RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLIC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000159212

Ensembl transcript IDs: ENST00000349499.3, ENST00000360731.7

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGGGCAGAGAAGTATTGCTATCCCCACACGATACCACCAGCACTaGGGGACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAG +
Preference number: 1 (lower is better)
Translates to: EGQRSIAIPTRYHQH*GTAALGLRESRPEK
Trigger: CTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCGTGTGGGGATAGCAATACTTCTCTGCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 90 bp GCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTGCCTTTCCTaGAAGCAGAGGCAGTGGCATCCTGGAGGCAGAAATGAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: AGTRDTDKHPPPCLS*KQRQWHPGGRNEAE
Trigger: CTCTGCCTCATTTCTGCCTCCAGGATGCCACTGCCTCTGCTTCCAGGAAAGGCAAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 90 bp TTGCTATCCCCACACGATACCACCAGCACTGAGGGACTGCAGCCTTaGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTT +
Preference number: 1 (lower is better)
Translates to: LLSPHDTTSTEGLQP*VSERAARRRNQSVL
Trigger: AAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCGTGTGGGGATAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR GCA 90 bp GAGAAGTATTGCTATCCCCACACGATACCACCAGCACTGAGGGACTaGAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAA +
Preference number: 1 (lower is better)
Translates to: EKYCYPHTIPPALRD*SLGSQREPPGEGTK
Trigger: TTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCGTGTGGGGATAGCAATACTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 90 bp TTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTaGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGAT +
Preference number: 1 (lower is better)
Translates to: LGLRESRPEKEPKCA*FTFQGREVLQVAAD
Trigger: ATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 90 bp GACCCAATCTCCAAAAACGTATGGTTGACAAAGACAGCTGACTGCTaGGGTAAAACTGCAGCAGTCATAATCGAAGAGCGAAAGAGGCCA +
Preference number: 1 (lower is better)
Translates to: DPISKNVWLTKTADC*GKTAAVIIEERKRP
Trigger: TGGCCTCTTTCGCTCTTCGATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATACGTTTTTGGAGATTGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR GCA 90 bp GTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTaGCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCC +
Preference number: 1 (lower is better)
Translates to: VNSFYSLPNWTVYQN*PGLVTMNLISLDFP
Trigger: GGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR TCA 90 bp CGACTGTCCGAAGAACACATTCTGGCTGATAAGTCTCAGCTCCTGTaGGGTCCTGATGAGTATCTAAACAACCTCACATTTTCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: RLSEEHILADKSQLL*GPDEYLNNLTFSLP
Trigger: TGGAAGAGAAAATGTGAGGTTGTTTAGATACTCATCAGGACCTCACAGGAGCTGAGACTTATCAGCCAGAATGTGTTCTTCGGACAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR TCA 90 bp AGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGAGGCAGAGTGGGGGTaGCCCAGGGCTTCCGGTTCC +
Preference number: 2 (lower is better)
Translates to: SRPEKEPKCAWFTFQGREEAEWG*PRASGS
Trigger: GGAACCGGAAGCCCTGGGTCACCCCCACTCTGCCTC...CTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp AGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCCTGCTGGTCATTaGGTGCGCATCTGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: SRPEKEPKCAWFTFQGREVPAGH*VRICGL
Trigger: AAGCCCACAGATGCGCACGCAATGACCAGCAGGAAC...CTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR TCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGAGGCAGAGTGGGGGTaGCCCAGGGCTTCCGGTTCC +
Preference number: 2 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMEAEWG*PRASGS
Trigger: GGAACCGGAAGCCCTGGGTCACCCCCACTCTGCCTC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp CTCACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACAAGGGCTTCCGGTTCCTaGTGGTCATTGCGTGCGCAT +
Preference number: 2 (lower is better)
Translates to: LTFSLPRLGLRPALSPHTRASGS*WSLRAH
Trigger: ATGCGCACGCAATGACCAGCAGGAACCGGAAGCCCT...TGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTTTGCGTGCGCATCTGTaGGCTTCACAATTCCCCACT +
Preference number: 2 (lower is better)
Translates to: GSKDRKLEPETRISTLPLLRAHL*ASQFPT
Trigger: AGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAA...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTCTCAAGCATCTTCTCTaGCACTGCGGTGCCCAATAT +
Preference number: 2 (lower is better)
Translates to: GSKDRKLEPETRISTLPLLKHLL*HCGAQY
Trigger: ATATTGGGCACCGCAGTGCCAGAGAAGATGCTTGAG...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTTCTCTGGCACTGCGGTaGCCAATATTTTTGTATGGT +
Preference number: 2 (lower is better)
Translates to: GSKDRKLEPETRISTLPLSLALR*PIFLYG
Trigger: ACCATACAAAAATATTGGGCACCGCAGTGCCAGAGA...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR TCA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAACGATACCACCAGCACTaGGGGACTGCAGCCTTGGGT +
Preference number: 2 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKRYHQH*GTAALG
Trigger: ACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCG...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp CCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCCTGCTTGATGTCCCAGCACTGAGGGACTaGAGCCTTGGGTCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PRTCHHEFNLPGFSLLDVPALRD*SLGSQR
Trigger: TCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGG...GACATCAAGCAGGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGCTCAAGCATCTTCTCTaGCACTGCGGTGCCCAATAT +
Preference number: 2 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQLKHLL*HCGAQY
Trigger: ATATTGGGCACCGCAGTGCCAGAGAAGATGCTTGAG...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTCCTGCTGGTCATTaGGTGCGCATCTGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMVPAGH*VRICGL
Trigger: AAGCCCACAGATGCGCACGCAATGACCAGCAGGAAC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTAGGGCTTCCGGTTCCTaGTGGTCATTGCGTGCGCAT +
Preference number: 2 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFRASGS*WSLRAH
Trigger: ATGCGCACGCAATGACCAGCAGGAACCGGAAGCCCT...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCAAGATACTGAAGATTTaGAACATGTTCTCCAGTAAG +
Preference number: 2 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCKILKI*NMFSSK
Trigger: CTTACTGGAGAACATGTTCCAAATCTTCAGTATCTT...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCTCTCTGGCACTGCGGTaGCCAATATTTTTGTATGGT +
Preference number: 2 (lower is better)
Translates to: AGHCVRICGLHNSPLLKISLALR*PIFLYG
Trigger: ACCATACAAAAATATTGGGCACCGCAGTGCCAGAGA...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGACCGTTTACCAGAACTaGCCAGGACTTGTCACCATG +
Preference number: 2 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMTVYQN*PGLVTM
Trigger: CATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGT...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACCCAGCACTGAGGGACTaGAGCCTTGGGTCTCAGAGA +
Preference number: 2 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHPALRD*SLGSQR
Trigger: TCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGG...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACGCTTCCGGTTCCTGCTaGTCATTGCGTGCGCATCTG +
Preference number: 2 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHASGSC*SLRAHL
Trigger: CAGATGCGCACGCAATGACCAGCAGGAACCGGAAGC...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCCCGAAGAACACATTCTaGCTGATAAGTCTCAGCTCC +
Preference number: 2 (lower is better)
Translates to: VWLTKTADCWGKTAAVIIPKNTF*LISLSS
Trigger: GGAGCTGAGACTTATCAGCCAGAATGTGTTCTTCGG...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACCTGCTGGTCATTGCGTaGGCATCTGTGGGCTTCACA +
Preference number: 2 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHLLVIA*ASVGFT
Trigger: TGTGAAGCCCACAGATGCGCACGCAATGACCAGCAG...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR GCA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAAAGGGCAGAGAAGTATTaGTATCCCCACACGATACCA +
Preference number: 2 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKRAEKY*YPHTIP
Trigger: TGGTATCGTGTGGGGATAGCAATACTTCTCTGCCCT...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCCCCAATATTTTTGTATaGTGTAAGTCCTCTGTGTAT +
Preference number: 2 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTPNIFV*CKSSVY
Trigger: ATACACAGAGGACTTACACCATACAAAAATATTGGG...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTGAACCAAAGTGTGCTTaGTTCACATTTCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFEPKCA*FTFQGR
Trigger: CCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTC...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR TCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGGAGAGAACAAGATACTaGAGATTTGGAACATGTTCT +
Preference number: 2 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKERTRY*RFGTCS
Trigger: AGAACATGTTCCAAATCTTCAGTATCTTGTTCTCTC...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CCA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTAAGATACTGAAGATTTaGAACATGTTCTCCAGTAAG +
Preference number: 2 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFKILKI*NMFSSK
Trigger: CTTACTGGAGAACATGTTCCAAATCTTCAGTATCTT...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR TCA 90 bp GTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACATAGAGAGAACAAGATACTaGAGATTTGGAACATGTTCT +
Preference number: 2 (lower is better)
Translates to: VPRAGVHIKNELYSIKHIERTRY*RFGTCS
Trigger: AGAACATGTTCCAAATCTTCAGTATCTTGTTCTCTC...TATGTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR GCA 72 bp TGCTATCCCCACACGATACCACCAGCACTGAGGGACTaGAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAA +
Preference number: 3 (lower is better)
Translates to: CYPHTIPPALRD*SLGSQREPPGE
Trigger: TTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCGTGTGGGGATAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 72 bp CCACACGATACCACCAGCACTGAGGGACTGCAGCCTTaGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAA +
Preference number: 3 (lower is better)
Translates to: PHDTTSTEGLQP*VSERAARRRNQ
Trigger: TTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 72 bp AGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTaGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGTT +
Preference number: 3 (lower is better)
Translates to: RESRPEKEPKCA*FTFQGREVLQV
Trigger: AACTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CAA 90 bp GACCGTTTACCAGAACTGCCCAGGACTTGTCACCATGAATTTAATCTCCCTGGAGGTTCCTGCTGGTCATaGCGTGCGCATCTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: DRLPELPRTCHHEFNLPGGSCWS*RAHLWA
Trigger: AGCCCACAGATGCGCACGCAATGACCAGCAGGAACC...TCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CAA 90 bp GTTTCTGTTAATGCATCTTACTCTCTTTCAAACGAATCGTCCCTAGAGCAGGTGGGTTCCTGCTGGTCATaGCGTGCGCATCTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: VSVNASYSLSNESSLEQVGSCWS*RAHLWA
Trigger: AGCCCACAGATGCGCACGCAATGACCAGCAGGAACC...CACCTGCTCTAGGGACGATTCGTTTGAAAGAGAGTAAGATGCATTAACAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR GCA 72 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTaGCCAGGACTTGTCACCATGAATTTAATCTCCCTG +
Preference number: 3 (lower is better)
Translates to: FYSLPNWTVYQN*PGLVTMNLISL
Trigger: CAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CAA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAACGGTGCCCAATATTTTaGTATGGTGTAAGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: FQGREVLQVAADIKSPAERCPIF*YGVSPL
Trigger: CAGAGGACTTACACCATACAAAAATATTGGGCACCG...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR-3UTR CAA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGCGGTGCCCAATATTTTaGTATGGTGTAAGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMRCPIF*YGVSPL
Trigger: CAGAGGACTTACACCATACAAAAATATTGGGCACCG...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 72 bp TCCAAAAACGTATGGTTGACAAAGACAGCTGACTGCTaGGGTAAAACTGCAGCAGTCATAATCGAAGAGCGA +
Preference number: 3 (lower is better)
Translates to: SKNVWLTKTADC*GKTAAVIIEER
Trigger: TCGCTCTTCGATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATACGTTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CCA 72 bp TTTAAAATCTGCCCCCTAACCAGATGTGAAACAACGTaGACAAGGGTGACATGTGCTAGACCCAATCTCCAA +
Preference number: 3 (lower is better)
Translates to: FKICPLTRCETT*TRVTCARPNLQ
Trigger: TTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTCACATCTGGTTAGGGGGCAGATTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR TCA 72 bp GAAGAACACATTCTGGCTGATAAGTCTCAGCTCCTGTaGGGTCCTGATGAGTATCTAAACAACCTCACATTT +
Preference number: 3 (lower is better)
Translates to: EEHILADKSQLL*GPDEYLNNLTF
Trigger: AAATGTGAGGTTGTTTAGATACTCATCAGGACCTCACAGGAGCTGAGACTTATCAGCCAGAATGTGTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCCCGTCCCCCGATTGCTaGGGCTCACCCGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCPSPDC*GSPETR
Trigger: CCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGG...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTCCTGGGGCGAGAGGCTaGCGTCCCCCGATTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLPGARG*RPPIAA
Trigger: CGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGG...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp CTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACAAGGGTCGGTGGCGCTaGGCAAGGGGCGTGCTACGG +
Preference number: 4 (lower is better)
Translates to: LGSQREPPGEGTKVCLVHKGRWR*ARGVLR
Trigger: CCGTAGCACGCCCCTTGCCCAGCGCCACCGACCCTT...GTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCGCCCCCTCCACCTGCTaGGCGCCGCTTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTAPSTC*APLVSS
Trigger: GGAGGAGACAAGCGGCGCGCAGCAGGTGGAGGGGGC...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp CTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACGGCTGCGACCTCAATTaGCTCGGCCTGGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: LGSQREPPGEGTKVCLVHGCDLN*LGLGRE
Trigger: CTCTCGCCCCAGGCCGAGGCAATTGAGGTCGCAGCC...GTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCGTCCTCGCCAGCGTCTaGCCTTGCGTCCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIVLASV*PCVPGG
Trigger: GCCCCCGGGGACGCAAGGGCAGACGCTGGCGAGGAC...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCGCCGCGGAGGTGCAGTaGACGGCTGGAGAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTAAEVQ*TAGEGC
Trigger: GCAGCCCTCTCCAGCCGTGCACTGCACCTCCGCGGC...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCCGCGGGCCGCGGAGGTaGAGTGCACGGCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIRGPRR*SARLER
Trigger: CCTCTCCAGCCGTGCACTGCACCTCCGCGGCCCGCG...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCGTTGGGTCCCCAGCTTaGGATACCTCGGGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCVGSPA*DTSGEL
Trigger: TAGCTCCCCCGAGGTATCCCAAGCTGGGGACCCAAC...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTAGGGCAAACTCCGCTTaGCCCCAAGCCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLRANSA*PQASAP
Trigger: GGGCGCAGAGGCTTGGGGCCAAGCGGAGTTTGCCCT...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR TCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAATCCTCGGGCTCCCTCTaGGCCTCCCCGCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAESSGSL*ASPRGS
Trigger: CGAGCCCCGCGGGGAGGCTCAGAGGGAGCCCGAGGA...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACAAAGCTCGCCCCCTCCACCTaGTGCGCGCCGCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: TFSLPRLGLRPALSPHTKLAPST*CAPLVS
Trigger: GGAGACAAGCGGCGCGCAGCAGGTGGAGGGGGCGAG...CTTTGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGCCGGCGCGCCCTTCCTaGCGGACCCTCGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKPARPS*RTLGVH
Trigger: ATGGACGCCGAGGGTCCGGCAGGAAGGGCGCGCCGG...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCCCCCGGCTCCTGCTGTaGCCCATCCCCTACCCTGTC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTPRLLL*PIPYPV
Trigger: GACAGGGTAGGGGATGGGCCACAGCAGGAGCCGGGG...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGGAGGCAGAGTGGGGGTaGCCCAGGGCTTCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQEAEWG*PRASGS
Trigger: GGAACCGGAAGCCCTGGGTCACCCCCACTCTGCCTC...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTCCCCTTCTGCCCAGCTaGAACTCCCTGGACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLPLLPS*NSLDSS
Trigger: GGAAGAGTCCAGGGAGTTTCAGCTGGGCAGAAGGGG...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCGGGACCTCAGGCCTCTaGTCCGCCTCCTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIGTSGL*SASSCL
Trigger: GAGGCAGGAGGAGGCGGAGCAGAGGCCTGAGGTCCC...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCGCTTGGGTAAGAGGTTaGAGTCAGCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCAWVRG*SQPASA
Trigger: AGCTGACGCTGGCTGACTGCAACCTCTTACCCAAGC...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCGTTCCTGCTGGTCATTaGGTGCGCATCTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCVPAGH*VRICGL
Trigger: AAGCCCACAGATGCGCACGCAATGACCAGCAGGAAC...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAATCCTCGGGCTCCCTCTaGGCCTCCCCGCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKSSGSL*ASPRGS
Trigger: CGAGCCCCGCGGGGAGGCTCAGAGGGAGCCCGAGGA...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAACGGCCAGGTGGTTGCTaGGCTGGGCCTCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAERPGGC*AGPQAP
Trigger: CGGAGCCTGAGGCCCAGCTCAGCAACCACCTGGCCG...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGAGGCAGAGTGGGGGTaGCCCAGGGCTTCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKEAEWG*PRASGS
Trigger: GGAACCGGAAGCCCTGGGTCACCCCCACTCTGCCTC...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GACCGTTTACCAGAACTGCCCAGGACTTGTCACCATGAATTTAATCTCCCTGGAGCCCCCTCCACCTGCTaGGCGCCGCTTGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DRLPELPRTCHHEFNLPGAPSTC*APLVSS
Trigger: GGAGGAGACAAGCGGCGCGCAGCAGGTGGAGGGGGC...TCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGCTGCCGTCCCCCGATTaGTGCGGCTCACCCGAGACC +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKLPSPD*CGSPET
Trigger: GGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAG...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCAAGAGGGTGATGTCGTaGTCCTGCCCCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIKRVMS*SCPRAR
Trigger: CCGGGCCCTGGGGCAGGAGCACGACATCACCCTCTT...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGAAGAGGGTGATGTCGTaGTCCTGCCCCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQKRVMS*SCPRAR
Trigger: CCGGGCCCTGGGGCAGGAGCACGACATCACCCTCTT...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTCCAGCACTGAGGGACTaGAGCCTTGGGTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLPALRD*SLGSQR
Trigger: TCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGG...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACAAAGCCGGCTCCGGGATCCTaGGGCAAAGGTTTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TFSLPRLGLRPALSPHTKPAPGS*GKGLAG
Trigger: CCCGGCTAAACCTTTGCCGCAGGATCCCGGAGCCGG...CTTTGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp GTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGGTCCCCTCACCAGTAGGTGGTTGCTGAGCTaGGCCTCAGGCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VSPLCMIIQESPRGPLTSRWLLS*ASGSAA
Trigger: CGCCGCGGAGCCTGAGGCCCAGCTCAGCAACCACCT...ACTGGTGAGGGGACCTCTTGGTGATTCCTGGATGATCATACACAGAGGACTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCGAGGGACTGCAGCCTTaGGTCTCAGAGAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTEGLQP*VSERAA
Trigger: GGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTC...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCCGGCCAGGTGGTTGCTaGGCTGGGCCTCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIIRPGGC*AGPQAP
Trigger: CGGAGCCTGAGGCCCAGCTCAGCAACCACCTGGCCG...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCCGATACCACCAGCACTaGGGGACTGCAGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTRYHQH*GTAALG
Trigger: ACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCG...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCCTCGCCCCCTCCACCTaGTGCGCGCCGCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIILAPST*CAPLVS
Trigger: GGAGACAAGCGGCGCGCAGCAGGTGGAGGGGGCGAG...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAAGTCCTCGCCAGCGTCTaGCCTTGCGTCCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKVLASV*PCVPGG
Trigger: GCCCCCGGGGACGCAAGGGCAGACGCTGGCGAGGAC...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp CCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCCTGCTTGATGTCGTGATGTCGTGCTCCTaGCCCAGGGCCCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PRTCHHEFNLPGFSLLDVVMSCS*PRARGS
Trigger: CGAGCCCCGGGCCCTGGGGCAGGAGCACGACATCAC...GACATCAAGCAGGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGCCCCGATTGCGCGTCTaGTTCCCACCGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKPRLRV*FPPGPQ
Trigger: TTGGGGTCCCGGTGGGAAGCAGACGCGCAATCGGGG...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGTCGCTCCTGCGCCTTTaGAAGTGCCCGGCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKSLLRL*KCPARC
Trigger: ACAGCGGGCCGGGCACTTCCAAAGGCGCAGGAGCGA...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGCTGCTTAAGGGTCGGTaGCGCTGGGCAAGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKLLKGR*RWARGV
Trigger: CACGCCCCTTGCCCAGCGCCACCGACCCTTAAGCAG...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR TCA 90 bp CTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACTCCTTCCAGAAACAGTaGCATCCTCGGTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGSQREPPGEGTKVCLVHSFQKQ*HPRCCR
Trigger: CCTACAGCACCGAGGATGTCACTGTTTCTGGAAGGA...GTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTCCCCCTAACCAGATGTaGAACAACGTGGACAAGGGT +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLPPNQM*NNVDKG
Trigger: ACCCTTGTCCACGTTGTTTCACATCTGGTTAGGGGG...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCACAAAGACAGCTGACTaGTGGGGTAAAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCTKTAD*WGKTAA
Trigger: TGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGT...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCCTGCGCCTTTGGAAGTaGCCGGCCCGCTGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIILRLWK*PARCPL
Trigger: CAGCGGACAGCGGGCCGGGCACTTCCAAAGGCGCAG...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTCTCCTCCCCTCCTTaGGGCACCTCGGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMVSSPP*GTSAPS
Trigger: GGAGGGTGCCGAGGTGCCCCAAGGAGGGGAGGAGAC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAATCAATTGCCTCGGCCTaGGGCGAGAGGCTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAESIASA*GERLPS
Trigger: GGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGA...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGAGGTGGTTGCTGAGCTaGGCCTCAGGCTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMRWLLS*ASGSAA
Trigger: CGCCGCGGAGCCTGAGGCCCAGCTCAGCAACCACCT...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGCCGCGGCCTCGGCCATaGCCGCAGATCCCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMPRPRP*PQIPVL
Trigger: AAGGACAGGGATCTGCGGCCATGGCCGAGGCCGCGG...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGGCTGCGACCTCAATTaGCTCGGCCTGGGGCGAGAG +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMGCDLN*LGLGRE
Trigger: CTCTCGCCCCAGGCCGAGGCAATTGAGGTCGCAGCC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGCCTCCCCATGTGGGCTaGTGTCGGGGGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKPPHVG*CRGIPL
Trigger: AAGAGGAATCCCCCGACAGCAGCCCACATGGGGAGG...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGCCGGGAGCCAGGTTCTaGAGGTCTGCGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKPGARF*RSAGFL
Trigger: AAGGAAACCCGCAGACCTGCAGAACCTGGCTCCCGG...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGGGCTGCTTCGCTCCTaGGCCTTTGGAAGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMGLLRS*AFGSAR
Trigger: CCGGGCACTTCCAAAGGCGCAGGAGCGAAGCAGCCC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGCTACGGGGCCCTCTGTaGTCCTTGAAGGACGCCGGC +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMLRGPL*SLKDAG
Trigger: GCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAG...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp CCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCCTGCTTGATGTCGGAGGCCTCCCCATGTaGGCTGCTGTCGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: PRTCHHEFNLPGFSLLDVGGLPM*AAVGGF
Trigger: GAATCCCCCGACAGCAGCCCACATGGGGAGGCCTCC...GACATCAAGCAGGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGCTCTTCCTCCACTGCTaGAGCTTCTCCCCGATTGCG +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQLFLHC*SFSPIA
Trigger: CGCAATCGGGGAGAAGCTCCAGCAGTGGAGGAAGAG...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
3UTR CAA 72 bp CAGCACTCAGCCCACACACAAAGCTGTGATGAGAGGTaGGTTAGGGATGGTGGAGGCAAAGCCACAGATCAG +
Preference number: 4 (lower is better)
Translates to: QHSAHTQSCDER*VRDGGGKATDQ
Trigger: CTGATCTGTGGCTTTGCCTCCACCATCCCTAACCAACCTCTCATCACAGCTTTGTGTGTGGGCTGAGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAACCGGGAGCCAGGTTCTaGAGGTCTGCGGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAEPGARF*RSAGFL
Trigger: AAGGAAACCCGCAGACCTGCAGAACCTGGCTCCCGG...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGAGGGCTTCCGGTTCCTaGTGGTCATTGCGTGCGCAT +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKRASGS*WSLRAH
Trigger: ATGCGCACGCAATGACCAGCAGGAACCGGAAGCCCT...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTAGGGCAGAGAAGTATTaGTATCCCCACACGATACCA +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLRAEKY*YPHTIP
Trigger: TGGTATCGTGTGGGGATAGCAATACTTCTCTGCCCT...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCGAGCTTCTCCCCGATTaGGCGTCTGCTTCCCACCGG +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIIELLPD*ASASHR
Trigger: CCGGTGGGAAGCAGACGCGCAATCGGGGAGAAGCTC...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTGAACCAAAGTGTGCTTaGTTCACATTTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLEPKCA*FTFQGR
Trigger: CCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTC...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ATATTTTTGTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGACCGGCGCGCCCTTCCTaGCGGACCCTCGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: IFLYGVSPLCMIIQESPRPARPS*RTLGVH
Trigger: ATGGACGCCGAGGGTCCGGCAGGAAGGGCGCGCCGG...TCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATACAAAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACCCTGGGGCGAGAGGCTaGCGTCCCCCGATTGCTGCG +
Preference number: 4 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHPGARG*RPPIAA
Trigger: CGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGG...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGCTGCTGGTCATTGCGTaGGCATCTGTGGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKLLVIA*ASVGFT
Trigger: TGTGAAGCCCACAGATGCGCACGCAATGACCAGCAG...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCTTAGATTCGGGATGTTaGGTCCCCAGCTTGGGATAC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTLDSGC*VPSLGY
Trigger: GTATCCCAAGCTGGGGACCCAACATCCCGAATCTAA...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCTACTCCCTCCCTAACTaGACCGTTTACCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTYSLPN*TVYQNC
Trigger: GCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTA...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGCCCCCTAACCAGATGTaGAACAACGTGGACAAGGGT +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKPPNQM*NNVDKG
Trigger: ACCCTTGTCCACGTTGTTTCACATCTGGTTAGGGGG...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTCTGCCGTCCCCCGATTaGTGCGGCTCACCCGAGACC +
Preference number: 4 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFLPSPD*CGSPET
Trigger: GGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAG...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ATATTTTTGTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGACTCCGCCTCCTCCGCTaGGTCCCAGGCGAGCTCACC +
Preference number: 4 (lower is better)
Translates to: IFLYGVSPLCMIIQESPRLRLLR*VPGELT
Trigger: GGTGAGCTCGCCTGGGACGCAGCGGAGGAGGCGGAG...TCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATACAAAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACATAGTGATGTCGTGCTCCTaGCCCAGGGCCCGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VPRAGVHIKNELYSIKHIVMSCS*PRARGS
Trigger: CGAGCCCCGGGCCCTGGGGCAGGAGCACGACATCAC...TATGTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGGTCCCCTGTTCCTGCTGGTCATTaGGTGCGCATCTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VWCKSSVYDHPGITKRSPVPAGH*VRICGL
Trigger: AAGCCCACAGATGCGCACGCAATGACCAGCAGGAAC...AGGGGACCTCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACGCTGGGCAAGGGGCGTaGTACGGGGCCCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHAGQGA*YGALCA
Trigger: AGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGC...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGTTAGATTCGGGATGTTaGGTCCCCAGCTTGGGATAC +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQLDSGC*VPSLGY
Trigger: GTATCCCAAGCTGGGGACCCAACATCCCGAATCTAA...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGCTTCCGGTTCCTGCTaGTCATTGCGTGCGCATCTG +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMASGSC*SLRAHL
Trigger: CAGATGCGCACGCAATGACCAGCAGGAACCGGAAGC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGTACTCCCTCCCTAACTaGACCGTTTACCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQYSLPN*TVYQNC
Trigger: GCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTA...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTTATTCACATCCGTCTTaGCTTCACCATCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLYSHPS*LHHQKS
Trigger: TGACTTTTGATGGTGAAGTCAAGACGGATGTGAATA...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GGGAGCAAAGACAGGAAGCTGGAACCAGAGACACGGATAAGCACCCTCCCCCTTAGCAGGTTCTTTTCATaGATCTCATTTGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: GSKDRKLEPETRISTLPLSRFFS*ISFASF
Trigger: GAAGGATGCAAATGAGATTCATGAAAAGAACCTGCT...AAGGGGGAGGGTGCTTATCCGTGTCTCTGGTTCCAGCTTCCTGTCTTTGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GTTTCTGTTAATGCATCTTACTCTCTTTCAAACGAATCGTCCCTAGAGCAGGTGCGATACCACCAGCACTaGGGGACTGCAGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VSVNASYSLSNESSLEQVRYHQH*GTAALG
Trigger: ACCCAAGGCTGCAGTCCCTCAGTGCTGGTGGTATCG...CACCTGCTCTAGGGACGATTCGTTTGAAAGAGAGTAAGATGCATTAACAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAACAACGTGGACAAGGGTaGCATGTGCTAGACCCAATC +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAEQRGQG*HVLDPI
Trigger: GATTGGGTCTAGCACATGTCACCCTTGTCCACGTTG...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GGAGTAAAATTGAAGGCGATTGTTAAAATGTCCTTCTTTACACCCTCTGATATTCCGTCCCCCGATTGCTaGGGCTCACCCGAGACCCGG +
Preference number: 4 (lower is better)
Translates to: GVKLKAIVKMSFFTPSDIPSPDC*GSPETR
Trigger: CCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGG...AATATCAGAGGGTGTAAAGAAGGACATTTTAACAATCGCCTTCAATTTTACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GGAGTAAAATTGAAGGCGATTGTTAAAATGTCCTTCTTTACACCCTCTGATATTCTCCGCCTCCTCCGCTaGGTCCCAGGCGAGCTCACC +
Preference number: 4 (lower is better)
Translates to: GVKLKAIVKMSFFTPSDILRLLR*VPGELT
Trigger: GGTGAGCTCGCCTGGGACGCAGCGGAGGAGGCGGAG...AATATCAGAGGGTGTAAAGAAGGACATTTTAACAATCGCCTTCAATTTTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCAGGGCAGAGAAGTATTaGTATCCCCACACGATACCA +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIRAEKY*YPHTIP
Trigger: TGGTATCGTGTGGGGATAGCAATACTTCTCTGCCCT...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGACCGTTTACCAGAACTaGCCAGGACTTGTCACCATG +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKTVYQN*PGLVTM
Trigger: CATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGT...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TGTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGATACTGAAGATTTGACGGCTGGAGAGGGCTaGTTCGCTCCTGCGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CDREREREREREQDTEDLTAGEG*FAPAPL
Trigger: CAAAGGCGCAGGAGCGAAGCAGCCCTCTCCAGCCGT...CAAATCTTCAGTATCTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGGACTCTTCCTCCACTaGTGGAGCTTCTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMGLFLH*WSFSPI
Trigger: AATCGGGGAGAAGCTCCAGCAGTGGAGGAAGAGTCC...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CCA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTTCAATTGCCTCGGCCTaGGGCGAGAGGCTGCCGTCC +
Preference number: 4 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFSIASA*GERLPS
Trigger: GGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGA...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GTTTCTGTTAATGCATCTTACTCTCTTTCAAACGAATCGTCCCTAGAGCAGGTGGTTGGGTCCCCAGCTTaGGATACCTCGGGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: VSVNASYSLSNESSLEQVVGSPA*DTSGEL
Trigger: TAGCTCCCCCGAGGTATCCCAAGCTGGGGACCCAAC...CACCTGCTCTAGGGACGATTCGTTTGAAAGAGAGTAAGATGCATTAACAGAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGGAACCAAAGTGTGCTTaGTTCACATTTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQEPKCA*FTFQGR
Trigger: CCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTC...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TGTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGATACTGAAGATTTGGAGGGACTGCAGCCTTaGGTCTCAGAGAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: CDREREREREREQDTEDLEGLQP*VSERAA
Trigger: GGCGGCTCTCTCTGAGACCCAAGGCTGCAGTCCCTC...CAAATCTTCAGTATCTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCTCCTTCCAGAAACAGTaGCATCCTCGGTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIISFQKQ*HPRCCR
Trigger: CCTACAGCACCGAGGATGTCACTGTTTCTGGAAGGA...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp CTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACTCTTTTTGCAACATCTaGATATGCGTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: LGSQREPPGEGTKVCLVHSFCNI*ICVFNL
Trigger: GAGATTGAACACGCATATTCAGATGTTGCAAAAAGA...GTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGAAGTCTCAGCTCCTGTaGGGTCCTGATGAGTATCTA +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKKSQLL*GPDEYL
Trigger: TAGATACTCATCAGGACCTCACAGGAGCTGAGACTT...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCCCAAAAACGTATGGTTaGCAAAGACAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIPKTYG*QRQLTA
Trigger: AGCAGTCAGCTGTCTTTGTCAACCATACGTTTTTGG...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp CCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCCTGCTTGATGTCCAACGTGGACAAGGGTaGCATGTGCTAGACCCAATC +
Preference number: 4 (lower is better)
Translates to: PRTCHHEFNLPGFSLLDVQRGQG*HVLDPI
Trigger: GATTGGGTCTAGCACATGTCACCCTTGTCCACGTTG...GACATCAAGCAGGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCAAACACGTCATTTCCTaGGGAATTAGATTCGGGATG +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTKHVIS*GIRFGM
Trigger: CATCCCGAATCTAATTCCGCAGGAAATGACGTGTTT...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAAGCTTGGGTAAGAGGTTaGAGTCAGCCAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKAWVRG*SQPASA
Trigger: AGCTGACGCTGGCTGACTGCAACCTCTTACCCAAGC...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTTTCTGTTAATGCATCTTACTCTCTTTCAAACGAATCGTCCCTAGAGCAGGTGCCAGCACTGAGGGACTaGAGCCTTGGGTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: VSVNASYSLSNESSLEQVPALRD*SLGSQR
Trigger: TCTCTGAGACCCAAGGCTGCAGTCCCTCAGTGCTGG...CACCTGCTCTAGGGACGATTCGTTTGAAAGAGAGTAAGATGCATTAACAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GGAGTAAAATTGAAGGCGATTGTTAAAATGTCCTTCTTTACACCCTCTGATATTGTCTCCTCCCCTCCTTaGGGCACCTCGGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: GVKLKAIVKMSFFTPSDIVSSPP*GTSAPS
Trigger: GGAGGGTGCCGAGGTGCCCCAAGGAGGGGAGGAGAC...AATATCAGAGGGTGTAAAGAAGGACATTTTAACAATCGCCTTCAATTTTACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAACTCAAGCATCTTCTCTaGCACTGCGGTGCCCAATAT +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAELKHLL*HCGAQY
Trigger: ATATTGGGCACCGCAGTGCCAGAGAAGATGCTTGAG...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp CCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCCTGCTTGATGTCTTGCGTGCGCATCTGTaGGCTTCACAATTCCCCACT +
Preference number: 4 (lower is better)
Translates to: PRTCHHEFNLPGFSLLDVLRAHL*ASQFPT
Trigger: AGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAA...GACATCAAGCAGGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGCCGAAGAACACATTCTaGCTGATAAGTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKPKNTF*LISLSS
Trigger: GGAGCTGAGACTTATCAGCCAGAATGTGTTCTTCGG...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GACCGTTTACCAGAACTGCCCAGGACTTGTCACCATGAATTTAATCTCCCTGGAAAGACAGCTGACTGCTaGGGTAAAACTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: DRLPELPRTCHHEFNLPGKTADC*GKTAAV
Trigger: GACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTT...TCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGATCATAAAGAGACGCTaGGAAAACGGGCAATTTCCG +
Preference number: 4 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKIIKRR*ENGQFP
Trigger: CGGAAATTGCCCGTTTTCTCAGCGTCTCTTTATGAT...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GACCGTTTACCAGAACTGCCCAGGACTTGTCACCATGAATTTAATCTCCCTGGACACCATCAAAAGTCATaGAAGGAGGGTTTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: DRLPELPRTCHHEFNLPGHHQKS*KEGLFR
Trigger: CCGGAACAAACCCTCCTTTCATGACTTTTGATGGTG...TCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCTATTCACATCCGTCTTaGCTTCACCATCAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTYSHPS*LHHQKS
Trigger: TGACTTTTGATGGTGAAGTCAAGACGGATGTGAATA...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp CTCACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACAAGCAGGTTCTTTTCATaGATCTCATTTGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LTFSLPRLGLRPALSPHTSRFFS*ISFASF
Trigger: GAAGGATGCAAATGAGATTCATGAAAAGAACCTGCT...TGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GACCGTTTACCAGAACTGCCCAGGACTTGTCACCATGAATTTAATCTCCCTGGAAAGTCTCAGCTCCTGTaGGGTCCTGATGAGTATCTA +
Preference number: 4 (lower is better)
Translates to: DRLPELPRTCHHEFNLPGKSQLL*GPDEYL
Trigger: TAGATACTCATCAGGACCTCACAGGAGCTGAGACTT...TCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTCCTCCCCATGTGGGCTaGTGTCGGGGGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFPPHVG*CRGIPL
Trigger: AAGAGGAATCCCCCGACAGCAGCCCACATGGGGAGG...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGGAAGGAACCAAAGTGTaGTTGGTTCACATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKEGTKV*LVHISG
Trigger: CCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTC...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp AGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGACAATCTTAATAATATaGAGCTTGGGTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRPEKEPKCAWFTFQGRETILII*SLGKRL
Trigger: CAACCTCTTACCCAAGCTCCATATTATTAAGATTGT...CTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCAATCTCTTGATCAGCTaGACACGTATTTGTGAACTC +
Preference number: 4 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTNLLIS*TRICEL
Trigger: GAGTTCACAAATACGTGTCCAGCTGATCAAGAGATT...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTTTGCGTGCGCATCTGTaGGCTTCACAATTCCCCACT +
Preference number: 4 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFLRAHL*ASQFPT
Trigger: AGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAA...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGAAGACAGCTGACTGCTaGGGTAAAACTGCAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMKTADC*GKTAAV
Trigger: GACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTT...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCCACCATCAAAAGTCATaGAAGGAGGGTTTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIIHHQKS*KEGLFR
Trigger: CCGGAACAAACCCTCCTTTCATGACTTTTGATGGTG...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp CTCACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACAGAGAGAACAAGATACTaGAGATTTGGAACATGTTCT +
Preference number: 4 (lower is better)
Translates to: LTFSLPRLGLRPALSPHTERTRY*RFGTCS
Trigger: AGAACATGTTCCAAATCTTCAGTATCTTGTTCTCTC...TGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTTCGGGACTCCTTCCTTaGCGCTGCTTAAGGGTCGGT +
Preference number: 4 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFSGLLP*RCLRVG
Trigger: ACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGA...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR GCA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGTCAAGTATCTCCAGATaGCAGTCATTTCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQSSISR*QSFQKE
Trigger: TTCCTTCTGAAATGACTGGCATCTGGAGATACTTGA...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAATCTCTGGCACTGCGGTaGCCAATATTTTTGTATGGT +
Preference number: 4 (lower is better)
Translates to: FQGREVLQVAADIKSPAESLALR*PIFLYG
Trigger: ACCATACAAAAATATTGGGCACCGCAGTGCCAGAGA...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCAATCTCTTGATCAGCTaGACACGTATTTGTGAACTC +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKINLLIS*TRICEL
Trigger: GAGTTCACAAATACGTGTCCAGCTGATCAAGAGATT...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGGTCCCCTAGATGTGAAACAACGTaGACAAGGGTGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: VWCKSSVYDHPGITKRSPRCETT*TRVTCA
Trigger: AGCACATGTCACCCTTGTCCACGTTGTTTCACATCT...AGGGGACCTCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp ACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACAAAGTCTTTTTGCAACATCTaGATATGCGTGTTCAATCTC +
Preference number: 4 (lower is better)
Translates to: TFSLPRLGLRPALSPHTKSFCNI*ICVFNL
Trigger: GAGATTGAACACGCATATTCAGATGTTGCAAAAAGA...CTTTGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGGTCCCCTTGGATTTTCCCTGCTTaGTGTCTAGATGAGACAATG +
Preference number: 4 (lower is better)
Translates to: VWCKSSVYDHPGITKRSPWIFPA*CLDETM
Trigger: CATTGTCTCATCTAGACATCAAGCAGGGAAAATCCA...AGGGGACCTCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGCCAAAAACGTATGGTTaGCAAAGACAGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMPKTYG*QRQLTA
Trigger: AGCAGTCAGCTGTCTTTGTCAACCATACGTTTTTGG...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CAA 72 bp CAAGCATCTTCTCTGGCACTGCGGTGCCCAATATTTTaGTATGGTGTAAGTCCTCTGTGTATGATCATCCAG +
Preference number: 4 (lower is better)
Translates to: QASSLALRCPIF*YGVSPLCMIIQ
Trigger: CTGGATGATCATACACAGAGGACTTACACCATACAAAAATATTGGGCACCGCAGTGCCAGAGAAGATGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGAAACACGTCATTTCCTaGGGAATTAGATTCGGGATG +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMKHVIS*GIRFGM
Trigger: CATCCCGAATCTAATTCCGCAGGAAATGACGTGTTT...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCACAATCTTAATAATATaGAGCTTGGGTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGHCVRICGLHNSPLLKITILII*SLGKRL
Trigger: CAACCTCTTACCCAAGCTCCATATTATTAAGATTGT...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp TGTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGATACTGAAGATTTGCTCAAGCATCTTCTCTaGCACTGCGGTGCCCAATAT +
Preference number: 4 (lower is better)
Translates to: CDREREREREREQDTEDLLKHLL*HCGAQY
Trigger: ATATTGGGCACCGCAGTGCCAGAGAAGATGCTTGAG...CAAATCTTCAGTATCTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTAGATGTGAAACAACGTaGACAAGGGTGACATGTGCT +
Preference number: 4 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFRCETT*TRVTCA
Trigger: AGCACATGTCACCCTTGTCCACGTTGTTTCACATCT...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GGAGTAAAATTGAAGGCGATTGTTAAAATGTCCTTCTTTACACCCTCTGATATTCTGCTGGTCATTGCGTaGGCATCTGTGGGCTTCACA +
Preference number: 4 (lower is better)
Translates to: GVKLKAIVKMSFFTPSDILLVIA*ASVGFT
Trigger: TGTGAAGCCCACAGATGCGCACGCAATGACCAGCAG...AATATCAGAGGGTGTAAAGAAGGACATTTTAACAATCGCCTTCAATTTTACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp CCCAGGACTTGTCACCATGAATTTAATCTCCCTGGATTTTCCCTGCTTGATGTCATCTCCAAAAACGTATaGTTGACAAAGACAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PRTCHHEFNLPGFSLLDVISKNV*LTKTAD
Trigger: GTCAGCTGTCTTTGTCAACCATACGTTTTTGGAGAT...GACATCAAGCAGGGAAAATCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCATCTCCAAAAACGTATaGTTGACAAAGACAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIIISKNV*LTKTAD
Trigger: GTCAGCTGTCTTTGTCAACCATACGTTTTTGGAGAT...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACATAACCGTTTACCAGAACTaGCCAGGACTTGTCACCATG +
Preference number: 4 (lower is better)
Translates to: VPRAGVHIKNELYSIKHITVYQN*PGLVTM
Trigger: CATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGT...TATGTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACCCGAAGAACACATTCTaGCTGATAAGTCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHPKNTF*LISLSS
Trigger: GGAGCTGAGACTTATCAGCCAGAATGTGTTCTTCGG...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp GTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACATAACAAAGACAGCTGACTaGTGGGGTAAAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPRAGVHIKNELYSIKHITKTAD*WGKTAA
Trigger: TGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGT...TATGTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GTATGGTTGACAAAGACAGCTGACTGCTGGGGTAAAACTGCAGCAGTCATAATCCCCAATATTTTTGTATaGTGTAAGTCCTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: VWLTKTADCWGKTAAVIIPNIFV*CKSSVY
Trigger: ATACACAGAGGACTTACACCATACAAAAATATTGGG...GATTATGACTGCTGCAGTTTTACCCCAGCAGTCAGCTGTCTTTGTCAACCATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGCCCAATATTTTTGTATaGTGTAAGTCCTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMPNIFV*CKSSVY
Trigger: ATACACAGAGGACTTACACCATACAAAAATATTGGG...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp TGTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGATACTGAAGATTTGTCAAGTATCTCCAGATaGCAGTCATTTCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: CDREREREREREQDTEDLSSISR*QSFQKE
Trigger: TTCCTTCTGAAATGACTGGCATCTGGAGATACTTGA...CAAATCTTCAGTATCTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR GCA 90 bp ATATTTTTGTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGAAGGAACCAAAGTGTaGTTGGTTCACATTTCAGGG +
Preference number: 4 (lower is better)
Translates to: IFLYGVSPLCMIIQESPREGTKV*LVHISG
Trigger: CCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTC...TCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATACAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
3UTR CAA 72 bp AATCGAAGAGCGAAAGAGGCCACTCTATTAAAGACTTaGTTTCTTTTGCTAGACATTTTTCACCTAATCCCA +
Preference number: 4 (lower is better)
Translates to: NRRAKEATLLKT*FLLLDIFHLIP
Trigger: TGGGATTAGGTGAAAAATGTCTAGCAAAAGAAACAAAGTCTTTAATAGAGTGGCCTCTTTCGCTCTTCGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR TCA 90 bp ATATTTTTGTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGAGAGAACAAGATACTaGAGATTTGGAACATGTTCT +
Preference number: 4 (lower is better)
Translates to: IFLYGVSPLCMIIQESPRERTRY*RFGTCS
Trigger: AGAACATGTTCCAAATCTTCAGTATCTTGTTCTCTC...TCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATACAAAAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CCA 90 bp ATCGTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACAAGATACTGAAGATTTaGAACATGTTCTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IVPRAGVHIKNELYSIKHKILKI*NMFSSK
Trigger: CTTACTGGAGAACATGTTCCAAATCTTCAGTATCTT...GTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGACGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 90 bp TCAATTGCCTCGGCCTGGGGCGAGAGGCTGCCGTCCCCCGATTGCTaGGGCTCACCCGAGACCCGGCGCGCCCTTCCTGCCGGACCCTCG +
Preference number: 5 (lower is better)
Translates to: SIASAWGERLPSPDC*GSPETRRALPAGPS
Trigger: CGAGGGTCCGGCAGGAAGGGCGCGCCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 90 bp ACCTCAATTGCCTCGGCCTGGGGCGAGAGGCTGCCGTCCCCCGATTaGTGCGGCTCACCCGAGACCCGGCGCGCCCTTCCTGCCGGACCC +
Preference number: 5 (lower is better)
Translates to: TSIASAWGERLPSPD*CGSPETRRALPAGP
Trigger: GGGTCCGGCAGGAAGGGCGCGCCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGAGGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 90 bp TCTCGCCCGCGGGCCGCGGAGGTGCAGTGCACGGCTGGAGAGGGCTaGTTCGCTCCTGCGCCTTTGGAAGTGCCCGGCCCGCTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: SRPRAAEVQCTAGEG*FAPAPLEVPGPLSA
Trigger: AGCGGACAGCGGGCCGGGCACTTCCAAAGGCGCAGGAGCGAAGCAGCCCTCTCCAGCCGTGCACTGCACCTCCGCGGCCCGCGGGCGAGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS TCA 90 bp GGTGGCGCTGGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCCTTaGAGGACGCCGGCTCCGGGATCCTGCGGCAAAGGTTTAGCCGGG +
Preference number: 5 (lower is better)
Translates to: GGAGQGACYGALCAP*RTPAPGSCGKGLAG
Trigger: CCCGGCTAAACCTTTGCCGCAGGATCCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS GCA 90 bp AAGGGTCGGTGGCGCTGGGCAAGGGGCGTGCTACGGGGCCCTCTGTaGTCCTTGAAGGACGCCGGCTCCGGGATCCTGCGGCAAAGGTTT +
Preference number: 5 (lower is better)
Translates to: KGRWRWARGVLRGPL*SLKDAGSGILRQRF
Trigger: AAACCTTTGCCGCAGGATCCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACCGACCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS GCA 90 bp GAAACTCCCTGGACTCTTCCTCCACTGCTGGAGCTTCTCCCCGATTaGGCGTCTGCTTCCCACCGGGACCCCAATCTCGCCCGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: ETPWTLPPLLELLPD*ASASHRDPNLARGP
Trigger: CGGCCCGCGGGCGAGATTGGGGTCCCGGTGGGAAGCAGACGCGCAATCGGGGAGAAGCTCCAGCAGTGGAGGAAGAGTCCAGGGAGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCCTGCTTCCTCCTCCCTaGGCCCCTCCGGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCLLPPP*APPGSA
Trigger: AGCGGAGCCCGGAGGGGCCAAGGGAGGAGGAAGCAG...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 90 bp AATGCAGTAAGTTTTACCTTGACGAAGAGGGTGATGTCGTGCTCCTaGCCCAGGGCCCGGGGCTCGGACGCCTCTCCGTCCTCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: NAVSFTLTKRVMSCS*PRARGSDASPSSRR
Trigger: CCGCCGGGAGGACGGAGAGGCGTCCGAGCCCCGGGCCCTGGGGCAGGAGCACGACATCACCCTCTTCGTCAAGGTAAAACTTACTGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360731.7
CDS CCA 90 bp CTGTCCTTGATCGGGACTCCTTCCTTGACGCTGCTTAAGGGTCGGTaGCGCTGGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSLIGTPSLTLLKGR*RWARGVLRGPLCSL
Trigger: CAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGATCAAGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CCA 90 bp TTGATCGGGACTCCTTCCTTGACGCTGCTTAAGGGTCGGTGGCGCTaGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCCTTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LIGTPSLTLLKGRWR*ARGVLRGPLCSLKD
Trigger: GTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGATCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTGTTGGGTCCCCAGCTaGGGATACCTCGGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCCWVPS*GYLGGA
Trigger: AGCTCCCCCGAGGTATCCCAAGCTGGGGACCCAACA...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp CTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACGGAGCTTCTCCCCGATaGCGCGTCTGCTTCCCACCG +
Preference number: 5 (lower is better)
Translates to: LGSQREPPGEGTKVCLVHGASPR*RVCFPP
Trigger: CGGTGGGAAGCAGACGCGCAATCGGGGAGAAGCTCC...GTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCGGCCCTCTGTGCTCCTaGAAGGACGCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTGPLCS*KDAGSG
Trigger: CCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCC...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp GCTGGTCATTGCGTGCGCATCTGTGGGCTTCACAATTCCCCACTCCTTAAAATCCCTGCTGCGCGCCGCTaGTCTCCTCCCCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: AGHCVRICGLHNSPLLKIPAARR*SPPLLG
Trigger: CCCAAGGAGGGGAGGAGACAAGCGGCGCGCAGCAGG...GATTTTAAGGAGTGGGGAATTGTGAAGCCCACAGATGCGCACGCAATGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGGCACAGGCTGCCGTCCCCCGATaGCTGCGGCTCACCCGAGAC +
Preference number: 5 (lower is better)
Translates to: AGRFSKLQQILRVLLKAQAAVPR*LRLTRD
Trigger: GTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGC...CTGTGCCTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGGTCCCCTCACCAGTCCTGCTGCGCGCCGCTaGTCTCCTCCCCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: VSPLCMIIQESPRGPLTSPAARR*SPPLLG
Trigger: CCCAAGGAGGGGAGGAGACAAGCGGCGCGCAGCAGG...ACTGGTGAGGGGACCTCTTGGTGATTCCTGGATGATCATACACAGAGGACTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp AGCCGCCCGGAGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGGTTCCTGCTGGTCATaGCGTGCGCATCTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SRPEKEPKCAWFTFQGREGSCWS*RAHLWA
Trigger: AGCCCACAGATGCGCACGCAATGACCAGCAGGAACC...CTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCTCCGGGCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAAGTGTCTCCTCCCCTCCTaGGGGCACCTCGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: FRAGRFSKLQQILRVLLKCLLPS*GHLGTL
Trigger: GAGGGTGCCGAGGTGCCCCAAGGAGGGGAGGAGACA...CTTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAACGGGGCACTGGGGCCTaGCGCAGGACCCGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKRGTGA*RRTRRA
Trigger: TGCCCTGCGGGTCCTGCGCAAGGCCCCAGTGCCCCG...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp GACCGTTTACCAGAACTGCCCAGGACTTGTCACCATGAATTTAATCTCCCTGGACGGCTGCGACCTCAATaGCCTCGGCCTGGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: DRLPELPRTCHHEFNLPGRLRPQ*PRPGAR
Trigger: TCTCGCCCCAGGCCGAGGCAATTGAGGTCGCAGCCG...TCCAGGGAGATTAAATTCATGGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAATCCTCGGCCAGGTGGTaGCTGAGCTGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: FQGREVLQVAADIKSPAESSARW*LSWASG
Trigger: GCCTGAGGCCCAGCTCAGCAACCACCTGGCCGAGGA...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TTTCAGGGCAGGGAGGTTCTCCAAGTTGCAGCAGATATTAAGAGTCCTGCTGAACAGGGCAAACTCCGCTaGGCCCCAAGCCTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: FQGREVLQVAADIKSPAEQGKLR*APSLCA
Trigger: GGCGCAGAGGCTTGGGGCCAAGCGGAGTTTGCCCTG...TTCAGCAGGACTCTTAATATCTGCTGCAACTTGGAGAACCTCCCTGCCCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAATGTCTCCTCCCCTCCTaGGGGCACCTCGGCACCCTC +
Preference number: 5 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKCLLPS*GHLGTL
Trigger: GAGGGTGCCGAGGTGCCCCAAGGAGGGGAGGAGACA...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTCGCCAGCGTCTGCCCTaGCGTCCCCGGGGGCCGCTT +
Preference number: 5 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFRQRLP*RPRGPL
Trigger: AAGCGGCCCCCGGGGACGCAAGGGCAGACGCTGGCG...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCCGGTGCCCAATATTTTaGTATGGTGTAAGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCRCPIF*YGVSPL
Trigger: CAGAGGACTTACACCATACAAAAATATTGGGCACCG...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTTTCGCTCCTGCGCCTTaGGAAGTGCCCGGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFFAPAP*EVPGPL
Trigger: CAGCGGGCCGGGCACTTCCAAAGGCGCAGGAGCGAA...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp AGAAGGAACCAAAGTGTGCTTGGTTCACATTTCAGGGCAGGGAGGTTCTCCAAGATCGGGACTCCTTCCTaGACGCTGCTTAAGGGTCGG +
Preference number: 5 (lower is better)
Translates to: RRNQSVLGSHFRAGRFSKIGTPS*TLLKGR
Trigger: CCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGAT...CTTGGAGAACCTCCCTGCCCTGAAATGTGAACCAAGCACACTTTGGTTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp GACTGCAGCCTTGGGTCTCAGAGAGAGCCGCCCGGAGAAGGAACCAAAGTGTGCTTAATAATATGGAGCTaGGGTAAGAGGTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: DCSLGSQREPPGEGTKVCLIIWS*GKRLQS
Trigger: TGACTGCAACCTCTTACCCAAGCTCCATATTATTAA...GCACACTTTGGTTCCTTCTCCGGGCGGCTCTCTCTGAGACCCAAGGCTGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTCGGCTGCGACCTCAATaGCCTCGGCCTGGGGCGAGA +
Preference number: 5 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFRLRPQ*PRPGAR
Trigger: TCTCGCCCCAGGCCGAGGCAATTGAGGTCGCAGCCG...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp ATATTTTTGTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGACTGCTTCCTCCTCCCTaGGCCCCTCCGGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: IFLYGVSPLCMIIQESPRLLPPP*APPGSA
Trigger: AGCGGAGCCCGGAGGGGCCAAGGGAGGAGGAAGCAG...TCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATACAAAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTTCCTCGGCCAGGTGGTaGCTGAGCTGGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFSSARW*LSWASG
Trigger: GCCTGAGGCCCAGCTCAGCAACCACCTGGCCGAGGA...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TTCTACTCCCTCCCTAACTGGACCGTTTACCAGAACTGCCCAGGACTTGTCACCTGCGTGTTCAATCTCTaGATCAGCTGGACACGTATT +
Preference number: 5 (lower is better)
Translates to: FYSLPNWTVYQNCPGLVTCVFNL*ISWTRI
Trigger: AATACGTGTCCAGCTGATCAAGAGATTGAACACGCA...GGTGACAAGTCCTGGGCAGTTCTGGTAAACGGTCCAGTTAGGGAGGGAGTAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp CTCACATTTTCTCTTCCACGCCTAGGGTTAAGGCCAGCACTCAGCCCACACACATTATTCACATCCGTCTaGACTTCACCATCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LTFSLPRLGLRPALSPHTLFTSV*TSPSKV
Trigger: GACTTTTGATGGTGAAGTCAAGACGGATGTGAATAA...TGTGTGTGGGCTGAGTGCTGGCCTTAACCCTAGGCGTGGAAGAGAAAATGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGAGGTCCCCTCACCAGTTGCGTGTTCAATCTCTaGATCAGCTGGACACGTATT +
Preference number: 5 (lower is better)
Translates to: VSPLCMIIQESPRGPLTSCVFNL*ISWTRI
Trigger: AATACGTGTCCAGCTGATCAAGAGATTGAACACGCA...ACTGGTGAGGGGACCTCTTGGTGATTCCTGGATGATCATACACAGAGGACTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GGAGTAAAATTGAAGGCGATTGTTAAAATGTCCTTCTTTACACCCTCTGATATTTGTTGGGTCCCCAGCTaGGGATACCTCGGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: GVKLKAIVKMSFFTPSDICWVPS*GYLGGA
Trigger: AGCTCCCCCGAGGTATCCCAAGCTGGGGACCCAACA...AATATCAGAGGGTGTAAAGAAGGACATTTTAACAATCGCCTTCAATTTTACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAAATTAGATTCGGGATGTaGGGTCCCCAGCTTGGGATA +
Preference number: 5 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKIRFGM*GPQLGI
Trigger: TATCCCAAGCTGGGGACCCAACATCCCGAATCTAAT...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GCCAGAAACTCTTTTGAGTCAATAGTTTCTACTCCCTCCCTAACTGGACCGTTTGCAGTAAGTTTTACCTaGACGAAGAGGGTGATGTCG +
Preference number: 5 (lower is better)
Translates to: ARNSFESIVSTPSLTGPFAVSFT*TKRVMS
Trigger: CGACATCACCCTCTTCGTCAAGGTAAAACTTACTGC...AAACGGTCCAGTTAGGGAGGGAGTAGAAACTATTGACTCAAAAGAGTTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360731.7
CDS-3UTR CAA 90 bp ATATTTTTGTATGGTGTAAGTCCTCTGTGTATGATCATCCAGGAATCACCAAGACGCAGATCCCTGTCCTaGATCGGGACTCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: IFLYGVSPLCMIIQESPRRRSLS*IGTPSL
Trigger: CAAGGAAGGAGTCCCGATCAAGGACAGGGATCTGCG...TCTTGGTGATTCCTGGATGATCATACACAGAGGACTTACACCATACAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS-3UTR CAA 90 bp TGTGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACAAGATACTGAAGATTTGATTAGATTCGGGATGTaGGGTCCCCAGCTTGGGATA +
Preference number: 5 (lower is better)
Translates to: CDREREREREREQDTEDLIRFGM*GPQLGI
Trigger: TATCCCAAGCTGGGGACCCAACATCCCGAATCTAAT...CAAATCTTCAGTATCTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGTTATTCACATCCGTCTaGACTTCACCATCAAAAGTC +
Preference number: 5 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMLFTSV*TSPSKV
Trigger: GACTTTTGATGGTGAAGTCAAGACGGATGTGAATAA...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GAAACAACGTGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGATAAACGCTGAGAATTaGGCAAACACGTCATTTCCT +
Preference number: 5 (lower is better)
Translates to: ETTWTRVTCARPNLQKRMINAEN*ANTSFP
Trigger: AGGAAATGACGTGTTTGCCAAATTCTCAGCGTTTAT...CATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp AATGAGCTTTATAGCATCAAACACATACCACAACCAACTCTACAAGGAGGGTTTAAGGGCAGAGAAGTATaGCTATCCCCACACGATACC +
Preference number: 5 (lower is better)
Translates to: NELYSIKHIPQPTLQGGFKGREV*LSPHDT
Trigger: GGTATCGTGTGGGGATAGCAATACTTCTCTGCCCTT...AAACCCTCCTTGTAGAGTTGGTTGTGGTATGTGTTTGATGCTATAAAGCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp TGGACAAGGGTGACATGTGCTAGACCCAATCTCCAAAAACGTATGGTTGACAAATTAATAATATGGAGCTaGGGTAAGAGGTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: WTRVTCARPNLQKRMVDKLIIWS*GKRLQS
Trigger: TGACTGCAACCTCTTACCCAAGCTCCATATTATTAA...TTTGTCAACCATACGTTTTTGGAGATTGGGTCTAGCACATGTCACCCTTGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS-3UTR CAA 90 bp GTCCCTAGAGCAGGTGTACACATTAAAAATGAGCTTTATAGCATCAAACACATAAAGGGCAGAGAAGTATaGCTATCCCCACACGATACC +
Preference number: 5 (lower is better)
Translates to: VPRAGVHIKNELYSIKHIKGREV*LSPHDT
Trigger: GGTATCGTGTGGGGATAGCAATACTTCTCTGCCCTT...TATGTGTTTGATGCTATAAAGCTCATTTTTAATGTGTACACCTGCTCTAGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS TCA 72 bp TACCCTCGGCGGGGCCCTCCTCGGCCAGGTGGTTGCTaGGCTGGGCCTCAGGCTCCGCGGCGCCCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: YPRRGPPRPGGC*AGPQAPRRPWR
Trigger: CCTCCAGGGGCGCCGCGGAGCCTGAGGCCCAGCTCAGCAACCACCTGGCCGAGGAGGGCCCCGCCGAGGGTA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 72 bp TCGGCCTGGGGCGAGAGGCTGCCGTCCCCCGATTGCTaGGGCTCACCCGAGACCCGGCGCGCCCTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: SAWGERLPSPDC*GSPETRRALPA
Trigger: GGCAGGAAGGGCGCGCCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 72 bp GCCTCGGCCTGGGGCGAGAGGCTGCCGTCCCCCGATTaGTGCGGCTCACCCGAGACCCGGCGCGCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: ASAWGERLPSPD*CGSPETRRALP
Trigger: AGGAAGGGCGCGCCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS CAA 72 bp TGCCTCGGCCTGGGGCGAGAGGCTGCCGTCCCCCGATaGCTGCGGCTCACCCGAGACCCGGCGCGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: CLGLGREAAVPR*LRLTRDPARPS
Trigger: GGAAGGGCGCGCCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 72 bp CCTTCCGGGACCTCAGGCCTCTGCTCCGCCTCCTCCTaGCTCTCGGGGGCCGCAGAGTCCTCGGGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: PSGTSGLCSASS*LSGAAESSGSL
Trigger: GAGGGAGCCCGAGGACTCTGCGGCCCCCGAGAGGCAGGAGGAGGCGGAGCAGAGGCCTGAGGTCCCGGAAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 72 bp CGGGCCGCGGAGGTGCAGTGCACGGCTGGAGAGGGCTaGTTCGCTCCTGCGCCTTTGGAAGTGCCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: RAAEVQCTAGEG*FAPAPLEVPGP
Trigger: CGGGCCGGGCACTTCCAAAGGCGCAGGAGCGAAGCAGCCCTCTCCAGCCGTGCACTGCACCTCCGCGGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 90 bp GACCTCAATTGCCTCGGCCTGGGGCGAGAGGCTGCCGTCCCCCGATaGCTGCGGCTCACCCGAGACCCGGCGCGCCCTTCCTGCCGGACC +
Preference number: 6 (lower is better)
Translates to: DLNCLGLGREAAVPR*LRLTRDPARPSCRT
Trigger: GGTCCGGCAGGAAGGGCGCGCCGGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGAGGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS GCA 72 bp TGGCGCTGGGCAAGGGGCGTGCTACGGGGCCCTCTGTaGTCCTTGAAGGACGCCGGCTCCGGGATCCTGCGG +
Preference number: 6 (lower is better)
Translates to: WRWARGVLRGPL*SLKDAGSGILR
Trigger: CCGCAGGATCCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CCA 72 bp GCACTCTCCCCGGCTGCGACCTCAATTGCCTCGGCCTaGGGCGAGAGGCTGCCGTCCCCCGATTGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: ALSPAATSIASA*GERLPSPDCCG
Trigger: GCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGAGGTCGCAGCCGGGGAGAGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS CCA 72 bp CCGGGGCAACCCCCTCCGGCTCCGCGGCCTCGGCCATaGCCGCAGATCCCTGTCCTTGATCGGGACTCCTTC +
Preference number: 6 (lower is better)
Translates to: PGQPPPAPRPRP*PQIPVLDRDSF
Trigger: GAAGGAGTCCCGATCAAGGACAGGGATCTGCGGCCATGGCCGAGGCCGCGGAGCCGGAGGGGGTTGCCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS GCA 72 bp CTGCGACCTCAATTGCCTCGGCCTGGGGCGAGAGGCTaGCGTCCCCCGATTGCTGCGGCTCACCCGAGACCC +
Preference number: 6 (lower is better)
Translates to: LRPQLPRPGARG*RPPIAAAHPRP
Trigger: GGGTCTCGGGTGAGCCGCAGCAATCGGGGGACGGCAGCCTCTCGCCCCAGGCCGAGGCAATTGAGGTCGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS CCA 72 bp GCACGGCTGGAGAGGGCTGCTTCGCTCCTGCGCCTTTaGAAGTGCCCGGCCCGCTGTCCGCTGTCCTGGGGT +
Preference number: 6 (lower is better)
Translates to: ARLERAASLLRL*KCPARCPLSWG
Trigger: ACCCCAGGACAGCGGACAGCGGGCCGGGCACTTCCAAAGGCGCAGGAGCGAAGCAGCCCTCTCCAGCCGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 72 bp TGCACGGCTGGAGAGGGCTGCTTCGCTCCTGCGCCTTaGGAAGTGCCCGGCCCGCTGTCCGCTGTCCTGGGG +
Preference number: 6 (lower is better)
Translates to: CTAGEGCFAPAP*EVPGPLSAVLG
Trigger: CCCCAGGACAGCGGACAGCGGGCCGGGCACTTCCAAAGGCGCAGGAGCGAAGCAGCCCTCTCCAGCCGTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 90 bp CGGTGGCGCTGGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCCTaGAAGGACGCCGGCTCCGGGATCCTGCGGCAAAGGTTTAGCCGG +
Preference number: 6 (lower is better)
Translates to: RWRWARGVLRGPLCS*KDAGSGILRQRFSR
Trigger: CCGGCTAAACCTTTGCCGCAGGATCCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 90 bp CCCCTCCGGCTCCGCGGCCTCGGCCATGGCCGCAGATCCCTGTCCTaGATCGGGACTCCTTCCTTGACGCTGCTTAAGGGTCGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: PLRLRGLGHGRRSLS*IGTPSLTLLKGRWR
Trigger: GCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGATCAAGGACAGGGATCTGCGGCCATGGCCGAGGCCGCGGAGCCGGAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS TCA 72 bp GGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCCTTaGAGGACGCCGGCTCCGGGATCCTGCGGCAAAGGT +
Preference number: 6 (lower is better)
Translates to: GQGACYGALCAP*RTPAPGSCGKG
Trigger: ACCTTTGCCGCAGGATCCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS GCA 72 bp TCCTCCACTGCTGGAGCTTCTCCCCGATTGCGCGTCTaGTTCCCACCGGGACCCCAATCTCGCCCGCGGGCC +
Preference number: 6 (lower is better)
Translates to: SSTAGASPRLRV*FPPGPQSRPRA
Trigger: GGCCCGCGGGCGAGATTGGGGTCCCGGTGGGAAGCAGACGCGCAATCGGGGAGAAGCTCCAGCAGTGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS GCA 72 bp TCCTGCGGCAAAGGTTTAGCCGGGGCACTGGGGCCTTaGGCAGGACCCGCAGGGCAAACTCCGCTTGGCCCC +
Preference number: 6 (lower is better)
Translates to: SCGKGLAGALGP*AGPAGQTPLGP
Trigger: GGGGCCAAGCGGAGTTTGCCCTGCGGGTCCTGCGCAAGGCCCCAGTGCCCCGGCTAAACCTTTGCCGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 72 bp TGGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCCTaGAAGGACGCCGGCTCCGGGATCCTGCGGCAAAGG +
Preference number: 6 (lower is better)
Translates to: WARGVLRGPLCS*KDAGSGILRQR
Trigger: CCTTTGCCGCAGGATCCCGGAGCCGGCGTCCTTCAAGGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 72 bp ATCCTGCGGCAAAGGTTTAGCCGGGGCACTGGGGCCTaGCGCAGGACCCGCAGGGCAAACTCCGCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: ILRQRFSRGTGA*RRTRRANSAWP
Trigger: GGGCCAAGCGGAGTTTGCCCTGCGGGTCCTGCGCAAGGCCCCAGTGCCCCGGCTAAACCTTTGCCGCAGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CCA 72 bp ACTCCTTCCTTGACGCTGCTTAAGGGTCGGTGGCGCTaGGCAAGGGGCGTGCTACGGGGCCCTCTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: TPSLTLLKGRWR*ARGVLRGPLCS
Trigger: GGAGCACAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CCA 72 bp ATCGGGACTCCTTCCTTGACGCTGCTTAAGGGTCGGTaGCGCTGGGCAAGGGGCGTGCTACGGGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: IGTPSLTLLKGR*RWARGVLRGPL
Trigger: CAGAGGGCCCCGTAGCACGCCCCTTGCCCAGCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 90 bp CTCGGCCATGGCCGCAGATCCCTGTCCTTGATCGGGACTCCTTCCTaGACGCTGCTTAAGGGTCGGTGGCGCTGGGCAAGGGGCGTGCTA +
Preference number: 6 (lower is better)
Translates to: LGHGRRSLSLIGTPS*TLLKGRWRWARGVL
Trigger: TAGCACGCCCCTTGCCCAGCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGATCAAGGACAGGGATCTGCGGCCATGGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 72 bp CTGGACTCTTCCTCCACTGCTGGAGCTTCTCCCCGATaGCGCGTCTGCTTCCCACCGGGACCCCAATCTCGC +
Preference number: 6 (lower is better)
Translates to: LDSSSTAGASPR*RVCFPPGPQSR
Trigger: GCGAGATTGGGGTCCCGGTGGGAAGCAGACGCGCAATCGGGGAGAAGCTCCAGCAGTGGAGGAAGAGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 72 bp GGCCGCAGATCCCTGTCCTTGATCGGGACTCCTTCCTaGACGCTGCTTAAGGGTCGGTGGCGCTGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: GRRSLSLIGTPS*TLLKGRWRWAR
Trigger: CCTTGCCCAGCGCCACCGACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGATCAAGGACAGGGATCTGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS CAA 72 bp CTCCGCGGCCTCGGCCATGGCCGCAGATCCCTGTCCTaGATCGGGACTCCTTCCTTGACGCTGCTTAAGGGT +
Preference number: 6 (lower is better)
Translates to: LRGLGHGRRSLS*IGTPSLTLLKG
Trigger: ACCCTTAAGCAGCGTCAAGGAAGGAGTCCCGATCAAGGACAGGGATCTGCGGCCATGGCCGAGGCCGCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349499.3
CDS GCA 72 bp GTCATGAAAGGAGGGTTTGTTCCGGGAGCCAGGTTCTaGAGGTCTGCGGGTTTCCTTTTCAGGTCCACTGTG +
Preference number: 6 (lower is better)
Translates to: VMKGGFVPGARF*RSAGFLFRSTV
Trigger: CACAGTGGACCTGAAAAGGAAACCCGCAGACCTGCAGAACCTGGCTCCCGGAACAAACCCTCCTTTCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS CCA 72 bp AACACGTCATTTCCTGCGGAATTAGATTCGGGATGTTaGGTCCCCAGCTTGGGATACCTCGGGGGAGCTAAT +
Preference number: 6 (lower is better)
Translates to: NTSFPAELDSGC*VPSLGYLGGAN
Trigger: ATTAGCTCCCCCGAGGTATCCCAAGCTGGGGACCCAACATCCCGAATCTAATTCCGCAGGAAATGACGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349499.3
ENST00000360731.7
CDS CAA 72 bp GCAATGCGAGAACAGCCTAATGCAGTAAGTTTTACCTaGACGAAGAGGGTGATGTCGTGCTCCTGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: AMREQPNAVSFT*TKRVMSCSCPR
Trigger: CCTGGGGCAGGAGCACGACATCACCCTCTTCGTCAAGGTAAAACTTACTGCATTAGGCTGTTCTCGCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360731.7