Pregenerated sensors for CLIC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000169583Ensembl transcript IDs: ENST00000473911.1, ENST00000480181.1, ENST00000494426.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGCGGCGACAGACGCGGGGTaGGGCGCTAGCGGGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TLTPDKDAFIGRQTRGGAATDAG*GASGGA Trigger: TGCACCCCCGCTAGCGCCCCACCCCGCGTCTGTCGC...CGCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | AGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGCAGCTCCGCGGGGATaGGCGCCTGGCGGAAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: RTPSLPTKMPLLGDRRGVAAPRG*APGGSA Trigger: CGCACTTCCGCCAGGCGCCCATCCCCGCGGAGCTGC...CACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR TCA 90 bp | TCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGCAGGAGGGGCAGTaGCCCACGCTCTCCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SGHPHSRQRCLYWATDAGWQEGQ*PTLSPS Trigger: GGACGGGGAGAGCGTGGGTCACTGCCCCTCCTGCCA...CCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | ACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGAGCAGGATGGGCAGCTaGGAGCCGGGGGCGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TPSLPTKMPLLGDRRGVGSRMGS*EPGAKS Trigger: GGACTTCGCCCCCGGCTCGCAGCTGCCCATCCTGCT...CCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | TGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGCGGGGATGGGCGCCTaGCGGAAGTGCGCGCACACC | + |
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Preference number: 4 (lower is better) Translates to: CQDTLTPDKDAFIGRQTRAGMGA*RKCAHT Trigger: GGTGTGCGCGCACTTCCGCCAGGCGCCCATCCCCGC...CCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | AGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGTGGTCTCCGCCATGGTaGGAGCTGCCGCGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RTPSLPTKMPLLGDRRGVWSPPW*ELPRSG Trigger: GCCTGACCGCGGCAGCTCCCACCATGGCGGAGACCA...CACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | ATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGCGCCTGGCGGAAGTaGGCGCACACCGTGTCGACG | + |
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Preference number: 4 (lower is better) Translates to: MSGHPHSRQRCLYWATDAGAWRK*AHTVST Trigger: CGTCGACACGGTGTGCGCGCACTTCCGCCAGGCGCC...CGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | AGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGCGCGCAGCAGCTGCTaGTACAGGGCTTCGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RTPSLPTKMPLLGDRRGVARSSC*YRASSC Trigger: GCAGGACGAAGCCCTGTACCAGCAGCTGCTGCGCGC...CACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR TCA 90 bp | ACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGCGCGTCCTCACTCGCCTTaGCAAACAGCTGGAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TLTPDKDAFIGRQTRGGARPHSP*QTAGAW Trigger: CCAAGCTCCAGCTGTTTGTCAAGGCGAGTGAGGACG...CGCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | CACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGCTGTGGAAAACGTCGTTaGCGGCGGTGTTGGACTCCC | + |
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Preference number: 4 (lower is better) Translates to: HPHSRQRCLYWATDAGWGCGKRR*RRCWTP Trigger: GGGAGTCCAACACCGCCGGCAACGACGTTTTCCACA...GCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | TTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGAACGAGGCGCCAGGCTaGGGAAGTCGGGCGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: FRCQDTLTPDKDAFIGRQNEAPG*GSRAAP Trigger: TGGGGCCGCCCGACTTCCCCAGCCTGGCGCCTCGTT...CTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | ACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGCGAACGCGGAGAACTTGTaGAAAACGTCGTTGCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: TLTPDKDAFIGRQTRGGANAENL*KTSLPA Trigger: CGCCGGCAACGACGTTTTCCACAAGTTCTCCGCGTT...CGCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | CCTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACGGTAGCTGTCCAGCCTaGCGAGGGCGCGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSDVRTPSLPTKMPLLGDGSCPA*RGRAAA Trigger: AGCTGCTGCGCGCCCTCGCCAGGCTGGACAGCTACC...GTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | CACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGCCAAAGATGCCTTTATTaGGCGACAGACGCGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HPHSRQRCLYWATDAGWGQRCLY*ATDAGW Trigger: CCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTG...GCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR TCA 90 bp | TCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGATGCAGTCGGCCAGCGTaGGCCTGTCGCCGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SDVRTPSLPTKMPLLGDRCSRPA*ACRRPG Trigger: TCCTGGACGGCGACAGGCTCACGCTGGCCGACTGCA...TCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | ATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGTACAGGGCTTCGTCCTaGGCGGGCACCGGGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: MSGHPHSRQRCLYWATDAYRASS*AGTGFL Trigger: CAAGAACCCGGTGCCCGCGCAGGACGAAGCCCTGTA...CGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | AGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGGCTTGGTCTCCGCCATaGTGGGAGCTGCCGCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: RCQDTLTPDKDAFIGRQTAWSPP*WELPRS Trigger: TGACCGCGGCAGCTCCCACCATGGCGGAGACCAAGC...CGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGATGTCATAGAGCAGGATaGGCAGCTGCGAGCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PFRCQDTLTPDKDAFIGRCHRAG*AAASRG Trigger: CCCCCGGCTCGCAGCTGCCCATCCTGCTCTATGACA...TCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | GTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGCAGCGTGTCTGTCTTaGCGTCGCTGTCATAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRTPSLPTKMPLLGDRRGAACLS*RRCHRA Trigger: TGCTCTATGACAGCGACGCCAAGACAGACACGCTGC...CCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | CCCTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACGACGATGTGCAGCTTaGGCAGGAGGCTGCAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: PFRCQDTLTPDKDAFIGRRRCAA*AGGCSR Trigger: CCGACTGCAGCCTCCTGCCCAAGCTGCACATCGTCG...TCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | CAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACACCGTGTCGACGATGTaGAGCTTGGGCAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QMSGHPHSRQRCLYWATDTVSTM*SLGRRL Trigger: CAGCCTCCTGCCCAAGCTGCACATCGTCGACACGGT...GTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | CTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACACGTTGCCGGCGGTGTTaGACTCCCTGTAACGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LQMSGHPHSRQRCLYWATRCRRC*TPCNEA Trigger: CGCCTCGTTACAGGGAGTCCAACACCGCCGGCAACG...TGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | TGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGAGAAAGTCCTCGATCTaGAGCGTGTCTGTCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: CQDTLTPDKDAFIGRQTRRKSSI*SVSVLA Trigger: CGCCAAGACAGACACGCTGCAGATCGAGGACTTTCT...CCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | CAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTCACTCCCGACAAAGATaGCTTTATTGGGCGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: QDTLTPDKDAFIGRQTRGHSRQR*LYWATD Trigger: GTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTG...ACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR GCA 90 bp | GCCCTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGAGGATCTCGGCGCTGTaGGGACACGTGTATTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: ALQMSGHPHSRQRCLYWARISAL*GHVYLN Trigger: GTTCAAATACACGTGTCCGCACAGCGCCGAGATCCT...CGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | TCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACAAACAGCTGGAGCTTaGTCTCCGCCATGGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SDVRTPSLPTKMPLLGDRQTAGA*SPPWWE Trigger: CTCCCACCATGGCGGAGACCAAGCTCCAGCTGTTTG...TCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CCA 90 bp | CCTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACGCCTTGACAAACAGCTaGAGCTTGGTCTCCGCCATG | + |
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Preference number: 4 (lower is better) Translates to: PSDVRTPSLPTKMPLLGDALTNS*SLVSAM Trigger: CATGGCGGAGACCAAGCTCCAGCTGTTTGTCAAGGC...GTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR TCA 90 bp | GATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGCGGACACGTGTATTTaGACTCTTTCTCCTGCATCG | + |
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Preference number: 4 (lower is better) Translates to: DVRTPSLPTKMPLLGDRRADTCI*TLSPAS Trigger: CGATGCAGGAGAAAGAGTTCAAATACACGTGTCCGC...GCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS TCA 90 bp | GCGCGCAGCAGCTGCTGGTACAGGGCTAGGGGGCAGGCGGCGCGGTaGGGACCAGGCCCAGGGCGCCCTCCCGCCTGGGCACCCGACCCC | + |
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Preference number: 5 (lower is better) Translates to: ARSSCWYRARGQAAR*GPGPGRPPAWAPDP Trigger: GGGGTCGGGTGCCCAGGCGGGAGGGCGCCCTGGGCCTGGTCCTCACCGCGCCGCCTGCCCCCTAGCCCTGTACCAGCAGCTGCTGCGCGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480181.1 |
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| CDS CCA 90 bp | CCGCCAGCTCGTGCTCCAGGGGCGCGCGCAGGTAGCTGTCCAGCCTaGCGAGGGCGCGCAGCAGCTGCTGGTACAGGGCTAGGGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PPARAPGARAGSCPA*RGRAAAAGTGLGGR Trigger: CCTGCCCCCTAGCCCTGTACCAGCAGCTGCTGCGCGCCCTCGCCAGGCTGGACAGCTACCTGCGCGCGCCCCTGGAGCACGAGCTGGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480181.1 |
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| CDS CCA 90 bp | CCGCCAGCTCGTGCTCCAGGGGCGCGCGCAGGTAGCTGTCCAGCCTaGCGAGGGCGCGCAGCAGCTGCTGGTACAGGGCTTCGTCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: PPARAPGARAGSCPA*RGRAAAAGTGLRPA Trigger: CGCAGGACGAAGCCCTGTACCAGCAGCTGCTGCGCGCCCTCGCCAGGCTGGACAGCTACCTGCGCGCGCCCCTGGAGCACGAGCTGGCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000473911.1 ENST00000494426.2 |
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| CDS CCA 90 bp | TCGCGCTGTCCAGGTAGCGGCGTACGCCGCGCAGCTCCGCGGGGATaGGCGCCTGGCGGAAGTGCGCGCACACCGTGTCGACGATGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SRCPGSGVRRAAPRG*APGGSARTPCRRCA Trigger: TGCACATCGTCGACACGGTGTGCGCGCACTTCCGCCAGGCGCCCATCCCCGCGGAGCTGCGCGGCGTACGCCGCTACCTGGACAGCGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS TCA 90 bp | TGTCGACGATGTGCAGCTTGGGCAGGAGGCTGCAGTCGGCCAGCGTaGGCCTGTCGCCGTCCAGGAAGCGGCGGCGGGACTCGCGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: CRRCAAWAGGCSRPA*ACRRPGSGGGTRAA Trigger: AGCTGCGCGAGTCCCGCCGCCGCTTCCTGGACGGCGACAGGCTCACGCTGGCCGACTGCAGCCTCCTGCCCAAGCTGCACATCGTCGACA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CCA 90 bp | CCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTaGGGCGCTAGCGGGGGTGCACGGCGGGCCGGTAGGCCGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: PHSRQRCLYWATDAG*GASGGARRAGRPPG Trigger: TCCTGGCGGCCTACCGGCCCGCCGTGCACCCCCGCTAGCGCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS CCA 90 bp | CGATCTGCAGCGTGTCTGTCTTGGCGTCGCTGTCATAGAGCAGGATaGGCAGCTGCGAGCCGGGGGCGAAGTCCTTCAGCACGTCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RSAACLSWRRCHRAG*AAASRGRSPSARPG Trigger: CCCCGGACGTGCTGAAGGACTTCGCCCCCGGCTCGCAGCTGCCCATCCTGCTCTATGACAGCGACGCCAAGACAGACACGCTGCAGATCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS TCA 90 bp | CCCTTGAGGAGCAGGACCATGAAGAGCCGCTGGCAGGAGGGGCAGTaGCCCACGCTCTCCCCGTCCTCACTCGCCTTGACAAACAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLRSRTMKSRWQEGQ*PTLSPSSLALTNSW Trigger: CCAGCTGTTTGTCAAGGCGAGTGAGGACGGGGAGAGCGTGGGTCACTGCCCCTCCTGCCAGCGGCTCTTCATGGTCCTGCTCCTCAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000473911.1 ENST00000494426.2 |
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| CDS TCA 90 bp | GCCGGTAGGCCGCCAGGATCTCGGCGCTGTGCGGACACGTGTATTTaGACTCTTTCTCCTGCATCGCGCTGTCCAGGTAGCGGCGTACGC | + |
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Preference number: 5 (lower is better) Translates to: AGRPPGSRRCADTCI*TLSPASRCPGSGVR Trigger: GCGTACGCCGCTACCTGGACAGCGCGATGCAGGAGAAAGAGTTCAAATACACGTGTCCGCACAGCGCCGAGATCCTGGCGGCCTACCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000480181.1 ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | CACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGCGCGGGCACCGGGTTCTaGATGAACGCGGAGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: HPHSRQRCLYWATDAGWGAGTGF*MNAENL Trigger: CAAGTTCTCCGCGTTCATCAAGAACCCGGTGCCCGC...GCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | ACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGGTCGACGATGTGCAGCTaGGGCAGGAGGCTGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: TPSLPTKMPLLGDRRGVGSTMCS*GRRLQS Trigger: CGACTGCAGCCTCCTGCCCAAGCTGCACATCGTCGA...CCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | GACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGTTGTGGAAAACGTCGTaGCCGGCGGTGTTGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: DTLTPDKDAFIGRQTRGGLWKTS*PAVLDS Trigger: GGAGTCCAACACCGCCGGCAACGACGTTTTCCACAA...CCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | GACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTGGGCCGTCCTCACTCGCCTaGACAAACAGCTGGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: DTLTPDKDAFIGRQTRGGPSSLA*TNSWSL Trigger: CAAGCTCCAGCTGTTTGTCAAGGCGAGTGAGGACGG...CCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | GTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGGGACAAAGATGCCTTTATaGGGCGACAGACGCGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VRTPSLPTKMPLLGDRRGTKMPL*GDRRGV Trigger: CACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGT...CCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | AGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGGTGAAAGGTACGCCCTaGAGGAGCAGGACCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: RCQDTLTPDKDAFIGRQTVKGTP*RSRTMK Trigger: CTTCATGGTCCTGCTCCTCAAGGGCGTACCTTTCAC...CGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | ATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGACAGACGCGATGAACGCGGAGAACTaGTGGAAAACGTCGTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: MSGHPHSRQRCLYWATDAMNAEN*WKTSLP Trigger: CGGCAACGACGTTTTCCACAAGTTCTCCGCGTTCAT...CGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS-3UTR CAA 90 bp | CCCTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATGCCTTTATTGGGCGATGCGGACACGTGTATTaGAACTCTTTCTCCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: PFRCQDTLTPDKDAFIGRCGHVY*NSFSCI Trigger: GATGCAGGAGAAAGAGTTCAAATACACGTGTCCGCA...TCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS GCA 72 bp | TCGCCGTCCAGGAAGCGGCGGCGGGACTCGCGCAGCTaGGGCTCCCCCGCCAGCTCGTGCTCCAGGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: SPSRKRRRDSRS*GSPASSCSRGA Trigger: CGCGCCCCTGGAGCACGAGCTGGCGGGGGAGCCGCAGCTGCGCGAGTCCCGCCGCCGCTTCCTGGACGGCGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CCA 72 bp | CGGCGTACGCCGCGCAGCTCCGCGGGGATGGGCGCCTaGCGGAAGTGCGCGCACACCGTGTCGACGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: RRTPRSSAGMGA*RKCAHTVSTMC Trigger: GCACATCGTCGACACGGTGTGCGCGCACTTCCGCCAGGCGCCCATCCCCGCGGAGCTGCGCGGCGTACGCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CCA 72 bp | CCAGGTAGCGGCGTACGCCGCGCAGCTCCGCGGGGATaGGCGCCTGGCGGAAGTGCGCGCACACCGTGTCGA | + |
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Preference number: 6 (lower is better) Translates to: PGSGVRRAAPRG*APGGSARTPCR Trigger: TCGACACGGTGTGCGCGCACTTCCGCCAGGCGCCCATCCCCGCGGAGCTGCGCGGCGTACGCCGCTACCTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS GCA 72 bp | CCGCGCAGCTCCGCGGGGATGGGCGCCTGGCGGAAGTaGGCGCACACCGTGTCGACGATGTGCAGCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PRSSAGMGAWRK*AHTVSTMCSLG Trigger: GCCCAAGCTGCACATCGTCGACACGGTGTGCGCGCACTTCCGCCAGGCGCCCATCCCCGCGGAGCTGCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS TCA 72 bp | TGTGCAGCTTGGGCAGGAGGCTGCAGTCGGCCAGCGTaGGCCTGTCGCCGTCCAGGAAGCGGCGGCGGGACT | + |
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Preference number: 6 (lower is better) Translates to: CAAWAGGCSRPA*ACRRPGSGGGT Trigger: AGTCCCGCCGCCGCTTCCTGGACGGCGACAGGCTCACGCTGGCCGACTGCAGCCTCCTGCCCAAGCTGCACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CCA 72 bp | CGACAAAGATGCCTTTATTGGGCGACAGACGCGGGGTaGGGCGCTAGCGGGGGTGCACGGCGGGCCGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: RQRCLYWATDAG*GASGGARRAGR Trigger: CCTACCGGCCCGCCGTGCACCCCCGCTAGCGCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000480181.1 ENST00000494426.2 |
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| CDS GCA 72 bp | GGCACCCGACCCCCTGACCCCGCTTCACCTTCGTCCTaGGCGGGCACCGGGTTCTTGATGAACGCGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: GTRPPDPASPSS*AGTGFLMNAEN Trigger: GTTCTCCGCGTTCATCAAGAACCCGGTGCCCGCGCAGGACGAAGGTGAAGCGGGGTCAGGGGGTCGGGTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000480181.1 |
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| CDS CAA 72 bp | CGGAAGTGCGCGCACACCGTGTCGACGATGTGCAGCTaGGGCAGGAGGCTGCAGTCGGCCAGCGTGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: RKCAHTVSTMCS*GRRLQSASVSL Trigger: CAGGCTCACGCTGGCCGACTGCAGCCTCCTGCCCAAGCTGCACATCGTCGACACGGTGTGCGCGCACTTCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CCA 72 bp | GCGTGTCTGTCTTGGCGTCGCTGTCATAGAGCAGGATaGGCAGCTGCGAGCCGGGGGCGAAGTCCTTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ACLSWRRCHRAG*AAASRGRSPSA Trigger: TGCTGAAGGACTTCGCCCCCGGCTCGCAGCTGCCCATCCTGCTCTATGACAGCGACGCCAAGACAGACACGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CAA 72 bp | CGCGTGTCCACCGTGGTGAGGGTGAAAGGTACGCCCTaGAGGAGCAGGACCATGAAGAGCCGCTGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RVSTVVRVKGTP*RSRTMKSRWQE Trigger: CTCCTGCCAGCGGCTCTTCATGGTCCTGCTCCTCAAGGGCGTACCTTTCACCCTCACCACGGTGGACACGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CAA 90 bp | AGCAGCTGCTGGTACAGGGCTTCGTCCTGCGCGGGCACCGGGTTCTaGATGAACGCGGAGAACTTGTGGAAAACGTCGTTGCCGGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSCWYRASSCAGTGF*MNAENLWKTSLPAV Trigger: CACCGCCGGCAACGACGTTTTCCACAAGTTCTCCGCGTTCATCAAGAACCCGGTGCCCGCGCAGGACGAAGCCCTGTACCAGCAGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000473911.1 ENST00000494426.2 |
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| CDS CCA 72 bp | CGGAGAACTTGTGGAAAACGTCGTTGCCGGCGGTGTTaGACTCCCTGTAACGAGGCGCCAGGCTGGGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RRTCGKRRCRRC*TPCNEAPGWGS Trigger: ACTTCCCCAGCCTGGCGCCTCGTTACAGGGAGTCCAACACCGCCGGCAACGACGTTTTCCACAAGTTCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CCA 72 bp | GCGGGCACCGGGTTCTTGATGAACGCGGAGAACTTGTaGAAAACGTCGTTGCCGGCGGTGTTGGACTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGTGFLMNAENL*KTSLPAVLDSL Trigger: CAGGGAGTCCAACACCGCCGGCAACGACGTTTTCCACAAGTTCTCCGCGTTCATCAAGAACCCGGTGCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS CAA 72 bp | TGCGCGGGCACCGGGTTCTTGATGAACGCGGAGAACTaGTGGAAAACGTCGTTGCCGGCGGTGTTGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: CAGTGFLMNAEN*WKTSLPAVLDS Trigger: GGAGTCCAACACCGCCGGCAACGACGTTTTCCACAAGTTCTCCGCGTTCATCAAGAACCCGGTGCCCGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000473911.1 ENST00000480181.1 ENST00000494426.2 |
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| CDS TCA 72 bp | CCGCCAGGATCTCGGCGCTGTGCGGACACGTGTATTTaGACTCTTTCTCCTGCATCGCGCTGTCCAGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: PPGSRRCADTCI*TLSPASRCPGS Trigger: GCTACCTGGACAGCGCGATGCAGGAGAAAGAGTTCAAATACACGTGTCCGCACAGCGCCGAGATCCTGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000480181.1 ENST00000494426.2 |
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| CDS GCA 72 bp | CTTCAGATGTCAGGACACCCTCACTCCCGACAAAGATaGCTTTATTGGGCGACAGACGCGGGGTGGGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: LQMSGHPHSRQR*LYWATDAGWGA Trigger: AGCGCCCCACCCCGCGTCTGTCGCCCAATAAAGGCATCTTTGTCGGGAGTGAGGGTGTCCTGACATCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494426.2 |
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| CDS CAA 72 bp | CCCGCTTCACCTTCGTCCTGCGCGGGCACCGGGTTCTaGATGAACGCGGAGAACTTGTGGAAAACGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: PASPSSCAGTGF*MNAENLWKTSL Trigger: CAACGACGTTTTCCACAAGTTCTCCGCGTTCATCAAGAACCCGGTGCCCGCGCAGGACGAAGGTGAAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480181.1 |
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| CDS CAA 72 bp | TGGTACAGGGCTTCGTCCTGCGCGGGCACCGGGTTCTaGATGAACGCGGAGAACTTGTGGAAAACGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: WYRASSCAGTGF*MNAENLWKTSL Trigger: CAACGACGTTTTCCACAAGTTCTCCGCGTTCATCAAGAACCCGGTGCCCGCGCAGGACGAAGCCCTGTACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000473911.1 ENST00000494426.2 |
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