RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLIP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000105270

Ensembl transcript IDs: ENST00000360535.9, ENST00000585466.1, ENST00000590559.2, ENST00000592017.5, ENST00000593074.5

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTaGCTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCT +
Preference number: 1 (lower is better)
Translates to: GVSTLDVLLGISISG*LRAPRVSGDASGDS
Trigger: AGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
3UTR TCA 90 bp ATGGGAATTCCTGTGTGGGGTTTCCTGGTGCCTGTGAATAGGGCTTaGGGTGTCTGGGAGCCTGGAATGCATATCCTGACTGCAGTCTCC +
Preference number: 1 (lower is better)
Translates to: MGIPVWGFLVPVNRA*GVWEPGMHILTAVS
Trigger: GGAGACTGCAGTCAGGATATGCATTCCAGGCTCCCAGACACCTCAAGCCCTATTCACAGGCACCAGGAAACCCCACACAGGAATTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 90 bp GGGCCTTGGGGCCTTCCATTTATTAGAGATGGAGGCTTTAGGATTTaGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTTGGTGTCTTGAA +
Preference number: 1 (lower is better)
Translates to: GPWGLPFIRDGGFRI*GSLRAGALGIWCLE
Trigger: TTCAAGACACCAAATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCTAATAAATGGAAGGCCCCAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 90 bp CAGTCTCCTCCATACCAGGCACAAGGACCTCATGATTGGGTTTCCTaGGGACTTGGGATTGGATTTTCAAATTTGGGATTCCCTGGGGAT +
Preference number: 1 (lower is better)
Translates to: QSPPYQAQGPHDWVS*GLGIGFSNLGFPGD
Trigger: ATCCCCAGGGAATCCCAAATTTGAAAATCCAATCCCAAGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCCTGGTATGGAGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 90 bp ATAGGGACTAGCCTGAAGGTGCTACTCAGGGAATCTCTTTCTGGGTaGCATGGGGTCTGTATTTGGGGGTTATTATGGGAGTATCTGTTA +
Preference number: 1 (lower is better)
Translates to: IGTSLKVLLRESLSG*HGVCIWGLLWEYLL
Trigger: TAACAGATACTCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTGAGTAGCACCTTCAGGCTAGTCCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 90 bp ATTATGGGAGTATCTGTTAATAATGGGGCCTCAATGATCGAGGGCTaGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCT +
Preference number: 1 (lower is better)
Translates to: IMGVSVNNGASMIEG*LTGVSTLDVLLGIS
Trigger: AGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAGGCCCCATTATTAACAGATACTCCCATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 90 bp TTCTGTTGTAATGCATTATGTGGAGAGGGTCACCATCATTTGGGGTaGTATGGAAATCTGTTAATCTGGGAATCTGCTCTGAGGGGTTGG +
Preference number: 1 (lower is better)
Translates to: FCCNALCGEGHHHLG*YGNLLIWESALRGW
Trigger: CCAACCCCTCAGAGCAGATTCCCAGATTAACAGATTTCCATATCACCCCAAATGATGGTGACCCTCTCCACATAATGCATTACAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 90 bp CTTAAGGGGCAGTGTTTGTTAATGGGGAGGTTTCTGATCCAGGGTTaGGTGATTCAAGAATGTTCTGTTGTAATGCATTATGTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: LKGQCLLMGRFLIQG*VIQECSVVMHYVER
Trigger: CCTCTCCACATAATGCATTACAACAGAACATTCTTGAATCACCCAACCCTGGATCAGAAACCTCCCCATTAACAAACACTGCCCCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR-3UTR TCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTCTAAGGGCTTCAGGGTaGCCATGGGGTCACGACATC +
Preference number: 2 (lower is better)
Translates to: RDGGFRIWGSLRAGALGILRASG*PWGHDI
Trigger: GATGTCGTGACCCCATGGTCACCCTGAAGCCCTTAG...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR-3UTR CCA 90 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTTGGGGGTTATTATGGGATCAATGATCGAGGGCTaGCTAACAGGGGTCTCTACT +
Preference number: 2 (lower is better)
Translates to: QGISFWVTWGLYLGVIMGSMIEG*LTGVST
Trigger: AGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGA...TCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 72 bp GAGAATTTTCTGGGAGTCTGGCCAGCACAGGAGCTGTaGGCCATGTGGGGTGGGCTTCATACAAGGCACTGG +
Preference number: 3 (lower is better)
Translates to: ENFLGVWPAQEL*AMWGGLHTRHW
Trigger: CCAGTGCCTTGTATGAAGCCCACCCCACATGGCCCACAGCTCCTGTGCTGGCCAGACTCCCAGAAAATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 72 bp GGGCTTGAGGTGTCTGGGAGCCTGGAATGCATATCCTaGCTGCAGTCTCCTCCATACCAGGCACAAGGACCT +
Preference number: 3 (lower is better)
Translates to: GLEVSGSLECIS*LQSPPYQAQGP
Trigger: AGGTCCTTGTGCCTGGTATGGAGGAGACTGCAGTCAGGATATGCATTCCAGGCTCCCAGACACCTCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 72 bp GGATGGGAATTCCTGTGTGGGGTTTCCTGGTGCCTGTaGATAGGGCTTGAGGTGTCTGGGAGCCTGGAATGC +
Preference number: 3 (lower is better)
Translates to: GWEFLCGVSWCL*IGLEVSGSLEC
Trigger: GCATTCCAGGCTCCCAGACACCTCAAGCCCTATTCACAGGCACCAGGAAACCCCACACAGGAATTCCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR GCA 72 bp TTGAGGTGTCTGGGAGCCTGGAATGCATATCCTGACTaGAGTCTCCTCCATACCAGGCACAAGGACCTCATG +
Preference number: 3 (lower is better)
Translates to: LRCLGAWNAYPD*SLLHTRHKDLM
Trigger: CATGAGGTCCTTGTGCCTGGTATGGAGGAGACTGCAGTCAGGATATGCATTCCAGGCTCCCAGACACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 72 bp ACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTaGCTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGT +
Preference number: 3 (lower is better)
Translates to: TLDVLLGISISG*LRAPRVSGDAS
Trigger: ACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
3UTR CCA 72 bp ATCGGGGTTCCAGGATTTGAGATCCCCTCAGGGCCTTaGGGCCTTCCATTTATTAGAGATGGAGGCTTTAGG +
Preference number: 3 (lower is better)
Translates to: IGVPGFEIPSGP*GLPFIRDGGFR
Trigger: CCTAAAGCCTCCATCTCTAATAAATGGAAGGCCCCAAGGCCCTGAGGGGATCTCAAATCCTGGAACCCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR-3UTR CAA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTGGATTCCCTGGGGATTaGGGATTCCATGATTTGGGG +
Preference number: 3 (lower is better)
Translates to: RDGGFRIWGSLRAGALGIGFPGD*GFHDLG
Trigger: CCCCAAATCATGGAATCCCAAATCCCCAGGGAATCC...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR-3UTR CAA 90 bp CAGTCTCCTCCATACCAGGCACAAGGACCTCATGATTGGGTTTCCTGGGGACTTCTTAAGGGGCAGTGTTaGTTAATGGGGAGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: QSPPYQAQGPHDWVSWGLLKGQC*LMGRFL
Trigger: CAGAAACCTCCCCATTAACAAACACTGCCCCTTAAG...AAGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCCTGGTATGGAGGAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR-3UTR CAA 90 bp CAGTCTCCTCCATACCAGGCACAAGGACCTCATGATTGGGTTTCCTGGGGACTTGTTTCTGATCCAGGGTaGGGTGATTCAAGAATGTTC +
Preference number: 3 (lower is better)
Translates to: QSPPYQAQGPHDWVSWGLVSDPG*GDSRMF
Trigger: GAACATTCTTGAATCACCCAACCCTGGATCAGAAAC...AAGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCCTGGTATGGAGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR-3UTR CAA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGATTGGGATTCCATGATTaGGGGGTCCTAGGAGTTACG +
Preference number: 3 (lower is better)
Translates to: WCLETHGLGALKFSSFQGLGFHD*GVLGVT
Trigger: CGTAACTCCTAGGACCCCCAAATCATGGAATCCCAA...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 72 bp AGCCTGAAGGTGCTACTCAGGGAATCTCTTTCTGGGTaGCATGGGGTCTGTATTTGGGGGTTATTATGGGAG +
Preference number: 3 (lower is better)
Translates to: SLKVLLRESLSG*HGVCIWGLLWE
Trigger: CTCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTGAGTAGCACCTTCAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 72 bp GTATCTGTTAATAATGGGGCCTCAATGATCGAGGGCTaGCTAACAGGGGTCTCTACTCTGGATGTGTTACTG +
Preference number: 3 (lower is better)
Translates to: VSVNNGASMIEG*LTGVSTLDVLL
Trigger: CAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAGGCCCCATTATTAACAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CCA 72 bp CAGTCTCCTCCATACCAGGCACAAGGACCTCATGATTaGGTTTCCTGGGGACTTGGGATTGGATTTTCAAAT +
Preference number: 3 (lower is better)
Translates to: QSPPYQAQGPHD*VSWGLGIGFSN
Trigger: ATTTGAAAATCCAATCCCAAGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCCTGGTATGGAGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR TCA 72 bp AATGCATTATGTGGAGAGGGTCACCATCATTTGGGGTaGTATGGAAATCTGTTAATCTGGGAATCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: NALCGEGHHHLG*YGNLLIWESAL
Trigger: CAGAGCAGATTCCCAGATTAACAGATTTCCATATCACCCCAAATGATGGTGACCCTCTCCACATAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGCCCAGCGCCAGCAGCTaGTGCGAGAGGCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGPSASS*CERRTA
Trigger: AGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCTGGG...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGTGTGCGCCCAGCGCCTaGCACCTCCCCCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQCAPSA*HLPQAQ
Trigger: CTGGGCCTGGGGGAGGTGGCAGGCGCTGGGCGCACA...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCGCGTCCGCAGCTCCTTaGCCACCAGTGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSASAAP*PPVPPL
Trigger: CAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGC...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGGTGAGCTGTCCTTGGTaGTCGGGGCCCCAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQVSCPW*SGPQVR
Trigger: GCGGACCTGGGGCCCCGACCACCAAGGACAGCTCAC...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp CTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGGTCCGGACTGTGGTaGAGGTGCGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LRAPRVSGDASGDSVSLSGSGLW*RCVWAA
Trigger: CGCAGCCCAAACGCACCTTCACCACAGTCCGGACCC...TGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCTGCACAACAGGCTTCTaGCGGCGCTCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVCTTGF*RRSWVG
Trigger: CCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCA...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGCGCAGCGTCACATCTaGGCCCAGCGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVAQRHI*AQRQQL
Trigger: CAGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCGC...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGCCACCCACTGGCCGCTaGCAAACTCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQPPTGR*QTPWSH
Trigger: GTGGGACCACGGAGTTTGCCAGCGGCCAGTGGGTGG...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCGAGGCAGAGGTCAGCTaGAGAGGGTGCCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GCVTGNLYLRVTQGSSGVEAEVS*RGCPAG
Trigger: GCCTGCCGGGCACCCTCTCCAGCTGACCTCTGCCTC...GACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS-3UTR TCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCTGCGGCCTTTGCCGGTaGCACGGGAGAAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSCGLCR*HGRSPS
Trigger: GGATGGACTTCTCCCGTGTCACCGGCAAAGGCCGCA...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGGGTCCGGACTGTGGTaGAGGTGCGTTTGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLGSGLW*RCVWAA
Trigger: CGCAGCCCAAACGCACCTTCACCACAGTCCGGACCC...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTATGCACAACAGGCTTCTaGCGGCGCTCCTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLCTTGF*RRSWVG
Trigger: CCCCACCCAGGAGCGCCGGCAGAAGCCTGTTGTGCA...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCAGCGCCAGCAGCTGCTaGGAGAGGCGCACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGSASSC*ERRTAA
Trigger: GGCAGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCT...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGAGCGCCAGCAGCTGCTaGGAGAGGCGCACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGSASSC*ERRTAA
Trigger: GGCAGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCT...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGCCCCGTCACGCTGCTaGAAGCTGCCCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVAPSRC*KLPRDG
Trigger: CCCATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGC...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGAGTCATGCTGAGTTTGGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTAAGCGCACGATCCCCTaGTTCTGGCCCGCGACAAGG +
Preference number: 4 (lower is better)
Translates to: GVMLSLGTCSEGAVVSCPKRTIP*FWPATR
Trigger: CCTTGTCGCGGGCCAGAAGCAGGGGATCGTGCGCTT...AGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAACTCAGCATGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCTCCACGCCCACCCACTaGCCGCTGGCAAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: GCVTGNLYLRVTQGSSGVSTPTH*PLANSV
Trigger: CACGGAGTTTGCCAGCGGCCAGTGGGTGGGCGTGGA...GACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGCAGGTGCCGAGGGGTaGACAACAGGCTTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQAGAEG*TTGFCR
Trigger: CCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCTGC...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGCCCAGCGCCAGCAGCTaGTGCGAGAGGCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQPSASS*CERRTA
Trigger: AGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCTGGG...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGCTGGAAGCAGCGATGTaGAGGGCTGAGCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQLEAAM*RAEPWL
Trigger: CAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAG...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGTCCACGCCCACCCACTaGCCGCTGGCAAACTCCGTG +
Preference number: 4 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQSTPTH*PLANSV
Trigger: CACGGAGTTTGCCAGCGGCCAGTGGGTGGGCGTGGA...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGCTCCAACCTCAGCCTTaGCCCCGTCACGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: CYWESLSQGDSGLLGCQELQPQP*PRHAAA
Trigger: TGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAG...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGCTCCAACCTCAGCCTTaGCCCCGTCACGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGLQPQP*PRHAAA
Trigger: TGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAG...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCACCCGCGACAAGGACCTaGTCTCCAACCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LRAPRVSGDASGDSVSLSPATRT*SPTSAL
Trigger: CAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGG...TGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GGAGTCATGCTGAGTTTGGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTTCTCCCTCGAGCTGTTaGTCTGGCCCAGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GVMLSLGTCSEGAVVSCPSPSSC*SGPGAV
Trigger: CACAGCACCTGGGCCAGACCAACAGCTCGAGGGAGA...AGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAACTCAGCATGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGTCGTGAGCTGTCCTTaGTGGTCGGGGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQVVSCP*WSGPQV
Trigger: GACCTGGGGCCCCGACCACCAAGGACAGCTCACGAC...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGTTCCAGGGCCCCGGGTaGCCTCCGCGCAACTGGATC +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGFQGPG*PPRNWI
Trigger: GATCCAGTTGCGCGGAGGCCACCCGGGGCCCTGGAA...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS-3UTR TCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCTCGGGGATGGTGGTCTaGGGGTCAAACAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVSGMVV*GSNRIS
Trigger: GGAGATCCTGTTTGACCCTCAGACCACCATCCCCGA...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGCATAGTTGGGTAGCGTaGCCTTGGGGAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGHSWVA*PWGGRK
Trigger: CTTGCGCCCTCCCCAAGGTCACGCTACCCAACTATG...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCGATCCGCCAATCCTCTaGATACGGGATGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVDPPIL*IRDAGA
Trigger: CGCACCAGCATCCCGTATTCAGAGGATTGGCGGATC...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGCGCAGCGTCACATCTaGGCCCAGCGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQAQRHI*AQRQQL
Trigger: CAGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCGC...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGTGTTGGTCCAGCGGCTaGGCAGCGTCACATCTGCGC +
Preference number: 4 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQCWSSG*AASHLR
Trigger: GCGCAGATGTGACGCTGCGCAGCCGCTGGACCAACA...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGCTGGAAGCAGCGATGTaGAGGGCTGAGCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGLEAAM*RAEPWL
Trigger: CAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAG...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGCACCAGTGCCGCCTCTaGCTTGTCCAGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVHQCRL*LVQGHV
Trigger: GACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTG...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGCACCAGTGCCGCCTCTaGCTTGTCCAGGGACATGTC +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGHQCRL*LVQGHV
Trigger: GACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTG...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGAGTCATGCTGAGTTTGGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTCACAGAACCGCAGTGTaGCCGTCTTCTGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GVMLSLGTCSEGAVVSCPHRTAV*PSSGHP
Trigger: TGGATGGCCAGAAGACGGGCACACTGCGGTTCTGTG...AGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAACTCAGCATGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCCACGCTGCTGCAAGCTaGCCAGAGATGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSHAAAS*PEMGMM
Trigger: CATCATCCCCATCTCTGGGCAGCTTGCAGCAGCGTG...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTAAGCGCACGATCCCCTaGTTCTGGCCCGCGACAAGG +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCKRTIP*FWPATR
Trigger: CCTTGTCGCGGGCCAGAAGCAGGGGATCGTGCGCTT...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCACAGAGCCATCATGCTTaGCTGTGGGCTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRAPRVSGDASGDSVSLSQSHHA*LWAGPA
Trigger: AGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTG...TGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGACTGTGGGAGCAATaGGGTGTCGGTGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSRLWEQ*GVGVRG
Trigger: TCCCCTGACACCGACACCCCATTGCTCCCACAGTCT...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGTCGGGCAGACAGCGCTaGGGACCAAAGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: CYWESLSQGDSGLLGCQESGRQR*GPKWRL
Trigger: CAGTCTCCACTTTGGTCCCCAGCGCTGTCTGCCCGA...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGATCTTGTGCTGGACTTaGGGCACCCACTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQILCWT*GTHWRT
Trigger: TGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGAT...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGTGCAGGGCTGAGCCGTaGTTGAAGTCACTGCACGTG +
Preference number: 4 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQCRAEP*LKSLHV
Trigger: CACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCA...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGAGTGTGCCCGTCTTCTaGCCATCCAGCAGCACGCGG +
Preference number: 4 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGSVPVF*PSSSTR
Trigger: CCGCGTGCTGCTGGATGGCCAGAAGACGGGCACACT...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTAGTGTGCCCGTCTTCTaGCCATCCAGCAGCACGCGG +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGSVPVF*PSSSTR
Trigger: CCGCGTGCTGCTGGATGGCCAGAAGACGGGCACACT...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTCCACCCACTGGCCGCTaGCAAACTCCGTGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: RDGGFRIWGSLRAGALGIPPTGR*QTPWSH
Trigger: GTGGGACCACGGAGTTTGCCAGCGGCCAGTGGGTGG...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGGTGCGTCCACTGCCTTaGAGATCTTGGACACGGAGG +
Preference number: 4 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQVRPLP*RSWTRR
Trigger: CCTCCGTGTCCAAGATCTCCAAGGCAGTGGACGCAC...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGTGCGTCCACTGCCTTaGAGATCTTGGACACGGAGG +
Preference number: 4 (lower is better)
Translates to: LRAPRVSGDASGDSVSLSVRPLP*RSWTRR
Trigger: CCTCCGTGTCCAAGATCTCCAAGGCAGTGGACGCAC...TGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTACCCGCGACAAGGACCTaGTCTCCAACCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLPATRT*SPTSAL
Trigger: CAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGG...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCCCCCGGGGGAATCAGTaGATCCGCCAATCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSPRGNQ*IRQSSE
Trigger: TTCAGAGGATTGGCGGATCCACTGATTCCCCCGGGG...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCGGGCACAGGGGAGTTTaGGACGTGTGTACTCTAGGG +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVGHRGV*DVCTLG
Trigger: CCCTAGAGTACACACGTCCCAAACTCCCCTGTGCCC...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGCGCGCAACTGGATCTTaGGCAACCATAGGGACCCCC +
Preference number: 4 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVRATGS*ATIGTP
Trigger: GGGGGTCCCTATGGTTGCCCAAGATCCAGTTGCGCG...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCTGGCCTCCGCGCAACTaGATCTTGGGCAACCATAGG +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSWPPRN*ILGNHR
Trigger: CCTATGGTTGCCCAAGATCCAGTTGCGCGGAGGCCA...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS-3UTR TCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTGCTTGGGAGGGCAGATaGAGTACCGAACGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCAWEGR*STERPQ
Trigger: TTGGGGGCGTTCGGTACTTCATCTGCCCTCCCAAGC...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTTGCGGCCTTTGCCGGTaGCACGGGAGAAGTCCATCC +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQICGLCR*HGRSPS
Trigger: GGATGGACTTCTCCCGTGTCACCGGCAAAGGCCGCA...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTCGGGGTTCCAGGATTTaGGATCCCCTCAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGRGSRI*DPLRAL
Trigger: CAAGGCCCTGAGGGGATCTCAAATCCTGGAACCCCG...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGCAGGTGCCGAGGGGTaGACAACAGGCTTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQAGAEG*TTGFCR
Trigger: CCGGCAGAAGCCTGTTGTGCACCCCTCGGCACCTGC...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTGTTGGTCCAGCGGCTaGGCAGCGTCACATCTGCGC +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGCWSSG*AASHLR
Trigger: GCGCAGATGTGACGCTGCGCAGCCGCTGGACCAACA...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTGCAGGGTTGGCGCCGTaGTCCAGCAAACATTTGGCG +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCAGLAP*SSKHLA
Trigger: CGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGC...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCCAGGCGCAAGCCCAGTaGGCTAAGCATGAGATTGCC +
Preference number: 4 (lower is better)
Translates to: GCVTGNLYLRVTQGSSGVQAQAQ*AKHEIA
Trigger: GGCAATCTCATGCTTAGCGCACTGGGCTTGCGCCTG...GACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGCGCTGCCATCGTTCTTaGCCTCAGGTTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVRCHRS*PQVRPA
Trigger: AGCTGGACGAACCTGAGGGCAAGAACGATGGCAGCG...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CAGTCTCCTCCATACCAGGCACAAGGACCTCATGATTGGGTTTCCTGGGGACTTGAACGCCCCCAACGCTaGCATCGTTCTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QSPPYQAQGPHDWVSWGLERPQR*HRSCPQ
Trigger: CTGAGGGCAAGAACGATGGCAGCGTTGGGGGCGTTC...AAGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCCTGGTATGGAGGAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTGAACGCCCCCAACGCTaGCATCGTTCTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCERPQR*HRSCPQ
Trigger: CTGAGGGCAAGAACGATGGCAGCGTTGGGGGCGTTC...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTTTGGCCCCGTCACGCTaGTGCAAGCTGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGLAPSR*CKLPRD
Trigger: ATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAA...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGCCTCTGAATACGGGATaGTGGTGCGAAGACCCCATG +
Preference number: 4 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQPLNTG*WCEDPM
Trigger: CATGGGGTCTTCGCACCAGCATCCCGTATTCAGAGG...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCCCTCTGAATACGGGATaGTGGTGCGAAGACCCCATG +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSPLNTG*WCEDPM
Trigger: CATGGGGTCTTCGCACCAGCATCCCGTATTCAGAGG...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGACTTGGGGCACCCACTaGCGCACAATGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: CYWESLSQGDSGLLGCQETWGTH*RTMANS
Trigger: GCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGT...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAATCTTGTGCTGGACTTaGGGCACCCACTGGCGCACA +
Preference number: 4 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLILCWT*GTHWRT
Trigger: TGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGAT...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCACGTCTATCTTGTGCTaGACTTGGGGCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVTSILC*TWGTHW
Trigger: CCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGT...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCCTCAGCGCAGGGTTaGCGCCGTGCTCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSSSAQG*RRAPAN
Trigger: GTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGA...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGCATGTCCATAGGATCTaGGACCACCTCCGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGHVHRI*DHLRRH
Trigger: GTGCCGGCGGAGGTGGTCCCAGATCCTATGGACATG...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTTGGGGGTTATTATGGGAGCGTCCGCAGCTCCTTaGCCACCAGTGCCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QGISFWVTWGLYLGVIMGASAAP*PPVPPL
Trigger: CAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGC...TCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGCGCTGGCAAACTCCGTaGTCCCACAGAACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGRWQTP*SHRTAV
Trigger: CACTGCGGTTCTGTGGGACCACGGAGTTTGCCAGCG...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTCGCTGGCAAACTCCGTaGTCCCACAGAACCGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGRWQTP*SHRTAV
Trigger: CACTGCGGTTCTGTGGGACCACGGAGTTTGCCAGCG...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCACGATCCCCTGCTTCTaGCCCGCGACAAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSTIPCF*PATRTW
Trigger: CCAGGTCCTTGTCGCGGGCCAGAAGCAGGGGATCGT...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCCTGAATACGGGATGCTaGTGCGAAGACCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSLNTGC*CEDPMP
Trigger: AGGCATGGGGTCTTCGCACCAGCATCCCGTATTCAG...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCCCAGCACAGGAGCTGTaGGCCATGTGGGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGPAQEL*AMWGGL
Trigger: AAGCCCACCCCACATGGCCCACAGCTCCTGTGCTGG...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTCTGGCCCAGGTGCTGTaGGGTCCTTTGAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RDGGFRIWGSLRAGALGILAQVL*GPLRPV
Trigger: CACTGGCCTCAAAGGACCCCACAGCACCTGGGCCAG...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTTGGGGGTTATTATGGGACCGCCCTGGACCCCCTaGGCCTTCAGGTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGISFWVTWGLYLGVIMGPPWTP*AFRFSL
Trigger: GAGGGAGAACCTGAAGGCCCAGGGGGTCCAGGGCGG...TCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCACCTTCAGGCAAATCCTaGAGGCAGAGGTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LRAPRVSGDASGDSVSLSPSGKS*RQRSAG
Trigger: TCCAGCTGACCTCTGCCTCCAGGATTTGCCTGAAGG...TGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS-3UTR TCA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCATAGTTGGGTAGCGTaGCCTTGGGGAGGGCGCAAG +
Preference number: 4 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSHSWVA*PWGGRK
Trigger: CTTGCGCCCTCCCCAAGGTCACGCTACCCAACTATG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTGCTTGGGAGGGCAGATaGAGTACCGAACGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIAWEGR*STERPQ
Trigger: TTGGGGGCGTTCGGTACTTCATCTGCCCTCCCAAGC...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTTTTGGGGACATGCAGTaGAGGGGCAGTCGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGFGDMQ*RGSREL
Trigger: CAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAA...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCCGTGGGCCCCAGCTTTaGACGCATAGTGGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSRGPQL*THSGAV
Trigger: CACTGCTCCACTATGCGTGCAAAGCTGGGGCCCACG...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGGCAGGGTTGGCGCCGTaGTCCAGCAAACATTTGGCG +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGAGLAP*SSKHLA
Trigger: CGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGC...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCATGGGGTCTTCTTCTTaGCTTTGTGTTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSMGSSS*LCVPCG
Trigger: GCCGCAGGGAACACAAAGGCAAGAAGAAGACCCCAT...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTTGGGGGTTATTATGGGAGCCCCGTCACGCTGCTaGAAGCTGCCCAGAGATGGG +
Preference number: 4 (lower is better)
Translates to: QGISFWVTWGLYLGVIMGAPSRC*KLPRDG
Trigger: CCCATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGC...TCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTTGGCCCCGTCACGCTaGTGCAAGCTGCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGLAPSR*CKLPRD
Trigger: ATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAA...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGTCAAACAGGATCTCCTaGCACGCCGGGTCATTGGGA +
Preference number: 4 (lower is better)
Translates to: CYWESLSQGDSGLLGCQESNRIS*HAGSLG
Trigger: TCCCAATGACCCGGCGTGCCAGGAGATCCTGTTTGA...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTACTTGGGGCACCCACTaGCGCACAATGGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCTWGTH*RTMANS
Trigger: GCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGT...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GGAGCCTGGAATGCATATCCTGACTGCAGTCTCCTCCATACCAGGCACAAGGACACGTCTATCTTGTGCTaGACTTGGGGCACCCACTGG +
Preference number: 4 (lower is better)
Translates to: GAWNAYPDCSLLHTRHKDTSILC*TWGTHW
Trigger: CCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGT...GTCCTTGTGCCTGGTATGGAGGAGACTGCAGTCAGGATATGCATTCCAGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTCACGATCGTTCACATaGCAGCCTCGGCGCAGAATC +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGSRSFT*QPRRRI
Trigger: GATTCTGCGCCGAGGCTGCCATGTGAACGATCGTGA...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGAGAAGCGCGTTCATGTTaGTCCAGCGGCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: WCLETHGLGALKFSSFQGEARSC*SSGCAA
Trigger: CGCTGCGCAGCCGCTGGACCAACATGAACGCGCTTC...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCGAAGCGCGTTCATGTTaGTCCAGCGGCTGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLEARSC*SSGCAA
Trigger: CGCTGCGCAGCCGCTGGACCAACATGAACGCGCTTC...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGTCCTCAGCGCAGGGTTaGCGCCGTGCTCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQSSAQG*RRAPAN
Trigger: GTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGA...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCATGTCCATAGGATCTaGGACCACCTCCGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSHVHRI*DHLRRH
Trigger: GTGCCGGCGGAGGTGGTCCCAGATCCTATGGACATG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGCTGCCTTGGAGATCTTaGACACGGAGGCAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQLPWRS*TRRQRD
Trigger: GTCTCTTTGCCTCCGTGTCCAAGATCTCCAAGGCAG...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCTGCCTTGGAGATCTTaGACACGGAGGCAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVLPWRS*TRRQRD
Trigger: GTCTCTTTGCCTCCGTGTCCAAGATCTCCAAGGCAG...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCACGATCCCCTGCTTCTaGCCCGCGACAAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLTIPCF*PATRTW
Trigger: CCAGGTCCTTGTCGCGGGCCAGAAGCAGGGGATCGT...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGCATCATGCTTGCCTGTaGGCTGGTCCAGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: CYWESLSQGDSGLLGCQEHHACL*AGPAQC
Trigger: GCATTGAGCTGGACCAGCCCACAGGCAAGCATGATG...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGAGGTGTCTGGGAGCCTaGAATGCATATCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQRCLGA*NAYPDC
Trigger: GCAGTCAGGATATGCATTCCAGGCTCCCAGACACCT...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTTCGGGGATGGTGGTCTaGGGGTCAAACAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: RDGGFRIWGSLRAGALGISGMVV*GSNRIS
Trigger: GGAGATCCTGTTTGACCCTCAGACCACCATCCCCGA...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGAGGGCTGAGCCGTGGTTaGAGTCACTGCACGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WCLETHGLGALKFSSFQGGLSRG*SHCTWS
Trigger: ACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCC...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCCTAAGGGCTTCAGGGTaGCCATGGGGTCACGACATC +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSLRASG*PWGHDI
Trigger: GATGTCGTGACCCCATGGTCACCCTGAAGCCCTTAG...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTCCTGTGAATAGGGCTTaGGGTGTCTGGGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIPVNRA*GVWEPG
Trigger: TCCAGGCTCCCAGACACCTCAAGCCCTATTCACAGG...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp GGAGCCTGGAATGCATATCCTGACTGCAGTCTCCTCCATACCAGGCACAAGGACATGACGTCTATCTTGTaGTGGACTTGGGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: GAWNAYPDCSLLHTRHKDMTSIL*WTWGTH
Trigger: GTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCAT...GTCCTTGTGCCTGGTATGGAGGAGACTGCAGTCAGGATATGCATTCCAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTCAGGCGCAAGCCCAGTaGGCTAAGCATGAGATTGCC +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIQAQAQ*AKHEIA
Trigger: GGCAATCTCATGCTTAGCGCACTGGGCTTGCGCCTG...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCGCTGCCATCGTTCTTaGCCTCAGGTTCGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSRCHRS*PQVRPA
Trigger: AGCTGGACGAACCTGAGGGCAAGAACGATGGCAGCG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGGGGTCTTCTTCTTaGCTTTGTGTTCCCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CYWESLSQGDSGLLGCQEMGSSS*LCVPCG
Trigger: GCCGCAGGGAACACAAAGGCAAGAAGAAGACCCCAT...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCCACGCTGCTGCAAGCTaGCCAGAGATGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGHAAAS*PEMGMM
Trigger: CATCATCCCCATCTCTGGGCAGCTTGCAGCAGCGTG...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTAAGACAGAGCCATCATaGTTGCCTGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGKTEPS*LPVGWS
Trigger: GGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTT...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCAGACTGGGGAGACTGTaGGAGCAATGGGGTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSRLGRL*EQWGVG
Trigger: ACCGACACCCCATTGCTCCCACAGTCTCCCCAGTCT...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTGCAGGGCTGAGCCGTaGTTGAAGTCACTGCACGTG +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSCRAEP*LKSLHV
Trigger: CACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCA...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCCCCGGGGGAATCAGTaGATCCGCCAATCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGPRGNQ*IRQSSE
Trigger: TTCAGAGGATTGGCGGATCCACTGATTCCCCCGGGG...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCAGCGATGTGCAGGGCTaGGCCGTGGTTGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLSDVQG*AVVEVT
Trigger: AGTGACTTCAACCACGGCTCAGCCCTGCACATCGCT...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCGGAAATGGAGTTCTCTaGTGCAATGTCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSGNGVL*CNVLWG
Trigger: ACCCCAAAGGACATTGCATCAGAGAACTCCATTTCC...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp GGAGTCATGCTGAGTTTGGGGACATGCAGTGAAGGGGCAGTCGTGAGCTGTCCTGAATCTCTTTCTGGGTaGCATGGGGTCTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: GVMLSLGTCSEGAVVSCPESLSG*HGVCIW
Trigger: CCAAATACAGACCCCATGTCACCCAGAAAGAGATTC...AGGACAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAACTCAGCATGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTACTGGAATGCATATCCTaGCTGCAGTCTCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLLECIS*LQSPPY
Trigger: GTATGGAGGAGACTGCAGTCAGGATATGCATTCCAG...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGCACAGAACCGCAGTGTaGCCGTCTTCTGGCCATCCA +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQHRTAV*PSSGHP
Trigger: TGGATGGCCAGAAGACGGGCACACTGCGGTTCTGTG...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGGCTGGTCCAGCTCAATaGCATACCAGTAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGAGPAQ*HTSNLG
Trigger: CCCCAGGTTACTGGTATGGCATTGAGCTGGACCAGC...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGCAGAGCCATCATGCTTaGCTGTGGGCTGGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQQSHHA*LWAGPA
Trigger: AGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTG...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCAAGACAGAGCCATCATaGTTGCCTGTGGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGKTEPS*LPVGWS
Trigger: GGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTT...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCAATACGGGATGCTGGTaGGAAGACCCCATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLNTGCW*EDPMPR
Trigger: CCGAGGCATGGGGTCTTCGCACCAGCATCCCGTATT...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR GCA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCAATGCATATCCTGACTaGAGTCTCCTCCATACCAGG +
Preference number: 4 (lower is better)
Translates to: APRVSGDASGDSVSLSGVNAYPD*SLLHTR
Trigger: CCTGGTATGGAGGAGACTGCAGTCAGGATATGCATT...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTCTGAGTTTGGGGACATaGAGTGAAGGGGCAGTCGTG +
Preference number: 4 (lower is better)
Translates to: RDGGFRIWGSLRAGALGILSLGT*SEGAVV
Trigger: CACGACTGCCCCTTCACTGCATGTCCCCAAACTCAG...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCACAGCTCGGGGATGGTaGTCTGAGGGTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSTARGW*SEGQTG
Trigger: TCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGT...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTCAAACAGCTCGGGGATaGTGGTCTGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGQTARG*WSEGQT
Trigger: TGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTG...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTTCACGATCGTTCACATaGCAGCCTCGGCGCAGAATC +
Preference number: 4 (lower is better)
Translates to: RDGGFRIWGSLRAGALGISRSFT*QPRRRI
Trigger: GATTCTGCGCCGAGGCTGCCATGTGAACGATCGTGA...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCCATCATGCTTGCCTGTaGGCTGGTCCAGCTCAATGC +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSHHACL*AGPAQC
Trigger: GCATTGAGCTGGACCAGCCCACAGGCAAGCATGATG...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCTGAATACGGGATGCTaGTGCGAAGACCCCATGCCT +
Preference number: 4 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSLNTGC*CEDPMP
Trigger: AGGCATGGGGTCTTCGCACCAGCATCCCGTATTCAG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTTGGGGGTTATTATGGGAGATCCGCCAATCCTCTaGATACGGGATGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: QGISFWVTWGLYLGVIMGDPPIL*IRDAGA
Trigger: CGCACCAGCATCCCGTATTCAGAGGATTGGCGGATC...TCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGAGGCACAAGGACCTCATaGTTGGGTTTCCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: WCLETHGLGALKFSSFQGGTRTS*LGFLGT
Trigger: AGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCC...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGATGGACTCGGGGCATTaGAATTCTCCAGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGMDSGH*NSPVSR
Trigger: CCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCAT...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGAGCTGGTCCAGCTCAATaGCATACCAGTAACCTGGGG +
Preference number: 4 (lower is better)
Translates to: WCLETHGLGALKFSSFQGAGPAQ*HTSNLG
Trigger: CCCCAGGTTACTGGTATGGCATTGAGCTGGACCAGC...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTGACCAAAGTGGAGACTaGGGAGACTGTGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIDQSGD*GDCGSN
Trigger: ATTGCTCCCACAGTCTCCCCAGTCTCCACTTTGGTC...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTGCCATACCAGTAACCTaGGGCAAAGTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIAIPVT*GKVCLP
Trigger: GGGAAGACAGACTTTGCCCCAGGTTACTGGTATGGC...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGGCCATACCAGTAACCTaGGGCAAAGTCTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGAIPVT*GKVCLP
Trigger: GGGAAGACAGACTTTGCCCCAGGTTACTGGTATGGC...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGCAGAACAGCAACCTaGAAATGGAGTTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSSRTAT*KWSSLM
Trigger: CATCAGAGAACTCCATTTCCAGGTTGCTGTTCTGCT...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTACAGGGGTCTCTACTCTaGATGTGTTACTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLQGSLL*MCYWES
Trigger: AGATTCCCAGTAACACATCCAGAGTAGAGACCCCTG...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTAATTTTCTGGGAGTCTaGCCAGCACAGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQINFLGV*PAQELW
Trigger: CCACAGCTCCTGTGCTGGCCAGACTCCCAGAAAATT...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCCCCAGAGTCCTAGAATaGGGCCTCCAAATTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSPRVLE*GLQILG
Trigger: CCCCAAAATTTGGAGGCCCCATTCTAGGACTCTGGG...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGGTGTACTCTAGGGTTTaGGATCCCCAGAGTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGVYSRV*DPQSPR
Trigger: TCTAGGACTCTGGGGATCCCAAACCCTAGAGTACAC...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGCATGATTGGGTTTCCTaGGGACTTGGGATTGGATTT +
Preference number: 4 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQHDWVS*GLGIGF
Trigger: AAATCCAATCCCAAGTCCCCAGGAAACCCAATCATG...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCAAGGACCTCATGATTaGGTTTCCTGGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSQGPHD*VSWGLG
Trigger: CCCAAGTCCCCAGGAAACCCAATCATGAGGTCCTTG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTATGGGAATTCCTGTGTaGGGTTTCCTGGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIMGIPV*GFLVPV
Trigger: CACAGGCACCAGGAAACCCCACACAGGAATTCCCAT...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGATCCCCTCAGGGCCTTaGGGCCTTCCATTTATTAGA +
Preference number: 4 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQIPSGP*GLPFIR
Trigger: TCTAATAAATGGAAGGCCCCAAGGCCCTGAGGGGAT...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTGGAAATGGAGTTCTCTaGTGCAATGTCCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCGNGVL*CNVLWG
Trigger: ACCCCAAAGGACATTGCATCAGAGAACTCCATTTCC...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTGGATTTGGGATTCCATaGTTTGGGGGTCCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIGFGIP*FGGPRS
Trigger: ACTCCTAGGACCCCCAAATCATGGAATCCCAAATCC...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGAGTTTCCTGGTGCCTGTaGATAGGGCTTGAGGTGTCT +
Preference number: 4 (lower is better)
Translates to: WCLETHGLGALKFSSFQGVSWCL*IGLEVS
Trigger: AGACACCTCAAGCCCTATTCACAGGCACCAGGAAAC...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTTGGGGGTTATTATGGGAACAGCTCGGGGATGGTaGTCTGAGGGTCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: QGISFWVTWGLYLGVIMGTARGW*SEGQTG
Trigger: TCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGT...TCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCAAACAGCTCGGGGATaGTGGTCTGAGGGTCAAACA +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLQTARG*WSEGQT
Trigger: TGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTG...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTTCTTTCTGGGTGACATaGGGTCTGTATTTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCSFWVT*GLYLGV
Trigger: AACCCCCAAATACAGACCCCATGTCACCCAGAAAGA...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGGAATCTCATTGCCGATaGCGTCTATCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGESHCR*RLSCAG
Trigger: TCCAGCACAAGATAGACGTCATCGGCAATGAGATTC...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR TCA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGCACCATCATTTGGGGTaGTATGGAAATCTGTTAATC +
Preference number: 4 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQHHHLG*YGNLLI
Trigger: GATTAACAGATTTCCATATCACCCCAAATGATGGTG...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp GTGTTTGTTAATGGGGAGGTTTCTGATCCAGGGTTGGGTGATTCAAGAATGTTCAATACGGGATGCTGGTaGGAAGACCCCATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VFVNGEVSDPGLGDSRMFNTGCW*EDPMPR
Trigger: CCGAGGCATGGGGTCTTCGCACCAGCATCCCGTATT...GAACATTCTTGAATCACCCAACCCTGGATCAGAAACCTCCCCATTAACAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTAGCAGAACAGCAACCTaGAAATGGAGTTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCSRTAT*KWSSLM
Trigger: CATCAGAGAACTCCATTTCCAGGTTGCTGTTCTGCT...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGATCAATGATCGAGGGCTaGCTAACAGGGGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: WCLETHGLGALKFSSFQGSMIEG*LTGVST
Trigger: AGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGA...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGCATGGGGTCTGTATTTaGGGGTTATTATGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVHGVCI*GLLWEY
Trigger: ATACTCCCATAATAACCCCCAAATACAGACCCCATG...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGATTCCCTGGGGATTTaGGATTCCATGATTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQDSLGI*DSMIWG
Trigger: CCCCCAAATCATGGAATCCCAAATCCCCAGGGAATC...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCGAATCTCATTGCCGATaGCGTCTATCTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLESHCR*RLSCAG
Trigger: TCCAGCACAAGATAGACGTCATCGGCAATGAGATTC...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGCAGGGGTCTCTACTCTaGATGTGTTACTGGGAATCT +
Preference number: 4 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQQGSLL*MCYWES
Trigger: AGATTCCCAGTAACACATCCAGAGTAGAGACCCCTG...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CCA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCAGGGAATCTCTTTCTaGGTGACATGGGGTCTGTAT +
Preference number: 4 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLQGISF*VTWGLY
Trigger: ATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTTTCTGATCCAGGGTTaGGTGATTCAAGAATGTTCT +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGFLIQG*VIQECS
Trigger: AGAACATTCTTGAATCACCCAACCCTGGATCAGAAA...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGGTTACTCTTTTGCTTTaGGGGTGTGACCTATGTTTA +
Preference number: 4 (lower is better)
Translates to: LWMCYWESLSQGDSGLLGVTLLL*GCDLCL
Trigger: TAAACATAGGTCACACCCCCAAAGCAAAAGAGTAAC...CCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR GCA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTTGTCTGTTACTCTTTTaGTTTGGGGGTGTGACCTAT +
Preference number: 4 (lower is better)
Translates to: RDGGFRIWGSLRAGALGICLLLF*FGGVTY
Trigger: ATAGGTCACACCCCCAAAGCAAAAGAGTAACAGACA...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCTGGGGACTTGGGATTaGATTTTCAAATTTGGGATT +
Preference number: 4 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCLGTWD*IFKFGI
Trigger: AATCCCAAATTTGAAAATCCAATCCCAAGTCCCCAG...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR TCA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGTTTGCTTTGGGGGTGTaGCCTATGTTTATTTCAAGA +
Preference number: 4 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSFALGV*PMFISR
Trigger: TCTTGAAATAAACATAGGTCACACCCCCAAAGCAAA...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGTCATTTGGGGTGATATaGAAATCTGTTAATCTGGGA +
Preference number: 4 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGSFGVI*KSVNLG
Trigger: TCCCAGATTAACAGATTTCCATATCACCCCAAATGA...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CCA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCGGTTTCCTGGGGACTTaGGATTGGATTTTCAAATTT +
Preference number: 4 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGGFLGT*DWIFKF
Trigger: AAATTTGAAAATCCAATCCCAAGTCCCCAGGAAACC...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CAA 72 bp CCTATGTTTATTTCAAGAGGACTTAAGGGGCAGTGTTaGTTAATGGGGAGGTTTCTGATCCAGGGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PMFISRGLKGQC*LMGRFLIQGWV
Trigger: CACCCAACCCTGGATCAGAAACCTCCCCATTAACAAACACTGCCCCTTAAGTCCTCTTGAAATAAACATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CAA 72 bp CAGGGAATCTCTTTCTGGGTGACATGGGGTCTGTATTaGGGGGTTATTATGGGAGTATCTGTTAATAATGGG +
Preference number: 4 (lower is better)
Translates to: QGISFWVTWGLY*GVIMGVSVNNG
Trigger: CCCATTATTAACAGATACTCCCATAATAACCCCCAAATACAGACCCCATGTCACCCAGAAAGAGATTCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360535.9
3UTR CAA 72 bp GCAGTGTTTGTTAATGGGGAGGTTTCTGATCCAGGGTaGGGTGATTCAAGAATGTTCTGTTGTAATGCATTA +
Preference number: 4 (lower is better)
Translates to: AVFVNGEVSDPG*GDSRMFCCNAL
Trigger: TAATGCATTACAACAGAACATTCTTGAATCACCCAACCCTGGATCAGAAACCTCCCCATTAACAAACACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS GCA 90 bp CAGCGGCTGCGCAGCGTCACATCTGCGCCCAGCGCCAGCAGCTGCTaGGAGAGGCGCACGGCTGCCGCGGGGTCCCCGACTCCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: QRLRSVTSAPSASSC*ERRTAAAGSPTPWA
Trigger: GGCCCACGGAGTCGGGGACCCCGCGGCAGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCGCAGCCGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 90 bp GAGTTGGGGGCAGCCTTCAGGCAAATCCTGGAGGCAGAGGTCAGCTaGAGAGGGTGCCCGGCAGGCTCCAGGGTCCAAGCCCCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: ELGAAFRQILEAEVS*RGCPAGSRVQAPRS
Trigger: GCTCCTAGGGGCTTGGACCCTGGAGCCTGCCGGGCACCCTCTCCAGCTGACCTCTGCCTCCAGGATTTGCCTGAAGGCTGCCCCCAACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000592017.5
ENST00000593074.5
CDS CCA 90 bp CACCCCCACCCACCATGCAAACACACATCCCAGCCCCTGACCTTCTaGCCATCCAGCAGCACGCGGTCTCCCAGGCGCAAGCCCAGTGCG +
Preference number: 5 (lower is better)
Translates to: HPHPPCKHTSQPLTF*PSSSTRSPRRKPSA
Trigger: CGCACTGGGCTTGCGCCTGGGAGACCGCGTGCTGCTGGATGGCCAGAAGGTCAGGGGCTGGGATGTGTGTTTGCATGGTGGGTGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585466.1
CDS CCA 90 bp GCGCCCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCTGAGCCGTaGTTGAAGTCACTGCACGTGGAGTTCACCACTCGCGGCCTCGCA +
Preference number: 5 (lower is better)
Translates to: APRHRLEAAMCRAEP*LKSLHVEFTTRGLA
Trigger: TGCGAGGCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS TCA 90 bp CCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCTGAGCCGTGGTTaGAGTCACTGCACGTGGAGTTCACCACTCGCGGCCTCGCACCCT +
Preference number: 5 (lower is better)
Translates to: PGTGWKQRCAGLSRG*SHCTWSSPLAASHP
Trigger: AGGGTGCGAGGCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS TCA 90 bp TTTGGCGGCGCCCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCTaGGCCGTGGTTGAAGTCACTGCACGTGGAGTTCACCACTCGCGG +
Preference number: 5 (lower is better)
Translates to: FGGAQAQAGSSDVQG*AVVEVTARGVHHSR
Trigger: CCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS GCA 90 bp GCCGGCACCTGTCCTTTTCGATTCCTCAGCGCAGGGTTGGCGCCGTaGTCCAGCAAACATTTGGCGGCGCCCAGGCACAGGCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: AGTCPFRFLSAGLAP*SSKHLAAPRHRLEA
Trigger: TGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAAAGGACAGGTGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CCA 90 bp TTCGATTCCTCAGCGCAGGGTTGGCGCCGTGCTCCAGCAAACATTTaGCGGCGCCCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FDSSAQGWRRAPANI*RRPGTGWKQRCAGL
Trigger: CAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 90 bp CCTGCTTCTGGCCCGCGACAAGGACCTGGTCTCCAACCTCAGCCTTaGCCCCGTCACGCTGCTGCAAGCTGCCCAGAGATGGGGATGATG +
Preference number: 5 (lower is better)
Translates to: PASGPRQGPGLQPQP*PRHAAASCPEMGMM
Trigger: CATCATCCCCATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGGCCAGAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS TCA 90 bp GGCACCCACTGGCGCACAATGGCAAACAGCTCGGGGATGGTGGTCTaGGGGTCAAACAGGATCTCCTGGCACGCCGGGTCATTGGGATCG +
Preference number: 5 (lower is better)
Translates to: GTHWRTMANSSGMVV*GSNRISWHAGSLGS
Trigger: CGATCCCAATGACCCGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS GCA 90 bp TGGCACTGCCTCTTCCAGAAGCGTCCGCAGCTCCTTGGCCACCAGTaGCGCCTCTGCCTTGTCCAGGGACATGTCCATAGGATCTGGGAC +
Preference number: 5 (lower is better)
Translates to: WHCLFQKRPQLLGHQ*RLCLVQGHVHRIWD
Trigger: GTCCCAGATCCTATGGACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCTTCTGGAAGAGGCAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CCA 90 bp CTTGGGGCACCCACTGGCGCACAATGGCAAACAGCTCGGGGATGGTaGTCTGAGGGTCAAACAGGATCTCCTGGCACGCCGGGTCATTGG +
Preference number: 5 (lower is better)
Translates to: LGAPTGAQWQTARGW*SEGQTGSPGTPGHW
Trigger: CCAATGACCCGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CCA 90 bp GGACTTGGGGCACCCACTGGCGCACAATGGCAAACAGCTCGGGGATaGTGGTCTGAGGGTCAAACAGGATCTCCTGGCACGCCGGGTCAT +
Preference number: 5 (lower is better)
Translates to: GLGAPTGAQWQTARG*WSEGQTGSPGTPGH
Trigger: ATGACCCGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CCA 90 bp CACCAGTGCCGCCTCTGCCTTGTCCAGGGACATGTCCATAGGATCTaGGACCACCTCCGCCGGCACCTGTCCTTTTCGATTCCTCAGCGC +
Preference number: 5 (lower is better)
Translates to: HQCRLCLVQGHVHRI*DHLRRHLSFSIPQR
Trigger: GCGCTGAGGAATCGAAAAGGACAGGTGCCGGCGGAGGTGGTCCCAGATCCTATGGACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS-3UTR CAA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCAGCGTCCGCAGCTCCTaGGCCACCAGTGCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: APRVSGDASGDSVSLSGVSVRSS*ATSAAS
Trigger: AGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCT...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS GCA 90 bp AGCAAACATTTGGCGGCGCCCAGGCACAGGCTGGAAGCAGCGATGTaGAGGGCTGAGCCGTGGTTGAAGTCACTGCACGTGGAGTTCACC +
Preference number: 5 (lower is better)
Translates to: SKHLAAPRHRLEAAM*RAEPWLKSLHVEFT
Trigger: GGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGAGCGTCCGCAGCTCCTaGGCCACCAGTGCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVSVRSS*ATSAAS
Trigger: AGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCT...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCTCTCCAACCTCAGCCTaGGCCCCGTCACGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSSPTSA*APSRCC
Trigger: GCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGA...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 90 bp CAGCCTCGGCGCAGAATCTCATTGCCGATGACGTCTATCTTGTGCTaGACTTGGGGCACCCACTGGCGCACAATGGCAAACAGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: QPRRRISLPMTSILC*TWGTHWRTMANSSG
Trigger: CCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS-3UTR CAA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGTTCCTCAGCGCAGGGTaGGCGCCGTGCTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQFLSAG*APCSSK
Trigger: TTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAA...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCCGCGCAACTGGATCTaGGGCAACCATAGGGACCCC +
Preference number: 5 (lower is better)
Translates to: APRVSGDASGDSVSLSGVPRNWI*GNHRDP
Trigger: GGGGTCCCTATGGTTGCCCAAGATCCAGTTGCGCGG...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS GCA 90 bp TGGCAGCCTCGGCGCAGAATCTCATTGCCGATGACGTCTATCTTGTaGTGGACTTGGGGCACCCACTGGCGCACAATGGCAAACAGCTCG +
Preference number: 5 (lower is better)
Translates to: WQPRRRISLPMTSIL*WTWGTHWRTMANSS
Trigger: CGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCGAGGCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CCA 90 bp CGGCGCAGAATCTCATTGCCGATGACGTCTATCTTGTGCTGGACTTaGGGCACCCACTGGCGCACAATGGCAAACAGCTCGGGGATGGTG +
Preference number: 5 (lower is better)
Translates to: RRRISLPMTSILCWT*GTHWRTMANSSGMV
Trigger: CACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS-3UTR CAA 90 bp TGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTATGCTCCAGCAAACATTaGGCGGCGCCCAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: WESLSQGDSGLLGCQEMLCSSKH*AAPRHR
Trigger: CCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCA...TAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGACGCTGCCATCGTTCTaGCCCTCAGGTTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQTLPSF*PSGSSS
Trigger: GCTGGACGAACCTGAGGGCAAGAACGATGGCAGCGT...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCAGACGCTGCCATCGTTCTaGCCCTCAGGTTCGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PRVSGDASGDSVSLSGVQTLPSF*PSGSSS
Trigger: GCTGGACGAACCTGAGGGCAAGAACGATGGCAGCGT...CTGGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGTCTCCAACCTCAGCCTaGGCCCCGTCACGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQSPTSA*APSRCC
Trigger: GCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGA...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCACAGAGCCATCATGCTaGCCTGTGGGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSTEPSC*PVGWSS
Trigger: GCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGT...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGAGTCGTGAGCTGTCCTaGGTGGTCGGGGCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQSRELS*VVGAPG
Trigger: ACCTGGGGCCCCGACCACCAAGGACAGCTCACGACT...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGAGGGGCGGGTGCAGAGTaGGGGGCAGCCTTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: WCLETHGLGALKFSSFQGGAGAE*GAAFRQ
Trigger: TTGCCTGAAGGCTGCCCCCAACTCTGCACCCGCCCC...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCGGGGCGGGTGCAGAGTaGGGGGCAGCCTTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLGAGAE*GAAFRQ
Trigger: TTGCCTGAAGGCTGCCCCCAACTCTGCACCCGCCCC...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGGGGGACTCTGTCTCTTaGTCAGGTGTCCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: CYWESLSQGDSGLLGCQEGDSVS*SGVQGL
Trigger: GAGGCCCTGGACACCTGACAAAGAGACAGAGTCCCC...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CAGTCTCCTCCATACCAGGCACAAGGACCTCATGATTGGGTTTCCTGGGGACTTAGGGCTGAGCCGTGGTaGAAGTCACTGCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: QSPPYQAQGPHDWVSWGLRAEPW*KSLHVE
Trigger: CTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCT...AAGTCCCCAGGAAACCCAATCATGAGGTCCTTGTGCCTGGTATGGAGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGAGGGCTGAGCCGTGGTaGAAGTCACTGCACGTGGAG +
Preference number: 5 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQRAEPW*KSLHVE
Trigger: CTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCT...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGTTCCTCAGCGCAGGGTaGGCGCCGTGCTCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSFLSAG*APCSSK
Trigger: TTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAA...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTTGTTCCCTGCGGCCTTaGCCGGTGACACGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQICSLRP*PVTREK
Trigger: CTTCTCCCGTGTCACCGGCAAAGGCCGCAGGGAACA...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGTGTTCCCTGCGGCCTTaGCCGGTGACACGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGCSLRP*PVTREK
Trigger: CTTCTCCCGTGTCACCGGCAAAGGCCGCAGGGAACA...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCGATGGGGTCTTCTTCTaGCCTTTGTGTTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: LLGCQEMLVGTLSLCQVSDGVFF*PLCSLR
Trigger: CCGCAGGGAACACAAAGGCAAGAAGAAGACCCCATC...GGACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGGTGAAGGTGCGTTaGGGCTGCGTCATTGTCACT +
Preference number: 5 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQVVKVR*GCVIVT
Trigger: AGTGACAATGACGCAGCCCAAACGCACCTTCACCAC...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGTCGGGGTTCCAGGATTaGAGATCCCCTCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVSGFQD*RSPQGL
Trigger: AAGGCCCTGAGGGGATCTCAAATCCTGGAACCCCGA...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGTGGCACGCCGGGTCATaGGGATCGAAGAAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: CYWESLSQGDSGLLGCQEWHAGS*GSKKVK
Trigger: TTTCACCTTCTTCGATCCCAATGACCCGGCGTGCCA...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGTATCTTGTGCTGGACTaGGGGCACCCACTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSYLVLD*GHPLAH
Trigger: GTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATA...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGCCGATGACGTCTATCTaGTGCTGGACTTGGGGCACC +
Preference number: 5 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQPMTSI*CWTWGT
Trigger: GGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGG...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGCGGCGCAGAATCTCATaGCCGATGACGTCTATCTTG +
Preference number: 5 (lower is better)
Translates to: SGLLGCQEMLVGTLSLCQRRRIS*PMTSIL
Trigger: CAAGATAGACGTCATCGGCAATGAGATTCTGCGCCG...CTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TGGTGTCTTGAAACCCATGGACTCGGGGCATTGAAATTCTCCAGTTTCCAGGGATGCTCCAGCAAACATTaGGCGGCGCCCAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: WCLETHGLGALKFSSFQGCSSKH*AAPRHR
Trigger: CCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCA...TCCCTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATGGGTTTCAAGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTAGTGCCGCCTCTGCCTaGTCCAGGGACATGTCCATA +
Preference number: 5 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGSAASA*SRDMSI
Trigger: TATGGACATGTCCCTGGACAAGGCAGAGGCGGCACT...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCGGTGCGTCCACTGCCTaGGAGATCTTGGACACGGAG +
Preference number: 5 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSGASTA*EILDTE
Trigger: CTCCGTGTCCAAGATCTCCAAGGCAGTGGACGCACC...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGGATGGGGTCTTCTTCTaGCCTTTGTGTTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: CYWESLSQGDSGLLGCQEDGVFF*PLCSLR
Trigger: CCGCAGGGAACACAAAGGCAAGAAGAAGACCCCATC...CTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTGGGGACTCTGTCTCTTaGTCAGGTGTCCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQIGDSVS*SGVQGL
Trigger: GAGGCCCTGGACACCTGACAAAGAGACAGAGTCCCC...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp CTCAATGATCGAGGGCTGGCTAACAGGGGTCTCTACTCTGGATGTGTTACTGGGAGGGCACAGGGGAGTTaGGGACGTGTGTACTCTAGG +
Preference number: 5 (lower is better)
Translates to: LNDRGLANRGLYSGCVTGRAQGS*GRVYSR
Trigger: CCTAGAGTACACACGTCCCAAACTCCCCTGTGCCCT...CCCAGTAACACATCCAGAGTAGAGACCCCTGTTAGCCAGCCCTCGATCATTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGTTCTCCCTCGAGCTGTaGGTCTGGCCCAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGFSLEL*VWPRCC
Trigger: ACAGCACCTGGGCCAGACCAACAGCTCGAGGGAGAA...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCGGAGTCATGCTGAGTTaGGGGACATGCAGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: GCVTGNLYLRVTQGSSGVGVMLS*GTCSEG
Trigger: CCCTTCACTGCATGTCCCCAAACTCAGCATGACTCC...GACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCCCGATGACGTCTATCTaGTGCTGGACTTGGGGCACC +
Preference number: 5 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSPMTSI*CWTWGT
Trigger: GGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGG...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCAGTGCCGCCTCTGCCTaGTCCAGGGACATGTCCATA +
Preference number: 5 (lower is better)
Translates to: LYSGCVTGNLYLRVTQGSSAASA*SRDMSI
Trigger: TATGGACATGTCCCTGGACAAGGCAGAGGCGGCACT...GGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGTTGGGTAGCGTGACCTaGGGGAGGGCGCAAGATAGT +
Preference number: 5 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSLGSVT*GRAQDS
Trigger: ACTATCTTGCGCCCTCCCCAAGGTCACGCTACCCAA...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCGTCTTCTTCTTGCCTTaGTGTTCCCTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GCVTGNLYLRVTQGSSGVVFFLP*CSLRPL
Trigger: CAAAGGCCGCAGGGAACACAAAGGCAAGAAGAAGAC...GACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp AGGGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGACAGAGCCATCATGCTaGCCTGTGGGCTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RGLYSGCVTGNLYLRVTQTEPSC*PVGWSS
Trigger: GCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGT...CTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTGGTGAAGGTGCGTTaGGGCTGCGTCATTGTCACT +
Preference number: 5 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGVVKVR*GCVIVT
Trigger: AGTGACAATGACGCAGCCCAAACGCACCTTCACCAC...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GGAGCCTGGAATGCATATCCTGACTGCAGTCTCCTCCATACCAGGCACAAGGACGGATTCCCTGGGGATTaGGGATTCCATGATTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAWNAYPDCSLLHTRHKDGFPGD*GFHDLG
Trigger: CCCCAAATCATGGAATCCCAAATCCCCAGGGAATCC...GTCCTTGTGCCTGGTATGGAGGAGACTGCAGTCAGGATATGCATTCCAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCTTGGAATTTGGTGTCTaGAAACCCATGGACTCGGGG +
Preference number: 5 (lower is better)
Translates to: APRVSGDASGDSVSLSGVLEFGV*KPMDSG
Trigger: CCCCGAGTCCATGGGTTTCAAGACACCAAATTCCAA...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTGGCACGCCGGGTCATaGGGATCGAAGAAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: GLYSGCVTGNLYLRVTQGWHAGS*GSKKVK
Trigger: TTTCACCTTCTTCGATCCCAATGACCCGGCGTGCCA...GCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCTTCTTCTTGCCTTaGTGTTCCCTGCGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGVFFLP*CSLRPL
Trigger: CAAAGGCCGCAGGGAACACAAAGGCAAGAAGAAGAC...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCATCTGCTCTGAGGGGTaGGGGATAGGGACTAGCCTG +
Preference number: 5 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLICSEG*GIGTSL
Trigger: CAGGCTAGTCCCTATCCCCAACCCCTCAGAGCAGAT...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GGGTCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTAGGAGTTACGGCATaGGGGTCTTCTAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GSLLWMCYWESLSQGDSGLGVTA*GSSRGC
Trigger: ACAGCCCCTAGAAGACCCCAATGCCGTAACTCCTAG...CCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp AGAGATGGAGGCTTTAGGATTTGGGGTTCCCTTAGGGCTGGGGCTCTTGGAATTACTGCCTTGGAGATCTaGGACACGGAGGCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: RDGGFRIWGSLRAGALGITALEI*DTEAKR
Trigger: TCTCTTTGCCTCCGTGTCCAAGATCTCCAAGGCAGT...AATTCCAAGAGCCCCAGCCCTAAGGGAACCCCAAATCCTAAAGCCTCCATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGACTGCCTTGGAGATCTaGGACACGGAGGCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSTALEI*DTEAKR
Trigger: TCTCTTTGCCTCCGTGTCCAAGATCTCCAAGGCAGT...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp CTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAACATGGGGTCTGTATTaGGGGGTTATTATGGGAGTA +
Preference number: 5 (lower is better)
Translates to: LRAPRVSGDASGDSVSLSTWGLY*GVIMGV
Trigger: TACTCCCATAATAACCCCCAAATACAGACCCCATGT...TGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGCCCTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCGTTTCTGATCCAGGGTaGGGTGATTCAAGAATGTTC +
Preference number: 5 (lower is better)
Translates to: APRVSGDASGDSVSLSGVVSDPG*GDSRMF
Trigger: GAACATTCTTGAATCACCCAACCCTGGATCAGAAAC...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTTCTCTGATTGAGGGGTaGGAATCTAAGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGSLIEG*ESKGFR
Trigger: CCTGAAGCCCTTAGATTCCAACCCCTCAATCAGAGA...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCCCTGGGGACTTGGGATaGGATTTTCAAATTTGGGAT +
Preference number: 5 (lower is better)
Translates to: APRVSGDASGDSVSLSGVPGDLG*DFQIWD
Trigger: ATCCCAAATTTGAAAATCCAATCCCAAGTCCCCAGG...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TCTCTACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCGGCGCAGAATCTCATaGCCGATGACGTCTATCTTG +
Preference number: 5 (lower is better)
Translates to: SLLWMCYWESLSQGDSGLRRRIS*PMTSIL
Trigger: CAAGATAGACGTCATCGGCAATGAGATTCTGCGCCG...GAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp GTGTTTGTTAATGGGGAGGTTTCTGATCCAGGGTTGGGTGATTCAAGAATGTTCGGTGCGTCCACTGCCTaGGAGATCTTGGACACGGAG +
Preference number: 5 (lower is better)
Translates to: VFVNGEVSDPGLGDSRMFGASTA*EILDTE
Trigger: CTCCGTGTCCAAGATCTCCAAGGCAGTGGACGCACC...GAACATTCTTGAATCACCCAACCCTGGATCAGAAACCTCCCCATTAACAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGGAGATGCTAGTGATGTCTGTTACTCTTTaGCTTTGGGGGTGTGACCTA +
Preference number: 5 (lower is better)
Translates to: ESLSQGDSGLLGCQEMLVMSVTL*LWGCDL
Trigger: TAGGTCACACCCCCAAAGCAAAAGAGTAACAGACAT...CACTAGCATCTCCTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GTGTGTACTCTAGGGTTTGGGATCCCCAGAGTCCTAGAATGGGGCCTCCAAATTTTGGGATTCCATGATTaGGGGGTCCTAGGAGTTACG +
Preference number: 5 (lower is better)
Translates to: VCTLGFGIPRVLEWGLQILGFHD*GVLGVT
Trigger: CGTAACTCCTAGGACCCCCAAATCATGGAATCCCAA...AATTTGGAGGCCCCATTCTAGGACTCTGGGGATCCCAAACCCTAGAGTACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCATGGACTCGGGGCATaGAAATTCTCCAGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSHGLGA*KFSSFQ
Trigger: CTGGAAACTGGAGAATTTCAATGCCCCGAGTCCATG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp TGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTGTTTGGGCTGCGTCATaGTCACTTGATGCACTTTTT +
Preference number: 5 (lower is better)
Translates to: WMCYWESLSQGDSGLLGCVWAAS*SLDALF
Trigger: AAAAAGTGCATCAAGTGACAATGACGCAGCCCAAAC...ACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTTTGGGCTGCGTCATaGTCACTTGATGCACTTTTT +
Preference number: 5 (lower is better)
Translates to: SGCVTGNLYLRVTQGSSGVWAAS*SLDALF
Trigger: AAAAAGTGCATCAAGTGACAATGACGCAGCCCAAAC...ACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp TACTCTGGATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGCTTAAGGGGCAGTGTTaGTTAATGGGGAGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: YSGCVTGNLYLRVTQGSSLKGQC*LMGRFL
Trigger: CAGAAACCTCCCCATTAACAAACACTGCCCCTTAAG...CGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACATCCAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS-3UTR CAA 90 bp GCTCCTCGGGTGTCAGGAGATGCTAGTGGGGACTCTGTCTCTTTGTCAGGTGTCATTGGATTTTCAAATTaGGGATTCCCTGGGGATTTG +
Preference number: 5 (lower is better)
Translates to: APRVSGDASGDSVSLSGVIGFSN*GFPGDL
Trigger: CAAATCCCCAGGGAATCCCAAATTTGAAAATCCAAT...GACACCTGACAAAGAGACAGAGTCCCCACTAGCATCTCCTGACACCCGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS TCA 90 bp AAATGGAGTTCTCTGATGCAATGTCCTTTGGGGTCCGGACTGTGGTaGAGGTGCGTTTGGGCTGCGTCATTGTCACTTGATGCACTTTTT +
Preference number: 5 (lower is better)
Translates to: KWSSLMQCPLGSGLW*RCVWAASLSLDALF
Trigger: AAAAAGTGCATCAAGTGACAATGACGCAGCCCAAACGCACCTTCACCACAGTCCGGACCCCAAAGGACATTGCATCAGAGAACTCCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS-3UTR CAA 90 bp ATGTGTTACTGGGAATCTCTATCTCAGGGTGACTCAGGGCTCCTCGGGTGTCAGATAGAAACGTCTTTATaGAAGAGGACAGGAGTCATG +
Preference number: 5 (lower is better)
Translates to: MCYWESLSQGDSGLLGCQIETSL*KRTGVM
Trigger: CATGACTCCTGTCCTCTTCAATAAAGACGTTTCTAT...CTGACACCCGAGGAGCCCTGAGTCACCCTGAGATAGAGATTCCCAGTAACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360535.9
CDS GCA 72 bp CGCAGCGTCACATCTGCGCCCAGCGCCAGCAGCTGCTaGGAGAGGCGCACGGCTGCCGCGGGGTCCCCGACT +
Preference number: 6 (lower is better)
Translates to: RSVTSAPSASSC*ERRTAAAGSPT
Trigger: AGTCGGGGACCCCGCGGCAGCCGTGCGCCTCTCGCAGCAGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 72 bp AGGGTCCAAGCCCCTAGGAGCTTCCAGGGCCCCGGGTaGCCTCCGCGCAACTGGATCTCGGGCAGACAGCGC +
Preference number: 6 (lower is better)
Translates to: RVQAPRSFQGPG*PPRNWISGRQR
Trigger: GCGCTGTCTGCCCGAGATCCAGTTGCGCGGAGGCCACCCGGGGCCCTGGAAGCTCCTAGGGGCTTGGACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592017.5
CDS GCA 72 bp CCGCGTAGTGAAGCGCGTTCATGTTGGTCCAGCGGCTaGGCAGCGTCACATCTGCGCCCAGCGCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: PRSEARSCWSSG*AASHLRPAPAA
Trigger: AGCTGCTGGCGCTGGGCGCAGATGTGACGCTGCGCAGCCGCTGGACCAACATGAACGCGCTTCACTACGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 72 bp GGCCCGCGACAAGGACCTGGTCTCCAACCTCAGCCTTaGCCCCGTCACGCTGCTGCAAGCTGCCCAGAGATG +
Preference number: 6 (lower is better)
Translates to: GPRQGPGLQPQP*PRHAAASCPEM
Trigger: CATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 72 bp TCCAGGGCCCCGGGTGGCCTCCGCGCAACTGGATCTTaGGCAACCATAGGGACCCCCGTTACCCATAGAGGG +
Preference number: 6 (lower is better)
Translates to: SRAPGGLRATGS*ATIGTPVTHRG
Trigger: CCCTCTATGGGTAACGGGGGTCCCTATGGTTGCCCAAGATCCAGTTGCGCGGAGGCCACCCGGGGCCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS CCA 72 bp AGGAGCTTCCAGGGCCCCGGGTGGCCTCCGCGCAACTaGATCTTGGGCAACCATAGGGACCCCCGTTACCCA +
Preference number: 6 (lower is better)
Translates to: RSFQGPGWPPRN*ILGNHRDPRYP
Trigger: TGGGTAACGGGGGTCCCTATGGTTGCCCAAGATCCAGTTGCGCGGAGGCCACCCGGGGCCCTGGAAGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS CCA 72 bp AGGGTCCAAGCCCCTAGGAGCTTCCAGGGCCCCGGGTaGCCTCCGCGCAACTGGATCTTGGGCAACCATAGG +
Preference number: 6 (lower is better)
Translates to: RVQAPRSFQGPG*PPRNWILGNHR
Trigger: CCTATGGTTGCCCAAGATCCAGTTGCGCGGAGGCCACCCGGGGCCCTGGAAGCTCCTAGGGGCTTGGACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593074.5
CDS CAA 72 bp CTCAGCGCAGGGTTGGCGCCGTGCTCCAGCAAACATTaGGCGGCGCCCAGGCACAGGCTGGAAGCAGCGATG +
Preference number: 6 (lower is better)
Translates to: LSAGLAPCSSKH*AAPRHRLEAAM
Trigger: CATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CAA 90 bp CCCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCTGAGCCGTGGTaGAAGTCACTGCACGTGGAGTTCACCACTCGCGGCCTCGCACCC +
Preference number: 6 (lower is better)
Translates to: PRHRLEAAMCRAEPW*KSLHVEFTTRGLAP
Trigger: GGGTGCGAGGCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 90 bp GGAGGGCAGATGAAGTACCGAACGCCCCCAACGCTGCCATCGTTCTaGCCCTCAGGTTCGTCCAGCTCCACGCCCACCCACTGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GGQMKYRTPPTLPSF*PSGSSSSTPTHWPL
Trigger: CAGCGGCCAGTGGGTGGGCGTGGAGCTGGACGAACCTGAGGGCAAGAACGATGGCAGCGTTGGGGGCGTTCGGTACTTCATCTGCCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 72 bp GCCGGCACCTGTCCTTTTCGATTCCTCAGCGCAGGGTaGGCGCCGTGCTCCAGCAAACATTTGGCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: AGTCPFRFLSAG*APCSSKHLAAP
Trigger: GGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAAAGGACAGGTGCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CAA 72 bp TGGCCCGCGACAAGGACCTGGTCTCCAACCTCAGCCTaGGCCCCGTCACGCTGCTGCAAGCTGCCCAGAGAT +
Preference number: 6 (lower is better)
Translates to: WPATRTWSPTSA*APSRCCKLPRD
Trigger: ATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 90 bp CCCTGCTTCTGGCCCGCGACAAGGACCTGGTCTCCAACCTCAGCCTaGGCCCCGTCACGCTGCTGCAAGCTGCCCAGAGATGGGGATGAT +
Preference number: 6 (lower is better)
Translates to: PCFWPATRTWSPTSA*APSRCCKLPRDGDD
Trigger: ATCATCCCCATCTCTGGGCAGCTTGCAGCAGCGTGACGGGGCCAAGGCTGAGGTTGGAGACCAGGTCCTTGTCGCGGGCCAGAAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS TCA 72 bp GGCTGGAAGCAGCGATGTGCAGGGCTGAGCCGTGGTTaGAGTCACTGCACGTGGAGTTCACCACTCGCGGCC +
Preference number: 6 (lower is better)
Translates to: GWKQRCAGLSRG*SHCTWSSPLAA
Trigger: GGCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 72 bp CCGGCACCTGTCCTTTTCGATTCCTCAGCGCAGGGTTaGCGCCGTGCTCCAGCAAACATTTGGCGGCGCCCA +
Preference number: 6 (lower is better)
Translates to: PAPVLFDSSAQG*RRAPANIWRRP
Trigger: TGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAAAGGACAGGTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CCA 72 bp CCACCATGCAAACACACATCCCAGCCCCTGACCTTCTaGCCATCCAGCAGCACGCGGTCTCCCAGGCGCAAG +
Preference number: 6 (lower is better)
Translates to: PPCKHTSQPLTF*PSSSTRSPRRK
Trigger: CTTGCGCCTGGGAGACCGCGTGCTGCTGGATGGCCAGAAGGTCAGGGGCTGGGATGTGTGTTTGCATGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585466.1
CDS CAA 90 bp TTTCGATTCCTCAGCGCAGGGTTGGCGCCGTGCTCCAGCAAACATTaGGCGGCGCCCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: FRFLSAGLAPCSSKH*AAPRHRLEAAMCRA
Trigger: AGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS TCA 72 bp GCCCAGGCACAGGCTGGAAGCAGCGATGTGCAGGGCTaGGCCGTGGTTGAAGTCACTGCACGTGGAGTTCAC +
Preference number: 6 (lower is better)
Translates to: AQAQAGSSDVQG*AVVEVTARGVH
Trigger: GTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCTGTGCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS GCA 72 bp TGTCCTTTTCGATTCCTCAGCGCAGGGTTGGCGCCGTaGTCCAGCAAACATTTGGCGGCGCCCAGGCACAGG +
Preference number: 6 (lower is better)
Translates to: CPFRFLSAGLAP*SSKHLAAPRHR
Trigger: CCTGTGCCTGGGCGCCGCCAAATGTTTGCTGGAGCACGGCGCCAACCCTGCGCTGAGGAATCGAAAAGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS GCA 72 bp CTCTTCCAGAAGCGTCCGCAGCTCCTTGGCCACCAGTaGCGCCTCTGCCTTGTCCAGGGACATGTCCATAGG +
Preference number: 6 (lower is better)
Translates to: LFQKRPQLLGHQ*RLCLVQGHVHR
Trigger: CCTATGGACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCTTCTGGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CCA 72 bp CCCACTGGCGCACAATGGCAAACAGCTCGGGGATGGTaGTCTGAGGGTCAAACAGGATCTCCTGGCACGCCG +
Preference number: 6 (lower is better)
Translates to: PTGAQWQTARGW*SEGQTGSPGTP
Trigger: CGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CAA 72 bp AGGCTGGAAGCAGCGATGTGCAGGGCTGAGCCGTGGTaGAAGTCACTGCACGTGGAGTTCACCACTCGCGGC +
Preference number: 6 (lower is better)
Translates to: RLEAAMCRAEPW*KSLHVEFTTRG
Trigger: GCCGCGAGTGGTGAACTCCACGTGCAGTGACTTCAACCACGGCTCAGCCCTGCACATCGCTGCTTCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 72 bp ATGAAGTACCGAACGCCCCCAACGCTGCCATCGTTCTaGCCCTCAGGTTCGTCCAGCTCCACGCCCACCCAC +
Preference number: 6 (lower is better)
Translates to: MKYRTPPTLPSF*PSGSSSSTPTH
Trigger: GTGGGTGGGCGTGGAGCTGGACGAACCTGAGGGCAAGAACGATGGCAGCGTTGGGGGCGTTCGGTACTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 90 bp GCGCAAGATAGTGGCACTGCCTCTTCCAGAAGCGTCCGCAGCTCCTaGGCCACCAGTGCCGCCTCTGCCTTGTCCAGGGACATGTCCATA +
Preference number: 6 (lower is better)
Translates to: AQDSGTASSRSVRSS*ATSAASALSRDMSI
Trigger: TATGGACATGTCCCTGGACAAGGCAGAGGCGGCACTGGTGGCCAAGGAGCTGCGGACGCTTCTGGAAGAGGCAGTGCCACTATCTTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS TCA 72 bp TGGCGCACAATGGCAAACAGCTCGGGGATGGTGGTCTaGGGGTCAAACAGGATCTCCTGGCACGCCGGGTCA +
Preference number: 6 (lower is better)
Translates to: WRTMANSSGMVV*GSNRISWHAGS
Trigger: TGACCCGGCGTGCCAGGAGATCCTGTTTGACCCTCAGACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS GCA 72 bp ATCCAGCAGCACGCGGTCTCCCAGGCGCAAGCCCAGTaGGCTAAGCATGAGATTGCCTGGGACGTTGTCATA +
Preference number: 6 (lower is better)
Translates to: IQQHAVSQAQAQ*AKHEIAWDVVI
Trigger: TATGACAACGTCCCAGGCAATCTCATGCTTAGCGCACTGGGCTTGCGCCTGGGAGACCGCGTGCTGCTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360535.9
ENST00000585466.1
ENST00000593074.5
CDS CCA 72 bp CATCAAAATAGGCCGCGTAGTGAAGCGCGTTCATGTTaGTCCAGCGGCTGCGCAGCGTCACATCTGCGCCCA +
Preference number: 6 (lower is better)
Translates to: HQNRPRSEARSC*SSGCAASHLRP
Trigger: TGGGCGCAGATGTGACGCTGCGCAGCCGCTGGACCAACATGAACGCGCTTCACTACGCGGCCTATTTTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 90 bp TCGGCGCAGAATCTCATTGCCGATGACGTCTATCTTGTGCTGGACTaGGGGCACCCACTGGCGCACAATGGCAAACAGCTCGGGGATGGT +
Preference number: 6 (lower is better)
Translates to: SAQNLIADDVYLVLD*GHPLAHNGKQLGDG
Trigger: ACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS GCA 72 bp CGGCGCAGAATCTCATTGCCGATGACGTCTATCTTGTaGTGGACTTGGGGCACCCACTGGCGCACAATGGCA +
Preference number: 6 (lower is better)
Translates to: RRRISLPMTSIL*WTWGTHWRTMA
Trigger: TGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CCA 72 bp ATGACGTCTATCTTGTGCTGGACTTGGGGCACCCACTaGCGCACAATGGCAAACAGCTCGGGGATGGTGGTC +
Preference number: 6 (lower is better)
Translates to: MTSILCWTWGTH*RTMANSSGMVV
Trigger: GACCACCATCCCCGAGCTGTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CCA 72 bp AGTGTCATGTCGGTCAGCCCGTCACGATCGTTCACATaGCAGCCTCGGCGCAGAATCTCATTGCCGATGACG +
Preference number: 6 (lower is better)
Translates to: SVMSVSPSRSFT*QPRRRISLPMT
Trigger: CGTCATCGGCAATGAGATTCTGCGCCGAGGCTGCCATGTGAACGATCGTGACGGGCTGACCGACATGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CAA 72 bp CCTCGGCGCAGAATCTCATTGCCGATGACGTCTATCTaGTGCTGGACTTGGGGCACCCACTGGCGCACAATG +
Preference number: 6 (lower is better)
Translates to: PRRRISLPMTSI*CWTWGTHWRTM
Trigger: CATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS CCA 72 bp ACCGGACACCGAAGACAGAGCCATCATGCTTGCCTGTaGGCTGGTCCAGCTCAATGCCATACCAGTAACCTG +
Preference number: 6 (lower is better)
Translates to: TGHRRQSHHACL*AGPAQCHTSNL
Trigger: CAGGTTACTGGTATGGCATTGAGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTTCGGTGTCCGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CAA 72 bp GTGAAGTACCGGACACCGAAGACAGAGCCATCATGCTaGCCTGTGGGCTGGTCCAGCTCAATGCCATACCAG +
Preference number: 6 (lower is better)
Translates to: VKYRTPKTEPSC*PVGWSSSMPYQ
Trigger: CTGGTATGGCATTGAGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTTCGGTGTCCGGTACTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS GCA 72 bp CAAGTGAAGTACCGGACACCGAAGACAGAGCCATCATaGTTGCCTGTGGGCTGGTCCAGCTCAATGCCATAC +
Preference number: 6 (lower is better)
Translates to: QVKYRTPKTEPS*LPVGWSSSMPY
Trigger: GTATGGCATTGAGCTGGACCAGCCCACAGGCAAGCATGATGGCTCTGTCTTCGGTGTCCGGTACTTCACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5
CDS CCA 72 bp CGCAGAATCTCATTGCCGATGACGTCTATCTTGTGCTaGACTTGGGGCACCCACTGGCGCACAATGGCAAAC +
Preference number: 6 (lower is better)
Translates to: RRISLPMTSILC*TWGTHWRTMAN
Trigger: GTTTGCCATTGTGCGCCAGTGGGTGCCCCAAGTCCAGCACAAGATAGACGTCATCGGCAATGAGATTCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360535.9
ENST00000590559.2
ENST00000592017.5
ENST00000593074.5
CDS TCA 72 bp TCTCTGATGCAATGTCCTTTGGGGTCCGGACTGTGGTaGAGGTGCGTTTGGGCTGCGTCATTGTCACTTGAT +
Preference number: 6 (lower is better)
Translates to: SLMQCPLGSGLW*RCVWAASLSLD
Trigger: ATCAAGTGACAATGACGCAGCCCAAACGCACCTTCACCACAGTCCGGACCCCAAAGGACATTGCATCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360535.9
ENST00000593074.5