Pregenerated sensors for CLEC4O (Homo sapiens)
Ensembl gene IDs: ENSG00000267453Ensembl transcript IDs: ENST00000588182.2, ENST00000589345.6, ENST00000639800.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGAAAAGAAGCTGTAACAGGAGCCCTGGAAGGCCTTCCAGCTCTTaGGGCAGGGCAGGCAGGAGGATTCATTGCGTGCCTGGACAACCT | + |
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Preference number: 5 (lower is better) Translates to: LKRSCNRSPGRPSSS*GRAGRRIHCVPGQP Trigger: AGGTTGTCCAGGCACGCAATGAATCCTCCTGCCTGCCCTGCCCCAAGAGCTGGAAGGCCTTCCAGGGCTCCTGTTACAGCTTCTTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS TCA 90 bp | CTTCTGGGCACAAGAATCAATGGCCTGGGGCCAGGTGAGGTTGTCTaGAAAGAAGCTGTAACAGGAGCCCTGGAAGGCCTTCCAGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLGTRINGLGPGEVV*KEAVTGALEGLPAL Trigger: AAGAGCTGGAAGGCCTTCCAGGGCTCCTGTTACAGCTTCTTTTCAGACAACCTCACCTGGCCCCAGGCCATTGATTCTTGTGCCCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS GCA 90 bp | CAGGGCAGGCAGGAGGATTCATTGCGTGCCTGGACAACCTTTATTTaGCTGAACATTTCACCCCGAATGAAGTCCCGGTCATGTCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: QGRQEDSLRAWTTFI*LNISPRMKSRSCPV Trigger: CACCGGACATGACCGGGACTTCATTCGGGGTGAAATGTTCAGGCAAATAAAGGTTGTCCAGGCACGCAATGAATCCTCCTGCCTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS GCA 90 bp | CAGGAAGTCCTATTCTGCTCAGCTGTTGATGACAACCAAGTGAGCTaGTTCTGGGCACAAGAATCAATGGCCTGGGGCCAGGTGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: QEVLFCSAVDDNQVS*FWAQESMAWGQVRL Trigger: CAACCTCACCTGGCCCCAGGCCATTGATTCTTGTGCCCAGAAGCAGCTCACTTGGTTGTCATCAACAGCTGAGCAGAATAGGACTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS CCA 90 bp | GCACTTCCTTGGCCATCTTTGAAGAGGCCTATCCAGGATGTCGCCTaGTTAGTTGATGTCAGGAAGTCCATTGCGTGCCTGGACAACCTT | + |
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Preference number: 5 (lower is better) Translates to: ALPWPSLKRPIQDVA*LVDVRKSIACLDNL Trigger: AAGGTTGTCCAGGCACGCAATGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAAGATGGCCAAGGAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588182.2 |
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| CDS CCA 90 bp | GTCCTATTCTGCTCAGCTGTTGATGACAACCAAGTGAGCTGCTTCTaGGCACAAGAATCAATGGCCTGGGGCCAGGTGAGGTTGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VLFCSAVDDNQVSCF*AQESMAWGQVRLSE Trigger: TTCAGACAACCTCACCTGGCCCCAGGCCATTGATTCTTGTGCCCAGAAGCAGCTCACTTGGTTGTCATCAACAGCTGAGCAGAATAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS CCA 90 bp | AGTTGCTCCAGTGTCCCTGGTAGAGCATCATCACACAGGCTGGGGTaGTTCCATTATCATCCAATTTCCTGGAGTCCCAGTTTATGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SCSSVPGRASSHRLG*FHYHPISWSPSLCR Trigger: CCTACATAAACTGGGACTCCAGGAAATTGGATGATAATGGAACCACCCCAGCCTGTGTGATGATGCTCTACCAGGGACACTGGAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000588182.2 ENST00000589345.6 ENST00000639800.1 |
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| CDS CCA 90 bp | AGAGGAGTTGCTCCAGTGTCCCTGGTAGAGCATCATCACACAGGCTaGGGTGGTTCCATTATCATCCAATTTCCTGGAGTCCCAGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: RGVAPVSLVEHHHTG*GGSIIIQFPGVPVY Trigger: ATAAACTGGGACTCCAGGAAATTGGATGATAATGGAACCACCCCAGCCTGTGTGATGATGCTCTACCAGGGACACTGGAGCAACTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000588182.2 ENST00000589345.6 ENST00000639800.1 |
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| CDS CCA 90 bp | GCACTTCCTTGGCCATCTTTGAAGAGGCCTATCCAGGATGTCGCCTaGTTAGTTGATGTCAGGAAGTCCTATTCTGCTCAGCTGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: ALPWPSLKRPIQDVA*LVDVRKSYSAQLLM Trigger: CATCAACAGCTGAGCAGAATAGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAAGATGGCCAAGGAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS GCA 72 bp | TTCACCCCGAATGAAGTCCCGGTCATGTCCGGTGTCTaGCAGCCCCGGTGTCACTCTGGACAGAAGCACACT | + |
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Preference number: 6 (lower is better) Translates to: FTPNEVPVMSGV*QPRCHSGQKHT Trigger: AGTGTGCTTCTGTCCAGAGTGACACCGGGGCTGGCAGACACCGGACATGACCGGGACTTCATTCGGGGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS TCA 72 bp | TTTGAAGAGGCCTATCCAGGATGTCGCCTGGTTAGTTaGTGTCAGGAAGTCCAGTTTCCCCCAGCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: FEEAYPGCRLVS*CQEVQFPPAWG Trigger: CCCCCAGGCTGGGGGAAACTGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589345.6 |
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| CDS CAA 90 bp | GCAGGGCAGGCAGGAGGATTCATTGCGTGCCTGGACAACCTTTATTaGCCTGAACATTTCACCCCGAATGAAGTCCCGGTCATGTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: AGQAGGFIACLDNLY*PEHFTPNEVPVMSG Trigger: ACCGGACATGACCGGGACTTCATTCGGGGTGAAATGTTCAGGCAAATAAAGGTTGTCCAGGCACGCAATGAATCCTCCTGCCTGCCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS TCA 72 bp | GCTTCTGGGCACAAGAATCAATGGCCTGGGGCCAGGTaGGGTTGTCTGAAAAGAAGCTGTAACAGGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ASGHKNQWPGAR*GCLKRSCNRSP Trigger: AGGGCTCCTGTTACAGCTTCTTTTCAGACAACCTCACCTGGCCCCAGGCCATTGATTCTTGTGCCCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS GCA 72 bp | CTATTCTGCTCAGCTGTTGATGACAACCAAGTGAGCTaGTTCTGGGCACAAGAATCAATGGCCTGGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LFCSAVDDNQVS*FWAQESMAWGQ Trigger: CTGGCCCCAGGCCATTGATTCTTGTGCCCAGAAGCAGCTCACTTGGTTGTCATCAACAGCTGAGCAGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS CCA 72 bp | TGGCCATCTTTGAAGAGGCCTATCCAGGATGTCGCCTaGTTAGTTGATGTCAGGAAGTCCATTGCGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: WPSLKRPIQDVA*LVDVRKSIACL Trigger: CAGGCACGCAATGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAAGATGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588182.2 |
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| CDS CCA 72 bp | CACAGGCTGGGGTGGTTCCATTATCATCCAATTTCCTaGAGTCCCAGTTTATGTAGGTGGGGGCTGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: HRLGWFHYHPIS*SPSLCRWGLSH Trigger: ATGGCTCAGCCCCCACCTACATAAACTGGGACTCCAGGAAATTGGATGATAATGGAACCACCCCAGCCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000588182.2 ENST00000589345.6 ENST00000639800.1 |
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| CDS CCA 72 bp | GCTCCAGTGTCCCTGGTAGAGCATCATCACACAGGCTaGGGTGGTTCCATTATCATCCAATTTCCTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: APVSLVEHHHTG*GGSIIIQFPGV Trigger: GACTCCAGGAAATTGGATGATAATGGAACCACCCCAGCCTGTGTGATGATGCTCTACCAGGGACACTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000588182.2 ENST00000589345.6 ENST00000639800.1 |
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| CDS CCA 72 bp | TGGCCATCTTTGAAGAGGCCTATCCAGGATGTCGCCTaGTTAGTTGATGTCAGGAAGTCCAGTTTCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WPSLKRPIQDVA*LVDVRKSSFPQ Trigger: CTGGGGGAAACTGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAAGATGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589345.6 |
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| CDS TCA 72 bp | TTTGAAGAGGCCTATCCAGGATGTCGCCTGGTTAGTTaGTGTCAGGAAGTCCATTGCGTGCCTGGACAACCT | + |
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Preference number: 6 (lower is better) Translates to: FEEAYPGCRLVS*CQEVHCVPGQP Trigger: AGGTTGTCCAGGCACGCAATGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588182.2 |
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| CDS CCA 72 bp | TTGAGGATGCACAACAAGAGGTTTACACCAATCTTATaGGGTAGGGGCCTAGGTCAGCAGCTCTGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LRMHNKRFTPIL*GRGLGQQLCLF Trigger: GAAGAGGCAGAGCTGCTGACCTAGGCCCCTACCCCATAAGATTGGTGTAAACCTCTTGTTGTGCATCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588182.2 ENST00000589345.6 |
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| CDS CAA 72 bp | GTCAGGAAGTCCATTGCGTGCCTGGACAACCTTTATTaGCCTGAACATTTCACCCCGAATGAAGTCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: VRKSIACLDNLY*PEHFTPNEVPV Trigger: GACCGGGACTTCATTCGGGGTGAAATGTTCAGGCAAATAAAGGTTGTCCAGGCACGCAATGGACTTCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588182.2 |
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| CDS CAA 72 bp | GCAGGAGGATTCATTGCGTGCCTGGACAACCTTTATTaGCCTGAACATTTCACCCCGAATGAAGTCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: AGGFIACLDNLY*PEHFTPNEVPV Trigger: GACCGGGACTTCATTCGGGGTGAAATGTTCAGGCAAATAAAGGTTGTCCAGGCACGCAATGAATCCTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS CCA 72 bp | TGGCCATCTTTGAAGAGGCCTATCCAGGATGTCGCCTaGTTAGTTGATGTCAGGAAGTCCTATTCTGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: WPSLKRPIQDVA*LVDVRKSYSAQ Trigger: CTGAGCAGAATAGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAAGATGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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| CDS TCA 72 bp | TTTGAAGAGGCCTATCCAGGATGTCGCCTGGTTAGTTaGTGTCAGGAAGTCCTATTCTGCTCAGCTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: FEEAYPGCRLVS*CQEVLFCSAVD Trigger: ATCAACAGCTGAGCAGAATAGGACTTCCTGACATCAACTAACCAGGCGACATCCTGGATAGGCCTCTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000639800.1 |
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