Pregenerated sensors for CLIC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000155962Ensembl transcript IDs: ENST00000321926.4, ENST00000369449.7, ENST00000465553.5, ENST00000491205.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GGTGAATGCCAAAATTTATTCTTCCTAGGTGTAACTTTATACCCATaGACCAACATCTTTCAGTGCCTCTGCCTTCTTTCTCTCCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: GECQNLFFLGVTLYP*TNIFQCLCLLSLPS Trigger: GCTAGGGAGAGAAAGAAGGCAGAGGCACTGAAAGATGTTGGTCAATGGGTATAAAGTTACACCTAGGAAGAATAAATTTTGGCATTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCATGTCATTCAGGATTaGAGTGGTTTGCCATACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SMVFKDSTLSLLIALLFFHVIQD*SGLPYR Trigger: TCTGTATGGCAAACCACTGCAATCCTGAATGACATG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTAAGAATTTGCCTCTCTaGTATGCTCACTCTCTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SMVFKDSTLSLLIALLFFKNLPL*YAHSLY Trigger: ATACAGAGAGTGAGCATATCAGAGAGGCAAATTCTT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTAGGATTGCAGTGGTTTaGCATACAGATAAAGAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SMVFKDSTLSLLIALLFFRIAVV*HTDKEN Trigger: ATTTTCTTTATCTGTATGGCAAACCACTGCAATCCT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTTTTGCCTCTCTGATATaGTCACTCTCTGTATTTATT | + |
|
Preference number: 2 (lower is better) Translates to: SMVFKDSTLSLLIALLFFFASLI*SLSVFI Trigger: AATAAATACAGAGAGTGAGCATATCAGAGAGGCAAA...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 34% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCATTCTTTAAGAATTTaGCTCTCTGATATGCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: SMVFKDSTLSLLIALLFFHSLRI*LSDMLT Trigger: AGTGAGCATATCAGAGAGGCAAATTCTTAAAGAATG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCCATGTCATTCAGGATaGCAGTGGTTTGCCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: SMVFKDSTLSLLIALLFFPCHSG*QWFAIQ Trigger: CTGTATGGCAAACCACTGCAATCCTGAATGACATGG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTATCACAAATATAGCCTaGTCTCCTGTAAGAGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SMVFKDSTLSLLIALLFFITNIA*SPVRAL Trigger: GAGAGCTCTTACAGGAGACAAGGCTATATTTGTGAT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTGCTTGTGTTTCTCTTTaGAGGGAGCAAGAGTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SMVFKDSTLSLLIALLFFACVSL*REQELS Trigger: ACTTAACTCTTGCTCCCTCAAAAGAGAAACACAAGC...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR TCA 72 bp | GCTACATTATTATTTGCTATAGTCACCCTACTGTGGTaGATGCCAAAATTTATTCTTCCTAGGTGTAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATLLFAIVTLLW*MPKFILPRCNF Trigger: AAAGTTACACCTAGGAAGAATAAATTTTGGCATTCACCACAGTAGGGTGACTATAGCAAATAATAATGTAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATCAGGGTCCACTTGAGTaGCGGGCCGCAGGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDQGPLE*RAAGLT Trigger: TGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTG...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTATCTCAGGGTCCACTTaGGTGCCGGGCCGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFISGST*VPGRRP Trigger: AGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGAT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTACTTGGGACTCAGGTaGGGGTACCTTGGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDYLGLR*GYLGGA Trigger: GGCTCCTCCAAGGTACCCTCACCTGAGTCCCAAGTA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATCCAGGAACGGAGGATTaGTACCTGGGGCTAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDPGTED*YLGLSP Trigger: AGGACTTAGCCCCAGGTACCAATCCTCCGTTCCTGG...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTGCCGGGCCGCAGGCCTaGCATCTTTGTCTTTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFAGPQA*HLCLYC Trigger: GCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGC...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATAAGACTCCTTGTACTTaGGACTCAGGTGAGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDKTPCT*DSGEGT Trigger: GGTACCCTCACCTGAGTCCCAAGTACAAGGAGTCTT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATATAACGCCAGACTCCTaGGAATTCTGCTGGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDITPDS*EFCWNV Trigger: GACATTCCAGCAGAATTCTCAGGAGTCTGGCGTTAT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATATCTTTCAGTGCCTCTaGCTTCTTTCTCTCCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDIFQCL*LLSLPS Trigger: GCTAGGGAGAGAAAGAAGGCAGAGGCACTGAAAGAT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTCTTCAGGACACGTGTaGGTAAATTCTTCACGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDSSGHV*VNSSRA Trigger: TGCCCGTGAAGAATTTACCCACACGTGTCCTGAAGA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTCAAGGACAGTACTTTaGGTTTGCTCATTGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDSRTVL*VCSLPY Trigger: GTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATCATGTCATTCAGGATTaGAGTGGTTTGCCATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDHVIQD*SGLPYR Trigger: TCTGTATGGCAAACCACTGCAATCCTGAATGACATG...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATAAGGGCAAAAGATTGTaGTGCTTTCCATGTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDKGKRL*CFPCHS Trigger: TGAATGACATGGAAAGCATCACAATCTTTTGCCCTT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATAAGAATTTGCCTCTCTaGTATGCTCACTCTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDKNLPL*YAHSLY Trigger: ATACAGAGAGTGAGCATATCAGAGAGGCAAATTCTT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATGTCACCCTACTGTGGTaGATGCCAAAATTTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDVTLLW*MPKFIL Trigger: AAGAATAAATTTTGGCATTCACCACAGTAGGGTGAC...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCATCTTTGTCTTTACTaGCAGTTGTCAGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFHLCLY*QLSASC Trigger: GCAGGAGGCTGACAACTGGCAGTAAAGACAAAGATG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCCAAGAATAGTCTTCTaGAAACTGGGGGTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFPRIVF*KLGVPQ Trigger: CTGAGGAACCCCCAGTTTCCAGAAGACTATTCTTGG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATGCATTGCATGTATTCTaGAATATACTGATGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDALHVF*NILMTG Trigger: TCCTGTCATCAGTATATTTCAGAATACATGCAATGC...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATGATTATCAACATGATTaGATTTCTCTGCCACCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDDYQHD*ISLPPN Trigger: GTTAGGTGGCAGAGAAATGCAATCATGTTGATAATC...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATCCCTACTGTGGTGAATaGCAAAATTTATTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDPYCGE*QNLFFL Trigger: TAGGAAGAATAAATTTTGGCATTCACCACAGTAGGG...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATAGGATTGCAGTGGTTTaGCATACAGATAAAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDRIAVV*HTDKEN Trigger: ATTTTCTTTATCTGTATGGCAAACCACTGCAATCCT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATCATTCTTTAAGAATTTaGCTCTCTGATATGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDHSLRI*LSDMLT Trigger: AGTGAGCATATCAGAGAGGCAAATTCTTAAAGAATG...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTGCTACATTATTATTTaGTATAGTCACCCTACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDCYIII*YSHPTV Trigger: CACAGTAGGGTGACTATAGCAAATAATAATGTAGCA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTATCATGAAAAGGCGTTaGCAAAAGGGACAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFIMKRR*QKGQFP Trigger: TGGAAACTGTCCCTTTTGCCAACGCCTTTTCATGAT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTGTTCTTCAGGCTTTCTaGTCATGTCAACAGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFVLQAF*SCQQLS Trigger: TGACAACTGTTGACATGACCAGAAAGCCTGAAGAAC...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATAACAAGAAGACCTTTTaGTCAGCCACAGTTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDNKKTF*SATVFI Trigger: AATAAAAACTGTGGCTGACCAAAAGGTCTTCTTGTT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTATGAGTGAGATCATGTaGTGTTTGTCTTTCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFMSEIM*CLSFCA Trigger: GGCACAGAAAGACAAACACCACATGATCTCACTCAT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR TCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCAAAGATTATCAACATaGTTGCATTTCTCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFQRLST*LHFSAT Trigger: GGTGGCAGAGAAATGCAATCATGTTGATAATCTTTG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR GCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTATGATTGCATTTCTCTaGCACCTAACCATACACTAT | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFMIAFL*HLTIHY Trigger: ATAGTGTATGGTTAGGTGGCAGAGAAATGCAATCAT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR CAA 72 bp | CTTGACTCTATGGTTTTCAAGGACAGTACTTTGAGTTaGCTCATTGCCTTACTTTTCTTTGAACCTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LDSMVFKDSTLS*LIALLFFEPIK Trigger: TTTAATAGGTTCAAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGAGTCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| 3UTR CAA 72 bp | ATTTATCTTGACTCTATGGTTTTCAAGGACAGTACTTaGAGTTTGCTCATTGCCTTACTTTTCTTTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: IYLDSMVFKDST*SLLIALLFFEP Trigger: AGGTTCAAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGAGTCAAGATAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CCA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTATATGGGATACAATGTaGTGTTTCAATGCATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SMVFKDSTLSLLIALLFFIWDTM*CFNACT Trigger: TGTACATGCATTGAAACACCACATTGTATCCCATAT...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS TCA 90 bp | AAAAAGCTCAATCTCAGGGTCCACTTGAGTGCCGGGCCGCAGGCCTaGCATCTTTGTCTTTACTGCCAGTTGTCAGCCTCCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKLNLRVHLSAGPQA*HLCLYCQLSASCLL Trigger: CAGGAGGCAGGAGGCTGACAACTGGCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTGAGCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS TCA 90 bp | CAACCTGTAGTCCCAGCTACTCAAGAGTGGGGTGGGAGGACTGCTTaGGCCTCAGAGGTGGGGGTTGCAATAAGCCTTGATCATGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QPVVPATQEWGGRTA*ASEVGVAISLDHAT Trigger: AGTGGCATGATCAAGGCTTATTGCAACCCCCACCTCTGAGGCTCAAGCAGTCCTCCCACCCCACTCTTGAGTAGCTGGGACTACAGGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465553.5 |
||
| CDS CCA 90 bp | TATTTCTTGGCAGCAACCTGTAGTCCCAGCTACTCAAGAGTGGGGTaGGAGGACTGCTTGAGCCTCAGAGGTGGGGGTTGCAATAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YFLAATCSPSYSRVG*EDCLSLRGGGCNKP Trigger: AGGCTTATTGCAACCCCCACCTCTGAGGCTCAAGCAGTCCTCCCACCCCACTCTTGAGTAGCTGGGACTACAGGTTGCTGCCAAGAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465553.5 |
||
| CDS TCA 90 bp | CCATCACTTCCAGCCTTTACAAAAAGCTCAATCTCAGGGTCCACTTaGGTGCCGGGCCGCAGGCCTGACATCTTTGTCTTTACTGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSLPAFTKSSISGST*VPGRRPDIFVFTAS Trigger: ACTGGCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTGAGCTTTTTGTAAAGGCTGGAAGTGATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS GCA 90 bp | CACTTCCAGCCTTTACAAAAAGCTCAATCTCAGGGTCCACTTGAGTaGCGGGCCGCAGGCCTGACATCTTTGTCTTTACTGCCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HFQPLQKAQSQGPLE*RAAGLTSLSLLPVV Trigger: GACAACTGGCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTGAGCTTTTTGTAAAGGCTGGAAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATAATCTCAGGGTCCACTaGAGTGCCGGGCCGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDNLRVH*SAGPQA Trigger: GGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS CCA 90 bp | CAGTTTCCAATACTCTCTCCATCACTTCCAGCAGTTCCACGTGGCTaGGAAGGCCTCACAATCATGGAAGAAGGTGAAAGGCACATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QFPILSPSLPAVPRG*EGLTIMEEGERHIF Trigger: AAAGATGTGCCTTTCACCTTCTTCCATGATTGTGAGGCCTTCCCAGCCACGTGGAACTGCTGGAAGTGATGGAGAGAGTATTGGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491205.1 |
||
| CDS CCA 90 bp | CATCACTTCCAGCAGTTCCACGTGGCTGGGAAGGCCTCACAATCATaGAAGAAGGTGAAAGGCACATCTTTACAAAAAGCTCAATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHFQQFHVAGKASQS*KKVKGTSLQKAQSQ Trigger: CTGAGATTGAGCTTTTTGTAAAGATGTGCCTTTCACCTTCTTCCATGATTGTGAGGCCTTCCCAGCCACGTGGAACTGCTGGAAGTGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491205.1 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATACCAGGAACGGAGGATaGGTACCTGGGGCTAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDTRNGG*VPGAKS Trigger: GGACTTAGCCCCAGGTACCAATCCTCCGTTCCTGGT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTGTCTTTACTGCCAGTaGTCAGCCTCCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDCLYCQ*SASCLL Trigger: CAGGAGGCAGGAGGCTGACAACTGGCAGTAAAGACA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTCAGGTGAGGGTACCTaGGAGGAGCCAGGGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDSGEGT*EEPGFV Trigger: AACAAACCCTGGCTCCTCCAAGGTACCCTCACCTGA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATCCATGTCATTCAGGATaGCAGTGGTTTGCCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDPCHSG*QWFAIQ Trigger: CTGTATGGCAAACCACTGCAATCCTGAATGACATGG...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATATGTATGCAGAAAACTaGGCAAAGAGGTTACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDMYAEN*AKRLQP Trigger: GGGCTGTAACCTCTTTGCCAAGTTTTCTGCATACAT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTGCAGGCCTGACATCTTaGTCTTTACTGCCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMVFKDSTLSLLIALLFFAGLTS*SLLPVV Trigger: GACAACTGGCAGTAAAGACAAAGATGTCAGGCCTGC...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATTCTGTTTTCAACTCCTaGTTATACACCAGGAACGGA | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDSVFNS*LYTRNG Trigger: TCCGTTCCTGGTGTATAACAAGGAGTTGAAAACAGA...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATATCACAAATATAGCCTaGTCTCCTGTAAGAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDITNIA*SPVRAL Trigger: GAGAGCTCTTACAGGAGACAAGGCTATATTTGTGAT...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTGATCATGAAAAGGCGTaGGCAAAAGGGACAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMVFKDSTLSLLIALLFFDHEKA*AKGTVS Trigger: GGAAACTGTCCCTTTTGCCAACGCCTTTTCATGATC...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | AAGATTGTGATGCTTTCCATGTCATTCAGGATTGCAGTGGTTTGCCATACAGATGTATTTTCAATTTCTTaGTCTTCAGGACACGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KIVMLSMSFRIAVVCHTDVFSIS*SSGHVW Trigger: CCACACGTGTCCTGAAGACAAAGAAATTGAAAATAC...ATCTGTATGGCAAACCACTGCAATCCTGAATGACATGGAAAGCATCACAATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTCAACAAGAAGACCTTTaGGTCAGCCACAGTTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: SMVFKDSTLSLLIALLFFQQEDL*VSHSFY Trigger: ATAAAAACTGTGGCTGACCAAAAGGTCTTCTTGTTG...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTGACAGTACTTTGAGTTaGCTCATTGCCTTACTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMVFKDSTLSLLIALLFFDSTLS*LIALLF Trigger: GAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTC...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS-3UTR CAA 90 bp | TCTATGGTTTTCAAGGACAGTACTTTGAGTTTGCTCATTGCCTTACTTTTCTTTTTCAAGGACAGTACTTaGAGTTTGCTCATTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SMVFKDSTLSLLIALLFFFKDST*SLLIAL Trigger: TAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAA...AAAGAAAAGTAAGGCAATGAGCAAACTCAAAGTACTGTCCTTGAAAACCATAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369449.7 |
||
| CDS CCA 72 bp | GCAGCAACCTGTAGTCCCAGCTACTCAAGAGTGGGGTaGGAGGACTGCTTGAGCCTCAGAGGTGGGGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AATCSPSYSRVG*EDCLSLRGGGC Trigger: GCAACCCCCACCTCTGAGGCTCAAGCAGTCCTCCCACCCCACTCTTGAGTAGCTGGGACTACAGGTTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000465553.5 |
||
| CDS CAA 72 bp | GGTCCACTTGAGTGCCGGGCCGCAGGCCTGACATCTTaGTCTTTACTGCCAGTTGTCAGCCTCCTGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLECRAAGLTS*SLLPVVSLLPP Trigger: AGGAGGCAGGAGGCTGACAACTGGCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS CAA 90 bp | CAATCTCAGGGTCCACTTGAGTGCCGGGCCGCAGGCCTGACATCTTaGTCTTTACTGCCAGTTGTCAGCCTCCTGCCTCCTGTAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSQGPLECRAAGLTS*SLLPVVSLLPPVES Trigger: GGACTCTACAGGAGGCAGGAGGCTGACAACTGGCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS TCA 72 bp | AATCTCAGGGTCCACTTGAGTGCCGGGCCGCAGGCCTaGCATCTTTGTCTTTACTGCCAGTTGTCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLRVHLSAGPQA*HLCLYCQLSAS Trigger: GGAGGCTGACAACTGGCAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS CCA 72 bp | GAAGACCGTCTAGCTTGTAGTGGACTGAGTCAGACCTaGAGCCAGTCTCTTCTCTCAAGAGGTGTGACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDRLACSGLSQT*SQSLLSRGVTQ Trigger: CTGCGTCACACCTCTTGAGAGAAGAGACTGGCTCCAGGTCTGACTCAGTCCACTACAAGCTAGACGGTCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000321926.4 ENST00000369449.7 |
||
| CDS TCA 72 bp | CCAGCCTTTACAAAAAGCTCAATCTCAGGGTCCACTTaGGTGCCGGGCCGCAGGCCTGACATCTTTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PAFTKSSISGST*VPGRRPDIFVF Trigger: AAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTGAGCTTTTTGTAAAGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS GCA 72 bp | CCTTTACAAAAAGCTCAATCTCAGGGTCCACTTGAGTaGCGGGCCGCAGGCCTGACATCTTTGTCTTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: PLQKAQSQGPLE*RAAGLTSLSLL Trigger: CAGTAAAGACAAAGATGTCAGGCCTGCGGCCCGGCACTCAAGTGGACCCTGAGATTGAGCTTTTTGTAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000321926.4 ENST00000369449.7 ENST00000465553.5 |
||
| CDS CCA 72 bp | ATACTCTCTCCATCACTTCCAGCAGTTCCACGTGGCTaGGAAGGCCTCACAATCATGGAAGAAGGTGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: ILSPSLPAVPRG*EGLTIMEEGER Trigger: CCTTTCACCTTCTTCCATGATTGTGAGGCCTTCCCAGCCACGTGGAACTGCTGGAAGTGATGGAGAGAGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491205.1 |
||
| CDS CCA 72 bp | CAGCAGTTCCACGTGGCTGGGAAGGCCTCACAATCATaGAAGAAGGTGAAAGGCACATCTTTACAAAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QQFHVAGKASQS*KKVKGTSLQKA Trigger: AGCTTTTTGTAAAGATGTGCCTTTCACCTTCTTCCATGATTGTGAGGCCTTCCCAGCCACGTGGAACTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491205.1 |
||
| CDS TCA 72 bp | ACGTGGCTGGGAAGGCCTCACAATCATGGAAGAAGGTaGAAGGCACATCTTTACAAAAAGCTCAATCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TWLGRPHNHGRR*KAHLYKKLNLR Trigger: CCTGAGATTGAGCTTTTTGTAAAGATGTGCCTTTCACCTTCTTCCATGATTGTGAGGCCTTCCCAGCCACGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000491205.1 |
||
| CDS CAA 90 bp | ATGAAGTCTGTTTTCAACTCCTTGTTATACACCAGGAACGGAGGATaGGTACCTGGGGCTAAGTCCTTTAGTTCTTCAGGCTTTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MKSVFNSLLYTRNGG*VPGAKSFSSSGFLV Trigger: GACCAGAAAGCCTGAAGAACTAAAGGACTTAGCCCCAGGTACCAATCCTCCGTTCCTGGTGTATAACAAGGAGTTGAAAACAGACTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369449.7 ENST00000465553.5 ENST00000491205.1 |
||
| CDS TCA 72 bp | ACGGGCATAGGCATTGTGGAGATAACGCCAGACTCCTaGGAATTCTGCTGGAATGTCAAAGTCACGATATTT | + |
|
Preference number: 6 (lower is better) Translates to: TGIGIVEITPDS*EFCWNVKVTIF Trigger: AAATATCGTGACTTTGACATTCCAGCAGAATTCTCAGGAGTCTGGCGTTATCTCCACAATGCCTATGCCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000369449.7 ENST00000465553.5 |
||
| CDS CAA 72 bp | GAGAATTCTGCTGGAATGTCAAAGTCACGATATTTCTaGGCAGCAACCTGTAGTCCCAGCTACTCAAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ENSAGMSKSRYF*AATCSPSYSRV Trigger: CACTCTTGAGTAGCTGGGACTACAGGTTGCTGCCAAGAAATATCGTGACTTTGACATTCCAGCAGAATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465553.5 |
||
| CDS GCA 72 bp | TCTTCTCTCAAGAGGTGTGACGCAGAAAATTCTAGATaGTTAAGTGCAGCTCTTGAAATCGTTTTCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSLKRCDAENSR*LSAALEIVFLL Trigger: AAGAAGGAAAACGATTTCAAGAGCTGCACTTAAGCATCTAGAATTTTCTGCGTCACACCTCTTGAGAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000321926.4 |
||