Pregenerated sensors for CLECL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000184293Ensembl transcript IDs: ENST00000327839.3, ENST00000540988.1, ENST00000542530.5, ENST00000621400.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCTGGAAATTGATTGTCTACTTCAGCCATCTCCTGGCGGCTGGTaGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATA | + |
|
Preference number: 1 (lower is better) Translates to: NLEIDCLLQPSPGGW*LPRTCPIPLAQAGI Trigger: TATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAATCAATTTCCAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CCA 90 bp | AATAACCTGGAAATTGATTGTCTACTTCAGCCATCTCCTGGCGGCTaGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: NNLEIDCLLQPSPGG*WLPRTCPIPLAQAG Trigger: CCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAATCAATTTCCAGGTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 90 bp | ATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTaGTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAG | + |
|
Preference number: 1 (lower is better) Translates to: ISWRLVAATNLSHSS*SSWDIKQELCSLHQ Trigger: CTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR GCA 90 bp | TGGAAATTGATTGTCTACTTCAGCCATCTCCTGGCGGCTGGTGGCTaGCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAA | + |
|
Preference number: 1 (lower is better) Translates to: WKLIVYFSHLLAAGG*HELVPFLLLKLGYQ Trigger: TTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAATCAATTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 90 bp | GACTTTCTTATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTCCTTaGTCCCCACATCTCCTTTCTGGCTCACTCTCACCACTGTGTTTC | + |
|
Preference number: 1 (lower is better) Translates to: DFLILVTRAFSAMSP*SPHLLSGSLSPLCF Trigger: GAAACACAGTGGTGAGAGTGAGCCAGAAAGGAGATGTGGGGAGCAAGGACTCATGGCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CCA 90 bp | CTTCATCAGAGGCCTCTTCCTAAGAAGACCCCAGAGACAGACATATaGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: LHQRPLPKKTPETDI*MPVASVSSALKSRN Trigger: GTTCCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTCTGGGGTCTTCTTAGGAAGAGGCCTCTGATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR CCA 90 bp | CGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTaGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: RLVAATNLSHSSCSS*DIKQELCSLHQRPL Trigger: AAGAGGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR TCA 90 bp | TGGCTCACTCTCACCACTGTGTTTCTGCCTTCCCAGCCCTTTGCATaGCTGAATTTCATGTTCTTGTGGGACTGTCTTCTGCCCTCACAA | + |
|
Preference number: 1 (lower is better) Translates to: WLTLTTVFLPSQPFA*LNFMFLWDCLLPSQ Trigger: TTGTGAGGGCAGAAGACAGTCCCACAAGAACATGAAATTCAGTCATGCAAAGGGCTGGGAAGGCAGAAACACAGTGGTGAGAGTGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 90 bp | TGTTCTTGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATaGTTTTCCTGGAGCAGGAAGGCCCAGGATCCTGTTCCTATATCT | + |
|
Preference number: 1 (lower is better) Translates to: CSCGTVFCPHNLPFP*FSWSRKAQDPVPIS Trigger: AGATATAGGAACAGGATCCTGGGCCTTCCTGCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 90 bp | ACTGAATTTCATGTTCTTGTGGGACTGTCTTCTGCCCTCACAACTTaGCTTTTCCATGCTTTTCCTGGAGCAGGAAGGCCCAGGATCCTG | + |
|
Preference number: 1 (lower is better) Translates to: TEFHVLVGLSSALTT*LFHAFPGAGRPRIL Trigger: CAGGATCCTGGGCCTTCCTGCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAACATGAAATTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 90 bp | TTTCTGGCTCACTCTCACCACTGTGTTTCTGCCTTCCCAGCCCTTTaGATGACTGAATTTCATGTTCTTGTGGGACTGTCTTCTGCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: FLAHSHHCVSAFPAL*MTEFHVLVGLSSAL Trigger: GAGGGCAGAAGACAGTCCCACAAGAACATGAAATTCAGTCATGCAAAGGGCTGGGAAGGCAGAAACACAGTGGTGAGAGTGAGCCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR TCA 90 bp | TGGTTTCCACTCATCCATCATGTGTTCTTAGTTCACCTTCACAGTTaGCTTTCTTATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTCC | + |
|
Preference number: 1 (lower is better) Translates to: WFPLIHHVFLVHLHS*LSYLGYQGLLCHES Trigger: GGACTCATGGCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAAGGTGAACTAAGAACACATGATGGATGAGTGGAAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR CCA 90 bp | ATTGATTGTCTACTTCAGCCATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTTCTCCTGGCGGCTGGTaGCTGCCACGAACTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: IDCLLQPSPGGWWLPRTCSPGGW*LPRTCP Trigger: GGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA...ACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAATCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTGGAGCCTGGCGGCTGGTGGCTaGCACGAACTTGTCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: CGTVFCPHNLPFPCFSWSLAAGG*HELVPF Trigger: GAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAG...GCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CAA 90 bp | TTGTCTACTTCAGCCATCTCCTGGCGGCTGGTGGCTGCCACGAACTaGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSTSAISWRLVAATN*SHSSCSSWDIKQEL Trigger: AAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CAA 90 bp | CATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTaGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: HLLAAGGCHELVPFL*LKLGYQTRALFSSS Trigger: TGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR-3UTR TCA 90 bp | ATTGATTGTCTACTTCAGCCATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCTGTCTCCTCAGCACTaGAGTCTAGGAACTTCTATA | + |
|
Preference number: 2 (lower is better) Translates to: IDCLLQPSPGGWWLPRTCLSPQH*SLGTSI Trigger: TATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAG...ACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAATCAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTGGTGAGGCCATTGCGGTaGGCCCTAATCCAATCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FLWDCLLPSQLAFSMLFLVRPLR*ALIQSD Trigger: ATCAGATTGGATTAGGGCCCACCGCAATGGCCTCAC...CAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTTACTCACATCATTGGCCTCCTCTCTGCCATCACAGGCCCCTCTCACATTACTCAAACAGGGCACTaGAACTTGATGAACACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: PFTHIIGLLSAITGPSHITQTGH*NLMNTV Trigger: GACAGTGTTCATCAAGTTGCAGTGCCCTGTTTGAGT...AATGTGAGAGGGGCCTGTGATGGCAGAGAGGAGGCCAATGATGTGAGTAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR CCA 90 bp | TTCACAGTTGACTTTCTTATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTCCTAATTTCATGTTCTTGTaGGACTGTCTTCTGCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: FTVDFLILVTRAFSAMSPNFMFL*DCLLPS Trigger: TGAGGGCAGAAGACAGTCCCACAAGAACATGAAATT...AGGACTCATGGCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CAA 90 bp | TATATCTGTGTCTCACTCTGTCTCTGGACACCTTCTCTCATAGTATaGTCTTCTCGCCAAACTTGGTCATCTCCATTTATCCCACTGATT | + |
|
Preference number: 2 (lower is better) Translates to: YICVSLCLWTPSLIV*SSRQTWSSPFIPLI Trigger: AATCAGTGGGATAAATGGAGATGACCAAGTTTGGCGAGAAGACAATACTATGAGAGAAGGTGTCCAGAGACAGAGTGAGACACAGATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 72 bp | ATTGTCTACTTCAGCCATCTCCTGGCGGCTGGTGGCTaGCACGAACTTGTCCCATTCCTCTTGCTCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IVYFSHLLAAGG*HELVPFLLLKL Trigger: CAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 72 bp | ATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTCCTTaGTCCCCACATCTCCTTTCTGGCTCACTCTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: ILVTRAFSAMSP*SPHLLSGSLSP Trigger: TGGTGAGAGTGAGCCAGAAAGGAGATGTGGGGAGCAAGGACTCATGGCAGAGAAGGCCCTGGTAACCAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 72 bp | CAGTGCTCCTTTTACTCACATCATTGGCCTCCTCTCTaGCATCACAGGCCCCTCTCACATTGGCCTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QCSFYSHHWPPL*HHRPLSHWPAH Trigger: ATGTGCAGGCCAATGTGAGAGGGGCCTGTGATGGCAGAGAGGAGGCCAATGATGTGAGTAAAAGGAGCACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 72 bp | CATGTTCTTGTGGGACTGTCTTCTGCCCTCACAACTTaGCTTTTCCATGCTTTTCCTGGAGCAGGAAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HVLVGLSSALTT*LFHAFPGAGRP Trigger: GGGCCTTCCTGCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CCA 72 bp | GAAATTGATTGTCTACTTCAGCCATCTCCTGGCGGCTaGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EIDCLLQPSPGG*WLPRTCPIPLA Trigger: AGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAGACAATCAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTGGGTGGCTGCCACGAACTaGTCCCATTCCTCTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SCGTVFCPHNLPFPCFSWVAATN*SHSSCS Trigger: TGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCAC...CCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 72 bp | CGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTaGTCAAGCTGGGATATCAAACAAGAGCTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RLVAATNLSHSS*SSWDIKQELCS Trigger: AGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTGGAGCCTTGTCCCATTCCTCTaGCTCAAGCTGGGATATCAA | + |
|
Preference number: 3 (lower is better) Translates to: CGTVFCPHNLPFPCFSWSLVPFL*LKLGYQ Trigger: TTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAG...GCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTGGAGCACCTTCTCTCATAGTATaGTCTTCTCGCCAAACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGLSSALTTCLFHAFPGAPSLIV*SSRQTW Trigger: CCAAGTTTGGCGAGAAGACAATACTATGAGAGAAGG...TGCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR GCA 72 bp | CTCCGACTAACACTAACTCGGACTCAAACAGGGCACTaGAACTTGATGAACACTGTCCCAGAGAGTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LRLTLTRTQTGH*NLMNTVPESLS Trigger: AGATAAACTCTCTGGGACAGTGTTCATCAAGTTGCAGTGCCCTGTTTGAGTCCGAGTTAGTGTTAGTCGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAGTTGACTTTCTTATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTCCTTATCAAACAAGAGCTTaGTTCTCTTCATCAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: FTVDFLILVTRAFSAMSPYQTRA*FSSSEA Trigger: GGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATA...AGGACTCATGGCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR TCA 72 bp | CTCATCCATCATGTGTTCTTAGTTCACCTTCACAGTTaGCTTTCTTATCTTGGTTACCAGGGCCTTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LIHHVFLVHLHS*LSYLGYQGLLC Trigger: GCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAAGGTGAACTAAGAACACATGATGGATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | CATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGACTTCAGCCATCTCCTaGCGGCTGGTGGCTGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HLLAAGGCHELVPFLLLKTSAIS*RLVAAT Trigger: CGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGT...CTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | TCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTCTGGCGGCTGGTGGCTaGCACGAACTTGTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGGWWLPRTCPIPLAQALAAGG*HELVPF Trigger: GAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAG...AGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCTCTCCTGGCGGCTGGTaGCTGCCACGAACTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVAATNLSHSSCSSWDISPGGW*LPRTCP Trigger: GGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA...GATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTCCATCTCCTGGCGGCTaGTGGCTGCCACGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGGWWLPRTCPIPLAQAPSPGG*WLPRTC Trigger: ACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGG...AGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR TCA 90 bp | TTGCTCCCCACATCTCCTTTCTGGCTCACTCTCACCACTGTGTTTCTGCCTTCCGGGCCTTCTCTGCCATaGGTCCTTGCTCCCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: LLPTSPFWLTLTTVFLPSGPSLP*VLAPHI Trigger: GATGTGGGGAGCAAGGACTCATGGCAGAGAAGGCCC...GGAAGGCAGAAACACAGTGGTGAGAGTGAGCCAGAAAGGAGATGTGGGGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CAA 72 bp | TCAGCCATCTCCTGGCGGCTGGTGGCTGCCACGAACTaGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAISWRLVAATN*SHSSCSSWDIK Trigger: TTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | CCAGAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTTACCAGGGCCTTCTCTaGCATGAGTCCTTGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PETDIWMPVASVSSALKSYQGLL*HESLLP Trigger: GGGGAGCAAGGACTCATGGCAGAGAAGGCCCTGGTA...AGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | CTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCTCTCTCCTGGCGGCTGGTaGCTGCCACGAACTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAQAGISNKSFVLFIRGLSPGGW*LPRTCP Trigger: GGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA...GAGGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCACTCTGTCTCTGGACACCTTCTCTCATAGTATTGTCTTCTCGCCAAACTACTTCAGCCATCTCCTaGCGGCTGGTGGCTGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VSLCLWTPSLIVLSSRQTTSAIS*RLVAAT Trigger: CGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGT...AGTTTGGCGAGAAGACAATACTATGAGAGAAGGTGTCCAGAGACAGAGTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCATGAGTCCTTGCTCCCCACATCTCCTTTCTGGCTCACTCTCACCACTAGGCCCCTCTCACATTaGCCTGCACATTTTCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCHESLLPTSPFWLTLTTRPLSH*PAHFHY Trigger: GTAGTGAAAATGTGCAGGCCAATGTGAGAGGGGCCT...AGTGGTGAGAGTGAGCCAGAAAGGAGATGTGGGGAGCAAGGACTCATGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CAA 72 bp | GCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTaGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGGCHELVPFL*LKLGYQTRALF Trigger: GAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTCATTGGCCTCCTCTCTaGCATCACAGGCCCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLVGLSSALTTCLFHAFPHWPPL*HHRPLS Trigger: TGAGAGGGGCCTGTGATGGCAGAGAGGAGGCCAATG...AGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | CCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCCCATCTCCTGGCGGCTaGTGGCTGCCACGAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PIPLAQAGISNKSFVLFIPSPGG*WLPRTC Trigger: ACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGG...GATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR CAA 72 bp | TCATGTTCTTGTGGGACTGTCTTCTGCCCTCACAACTaGCCTTTTCCATGCTTTTCCTGGAGCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSCGTVFCPHN*PFPCFSWSRKA Trigger: GGCCTTCCTGCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAACATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | GAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAGAGAAGACCACAAATaGTGTCCCACTGAAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETDIWMPVASVSSALKSRREDHK*CPTEGT Trigger: TGTCCCTTCAGTGGGACATCATTTGTGGTCTTCTCT...CCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR TCA 90 bp | CTACTTCAGCCATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTAATCACCATGAGATATaGATTGTTTATGGCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQPSPGGWWLPRTCPIPNHHEI*IVYGTV Trigger: GACTGTGCCATAAACAATTCATATCTCATGGTGATT...AGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGGCTGAAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | TCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCTGGCGGCTGGTGGCTaGCACGAACTTGTCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSCSSWDIKQELCSLHLAAGG*HELVPF Trigger: GAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAG...ATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | ACACTGGGTCCGGTTCCTGCAGTGCTCCTTTTACTCACATCATTGGCCTCCTCTACTCAAACAGGGCACTaGAACTTGATGAACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLGPVPAVLLLLTSLASSTQTGH*NLMNTV Trigger: GACAGTGTTCATCAAGTTGCAGTGCCCTGTTTGAGT...AGAGGAGGCCAATGATGTGAGTAAAAGGAGCACTGCAGGAACCGGACCCAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | GACCCCAGAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAAAGTCCGAACAGTTTTaGTGTCAGCGTAGACTACAT | + |
|
Preference number: 4 (lower is better) Translates to: DPRDRHMDACSLCLLSTEKSEQF*CQRRLH Trigger: ATGTAGTCTACGCTGACATCAAAACTGTTCGGACTT...TTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTCTGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR CCA 90 bp | CACTCTTCCTCATCCTCCTTAGACTTCACTGTATCTCCGACTAACACTAACTCGGTGAGGCCATTGCGGTaGGCCCTAATCCAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSSSLDFTVSPTNTNSVRPLR*ALIQSD Trigger: ATCAGATTGGATTAGGGCCCACCGCAATGGCCTCAC...CGAGTTAGTGTTAGTCGGAGATACAGTGAAGTCTAAGGAGGATGAGGAAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | CCAGAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAAAGAAACAGATCTCTaGAGTGGAAACGCGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PETDIWMPVASVSSALKSKETDL*SGNASS Trigger: AGAACTCGCGTTTCCACTTCAGAGATCTGTTTCTTT...AGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAGTTCACCTTCACAGTTaGCTTTCTTATCTTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGGCHELVPFLLLKLGYQVHLHS*LSYLGY Trigger: GTAACCAAGATAAGAAAGTCAACTGTGAAGGTGAAC...TTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | GAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGTTGTCCCATTCCTCTTaGTCAAGCTGGGATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETDIWMPVASVSSALKSRLSHSS*SSWDIK Trigger: TTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAA...CCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | ACCTTCACAGTTGACTTTCTTATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTTCTGCCATGAGTCCTTaGTCCCCACATCTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TFTVDFLILVTRAFSAMSSAMSP*SPHLLS Trigger: AGAAAGGAGATGTGGGGAGCAAGGACTCATGGCAGA...ACTCATGGCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | CGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTACTGGGTCCGGTTCCTaGAGTGCTCCTTTTACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTCPIPLAQAGISNKSFVTGSGS*SAPFTH Trigger: GTGAGTAAAAGGAGCACTGCAGGAACCGGACCCAGT...AACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | GTTCTTGTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTAGACTTTCTGGCCCCTaGTTTCCACTCATCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VLVGLSSALTTCLFHAFPRLSGP*FPLIHH Trigger: ATGATGGATGAGTGGAAACCAGGGGCCAGAAAGTCT...AGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | TGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGTTGTCCCATTCCTCTTaGTCAAGCTGGGATATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WLPRTCPIPLAQAGISNKLSHSS*SSWDIK Trigger: TTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAA...CTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAACTTCTATATGCATTGTGGGACTGTCTTCTaGCCTCACAACTTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MPVASVSSALKSRNFYMHCGTVF*PHNLPF Trigger: AAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCACA...ATGCATATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | TGTCTCACTCTGTCTCTGGACACCTTCTCTCATAGTATTGTCTTCTCGCCAAACGTCCGGTTCCTGCAGTaGTCCTTTTACTCACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CLTLSLDTFSHSIVFSPNVRFLQ*SFYSHH Trigger: ATGATGTGAGTAAAAGGAGCACTGCAGGAACCGGAC...GTTTGGCGAGAAGACAATACTATGAGAGAAGGTGTCCAGAGACAGAGTGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | GAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTTTCCATGCTTTTCCTaGAGCAGGAAGGCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELVPFLLLKLGYQTRALFFPCFS*SRKAQD Trigger: ATCCTGGGCCTTCCTGCTCCAGGAAAAGCATGGAAA...GAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAACTTCTATATGCATTCTGCCCTCACAACTTaGCTTTTCCATGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPVASVSSALKSRNFYMHSALTT*LFHAFP Trigger: AGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGA...ATGCATATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | ATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAACTTCTATGCCTTCCCAGCCCTTTaGATGACTGAATTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: IWMPVASVSSALKSRNFYAFPAL*MTEFHV Trigger: AACATGAAATTCAGTCATGCAAAGGGCTGGGAAGGC...ATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR GCA 90 bp | CCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCCTCCTGCCCACAAATTaGCTTGTATCTTCTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIPLAQAGISNKSFVLFILLPTN*LVSSAF Trigger: GAAGGCAGAAGATACAAGGCAATTTGTGGGCAGGAG...GATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | ACCTTCACAGTTGACTTTCTTATCTTGGTTACCAGGGCCTTCTCTGCCATGAGTTTTTACTCACATCATTaGCCTCCTCTCTGCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TFTVDFLILVTRAFSAMSFYSHH*PPLCHH Trigger: GTGATGGCAGAGAGGAGGCCAATGATGTGAGTAAAA...ACTCATGGCAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | ACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCCTGTCTCCTCAGCACTaGAGTCTAGGAACTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: TCPIPLAQAGISNKSFVLLSPQH*SLGTSI Trigger: TATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAG...GAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCTCTTCCTAAGTCCCAGCCCTTTGCATaGCTGAATTTCATGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWDIKQELCSLHQRPLPKSQPFA*LNFMFL Trigger: CAAGAACATGAAATTCAGTCATGCAAAGGGCTGGGA...CTTAGGAAGAGGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | ACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCGCACCTTCCAGTCTTTaGCAGGACATGATTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCPIPLAQAGISNKSFVLAPSSL*QDMIYG Trigger: TCCATAAATCATGTCCTGCCAAAGACTGGAAGGTGC...GAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTATCTCCGACTAACACTAACTCGGACTCAAACAGGGCACTGCAACTTGATAATTTCATGTTCTTGTaGGACTGTCTTCTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSPTNTNSDSNRALQLDNFMFL*DCLLPS Trigger: TGAGGGCAGAAGACAGTCCCACAAGAACATGAAATT...ATCAAGTTGCAGTGCCCTGTTTGAGTCCGAGTTAGTGTTAGTCGGAGATACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | GTCTCACTCTGTCTCTGGACACCTTCTCTCATAGTATTGTCTTCTCGCCAAACTTTGACTTTCTTATCTTaGTTACCAGGGCCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLCLWTPSLIVLSSRQTLTFLS*LPGPSL Trigger: CAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAA...AGTTTGGCGAGAAGACAATACTATGAGAGAAGGTGTCCAGAGACAGAGTGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| 3UTR CAA 72 bp | GTCTCACTCTGTCTCTGGACACCTTCTCTCATAGTATaGTCTTCTCGCCAAACTTGGTCATCTCCATTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSLCLWTPSLIV*SSRQTWSSPFI Trigger: GATAAATGGAGATGACCAAGTTTGGCGAGAAGACAATACTATGAGAGAAGGTGTCCAGAGACAGAGTGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCAAATGATGTCCCACTaGAGGGACAATCATATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLAQAGISNKSFVLFIRGQMMSH*RDNHIS Trigger: AGAAATATGATTGTCCCTTCAGTGGGACATCATTTG...GCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCTGTCTCCTCAGCACTaGAGTCTAGGAACTTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: LSHSSCSSWDIKQELCSLLSPQH*SLGTSI Trigger: TATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAG...AAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| 3UTR CAA 72 bp | ACTCATCCATCATGTGTTCTTAGTTCACCTTCACAGTaGACTTTCTTATCTTGGTTACCAGGGCCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: THPSCVLSSPSQ*TFLSWLPGPSL Trigger: CAGAGAAGGCCCTGGTAACCAAGATAAGAAAGTCAACTGTGAAGGTGAACTAAGAACACATGATGGATGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | CTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCTCATGGCACAGTCATTTTaGCTTTTGTTCCAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LAQAGISNKSFVLFIRGLMAQSF*LLFQDF Trigger: GAAATCTTGGAACAAAAGTCAAAATGACTGTGCCAT...GAGGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR CCA 90 bp | AACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTTCTTCTCGCCAAACTTaGTCATCTCCATTTATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSHSSCSSWDIKQELCSSSRQT*SSPFIP Trigger: TGGGATAAATGGAGATGACCAAGTTTGGCGAGAAGA...AGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR TCA 90 bp | AACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTGTCTTTGGCAGGACATaGTTTATGGACAGTAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLSHSSCSSWDIKQELCSVFGRT*FMDSRK Trigger: TTTTCTACTGTCCATAAATCATGTCCTGCCAAAGAC...AGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR GCA 90 bp | CGAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCACACATTGAAGAAATaGCATTTGAAGGTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTCPIPLAQAGISNKSFVHTLKK*HLKVQQ Trigger: TTGCTGTACCTTCAAATGGCATTTCTTCAATGTGTG...AACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTGCAGGACATGATTTATaGACAGTAGAAAAGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSHSSCSSWDIKQELCSLAGHDL*TVEKLK Trigger: TTTCAACTTTTCTACTGTCCATAAATCATGTCCTGC...AAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR CAA 90 bp | TCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGCTCTGCCATGAGTCCTaGCTCCCCACATCTCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SWRLVAATNLSHSSCSSWLCHES*LPTSPF Trigger: GAAAGGAGATGTGGGGAGCAAGGACTCATGGCAGAG...CCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | TCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTGGCAGGCCCCTCTCACATaGGCCTGCACATTTTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SWRLVAATNLSHSSCSSWQAPLT*ACTFSL Trigger: TAGTGAAAATGTGCAGGCCAATGTGAGAGGGGCCTG...CCAGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTCTTGTCCCATTCCTCTaGCTCAAGCTGGGATATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPGGWWLPRTCPIPLAQALVPFL*LKLGYQ Trigger: TTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAG...AGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAGCTCTACATCTCCAGCCATaGCACAGATCAAAAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGGWWLPRTCPIPLAQALHLQP*HRSKRE Trigger: CTCTCTTTTTGATCTGTGCAATGGCTGGAGATGTAG...AGCTTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGACTGTCTTCTGCCCTCACAACTTGCCTTTTCCATGCTTTTCCTGGAGCAACAGGGCACTGCAACTaGATGAACACTGTCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VGLSSALTTCLFHAFPGATGHCN*MNTVPE Trigger: CTCTGGGACAGTGTTCATCAAGTTGCAGTGCCCTGT...TGCTCCAGGAAAAGCATGGAAAAGGCAAGTTGTGAGGGCAGAAGACAGTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCGTGGCTGCCACGAACTaGTCCCATTCCTCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLKLGYQTRALFSSSEAVAATN*SHSSCS Trigger: TGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCAC...GGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTCTGAATTTCATGTTCTaGTGGGACTGTCTTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PETDIWMPVASVSSALKSLNFMF*WDCLLP Trigger: GGGCAGAAGACAGTCCCACAAGAACATGAAATTCAG...AGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | CCATCTCCTGGCGGCTGGTGGCTGCCACGAACTTGTCCCATTCCTCTTGCTCAAAGTTCACCTTCACAGTaGACTTTCTTATCTTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PSPGGWWLPRTCPIPLAQSSPSQ*TFLSWL Trigger: TAACCAAGATAAGAAAGTCAACTGTGAAGGTGAACT...TTGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCACCAGCCGCCAGGAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | CCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCGTGGCTGCCACGAACTaGTCCCATTCCTCTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PIPLAQAGISNKSFVLFIVAATN*SHSSCS Trigger: TGAGCAAGAGGAATGGGACAAGTTCGTGGCAGCCAC...GATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS TCA 90 bp | TCTGAAGTGGAAACGCGAGTTCTAACGGGGAAGTCCGAACAGTTTTaGTGTCAGCGTAGACTACATCTCCAGCCATTGCACAGATCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SEVETRVLTGKSEQF*CQRRLHLQPLHRSK Trigger: TTTTGATCTGTGCAATGGCTGGAGATGTAGTCTACGCTGACATCAAAACTGTTCGGACTTCCCCGTTAGAACTCGCGTTTCCACTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000327839.3 ENST00000542530.5 ENST00000621400.4 |
||
| CDS-3UTR CAA 90 bp | CTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCTCTGCACCTTCCAGTCTTaGGCAGGACATGATTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: LAQAGISNKSFVLFIRGLCTFQS*AGHDLW Trigger: CCATAAATCATGTCCTGCCAAAGACTGGAAGGTGCA...GAGGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542530.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAGACAGACATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTCCAATAACCTGGAAATaGATTGTCTACTTCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PETDIWMPVASVSSALKSPITWK*IVYFSH Trigger: ATGGCTGAAGTAGACAATCAATTTCCAGGTTATTGG...AGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATATGTCTGTCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | ATATGGATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAACTTCTATGTCTTCTCGCCAAACTaGGTCATCTCCATTTATCCC | + |
|
Preference number: 5 (lower is better) Translates to: IWMPVASVSSALKSRNFYVFSPN*VISIYP Trigger: GGGATAAATGGAGATGACCAAGTTTGGCGAGAAGAC...ATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCATCCATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | GACTTCACTGTATCTCCGACTAACACTAACTCGGACTCAAACAGGGCACTGCAACCTTCTCTCATAGTATaGTCTTCTCGCCAAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DFTVSPTNTNSDSNRALQPSLIV*SSRQTW Trigger: CCAAGTTTGGCGAGAAGACAATACTATGAGAGAAGG...TTGCAGTGCCCTGTTTGAGTCCGAGTTAGTGTTAGTCGGAGATACAGTGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | CAAGCTGGGATATCAAACAAGAGCTTTGTTCTCTTCATCAGAGGCCTCTTCCTACTTGTCCCATTCCTCTaGCTCAAGCTGGGATATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QAGISNKSFVLFIRGLFLLVPFL*LKLGYQ Trigger: TTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAG...TAGGAAGAGGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATATCCCAGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000542530.5 |
||
| CDS-3UTR CAA 90 bp | ACTGTATCTCCGACTAACACTAACTCGGACTCAAACAGGGCACTGCAACTTGATTGCCCACAAATTGCCTaGTATCTTCTGCCTTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVSPTNTNSDSNRALQLDCPQIA*YLLPSK Trigger: CTTTGAAGGCAGAAGATACAAGGCAATTTGTGGGCA...ATCAAGTTGCAGTGCCCTGTTTGAGTCCGAGTTAGTGTTAGTCGGAGATACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | TTTATCTGCTATCACCAATCACTCTTCCTCATCCTCCTTAGACTTCACTGTATCCCTCCTGCCCACAAATaGCCTTGTATCTTCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FICYHQSLFLILLRLHCIPPAHK*PCIFCL Trigger: AAGGCAGAAGATACAAGGCAATTTGTGGGCAGGAGG...GATACAGTGAAGTCTAAGGAGGATGAGGAAGAGTGATTGGTGATAGCAGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS TCA 90 bp | GGCAAATTTCCTTCTGCTCCCCAAGTGGGTGGTGGACTTCCTCCATaGATAAATGACAAAACCAATGTGTTCAGTCTTACTAATCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GKFPSAPQVGGGLPP*INDKTNVFSLTNQG Trigger: ACCTTGATTAGTAAGACTGAACACATTGGTTTTGTCATTTATTCATGGAGGAAGTCCACCACCCACTTGGGGAGCAGAAGGAAATTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000327839.3 ENST00000621400.4 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGTAGCCTCTGTCTCCTCAGCACTGAAGTCTAGGAACTTCTATATGCATAGAGATGTACACACATaGAAGAAATGCCATTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MPVASVSSALKSRNFYMHRDVHT*KKCHLK Trigger: CTTCAAATGGCATTTCTTCAATGTGTGTACATCTCT...ATGCATATAGAAGTTCCTAGACTTCAGTGCTGAGGAGACAGAGGCTACAGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | GAACTTGTCCCATTCCTCTTGCTCAAGCTGGGATATCAAACAAGAGCTTTGTTCCTTACAAGAAGAAATTaGGATACACAGAGACATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELVPFLLLKLGYQTRALFLTRRN*DTQRHQ Trigger: CTGATGTCTCTGTGTATCCAAATTTCTTCTTGTAAG...GAACAAAGCTCTTGTTTGATATCCCAGCTTGAGCAAGAGGAATGGGACAAGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS-3UTR CAA 90 bp | TTGGTCTTGAATTTCCCAATAACCTGGAAATTGATTGTCTACTTCAGCCATCTCTATCAAACAAGAGCTTaGTTCTCTTCATCAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLNFPITWKLIVYFSHLYQTRA*FSSSEA Trigger: GGCCTCTGATGAAGAGAACAAAGCTCTTGTTTGATA...GAGATGGCTGAAGTAGACAATCAATTTCCAGGTTATTGGGAAATTCAAGACCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540988.1 |
||
| CDS TCA 72 bp | GAAACGCGAGTTCTAACGGGGAAGTCCGAACAGTTTTaGTGTCAGCGTAGACTACATCTCCAGCCATTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ETRVLTGKSEQF*CQRRLHLQPLH Trigger: GTGCAATGGCTGGAGATGTAGTCTACGCTGACATCAAAACTGTTCGGACTTCCCCGTTAGAACTCGCGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000327839.3 ENST00000542530.5 ENST00000621400.4 |
||
| CDS TCA 72 bp | CCTTCTGCTCCCCAAGTGGGTGGTGGACTTCCTCCATaGATAAATGACAAAACCAATGTGTTCAGTCTTACT | + |
|
Preference number: 6 (lower is better) Translates to: PSAPQVGGGLPP*INDKTNVFSLT Trigger: AGTAAGACTGAACACATTGGTTTTGTCATTTATTCATGGAGGAAGTCCACCACCCACTTGGGGAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000327839.3 ENST00000621400.4 |
||
| CDS CAA 90 bp | ATACACAGAGACATCAGAGATGTACACACATTGAAGAAATGCCATTaGAAGGTACAGCAAAAAGGTGATCAGCATAGCAGTAATGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IHRDIRDVHTLKKCH*KVQQKGDQHSSNVL Trigger: CAAGACATTACTGCTATGCTGATCACCTTTTTGCTGTACCTTCAAATGGCATTTCTTCAATGTGTGTACATCTCTGATGTCTCTGTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540988.1 ENST00000621400.4 |
||
| CDS TCA 72 bp | TACAGCAAAAAGGTGATCAGCATAGCAGTAATGTCTTaGATCACCATGAGATATGAATTGTTTATGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YSKKVISIAVMS*ITMRYELFMAQ Trigger: CTGTGCCATAAACAATTCATATCTCATGGTGATTCAAGACATTACTGCTATGCTGATCACCTTTTTGCTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621400.4 |
||
| CDS CAA 90 bp | AATGTGTTCAGTCTTACTAATCAAGGTAGCAGATTTCTCGAATACTaGTATGACATGGAAGAAATTACTAACCATACAGTAGGTTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: NVFSLTNQGSRFLEY*YDMEEITNHTVGSR Trigger: ACGAGAACCTACTGTATGGTTAGTAATTTCTTCCATGTCATACAAGTATTCGAGAAATCTGCTACCTTGATTAGTAAGACTGAACACATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000327839.3 ENST00000621400.4 |
||