAGCAAAGTCTTCGTTCTGAC...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTCATGCTCTCGGGCTaGTCACAGACAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: FKETNFLLTALGSRFPRFFMLSG*SQTKTL
Trigger: CAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACGCTTGTGTCTCATGTTaGGTTCTCCCACGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHACVSC*VLPRWL
Trigger: CAGCCAGCGTGGGAGAACCAAACATGAGACACAAGC...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCATACCCATACCAGTGTaGGCCTGCTTTGGACAATGT +
Preference number: 5 (lower is better)
Translates to: FKETNFLLTALGSRFPRFIPIPV*ACFGQC
Trigger: ACATTGTCCAAAGCAGGCCAACACTGGTATGGGTAT...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS TCA 90 bp AGCGAGGGGCAGGGTGGGATTAAACATCTGCCACAGTCTACATACTaGATGATAAATACCCACATGATGGTCTTCTTTAAAAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SEGQGGIKHLPQSTY*MINTHMMVFFKKLS
Trigger: GGACAGCTTTTTAAAGAAGACCATCATGTGGGTATTTATCATTCAGTATGTAGACTGTGGCAGATGTTTAATCCCACCCTGCCCCTCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS GCA 90 bp AAAAACTTAAGTGCTTTCGCTATGTTGTTCAACCGAAAAATACGATaGGACGAGGATTTGTATTCGTGCAGCAGATTCCGCCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: KNLSAFAMLFNRKIR*DEDLYSCSRFRPDR
Trigger: CCTGTCTGGGCGGAATCTGCTGCACGAATACAAATCCTCGTCGCATCGTATTTTTCGGTTGAACAACATAGCGAAAGCACTTAAGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000298912.9
ENST00000555336.6
ENST00000555615.1
CDS-3UTR CAA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACATCCGCGCTGTTTGTTaGCTGGCAAACACCTGTGTG +
Preference number: 5 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHIRAVC*LANTCV
Trigger: CACACAGGTGTTTGCCAGCAAACAAACAGCGCGGAT...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp CTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTACTTCAAACATTCATCTAGCTCAAGGGGATGCTaGTGTCTCATGTTTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LLTALGSRFPRFYFKHSSSSRGC*CLMFGS
Trigger: AGAACCAAACATGAGACACAAGCATCCCCTTGAGCT...AGATGAATGTTTGAAGTAGAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAGACAAGAATGTTTTTaGGCATGTTGCTCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPRQECF*ACCSSP
Trigger: AGGGCTGGAGCAACATGCCAAAAAACATTCTTGTCT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTTTCTTCTAGGGGGTTaGCTATGTTTTCCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: FKETNFLLTALGSRFPRFFLLGG*LCFPGL
Trigger: CAAACCTGGAAAACATAGCAAACCCCCTAGAAGAAA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AACACTCAGCTCAGAAACTCTGATAACTTTTGTGGGCTCTTGGGGAACCAGCAGGCAAACATAAGAGAGTaGAAAGTGGTTACTTCTAAG +
Preference number: 5 (lower is better)
Translates to: NTQLRNSDNFCGLLGNQQANIRE*KVVTSK
Trigger: CTTAGAAGTAACCACTTTCAACTCTCTTATGTTTGC...CTGCTGGTTCCCCAAGAGCCCACAAAAGTTATCAGAGTTTCTGAGCTGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp AGCAGGATCATAGCTCACAGTAACCTCAAAGTCATGGGCTCAAACAATTCTCCTAGGTATAGTCAACGCTaGCTTCAAGAGGAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: SRIIAHSNLKVMGSNNSPRYSQR*LQEEGN
Trigger: ATTTCCTTCCTCTTGAAGCAAGCGTTGACTATACCT...AGGAGAATTGTTTGAGCCCATGACTTTGAGGTTACTGTGAGCTATGATCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCTCAGAAGGAGTTTCTTaGATGCGAACAAAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: FKETNFLLTALGSRFPRFSEGVS*MRTKVD
Trigger: ATCCACTTTTGTTCGCATCAAAGAAACTCCTTCTGA...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAGTGTTTGAAAATAACAGTCCTATGTTCCCAGTTCTGCTACTTACTAGTTCACCTATGTTTTCCAGGTTaGGGGATTCCTGGGACTGAT +
Preference number: 5 (lower is better)
Translates to: ECLKITVLCSQFCYLLVHLCFPG*GIPGTD
Trigger: ATCAGTCCCAGGAATCCCCAAACCTGGAAAACATAG...GTGAACTAGTAAGTAGCAGAACTGGGAACATAGGACTGTTATTTTCAAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp GAAGTGACAAGACCTGAAGGTCCTGTAGGACTCTTAAGAAAAATCAGAGTGAAGGATGGGACACCATTTTaGAAACCACATGAGTACTCA +
Preference number: 5 (lower is better)
Translates to: EVTRPEGPVGLLRKIRVKDGTPF*KPHEYS
Trigger: TGAGTACTCATGTGGTTTCAAAAATGGTGTCCCATC...CTTCACTCTGATTTTTCTTAAGAGTCCTACAGGACCTTCAGGTCTTGTCACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS-3UTR CAA 90 bp TTTAAGGAGACCAATTTCCTTCTAACAGCCCTAGGAAGCAGATTTCCCAGGTTCGAACTGTCTTTGATGTaGGACACTGAGATTTTACTG +
Preference number: 5 (lower is better)
Translates to: FKETNFLLTALGSRFPRFELSLM*DTEILL
Trigger: CAGTAAAATCTCAGTGTCCAACATCAAAGACAGTTC...GAACCTGGGAAATCTGCTTCCTAGGGCTGTTAGAAGGAAATTGGTCTCCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS GCA 90 bp AACCGGATATCCGATCGGACTGTGCTTAATGATAAGGTTCCAATCTaGTTGTCTTCTATCCAAAAGTATAGCTGTTGCATGCCAGTAATT +
Preference number: 5 (lower is better)
Translates to: NRISDRTVLNDKVPI*LSSIQKYSCCMPVI
Trigger: AATTACTGGCATGCAACAGCTATACTTTTGGATAGAAGACAAGCAGATTGGAACCTTATCATTAAGCACAGTCCGATCGGATATCCGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS CCA 90 bp AATTGTAAGAATTTGAGACGTTTTTCTGGTTTCCTATGTTTTAAATaGGCAGGTTTCCAGCAATTCAGCAACATTAGGCCAGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: NCKNLRRFSGFLCFK*AGFQQFSNIRPGQQ
Trigger: CTGTTGGCCTGGCCTAATGTTGCTGAATTGCTGGAAACCTGCCCATTTAAAACATAGGAAACCAGAAAAACGTCTCAAATTCTTACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS GCA 90 bp TTATTTACATCTCTTATTGCCCAAACCGGATATCCGATCGGACTGTaGTTAATGATAAGGTTCCAATCTGCTTGTCTTCTATCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: LFTSLIAQTGYPIGL*LMIRFQSACLLSKS
Trigger: ACTTTTGGATAGAAGACAAGCAGATTGGAACCTTATCATTAAGCACAGTCCGATCGGATATCCGGTTTGGGCAATAAGAGATGTAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS GCA 72 bp GATGAGCTCCTCGCGTTGGAACCAGTCCCACTCGTGTaGAGCCATGAAGCGCGGGCGGGAGAGCCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: DELLALEPVPLV*SHEARAGEPGP
Trigger: TGGCCCGGGCTCTCCCGCCCGCGCTTCATGGCTGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS GCA 72 bp TGGGGAGGCTCTCTCCTGGCACCGAGGAACTGGAGCTaGTCTGAGAGCCATCGGCCTCCTCCTCCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: WGGSLLAPRNWS*SESHRPPPPWS
Trigger: ACTCCAGGGAGGAGGAGGCCGATGGCTCTCAGAGCAGCTCCAGTTCCTCGGTGCCAGGAGAGAGCCTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 90 bp GTTCTGCACTCGGATGTCGCTAATCTGCCCGATGAGCTCCTCGCGTaGGAACCAGTCCCACTCGTGTGCAGCCATGAAGCGCGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: VLHSDVANLPDELLA*EPVPLVCSHEARAG
Trigger: TCCCGCCCGCGCTTCATGGCTGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCGAGTGCAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS CCA 72 bp GAGGAAACGCAGTTACCAAGCAGGTTCCCAGGAAAGTaGACCCCACCCAGTGCTACCCGTCTCTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: EETQLPSRFPGK*TPPSATRLSPA
Trigger: GGCCGGGGAGAGACGGGTAGCACTGGGTGGGGTCCACTTTCCTGGGAACCTGCTTGGTAACTGCGTTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS CCA 72 bp CCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTTaGCTGGGCTCCAGAATCAAAGACTCCCCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: PGHAHGEVEACS*LGSRIKDSPWR
Trigger: CCTCCACGGGGAGTCTTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS CAA 72 bp GCCAGGCCACGCTCATGGGGAAGTGGAGGCCTGTTCTaGGCTGGGCTCCAGAATCAAAGACTCCCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: ARPRSWGSGGLF*AGLQNQRLPVE
Trigger: CTCCACGGGGAGTCTTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS CAA 90 bp TCATGGCCCTTGCCCAAGGTACTCCTGGGAACTCAATACAGGCCATaGCCCGGGGCAACCTCCTGCTTTCGGCACCCAAGGCCCTTGGCT +
Preference number: 6 (lower is better)
Translates to: SWPLPKVLLGTQYRP*PGATSCFRHPRPLA
Trigger: AGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS TCA 72 bp GAGGAGGTGGCAGCCCCATTCTGCAGATGGACACACTaGGGCTTTCGGGGTGGAGTGACTTGCCCAAGGCCA +
Preference number: 6 (lower is better)
Translates to: EEVAAPFCRWTH*GFRGGVTCPRP
Trigger: TGGCCTTGGGCAAGTCACTCCACCCCGAAAGCCTCAGTGTGTCCATCTGCAGAATGGGGCTGCCACCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS GCA 72 bp CAGTGGGTGTGGGTGGGAAGGATGAGTCTGAGTCTGTaGCCCCTGAGCCAGGGGACAAGCTGGAAGATGGAG +
Preference number: 6 (lower is better)
Translates to: QWVWVGRMSLSL*PLSQGTSWKME
Trigger: CTCCATCTTCCAGCTTGTCCCCTGGCTCAGGGGGCACAGACTCAGACTCATCCTTCCCACCCACACCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000555336.6
CDS GCA 72 bp TGTTGCACCTCTGTCTCTGAACGTGATCCTTCTGGGTaGGCGCGGGGTCCAGGTGAGGCGTTTTGGGTGCGT +
Preference number: 6 (lower is better)
Translates to: CCTSVSERDPSG*ARGPGEAFWVR
Trigger: ACGCACCCAAAACGCCTCACCTGGACCCCGCGCGCACCCAGAAGGATCACGTTCAGAGACAGAGGTGCAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS GCA 72 bp TGCCCAAGGTACTCCTGGGAACTCAATACAGGCCATTaGCCGGGGCAACCTCCTGCTTTCGGCACCCAAGGC +
Preference number: 6 (lower is better)
Translates to: CPRYSWELNTGH*PGQPPAFGTQG
Trigger: GCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 72 bp CGGATGTCGCTAATCTGCCCGATGAGCTCCTCGCGTTaGAACCAGTCCCACTCGTGTGCAGCCATGAAGCGC +
Preference number: 6 (lower is better)
Translates to: RMSLICPMSSSR*NQSHSCAAMKR
Trigger: GCGCTTCATGGCTGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS CCA 72 bp TGGAGCTGCTCTGAGAGCCATCGGCCTCCTCCTCCCTaGAGTCCAGGTCTGGCATATAGCCCTCTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: WSCSESHRPPPP*SPGLAYSPLAL
Trigger: AAGAGCCAGAGGGCTATATGCCAGACCTGGACTCCAGGGAGGAGGAGGCCGATGGCTCTCAGAGCAGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 72 bp GGGTGGAGTGACTTGCCCAAGGCCATGCAATTAACTTaGCGACAGAGAGGGCGCCTAGGCCAGGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GWSDLPKAMQLT*RQRGRLGQVSW
Trigger: CCAGGAGACCTGGCCTAGGCGCCCTCTCTGTCGCCAAGTTAATTGCATGGCCTTGGGCAAGTCACTCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS CAA 90 bp TTTTCCAGGGCCTGTTTCATGTCCACCAGGCTGGGGTCAATGGCCTaGATCACCGCCAGGAAAGCCAGCCCACTCCTCCAACTGCCCGCA +
Preference number: 6 (lower is better)
Translates to: FSRACFMSTRLGSMA*ITARKASPLLQLPA
Trigger: TGCGGGCAGTTGGAGGAGTGGGCTGGCTTTCCTGGCGGTGATCAAGGCCATTGACCCCAGCCTGGTGGACATGAAACAGGCCCTGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS GCA 72 bp GGAACTCAATACAGGCCATTGCCCGGGGCAACCTCCTaGTTTCGGCACCCAAGGCCCTTGGCTTTGAATCGG +
Preference number: 6 (lower is better)
Translates to: GTQYRPLPGATS*FRHPRPLALNR
Trigger: CCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS GCA 72 bp TGCGATGTCTCTGTCCCCTACGGGTCAGCAATCACGTaGCACTTCATGGCCCTTGCCCAAGGTACTCCTGGG +
Preference number: 6 (lower is better)
Translates to: CDVSVPYGSAIT*HFMALAQGTPG
Trigger: CCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGGGGACAGAGACATCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 72 bp TCATTCTCTTTGGTCTCCCTTTGCTGGTGGTCCTCATaGGGGGCCAGTGGAGCGGGTTCTGAGGCTGGTGTG +
Preference number: 6 (lower is better)
Translates to: SFSLVSLCWWSS*GASGAGSEAGV
Trigger: CACACCAGCCTCAGAACCCGCTCCACTGGCCCCCCATGAGGACCACCAGCAAAGGGAGACCAAAGAGAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 72 bp TGGACAAGCTGTGTCAGGGAGTCACTCTGCGGGCTGTaGCTCCCCAGTGACATGGCTTCTCCTGAGCTGTTG +
Preference number: 6 (lower is better)
Translates to: WTSCVRESLCGL*LPSDMASPELL
Trigger: CAACAGCTCAGGAGAAGCCATGTCACTGGGGAGCCACAGCCCGCAGAGTGACTCCCTGACACAGCTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298912.9
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS CCA 72 bp CCAGGTGTGAAGTGCCAGGCCACGCTCATGGGGAAGTaGAGGCCTGTTCTTGGCTGGGCTCCAGAATCAAAG +
Preference number: 6 (lower is better)
Translates to: PGVKCQATLMGK*RPVLGWAPESK
Trigger: CTTTGATTCTGGAGCCCAGCCAAGAACAGGCCTCCACTTCCCCATGAGCGTGGCCTGGCACTTCACACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS CCA 72 bp CACGTGCCACTTCATGGCCCTTGCCCAAGGTACTCCTaGGAACTCAATACAGGCCATTGCCCGGGGCAACCT +
Preference number: 6 (lower is better)
Translates to: HVPLHGPCPRYS*ELNTGHCPGQP
Trigger: AGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CAA 72 bp TCGGATGTCGCTAATCTGCCCGATGAGCTCCTCGCGTaGGAACCAGTCCCACTCGTGTGCAGCCATGAAGCG +
Preference number: 6 (lower is better)
Translates to: SDVANLPDELLA*EPVPLVCSHEA
Trigger: CGCTTCATGGCTGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS CAA 72 bp TTGCCCAAGGTACTCCTGGGAACTCAATACAGGCCATaGCCCGGGGCAACCTCCTGCTTTCGGCACCCAAGG +
Preference number: 6 (lower is better)
Translates to: LPKVLLGTQYRP*PGATSCFRHPR
Trigger: CCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CAA 90 bp TCTCTGTCCCCTACGGGTCAGCAATCACGTGCCACTTCATGGCCCTaGCCCAAGGTACTCCTGGGAACTCAATACAGGCCATTGCCCGGG +
Preference number: 6 (lower is better)
Translates to: SLSPTGQQSRATSWP*PKVLLGTQYRPLPG
Trigger: CCCGGGCAATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGGGGACAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS GCA 72 bp TCCTGCACCGCCACGCCATACTTTCTCGTTTTCCTCTaGACCCACGCCAACAGGGCCTTGATAGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SCTATPYFLVFL*THANRALIAFL
Trigger: GAGGAAGGCTATCAAGGCCCTGTTGGCGTGGGTGCAGAGGAAAACGAGAAAGTATGGCGTGGCGGTGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS GCA 72 bp CTGGGGCCTCTGCTTGGAGCTGCATGTAGAGAAGCCTaGAGTGTAAGCCTCTTAGGGTGGTTTCGTGCGGTG +
Preference number: 6 (lower is better)
Translates to: LGPLLGAACREA*SVSLLGWFRAV
Trigger: CACCGCACGAAACCACCCTAAGAGGCTTACACTGCAGGCTTCTCTACATGCAGCTCCAAGCAGAGGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS CAA 72 bp CCCGGGGCAACCTCCTGCTTTCGGCACCCAAGGCCCTaGGCTTTGAATCGGGAGGTAACACGTTTGGTTTGT +
Preference number: 6 (lower is better)
Translates to: PGATSCFRHPRP*ALNREVTRLVC
Trigger: ACAAACCAAACGTGTTACCTCCCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS GCA 72 bp TCAACTTGCAGGTTCTGCACTCGGATGTCGCTAATCTaGCCGATGAGCTCCTCGCGTTGGAACCAGTCCCAC +
Preference number: 6 (lower is better)
Translates to: STCRFCTRMSLI*PMSSSRWNQSH
Trigger: GTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCGAGTGCAGAACCTGCAAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000553733.1
CDS GCA 72 bp GGCCTTGATAGCCTTCCTCTGGTCTTTCACCGATATTaGCACGCTCCTCTCTGCAGTGGGTGTGGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: GLDSLPLVFHRY*HAPLCSGCGWE
Trigger: TTCCCACCCACACCCACTGCAGAGAGGAGCGTGGCAATATCGGTGAAAGACCAGAGGAAGGCTATCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000555336.6
CDS GCA 72 bp ACCATGATGTCTTCTGGCTCCAGGAGCCTGGGGATGTaGAGGGCATCCTGTGCGATGCTGAAAGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: TMMSSGSRSLGM*RASCAMLKAFS
Trigger: AGAGAAGGCTTTCAGCATCGCACAGGATGCCCTGCACATCCCCAGGCTCCTGGAGCCAGAAGACATCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 72 bp TGCACCCACGCCAACAGGGCCTTGATAGCCTTCCTCTaGTCTTTCACCGATATTGCCACGCTCCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: CTHANRALIAFL*SFTDIATLLSA
Trigger: TGCAGAGAGGAGCGTGGCAATATCGGTGAAAGACCAGAGGAAGGCTATCAAGGCCCTGTTGGCGTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000555336.6
CDS CCA 72 bp CTGTCCCCTACGGGTCAGCAATCACGTGCCACTTCATaGCCCTTGCCCAAGGTACTCCTGGGAACTCAATAC +
Preference number: 6 (lower is better)
Translates to: LSPTGQQSRATS*PLPKVLLGTQY
Trigger: GTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CAA 72 bp CCTACGGGTCAGCAATCACGTGCCACTTCATGGCCCTaGCCCAAGGTACTCCTGGGAACTCAATACAGGCCA +
Preference number: 6 (lower is better)
Translates to: PTGQQSRATSWP*PKVLLGTQYRP
Trigger: TGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS GCA 72 bp AGCACGTGCCACTGTCCATCGGACCTTGACTCATGTTaGACCTCTGTCTCTGAACGTGATCCTTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: STCHCPSDLDSC*TSVSERDPSGC
Trigger: GCACCCAGAAGGATCACGTTCAGAGACAGAGGTGCAACATGAGTCAAGGTCCGATGGACAGTGGCACGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556454.1
CDS GCA 72 bp CTGCTCCGGGTTCTAACACATCTGCTACTGAGCACGTaGCACTGTCCATCGGACCTTGACTCATGTTGCACC +
Preference number: 6 (lower is better)
Translates to: LLRVLTHLLLST*HCPSDLDSCCT
Trigger: GGTGCAACATGAGTCAAGGTCCGATGGACAGTGGCACGTGCTCAGTAGCAGATGTGTTAGAACCCGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556454.1
CDS GCA 72 bp CTACGGGTCAGCAATCACGTGCCACTTCATGGCCCTTaGCCAAGGTACTCCTGGGAACTCAATACAGGCCAT +
Preference number: 6 (lower is better)
Translates to: LRVSNHVPLHGP*PRYSWELNTGH
Trigger: ATGGCCTGTATTGAGTTCCCAGGAGTACCTTGGGCAAGGGCCATGAAGTGGCACGTGATTGCTGACCCGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CCA 72 bp TGGTGCATGAACTCGGTGGAGCTGTCTGACAGCGCATaGCTGGAAACACCATCCAGGCGGAATTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: WCMNSVELSDSA*LETPSRRNSFM
Trigger: CATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAGACAGCTCCACCGAGTTCATGCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 72 bp ACACCATCCAGGCGGAATTCCTTCATGCTCTCGGGCTaGTCACAGACAAAGACTTTGGAGGGTGGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: TPSRRNSFMLSG*SQTKTLEGGGW
Trigger: CCACCCACCACCCTCCAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAAGGAATTCCGCCTGGATGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 90 bp ACGCCATACTTTCTCGTTTTCCTCTGCACCCACGCCAACAGGGCCTaGATAGCCTTCCTCTGGTCTTTCACCGATATTGCCACGCTCCTC +
Preference number: 6 (lower is better)
Translates to: TPYFLVFLCTHANRA*IAFLWSFTDIATLL
Trigger: GAGGAGCGTGGCAATATCGGTGAAAGACCAGAGGAAGGCTATCAAGGCCCTGTTGGCGTGGGTGCAGAGGAAAACGAGAAAGTATGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS CAA 90 bp TGGCTGGAAACACCATCCAGGCGGAATTCCTTCATGCTCTCGGGCTaGTCACAGACAAAGACTTTGGAGGGTGGTGGGTGGCTGGTTTCA +
Preference number: 6 (lower is better)
Translates to: WLETPSRRNSFMLSG*SQTKTLEGGGWLVS
Trigger: TGAAACCAGCCACCCACCACCCTCCAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 90 bp AGGCCATTGCCCGGGGCAACCTCCTGCTTTCGGCACCCAAGGCCCTaGGCTTTGAATCGGGAGGTAACACGTTTGGTTTGTTTTAGATCA +
Preference number: 6 (lower is better)
Translates to: RPLPGATSCFRHPRP*ALNREVTRLVCFRS
Trigger: TGATCTAAAACAAACCAAACGTGTTACCTCCCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS TCA 72 bp GTCAATAATCTGGTGCATGAACTCGGTGGAGCTGTCTaGCAGCGCATGGCTGGAAACACCATCCAGGCGGAA +
Preference number: 6 (lower is better)
Translates to: VNNLVHELGGAV*QRMAGNTIQAE
Trigger: TTCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAGACAGCTCCACCGAGTTCATGCACCAGATTATTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS TCA 72 bp CTCTGGCTTTTTATCCACTGGTGTCTCTTCTGGGGCTaGAGGACAGCCTTCAGCTTCTTCTCCGGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: LWLFIHWCLFWG*RTAFSFFSGVL
Trigger: CAGGACTCCGGAGAAGAAGCTGAAGGCTGTCCTTCAGCCCCAGAAGAGACACCAGTGGATAAAAAGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS TCA 72 bp TCTGCAGATGGACACACTGAGGCTTTCGGGGTGGAGTaGCTTGCCCAAGGCCATGCAATTAACTTGGCGACA +
Preference number: 6 (lower is better)
Translates to: SADGHTEAFGVE*LAQGHAINLAT
Trigger: TGTCGCCAAGTTAATTGCATGGCCTTGGGCAAGTCACTCCACCCCGAAAGCCTCAGTGTGTCCATCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS CCA 72 bp CAGACACACGTATCAGAGCCTGCTAACATCCAGTTGTaGGAAGAGCAGCAAGCAGTACACCAGGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: QTHVSEPANIQL*EEQQAVHQEPQ
Trigger: CTGTGGCTCCTGGTGTACTGCTTGCTGCTCTTCCCACAACTGGATGTTAGCAGGCTCTGATACGTGTGTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298912.9
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS GCA 72 bp CATGGCTGGAAACACCATCCAGGCGGAATTCCTTCATaGTCTCGGGCTTGTCACAGACAAAGACTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: HGWKHHPGGIPS*SRACHRQRLWR
Trigger: CCTCCAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS GCA 72 bp TCCTCAGCAACCTCAACTGCCAAGACATGTCCATCCTaGCTCAATGATTCCTTTGCCACTCTTGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SSATSTAKTCPS*LNDSFATLGLP
Trigger: AGGGAGCCCAAGAGTGGCAAAGGAATCATTGAGGCAGGATGGACATGTCTTGGCAGTTGAGGTTGCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 72 bp TTTCTCGTTTTCCTCTGCACCCACGCCAACAGGGCCTaGATAGCCTTCCTCTGGTCTTTCACCGATATTGCC +
Preference number: 6 (lower is better)
Translates to: FLVFLCTHANRA*IAFLWSFTDIA
Trigger: GGCAATATCGGTGAAAGACCAGAGGAAGGCTATCAAGGCCCTGTTGGCGTGGGTGCAGAGGAAAACGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298912.9
CDS CAA 72 bp ATCCAGACACACGTATCAGAGCCTGCTAACATCCAGTaGTGGGAAGAGCAGCAAGCAGTACACCAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: IQTHVSEPANIQ*WEEQQAVHQEP
Trigger: TGGCTCCTGGTGTACTGCTTGCTGCTCTTCCCACAACTGGATGTTAGCAGGCTCTGATACGTGTGTCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298912.9
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS CAA 90 bp TTGCCCGGGGCAACCTCCTGCTTTCGGCACCCAAGGCCCTTGGCTTaGAATCGGGAGGTAACACGTTTGGTTTGTTTTAGATCAGAGTTA +
Preference number: 6 (lower is better)
Translates to: LPGATSCFRHPRPLA*NREVTRLVCFRSEL
Trigger: TAACTCTGATCTAAAACAAACCAAACGTGTTACCTCCCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGCCCCGGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CAA 90 bp GCCACAGTGCTCTCAGAGAGTGACACGGAGTTAGATACTGATCGCTaGCTGCTGTTTGTTAGTAACGCAGGGGACCCCATAGGTCATCTA +
Preference number: 6 (lower is better)
Translates to: ATVLSESDTELDTDR*LLFVSNAGDPIGHL
Trigger: TAGATGACCTATGGGGTCCCCTGCGTTACTAACAAACAGCAGCAAGCGATCAGTATCTAACTCCGTGTCACTCTCTGAGAGCACTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS TCA 72 bp GGAGCCTGGGGATGTGCAGGGCATCCTGTGCGATGCTaGAAGCCTTCTCTAGATTTTCTCGTGTGGAATTTT +
Preference number: 6 (lower is better)
Translates to: GAWGCAGHPVRC*KPSLDFLVWNF
Trigger: AAAATTCCACACGAGAAAATCTAGAGAAGGCTTTCAGCATCGCACAGGATGCCCTGCACATCCCCAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS TCA 72 bp GAAGGAATCGGCCATCACAGTATTTTCTCCTGGGGGTaGAAGAGAGTGACTTTCTTCATCGTGGCGGGCTGT +
Preference number: 6 (lower is better)
Translates to: EGIGHHSIFSWG*KRVTFFIVAGC
Trigger: ACAGCCCGCCACGATGAAGAAAGTCACTCTCTTTCACCCCCAGGAGAAAATACTGTGATGGCCGATTCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS TCA 72 bp TTTTGCACGTACTCCGTTCATCTCCATAACATCAGGTaGGAGGAGGTGGCAGCCCCATTCTGCAGATGGACA +
Preference number: 6 (lower is better)
Translates to: FCTYSVHLHNIR*EEVAAPFCRWT
Trigger: TGTCCATCTGCAGAATGGGGCTGCCACCTCCTCTCACCTGATGTTATGGAGATGAACGGAGTACGTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS GCA 72 bp AGCCACAGGAAGAGAATAAAATACATCATATCCGGCTaGTGGACAAGCTGTGTCAGGGAGTCACTCTGCGGG +
Preference number: 6 (lower is better)
Translates to: SHRKRIKYIISG*WTSCVRESLCG
Trigger: CCCGCAGAGTGACTCCCTGACACAGCTTGTCCAGCAGCCGGATATGATGTATTTTATTCTCTTCCTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298912.9
ENST00000556441.1
ENST00000556454.1
ENST00000557215.5
ENST00000557696.5
CDS CAA 72 bp TCCTTCATGCTCTCGGGCTTGTCACAGACAAAGACTTaGGAGGGTGGTGGGTGGCTGGTTTCATGGTTAACA +
Preference number: 6 (lower is better)
Translates to: SFMLSGLSQTKT*EGGGWLVSWLT
Trigger: TGTTAACCATGAAACCAGCCACCCACCACCCTCCAAAGTCTTTGTCTGTGACAAGCCCGAGAGCATGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 72 bp GCAACCTCCTGCTTTCGGCACCCAAGGCCCTTGGCTTaGAATCGGGAGGTAACACGTTTGGTTTGTTTTAGA +
Preference number: 6 (lower is better)
Translates to: ATSCFRHPRPLA*NREVTRLVCFR
Trigger: TCTAAAACAAACCAAACGTGTTACCTCCCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAAGCAGGAGGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS CAA 90 bp TTTCGGCACCCAAGGCCCTTGGCTTTGAATCGGGAGGTAACACGTTaGGTTTGTTTTAGATCAGAGTTAAACTCACAGGCCAGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: FRHPRPLALNREVTR*VCFRSELNSQARPA
Trigger: AGCTGGCCTGGCCTGTGAGTTTAACTCTGATCTAAAACAAACCAAACGTGTTACCTCCCGATTCAAAGCCAAGGGCCTTGGGTGCCGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS TCA 72 bp AGCCTCAGCATCCTCGTCAGGTTTTGTCTCATGAGGTaGAGGAACTTTGTTGAAAGCCTGGCTGGTAGAAGC +
Preference number: 6 (lower is better)
Translates to: SLSILVRFCLMR*RNFVESLAGRS
Trigger: GCTTCTACCAGCCAGGCTTTCAACAAAGTTCCTTCACCTCATGAGACAAAACCTGACGAGGATGCTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS TCA 72 bp GCCATCACAGTATTTTCTCCTGGGGGTGAAAGAGAGTaGCTTTCTTCATCGTGGCGGGCTGTACTCTCTAAA +
Preference number: 6 (lower is better)
Translates to: AITVFSPGGERE*LSSSWRAVLSK
Trigger: TTTAGAGAGTACAGCCCGCCACGATGAAGAAAGTCACTCTCTTTCACCCCCAGGAGAAAATACTGTGATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 72 bp GAGGGATGGGGTTCTAATGACCACACTCTTGGGTGTTaGGTAATATTCAGACAGAGGCTTCCGATTCCAGTA +
Preference number: 6 (lower is better)
Translates to: EGWGSNDHTLGC*VIFRQRLPIPV
Trigger: TACTGGAATCGGAAGCCTCTGTCTGAATATTACCCAACACCCAAGAGTGTGGTCATTAGAACCCCATCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556416.1
CDS TCA 72 bp TCAAAAGCCTCAGCATCCTCGTCAGGTTTTGTCTCATaGGGTGAAGGAACTTTGTTGAAAGCCTGGCTGGTA +
Preference number: 6 (lower is better)
Translates to: SKASASSSGFVS*GEGTLLKAWLV
Trigger: TACCAGCCAGGCTTTCAACAAAGTTCCTTCACCTCATGAGACAAAACCTGACGAGGATGCTGAGGCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 72 bp ATGTTGTTCAACCGAAAAATACGATGCGACGAGGATTaGTATTCGTGCAGCAGATTCCGCCCAGACAGGACT +
Preference number: 6 (lower is better)
Translates to: MLFNRKIRCDED*YSCSRFRPDRT
Trigger: AGTCCTGTCTGGGCGGAATCTGCTGCACGAATACAAATCCTCGTCGCATCGTATTTTTCGGTTGAACAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298912.9
ENST00000555336.6
ENST00000555615.1
CDS CAA 72 bp CCAAGGCCCTTGGCTTTGAATCGGGAGGTAACACGTTaGGTTTGTTTTAGATCAGAGTTAAACTCACAGGCC +
Preference number: 6 (lower is better)
Translates to: PRPLALNREVTR*VCFRSELNSQA
Trigger: GGCCTGTGAGTTTAACTCTGATCTAAAACAAACCAAACGTGTTACCTCCCGATTCAAAGCCAAGGGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555615.1
CDS GCA 72 bp AGTGCTTTCGCTATGTTGTTCAACCGAAAAATACGATaGGACGAGGATTTGTATTCGTGCAGCAGATTCCGC +
Preference number: 6 (lower is better)
Translates to: SAFAMLFNRKIR*DEDLYSCSRFR
Trigger: GCGGAATCTGCTGCACGAATACAAATCCTCGTCGCATCGTATTTTTCGGTTGAACAACATAGCGAAAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298912.9
ENST00000555336.6
ENST00000555615.1
CDS CCA 72 bp AAAAATGTCACCAGCGACCTTGTCAGAGGAGGATTCTaGAATCTTCGAGGATTCCTGTTTCTGTTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: KNVTSDLVRGGF*NLRGFLFLFLF
Trigger: GAAAAGGAACAGAAACAGGAATCCTCGAAGATTCCAGAATCCTCCTCTGACAAGGTCGCTGGTGACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CCA 72 bp TCTAAAGCTTCTACAGTCATCAGGTTAACCTTGATCTaGAAGGAATCGGCCATCACAGTATTTTCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: SKASTVIRLTLI*KESAITVFSPG
Trigger: CCCAGGAGAAAATACTGTGATGGCCGATTCCTTCCAGATCAAGGTTAACCTGATGACTGTAGAAGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 72 bp CCCTCCTCTAAAGCTTCTACAGTCATCAGGTTAACCTaGATCTGGAAGGAATCGGCCATCACAGTATTTTCT +
Preference number: 6 (lower is better)
Translates to: PSSKASTVIRLT*IWKESAITVFS
Trigger: AGAAAATACTGTGATGGCCGATTCCTTCCAGATCAAGGTTAACCTGATGACTGTAGAAGCTTTAGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 90 bp GACGTTATCTTAGACACATCCTTAGTCTTCAGGGAGCTTGTGATTTaGACACACAATAACAGAAGGATTTCTAGAGGCTGGGCAGTCCAA +
Preference number: 6 (lower is better)
Translates to: DVILDTSLVFRELVI*THNNRRISRGWAVQ
Trigger: TTGGACTGCCCAGCCTCTAGAAATCCTTCTGTTATTGTGTGTCAAAATCACAAGCTCCCTGAAGACTAAGGATGTGTCTAAGATAACGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555336.6
CDS GCA 72 bp TCTCTTATTGCCCAAACCGGATATCCGATCGGACTGTaGTTAATGATAAGGTTCCAATCTGCTTGTCTTCTA +
Preference number: 6 (lower is better)
Translates to: SLIAQTGYPIGL*LMIRFQSACLL
Trigger: TAGAAGACAAGCAGATTGGAACCTTATCATTAAGCACAGTCCGATCGGATATCCGGTTTGGGCAATAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS GCA 72 bp TCCGATCGGACTGTGCTTAATGATAAGGTTCCAATCTaGTTGTCTTCTATCCAAAAGTATAGCTGTTGCATG +
Preference number: 6 (lower is better)
Translates to: SDRTVLNDKVPI*LSSIQKYSCCM
Trigger: CATGCAACAGCTATACTTTTGGATAGAAGACAAGCAGATTGGAACCTTATCATTAAGCACAGTCCGATCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS CCA 72 bp GCACATTTTCCCTCTCAAAATATTGCCTGCTATGAGTaGAGACGTTATCTTAGACACATCCTTAGTCTTCAG +
Preference number: 6 (lower is better)
Translates to: AHFPSQNIACYE*RRYLRHILSLQ
Trigger: CTGAAGACTAAGGATGTGTCTAAGATAACGTCTCCACTCATAGCAGGCAATATTTTGAGAGGGAAAATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555336.6
CDS CAA 72 bp ACGAAGACTTTGCTCTCCTGTTCAGAAGGAGTTTCTTaGATGCGAACAAAAGTGGATTCGATAGGAACTTCT +
Preference number: 6 (lower is better)
Translates to: TKTLLSCSEGVS*MRTKVDSIGTS
Trigger: AGAAGTTCCTATCGAATCCACTTTTGTTCGCATCAAAGAAACTCCTTCTGAACAGGAGAGCAAAGTCTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 72 bp GATCGGACTGTGCTTAATGATAAGGTTCCAATCTGCTaGTCTTCTATCCAAAAGTATAGCTGTTGCATGCCA +
Preference number: 6 (lower is better)
Translates to: DRTVLNDKVPIC*SSIQKYSCCMP
Trigger: TGGCATGCAACAGCTATACTTTTGGATAGAAGACAAGCAGATTGGAACCTTATCATTAAGCACAGTCCGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS CAA 90 bp AAGAAGAGGATTATGTTCCATATCAGCCCAAGAACCAAAGAAGGGTaGCCATCTGCTATTTCTGCTGCATCAATGCTAACCAGTTTTACA +
Preference number: 6 (lower is better)
Translates to: KKRIMFHISPRTKEG*PSAISAASMLTSFT
Trigger: TGTAAAACTGGTTAGCATTGATGCAGCAGAAATAGCAGATGGCAACCCTTCTTTGGTTCTTGGGCTGATATGGAACATAATCCTCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298912.9
ENST00000555336.6
ENST00000555615.1
CDS CAA 90 bp CGGATATCCGATCGGACTGTGCTTAATGATAAGGTTCCAATCTGCTaGTCTTCTATCCAAAAGTATAGCTGTTGCATGCCAGTAATTTCA +
Preference number: 6 (lower is better)
Translates to: RISDRTVLNDKVPIC*SSIQKYSCCMPVIS
Trigger: TGAAATTACTGGCATGCAACAGCTATACTTTTGGATAGAAGACAAGCAGATTGGAACCTTATCATTAAGCACAGTCCGATCGGATATCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000556454.1
ENST00000557696.5
CDS CAA 90 bp AGCAGATTCCGCCCAGACAGGACTTCTAACAAAGCCATTAGGATTTaGCCATCTTGTATATCGACGAATAAATCTTTAACTTCTAGAGGT +
Preference number: 6 (lower is better)
Translates to: SRFRPDRTSNKAIRI*PSCISTNKSLTSRG
Trigger: ACCTCTAGAAGTTAAAGATTTATTCGTCGATATACAAGATGGCAAAATCCTAATGGCTTTGTTAGAAGTCCTGTCTGGGCGGAATCTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298912.9
ENST00000555336.6
ENST00000555615.1
CDS CAA 90 bp TCAGTCAGAACGAAGACTTTGCTCTCCTGTTCAGAAGGAGTTTCTTaGATGCGAACAAAAGTGGATTCGATAGGAACTTCTTTATCTGAA +
Preference number: 6 (lower is better)
Translates to: SVRTKTLLSCSEGVS*MRTKVDSIGTSLSE
Trigger: TTCAGATAAAGAAGTTCCTATCGAATCCACTTTTGTTCGCATCAAAGAAACTCCTTCTGAACAGGAGAGCAAAGTCTTCGTTCTGACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS CAA 90 bp CTCAGATTCCGCCCAGACAGGACTTCTAACAAAGCCATTAGGATTTaGCCATCTTGTATATCGACGAATAAATCTTTAACTTCTAGAGGT +
Preference number: 6 (lower is better)
Translates to: LRFRPDRTSNKAIRI*PSCISTNKSLTSRG
Trigger: ACCTCTAGAAGTTAAAGATTTATTCGTCGATATACAAGATGGCAAAATCCTAATGGCTTTGTTAGAAGTCCTGTCTGGGCGGAATCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553733.1
CDS TCA 72 bp GCGAACAAAAGTGGATTCGATAGGAACTTCTTTATCTaGATCGAAAATATCTTCGGCTTCCAACTCCGGAAA +
Preference number: 6 (lower is better)
Translates to: ANKSGFDRNFFI*IENIFGFQLRK
Trigger: TTTCCGGAGTTGGAAGCCGAAGATATTTTCGATTCAGATAAAGAAGTTCCTATCGAATCCACTTTTGTTCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298912.9
ENST00000556454.1
CDS GCA 72 bp AAGAACCAAAGAAGGGTTGCCATCTGCTATTTCTGCTaGATCAATGCTAACCAGTTTTACATTGCTATCTTC +
Preference number: 6 (lower is better)
Translates to: KNQRRVAICYFC*INANQFYIAIF
Trigger: GAAGATAGCAATGTAAAACTGGTTAGCATTGATGCAGCAGAAATAGCAGATGGCAACCCTTCTTTGGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298912.9
ENST00000555336.6
ENST00000555615.1
CDS CAA 72 bp CGCCCAGACAGGACTTCTAACAAAGCCATTAGGATTTaGCCATCTTGTATATCGACGAATAAATCTTTAACT +
Preference number: 6 (lower is better)
Translates to: RPDRTSNKAIRI*PSCISTNKSLT
Trigger: AGTTAAAGATTTATTCGTCGATATACAAGATGGCAAAATCCTAATGGCTTTGTTAGAAGTCCTGTCTGGGCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298912.9
ENST00000553733.1
ENST00000555336.6
ENST00000555615.1