Pregenerated sensors for CLMAT3 (Homo sapiens)
Ensembl gene IDs: ENSG00000249035Ensembl transcript IDs: ENST00000510576.6, ENST00000518905.1, ENST00000663441.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCGGTCCTTCAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTaGCTGCCTGCCACTGAGGTATGTGTGACCCCCGCCCAGCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PRSFRLPGERALPAA*LPATEVCVTPAQPF Trigger: GAAAGGCTGGGCGGGGGTCACACATACCTCAGTGGCAGGCAGGCAGGCGGCAGGCAGAGCGCGCTCTCCGGGCAGTCTGAAGGACCGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 90 bp | CCCCGTTCACGCCGTCAGCTCGTGTGCAAGGGAGGGAAGCTCTGCTaGGGATGCGCCTCTCCTCCCGGCTCCATCACGGCTCCCCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: PRSRRQLVCKGGKLC*GCASPPGSITAPLK Trigger: CTTAAGGGGAGCCGTGATGGAGCCGGGAGGAGAGGCGCATCCTCAGCAGAGCTTCCCTCCCTTGCACACGAGCTGACGGCGTGAACGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 90 bp | CCCTGGCACTCTGTGAGTCGGTTTAGGCAGCAGCCCCGGAACAGATaGGGCAGGCAGGGTTGGGACGTTTGGTCAGGACAGCCCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: PWHSVSRFRQQPRNR*GRQGWDVWSGQPTA Trigger: TGCGGTGGGCTGTCCTGACCAAACGTCCCAACCCTGCCTGCCTCATCTGTTCCGGGGCTGCTGCCTAAACCGACTCACAGAGTGCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 90 bp | GATCTCTTTCTTCGCCGCCACTGGCTCCGTGAACTGGCTGTCAAGTaGACTTCCTTAGGGAAAGGGACTCCAAGGACTCCAAGGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: DLFLRRHWLRELAVK*TSLGKGTPRTPREG Trigger: CCCTTCCCTTGGAGTCCTTGGAGTCCCTTTCCCTAAGGAAGTCCACTTGACAGCCAGTTCACGGAGCCAGTGGCGGCGAAGAAAGAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 90 bp | GACTGGGCTTCGCATGGGTGTAAAATGGGTTGGCAGCTAAGGCCTTaGGAAGAAAGCCCAGGCAAAGAGGAGAGGCTTCCTGGGGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: DWASHGCKMGWQLRP*EESPGKEERLPGVH Trigger: ATGCACCCCAGGAAGCCTCTCCTCTTTGCCTGGGCTTTCTTCCCAAGGCCTTAGCTGCCAACCCATTTTACACCCATGCGAAGCCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS GCA 90 bp | GGCTCCATCACGGCTCCCCTTAAGAGCATGGCCCTCGGTCCTGTCTaGCTGTTGCTTTTCAGAAGGTGGACTCACTGTGTAACTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GSITAPLKSMALGPV*LLLFRRWTHCVTLS Trigger: AGACAAAGTTACACAGTGAGTCCACCTTCTGAAAAGCAACAGGCAGACAGGACCGAGGGCCATGCTCTTAAGGGGAGCCGTGATGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 90 bp | TGTAAAGCTCACTGGTTAGAAGATCAAGACACTTGGGCCTGGTTCTaGCCCTGGGGGCCATTGGGTAATTCCTTGCAGTCTCCAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CKAHWLEDQDTWAWF*PWGPLGNSLQSPGL Trigger: GAGGCCTGGAGACTGCAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTGAGCTTTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 90 bp | AGGGAGGACTCCTGTAAAGCTCACTGGTTAGAAGATCAAGACACTTaGGCCTGGTTCTGCCCCTGGGGGCCATTGGGTAATTCCTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: REDSCKAHWLEDQDT*AWFCPWGPLGNSLQ Trigger: CTGCAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTGAGCTTTACAGGAGTCCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 90 bp | GCTGGCTGTACTTTTCCATCCTCAGAGTCTTTCCAGAGAGAGAAGTaGCCTCAGCTTCAGGTCCTGCTGGCAGCCAAGGACGGGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: AGCTFPSSESFQREK*PQLQVLLAAKDGFS Trigger: TGAAAACCCGTCCTTGGCTGCCAGCAGGACCTGAAGCTGAGGTCACTTCTCTCTCTGGAAAGACTCTGAGGATGGAAAAGTACAGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 90 bp | TCATCTTGGGCCTTCTGTGAGTCTCCTTTTCTTCAGGTGACTGACTaGGCTTCGCATGGGTGTAAAATGGGTTGGCAGCTAAGGCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SSWAFCESPFLQVTD*ASHGCKMGWQLRPW Trigger: CCAAGGCCTTAGCTGCCAACCCATTTTACACCCATGCGAAGCCCAGTCAGTCACCTGAAGAAAAGGAGACTCACAGAAGGCCCAAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS CCA 90 bp | TTCTCAGCATTGCCTAATATTAGGGAGGACTCCTGTAAAGCTCACTaGTTAGAAGATCAAGACACTTGGGCCTGGTTCTGCCCCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: FSALPNIREDSCKAH*LEDQDTWAWFCPWG Trigger: CCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTGAGCTTTACAGGAGTCCTCCCTAATATTAGGCAATGCTGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 90 bp | ACTAGTAGCAGCTTGTCTTGTCTGTACAGTGGTAAGTCCTGGCCTTaGCTTTGTGGCAAATACAACCCCCTTGAATTGCTTGGCCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TSSSLSCLYSGKSWP*LCGKYNPLELLGPS Trigger: AGAAGGGCCAAGCAATTCAAGGGGGTTGTATTTGCCACAAAGGCAAGGCCAGGACTTACCACTGTACAGACAAGACAAGCTGCTACTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 90 bp | GATACCACTAGTAGCAGCTTGTCTTGTCTGTACAGTGGTAAGTCCTaGCCTTGCCTTTGTGGCAAATACAACCCCCTTGAATTGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: DTTSSSLSCLYSGKS*PCLCGKYNPLELLG Trigger: GCCAAGCAATTCAAGGGGGTTGTATTTGCCACAAAGGCAAGGCCAGGACTTACCACTGTACAGACAAGACAAGCTGCTACTAGTGGTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 90 bp | AGTTGGCTAGACTTTGAGAGGTCCAGTGTTGGCCAGGAGCAGGACTaGAAGACTGGAACCATTCAGCTGTCTTCAAATCTTAATGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: SWLDFERSSVGQEQD*KTGTIQLSSNLNEV Trigger: CACTTCATTAAGATTTGAAGACAGCTGAATGGTTCCAGTCTTTCAGTCCTGCTCCTGGCCAACACTGGACCTCTCAAAGTCTAGCCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS TCA 90 bp | ACCTGTTGCACTGAGCAGTTCATATATAACAGGAGTGACCCAAGTTaGAACGTAGAATCAGCCCTCTCATACCACTTTTTGCCAGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: TCCTEQFIYNRSDPS*NVESALSYHFLPGD Trigger: ATCACCTGGCAAAAAGTGGTATGAGAGGGCTGATTCTACGTTTCAACTTGGGTCACTCCTGTTATATATGAACTGCTCAGTGCAACAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 72 bp | TTCAGACTGCCCGGAGAGCGCGCTCTGCCTGCCGCCTaGCTGCCTGCCACTGAGGTATGTGTGACCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: FRLPGERALPAA*LPATEVCVTPA Trigger: GGCGGGGGTCACACATACCTCAGTGGCAGGCAGGCAGGCGGCAGGCAGAGCGCGCTCTCCGGGCAGTCTGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 72 bp | CGCCGTCAGCTCGTGTGCAAGGGAGGGAAGCTCTGCTaGGGATGCGCCTCTCCTCCCGGCTCCATCACGGCT | + |
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Preference number: 6 (lower is better) Translates to: RRQLVCKGGKLC*GCASPPGSITA Trigger: AGCCGTGATGGAGCCGGGAGGAGAGGCGCATCCTCAGCAGAGCTTCCCTCCCTTGCACACGAGCTGACGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 72 bp | TCTGTGAGTCGGTTTAGGCAGCAGCCCCGGAACAGATaGGGCAGGCAGGGTTGGGACGTTTGGTCAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: SVSRFRQQPRNR*GRQGWDVWSGQ Trigger: CTGTCCTGACCAAACGTCCCAACCCTGCCTGCCTCATCTGTTCCGGGGCTGCTGCCTAAACCGACTCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 72 bp | GCCTGGTTCTGCCCCTGGGGGCCATTGGGTAATTCCTaGCAGTCTCCAGGCCTCACTTGCCCTCTGAACAAG | + |
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Preference number: 6 (lower is better) Translates to: AWFCPWGPLGNS*QSPGLTCPLNK Trigger: CTTGTTCAGAGGGCAAGTGAGGCCTGGAGACTGCAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | CTTCGCCGCCACTGGCTCCGTGAACTGGCTGTCAAGTaGACTTCCTTAGGGAAAGGGACTCCAAGGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: LRRHWLRELAVK*TSLGKGTPRTP Trigger: TGGAGTCCTTGGAGTCCCTTTCCCTAAGGAAGTCCACTTGACAGCCAGTTCACGGAGCCAGTGGCGGCGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 90 bp | CTCAGCTTCAGGTCCTGCTGGCAGCCAAGGACGGGTTTTCAGCAGTaGCTGTTAGCCGTTGGCAGTTTTCTCCTTTCCTCTAGGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LSFRSCWQPRTGFQQ*LLAVGSFLLSSRPW Trigger: CCAAGGCCTAGAGGAAAGGAGAAAACTGCCAACGGCTAACAGCAACTGCTGAAAACCCGTCCTTGGCTGCCAGCAGGACCTGAAGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 90 bp | TTAGAAGATCAAGACACTTGGGCCTGGTTCTGCCCCTGGGGGCCATaGGGTAATTCCTTGCAGTCTCCAGGCCTCACTTGCCCTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LEDQDTWAWFCPWGP*GNSLQSPGLTCPLN Trigger: GTTCAGAGGGCAAGTGAGGCCTGGAGACTGCAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 72 bp | ACGGCTCCCCTTAAGAGCATGGCCCTCGGTCCTGTCTaGCTGTTGCTTTTCAGAAGGTGGACTCACTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: TAPLKSMALGPV*LLLFRRWTHCV Trigger: TACACAGTGAGTCCACCTTCTGAAAAGCAACAGGCAGACAGGACCGAGGGCCATGCTCTTAAGGGGAGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | TTAGAAGATCAAGACACTTGGGCCTGGTTCTGCCCCTaGGGGCCATTGGGTAATTCCTTGCAGTCTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LEDQDTWAWFCP*GPLGNSLQSPG Trigger: GCCTGGAGACTGCAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 72 bp | CACTGGTTAGAAGATCAAGACACTTGGGCCTGGTTCTaGCCCTGGGGGCCATTGGGTAATTCCTTGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: HWLEDQDTWAWF*PWGPLGNSLQS Trigger: AGACTGCAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | GAGGTCCAGTGTTGGCCAGGAGCAGGACTGAAAGACTaGAACCATTCAGCTGTCTTTGCTGTTAGCCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: EVQCWPGAGLKD*NHSAVFAVSRW Trigger: CCAACGGCTAACAGCAAAGACAGCTGAATGGTTCCAGTCTTTCAGTCCTGCTCCTGGCCAACACTGGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518905.1 |
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| CDS CCA 72 bp | GTGACTGACTGGGCTTCGCATGGGTGTAAAATGGGTTaGCAGCTAAGGCCTTGGGAAGAAAGCCCAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VTDWASHGCKMG*QLRPWEESPGK Trigger: TTTGCCTGGGCTTTCTTCCCAAGGCCTTAGCTGCCAACCCATTTTACACCCATGCGAAGCCCAGTCAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS CAA 72 bp | AGGTCCTGCTGGCAGCCAAGGACGGGTTTTCAGCAGTaGCTGTTAGCCGTTGGCAGTTTTCTCCTTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSCWQPRTGFQQ*LLAVGSFLLSS Trigger: AGAGGAAAGGAGAAAACTGCCAACGGCTAACAGCAACTGCTGAAAACCCGTCCTTGGCTGCCAGCAGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 72 bp | AAACAGCCCACTGCTGTGGTTCCCAGCATGAGGGGGTaGTTTATCAAGGCGCTGGAAGAGGAGTTGGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: KQPTAVVPSMRG*FIKALEEELAR Trigger: TCTAGCCAACTCCTCTTCCAGCGCCTTGATAAACAACCCCCTCATGCTGGGAACCACAGCAGTGGGCTGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518905.1 ENST00000663441.1 |
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| CDS TCA 72 bp | ACTTTTCCATCCTCAGAGTCTTTCCAGAGAGAGAAGTaGCCTCAGCTTCAGGTCCTGCTGGCAGCCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TFPSSESFQREK*PQLQVLLAAKD Trigger: GTCCTTGGCTGCCAGCAGGACCTGAAGCTGAGGTCACTTCTCTCTCTGGAAAGACTCTGAGGATGGAAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 72 bp | GTAATTCCTTGCAGTCTCCAGGCCTCACTTGCCCTCTaGACAAGAAAGAGGCTGTTCTGGGTCATCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: VIPCSLQASLAL*TRKRLFWVIPP Trigger: TGGAGGGATGACCCAGAACAGCCTCTTTCTTGTTCAGAGGGCAAGTGAGGCCTGGAGACTGCAAGGAATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | AAAGCTCACTGGTTAGAAGATCAAGACACTTGGGCCTaGTTCTGCCCCTGGGGGCCATTGGGTAATTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: KAHWLEDQDTWA*FCPWGPLGNSL Trigger: CAAGGAATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTGAGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | TCCTGTAAAGCTCACTGGTTAGAAGATCAAGACACTTaGGCCTGGTTCTGCCCCTGGGGGCCATTGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: SCKAHWLEDQDT*AWFCPWGPLGN Trigger: ATTACCCAATGGCCCCCAGGGGCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTGAGCTTTACAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | CACGAACAATCAGTTGATCTCTTTCTTCGCCGCCACTaGCTCCGTGAACTGGCTGTCAAGTGGACTTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: HEQSVDLFLRRH*LRELAVKWTSL Trigger: TAAGGAAGTCCACTTGACAGCCAGTTCACGGAGCCAGTGGCGGCGAAGAAAGAGATCAACTGATTGTTCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | GCCTTCTGTGAGTCTCCTTTTCTTCAGGTGACTGACTaGGCTTCGCATGGGTGTAAAATGGGTTGGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: AFCESPFLQVTD*ASHGCKMGWQL Trigger: TAGCTGCCAACCCATTTTACACCCATGCGAAGCCCAGTCAGTCACCTGAAGAAAAGGAGACTCACAGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS CAA 90 bp | GGTAAGTCCTGGCCTTGCCTTTGTGGCAAATACAACCCCCTTGAATaGCTTGGCCCTTCTCAGCATTGCCTAATATTAGGGAGGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: GKSWPCLCGKYNPLE*LGPSQHCLILGRTP Trigger: AGGAGTCCTCCCTAATATTAGGCAATGCTGAGAAGGGCCAAGCAATTCAAGGGGGTTGTATTTGCCACAAAGGCAAGGCCAGGACTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS TCA 72 bp | GTCCTGGCCTTGCCTTTGTGGCAAATACAACCCCCTTaGATTGCTTGGCCCTTCTCAGCATTGCCTAATATT | + |
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Preference number: 6 (lower is better) Translates to: VLALPLWQIQPP*IAWPFSALPNI Trigger: AATATTAGGCAATGCTGAGAAGGGCCAAGCAATTCAAGGGGGTTGTATTTGCCACAAAGGCAAGGCCAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | TCAGCTAACATCCCCTCTGCAACACATGGAAGCATCTaGATGGTTTCCGTACAGGACCTAAAGAAGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SANIPSATHGSI*MVSVQDLKKCC Trigger: ACAGCACTTCTTTAGGTCCTGTACGGAAACCATCCAGATGCTTCCATGTGTTGCAGAGGGGATGTTAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | AGTAGCAGCTTGTCTTGTCTGTACAGTGGTAAGTCCTaGCCTTGCCTTTGTGGCAAATACAACCCCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SSSLSCLYSGKS*PCLCGKYNPLE Trigger: TTCAAGGGGGTTGTATTTGCCACAAAGGCAAGGCCAGGACTTACCACTGTACAGACAAGACAAGCTGCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 72 bp | TGGCCTTGCCTTTGTGGCAAATACAACCCCCTTGAATaGCTTGGCCCTTCTCAGCATTGCCTAATATTAGGG | + |
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Preference number: 6 (lower is better) Translates to: WPCLCGKYNPLE*LGPSQHCLILG Trigger: CCCTAATATTAGGCAATGCTGAGAAGGGCCAAGCAATTCAAGGGGGTTGTATTTGCCACAAAGGCAAGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 72 bp | TACAACCCCCTTGAATTGCTTGGCCCTTCTCAGCATTaGCTAATATTAGGGAGGACTCCTGTAAAGCTCACT | + |
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Preference number: 6 (lower is better) Translates to: YNPLELLGPSQH*LILGRTPVKLT Trigger: AGTGAGCTTTACAGGAGTCCTCCCTAATATTAGGCAATGCTGAGAAGGGCCAAGCAATTCAAGGGGGTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CCA 72 bp | TTGCCTAATATTAGGGAGGACTCCTGTAAAGCTCACTaGTTAGAAGATCAAGACACTTGGGCCTGGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LPNIREDSCKAH*LEDQDTWAWFC Trigger: GCAGAACCAGGCCCAAGTGTCTTGATCTTCTAACCAGTGAGCTTTACAGGAGTCCTCCCTAATATTAGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 72 bp | TTCCAAATCATCAAGGATGATACCACTAGTAGCAGCTaGTCTTGTCTGTACAGTGGTAAGTCCTGGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FQIIKDDTTSSS*SCLYSGKSWPC Trigger: GCAAGGCCAGGACTTACCACTGTACAGACAAGACAAGCTGCTACTAGTGGTATCATCCTTGATGATTTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS CAA 90 bp | CCTGTCTGCCTGTTGCTTTTCAGAAGGTGGACTCACTGTGTAACTTaGTCTTCCCTTACAGGTTTACAGAAAATAATCTCACTATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: PVCLLLFRRWTHCVT*SSLTGLQKIISLCL Trigger: AAGACATAGTGAGATTATTTTCTGTAAACCTGTAAGGGAAGACAAAGTTACACAGTGAGTCCACCTTCTGAAAAGCAACAGGCAGACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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| CDS GCA 72 bp | GATTTTCTCAGAACTTGTGCTATTATTGTTGGGAGGTaGCTCACGCTTTTAGACAGCAGAATAGTATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: DFLRTCAIIVGR*LTLLDSRIVFH Trigger: ATGGAATACTATTCTGCTGTCTAAAAGCGTGAGGCACCTCCCAACAATAATAGCACAAGTTCTGAGAAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS CAA 90 bp | TGTTGGGAGGTGCCTCACGCTTTTAGACAGCAGAATAGTATTCCATaGTATGACTTCACCATCATCTTATTAAATCTGTTCCTTACTGAT | + |
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Preference number: 6 (lower is better) Translates to: CWEVPHAFRQQNSIP*YDFTIILLNLFLTD Trigger: ATCAGTAAGGAACAGATTTAATAAGATGATGGTGAAGTCATACAATGGAATACTATTCTGCTGTCTAAAAGCGTGAGGCACCTCCCAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663441.1 |
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| CDS CAA 72 bp | CTGTTGCTTTTCAGAAGGTGGACTCACTGTGTAACTTaGTCTTCCCTTACAGGTTTACAGAAAATAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLLFRRWTHCVT*SSLTGLQKIIS Trigger: TGAGATTATTTTCTGTAAACCTGTAAGGGAAGACAAAGTTACACAGTGAGTCCACCTTCTGAAAAGCAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510576.6 |
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