Pregenerated sensors for CLK2 (Homo sapiens)
Ensembl gene IDs: ENSG00000176444Ensembl transcript IDs: ENST00000355560.4, ENST00000361168.9, ENST00000368361.9, ENST00000471047.1, ENST00000476983.5, ENST00000484699.1, ENST00000497188.1, ENST00000570684.1, ENST00000570717.5, ENST00000572269.5, ENST00000574445.5, ENST00000574877.1, ENST00000575900.1, ENST00000576584.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATGTCCGGCTGCGCCTCCTCCGCCGTCTGTGCTTCCTCCGGCTGCTaGGCTGGCTGCGGTAACTGCTGTTCTCCCGCTGATATTCATAGG | + |
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Preference number: 5 (lower is better) Translates to: MSGCASSAVCASSGC*AGCGNCCSPADIHR Trigger: CCTATGAATATCAGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACAGACGGCGGAGGAGGCGCAGCCGGACAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 90 bp | GGCCGCTGGGGCGGAGAAGCTGCTCCCAACACAATAAGCCCAACATaGCAGGGAGAGCACTGGGGGTCACAAATGCTCCGTGCCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: GRWGGEAAPNTISPT*QGEHWGSQMLRAHP Trigger: TGGATGGGCACGGAGCATTTGTGACCCCCAGTGCTCTCCCTGGCATGTTGGGCTTATTGTGTTGGGAGCAGCTTCTCCGCCCCAGCGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000484699.1 ENST00000497188.1 ENST00000570684.1 ENST00000574877.1 |
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| CDS GCA 90 bp | TGCGCCTCCTCCGCCGTCTGTGCTTCCTCCGGCTGCTGCGCTGGCTaGGGTAACTGCTGTTCTCCCGCTGATATTCATAGGAATGCCGAT | + |
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Preference number: 5 (lower is better) Translates to: CASSAVCASSGCCAG*GNCCSPADIHRNAD Trigger: ATCGGCATTCCTATGAATATCAGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACAGACGGCGGAGGAGGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 90 bp | AGCAAGGTCCCCATTAAAGAGTGGAGGCCGCTGGGGCGGAGAAGCTaGTCCCAACACAATAAGCCCAACATGCCAGGGAGAGCACTGGGG | + |
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Preference number: 5 (lower is better) Translates to: SKVPIKEWRPLGRRS*SQHNKPNMPGRALG Trigger: CCCCAGTGCTCTCCCTGGCATGTTGGGCTTATTGTGTTGGGAGCAGCTTCTCCGCCCCAGCGGCCTCCACTCTTTAATGGGGACCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000484699.1 ENST00000497188.1 ENST00000570684.1 ENST00000574877.1 |
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| CDS GCA 90 bp | AGTAGGCATCTCCCCGATCCCGGCTATAATCGTTGCGTCTGTAGCTaGCACAGTATCGCCGGTCATACACCCTCCGGTCGGACGAACGAT | + |
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Preference number: 5 (lower is better) Translates to: SRHLPDPGYNRCVCS*HSIAGHTPSGRTND Trigger: ATCGTTCGTCCGACCGGAGGGTGTATGACCGGCGATACTGTGGCAGCTACAGACGCAACGATTATAGCCGGGATCGGGGAGATGCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 90 bp | TCCGCCGTCTGTGCTTCCTCCGGCTGCTGCGCTGGCTGCGGTAACTaGTGTTCTCCCGCTGATATTCATAGGAATGCCGATAGTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: SAVCASSGCCAGCGN*CSPADIHRNADSLC Trigger: ACACAGACTATCGGCATTCCTATGAATATCAGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACAGACGGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 90 bp | GGGGGACAGACGATGATGGGGGACAGTGGAAGGGAACACGTCAGATaGAGTAAGGTGGATCGGTGTGAGAAGAGAGAGCGGCGCATAATC | + |
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Preference number: 5 (lower is better) Translates to: GGQTMMGDSGREHVR*SKVDRCEKRERRII Trigger: GATTATGCGCCGCTCTCTCTTCTCACACCGATCCACCTTACTGCATCTGACGTGTTCCCTTCCACTGTCCCCCATCATCGTCTGTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS GCA 90 bp | AGTCTGTGTCATAGTAGGCATCTCCCCGATCCCGGCTATAATCGTTaGGTCTGTAGCTGCCACAGTATCGCCGGTCATACACCCTCCGGT | + |
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Preference number: 5 (lower is better) Translates to: SLCHSRHLPDPGYNR*VCSCHSIAGHTPSG Trigger: ACCGGAGGGTGTATGACCGGCGATACTGTGGCAGCTACAGACGCAACGATTATAGCCGGGATCGGGGAGATGCCTACTATGACACAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 90 bp | CAGAGCAGAGAAGTGGTGTTGTTGCCAATGTCACCCACAACCCCATaGTCTACACAATGCCCTTCCGGGCAGACACAGATCTCCCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: QSREVVLLPMSPTTP*STQCPSGQTQISPC Trigger: GCAAGGGGAGATCTGTGTCTGCCCGGAAGGGCATTGTGTAGAGCATGGGGTTGTGGGTGACATTGGCAACAACACCACTTCTCTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS GCA 90 bp | ACAGGAACAGGGAGAGGCATGGGCAGAGCAGAGAAGTGGTGTTGTTaGCAATGTCACCCACAACCCCATGCTCTACACAATGCCCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: TGTGRGMGRAEKWCC*QCHPQPHALHNALP Trigger: CGGAAGGGCATTGTGTAGAGCATGGGGTTGTGGGTGACATTGGCAACAACACCACTTCTCTGCTCTGCCCATGCCTCTCCCTGTTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS CCA 90 bp | AAAGGCAGTTCACAAGCAAGGTCCCCATTAAAGAGTGGAGGCCGCTaGGGCGGAGAAGCTGCTCCCAACACAATAAGCCCAACATGCCAG | + |
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Preference number: 5 (lower is better) Translates to: KGSSQARSPLKSGGR*GGEAAPNTISPTCQ Trigger: CTGGCATGTTGGGCTTATTGTGTTGGGAGCAGCTTCTCCGCCCCAGCGGCCTCCACTCTTTAATGGGGACCTTGCTTGTGAACTGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000484699.1 ENST00000497188.1 ENST00000570684.1 ENST00000574877.1 |
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| CDS TCA 90 bp | GGCAAACTCAGTGCCCACCTCAGTGTTCATGCCCCAATGTTCAGCTaGGAACAAGGATACTGCTCACTTACCAGAGTCCTAGAGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GKLSAHLSVHAPMFS*EQGYCSLTRVLEGL Trigger: CAGGCCCTCTAGGACTCTGGTAAGTGAGCAGTATCCTTGTTCTCAGCTGAACATTGGGGCATGAACACTGAGGTGGGCACTGAGTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484699.1 ENST00000570684.1 |
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| CDS GCA 90 bp | GCCCTTCAAGAGTCGGAGAGCTTCCAAGAAAGTAGGCAAACTCAGTaGCCACCTCAGTGTTCATGCCCCAATGTTCAGCTGAGAACAAGG | + |
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Preference number: 5 (lower is better) Translates to: ALQESESFQESRQTQ*PPQCSCPNVQLRTR Trigger: CCTTGTTCTCAGCTGAACATTGGGGCATGAACACTGAGGTGGGCACTGAGTTTGCCTACTTTCTTGGAAGCTCTCCGACTCTTGAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484699.1 ENST00000570684.1 |
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| CDS TCA 90 bp | TCAATTCTCAACAGCAACTCAAACCACCCAGATAAACAACACCACTaGGAAAAGGCAAGAGGCTGTGACTCAGGTTGGCTTGGGACGTTA | + |
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Preference number: 5 (lower is better) Translates to: SILNSNSNHPDKQHH*EKARGCDSGWLGTL Trigger: TAACGTCCCAAGCCAACCTGAGTCACAGCCTCTTGCCTTTTCTCAGTGGTGTTGTTTATCTGGGTGGTTTGAGTTGCTGTTGAGAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS GCA 72 bp | GGCTGCGCCTCCTCCGCCGTCTGTGCTTCCTCCGGCTaGTGCGCTGGCTGCGGTAACTGCTGTTCTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GCASSAVCASSG*CAGCGNCCSPA Trigger: AGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACAGACGGCGGAGGAGGCGCAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 72 bp | TGCGCCTCCTCCGCCGTCTGTGCTTCCTCCGGCTGCTaGGCTGGCTGCGGTAACTGCTGTTCTCCCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CASSAVCASSGC*AGCGNCCSPAD Trigger: ATCAGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACAGACGGCGGAGGAGGCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 72 bp | CTCCCCGATCCCGGCTATAATCGTTGCGTCTGTAGCTaGCACAGTATCGCCGGTCATACACCCTCCGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: LPDPGYNRCVCS*HSIAGHTPSGR Trigger: CCGACCGGAGGGTGTATGACCGGCGATACTGTGGCAGCTACAGACGCAACGATTATAGCCGGGATCGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 72 bp | TCCGCCGTCTGTGCTTCCTCCGGCTGCTGCGCTGGCTaGGGTAACTGCTGTTCTCCCGCTGATATTCATAGG | + |
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Preference number: 6 (lower is better) Translates to: SAVCASSGCCAG*GNCCSPADIHR Trigger: CCTATGAATATCAGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACAGACGGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 72 bp | CCCATTAAAGAGTGGAGGCCGCTGGGGCGGAGAAGCTaGTCCCAACACAATAAGCCCAACATGCCAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: PIKEWRPLGRRS*SQHNKPNMPGR Trigger: TCTCCCTGGCATGTTGGGCTTATTGTGTTGGGAGCAGCTTCTCCGCCCCAGCGGCCTCCACTCTTTAATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000484699.1 ENST00000497188.1 ENST00000570684.1 ENST00000574877.1 |
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| CDS GCA 72 bp | TTGCCAATGTCACCCACAACCCCATGCTCTACACAATaGCCTTCCGGGCAGACACAGATCTCCCCTTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LPMSPTTPCSTQ*PSGQTQISPCP Trigger: GGGGCAAGGGGAGATCTGTGTCTGCCCGGAAGGGCATTGTGTAGAGCATGGGGTTGTGGGTGACATTGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS GCA 72 bp | TGTGCTTCCTCCGGCTGCTGCGCTGGCTGCGGTAACTaGTGTTCTCCCGCTGATATTCATAGGAATGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: CASSGCCAGCGN*CSPADIHRNAD Trigger: ATCGGCATTCCTATGAATATCAGCGGGAGAACAGCAGTTACCGCAGCCAGCGCAGCAGCCGGAGGAAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS CCA 72 bp | TCACAAGCAAGGTCCCCATTAAAGAGTGGAGGCCGCTaGGGCGGAGAAGCTGCTCCCAACACAATAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SQARSPLKSGGR*GGEAAPNTISP Trigger: TGGGCTTATTGTGTTGGGAGCAGCTTCTCCGCCCCAGCGGCCTCCACTCTTTAATGGGGACCTTGCTTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000484699.1 ENST00000497188.1 ENST00000570684.1 ENST00000574877.1 |
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| CDS GCA 72 bp | ACGATGATGGGGGACAGTGGAAGGGAACACGTCAGATaGAGTAAGGTGGATCGGTGTGAGAAGAGAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: TMMGDSGREHVR*SKVDRCEKRER Trigger: CCGCTCTCTCTTCTCACACCGATCCACCTTACTGCATCTGACGTGTTCCCTTCCACTGTCCCCCATCATCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS CAA 90 bp | AACAGGAACAGGGAGAGGCATGGGCAGAGCAGAGAAGTGGTGTTGTaGCCAATGTCACCCACAACCCCATGCTCTACACAATGCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NRNRERHGQSREVVL*PMSPTTPCSTQCPS Trigger: GGAAGGGCATTGTGTAGAGCATGGGGTTGTGGGTGACATTGGCAACAACACCACTTCTCTGCTCTGCCCATGCCTCTCCCTGTTCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS GCA 72 bp | CATAGTAGGCATCTCCCCGATCCCGGCTATAATCGTTaGGTCTGTAGCTGCCACAGTATCGCCGGTCATACA | + |
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Preference number: 6 (lower is better) Translates to: HSRHLPDPGYNR*VCSCHSIAGHT Trigger: TGTATGACCGGCGATACTGTGGCAGCTACAGACGCAACGATTATAGCCGGGATCGGGGAGATGCCTACTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000355560.4 ENST00000361168.9 ENST00000368361.9 ENST00000471047.1 ENST00000476983.5 ENST00000484699.1 ENST00000570684.1 ENST00000570717.5 ENST00000572269.5 ENST00000574445.5 ENST00000575900.1 ENST00000576584.1 |
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| CDS GCA 72 bp | GAAGTGGTGTTGTTGCCAATGTCACCCACAACCCCATaGTCTACACAATGCCCTTCCGGGCAGACACAGATC | + |
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Preference number: 6 (lower is better) Translates to: EVVLLPMSPTTP*STQCPSGQTQI Trigger: GATCTGTGTCTGCCCGGAAGGGCATTGTGTAGAGCATGGGGTTGTGGGTGACATTGGCAACAACACCACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS GCA 72 bp | GGGAGAGGCATGGGCAGAGCAGAGAAGTGGTGTTGTTaGCAATGTCACCCACAACCCCATGCTCTACACAAT | + |
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Preference number: 6 (lower is better) Translates to: GRGMGRAEKWCC*QCHPQPHALHN Trigger: ATTGTGTAGAGCATGGGGTTGTGGGTGACATTGGCAACAACACCACTTCTCTGCTCTGCCCATGCCTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS TCA 72 bp | AGTGCCCACCTCAGTGTTCATGCCCCAATGTTCAGCTaGGAACAAGGATACTGCTCACTTACCAGAGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: SAHLSVHAPMFS*EQGYCSLTRVL Trigger: TAGGACTCTGGTAAGTGAGCAGTATCCTTGTTCTCAGCTGAACATTGGGGCATGAACACTGAGGTGGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000484699.1 ENST00000570684.1 |
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| CDS GCA 72 bp | GAAAGTAGGCAAACTCAGTGCCCACCTCAGTGTTCATaGCCCAATGTTCAGCTGAGAACAAGGATACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: ESRQTQCPPQCS*PNVQLRTRILL Trigger: GAGCAGTATCCTTGTTCTCAGCTGAACATTGGGGCATGAACACTGAGGTGGGCACTGAGTTTGCCTACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000484699.1 ENST00000570684.1 |
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| CDS TCA 72 bp | AACAGCAACTCAAACCACCCAGATAAACAACACCACTaGGAAAAGGCAAGAGGCTGTGACTCAGGTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: NSNSNHPDKQHH*EKARGCDSGWL Trigger: AAGCCAACCTGAGTCACAGCCTCTTGCCTTTTCTCAGTGGTGTTGTTTATCTGGGTGGTTTGAGTTGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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| CDS CAA 72 bp | GTTAGGATGGCTATGGGACCATTACAGGCTATAGGATaGTTACGATTTGGCTTGTACATCGCTCTTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: VRMAMGPLQAIG*LRFGLYIALVA Trigger: GGCTACAAGAGCGATGTACAAGCCAAATCGTAACAATCCTATAGCCTGTAATGGTCCCATAGCCATCCTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497188.1 ENST00000574877.1 |
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