Pregenerated sensors for CLEC4D (Homo sapiens)
Ensembl gene IDs: ENSG00000166527Ensembl transcript IDs: ENST00000299665.3, ENST00000382064.6
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCATCAAACACCATACAAAAACCACATTATCTACACACACACACACACACATACTTTTCTGTGTTCCAATaGCGCACGTACATTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PSNTIQKPHYLHTHTHTYFSVFQ*RTYILP Trigger: AGGCAGAATGTACGTGCGTCATTGGAACACAGAAAA...GTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTTGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| 3UTR-3UTR GCA 90 bp | CCATCAAACACCATACAAAAACCACATTATCTACACACACACACACACACATACGACGCACGTACATTCTaGCTTATTCTAATTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: PSNTIQKPHYLHTHTHTYDARTF*LILIGF Trigger: AAAACCAATTAGAATAAGGCAGAATGTACGTGCGTC...GTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTTGATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAAATGACAAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTACTAAAAACGCTGTATaGACCAGCATGTTTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GKNDKEIALFTLFFHTCITKNAV*TSMFSV Trigger: CACAGAAAACATGCTGGTTCATACAGCGTTTTTAGT...AATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTTGTCATTTTTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCCTATTCTTCCATACATaGATTCAGTGCACACCAATT | + |
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Preference number: 2 (lower is better) Translates to: LVVKTITSLLVQTIVIQLLFFHT*IQCTPI Trigger: AATTGGTGTGCACTGAATGCATGTATGGAAGAATAG...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| 3UTR-3UTR CAA 90 bp | GGGAAAAATGACAAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTACACATACACACATGTaGTCTCGAATGAATCAAACA | + |
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Preference number: 3 (lower is better) Translates to: GKNDKEIALFTLFFHTCITHTHM*SRMNQT Trigger: TGTTTGATTCATTCGAGACAACATGTGTGTATGTGT...AATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTTGTCATTTTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAGCTCAGCTTCCGTGCTaGTGGTCATCAGATGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPAQLPC*WSSDGP Trigger: GGGCCCATCTGATGACCATCAGCACGGAAGCTGAGC...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAACCGAAGGTATCAGCTaGGGATGCATGCCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPTEGIS*GCMPPS Trigger: GGAAGGAGGCATGCATCCCCAGCTGATACCTTCGGT...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCACTGATGGTCATCAGATaGGCCCCCATCCCTGAACAG | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPLMVIR*APIPEQ Trigger: CTGTTCAGGGATGGGGGCCCATCTGATGACCATCAG...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCATCTGCGTGGGTTAAATaGCGTCTGGTCCACCCAACG | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPSAWVK*RLVHPT Trigger: CGTTGGGTGGACCAGACGCCATTTAACCCACGCAGA...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | TTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAATTGAAAGACAGGGGTTTCCTTTaGTACATTCCGGGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LHYSRYSSIHAFSAHQLKDRGFL*YIPGDE Trigger: CTCATCTCCCGGAATGTATCAAAGGAAACCCCTGTC...TTTCAATTGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAGCCTCTCTTACAGCGTaGAAAGTTGTGATGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPASLTA*KVVMSH Trigger: GTGACTCATCACAACTTTTCACGCTGTAAGAGAGGC...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | GGGAAAAATGACAAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTTCCACCCAACGCCACTaGCCTTTGGCATTCTCATCT | + |
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Preference number: 4 (lower is better) Translates to: GKNDKEIALFTLFFHTCISTQRH*PLAFSS Trigger: AGATGAGAATGCCAAAGGTCAGTGGCGTTGGGTGGA...AATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTTGTCATTTTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | AAACACCATACAAAAACCACATTATCTACACACACACACACACACATACACACAGGTATCAGCTGGGGATaGATGCCTCCTTCCAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: KHHTKTTLSTHTHTHIHTGISWG*MPPSSL Trigger: TAAACTGGAAGGAGGCATGCATCCCCAGCTGATACC...TGTGTGTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCATGGTGCTCTAACTTGTaGACTCCTGTGCCTCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPWCSNL*TPVPLL Trigger: TAAGAGAGGCACAGGAGTGCACAAGTTAGAGCACCA...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | CCATCAAACACCATACAAAAACCACATTATCTACACACACACACACACACATACTCGGGTTCATTCTTATaGCAGAATACTCTGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNTIQKPHYLHTHTHTYSGSFL*QNTLRG Trigger: CCCACGCAGAGTATTCTGGCATAAGAATGAACCCGA...GTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTTGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CCA 90 bp | AAACACCATACAAAAACCACATTATCTACACACACACACACACACATACACACACCAGAATACTCTGCGTaGGTTAAATGGCGTCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KHHTKTTLSTHTHTHIHTPEYSA*VKWRLV Trigger: GACCAGACGCCATTTAACCCACGCAGAGTATTCTGG...TGTGTGTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCATTGAGCTTTGCATGGTaGTCTAACTTGTGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPLSFAW*SNLCTP Trigger: AGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAA...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCACACAGTTTTCTCCCTaGGAGTTGTCGGGTTCATTC | + |
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Preference number: 4 (lower is better) Translates to: LVVKTITSLLVQTIVIQLTQFSP*ELSGSF Trigger: GAATGAACCCGACAACTCTCAGGGAGAAAACTGTGT...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | AAACACCATACAAAAACCACATTATCTACACACACACACACACACATACACACATTTTCTGTGTTCCAATaGCGCACGTACATTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KHHTKTTLSTHTHTHIHTFSVFQ*RTYILP Trigger: AGGCAGAATGTACGTGCGTCATTGGAACACAGAAAA...TGTGTGTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | GGGAAAAATGACAAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTACTTGTGCACTCCTGTaGCTCTCTTACAGCGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: GKNDKEIALFTLFFHTCITCALL*LSYSVK Trigger: TTTCACGCTGTAAGAGAGGCACAGGAGTGCACAAGT...AATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTTGTCATTTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCCCTTCCAGTTTACTTTaGGGTTTTTCTAGCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: LVVKTITSLLVQTIVIQLPSSLL*GFSSPI Trigger: AATGGGGCTAGAAAAACCTCAAAGTAAACTGGAAGG...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCACGTCTATCCAGAAACTaGATAATAAAGTTCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KEIALFTLFFHTCIQCTPRLSRN*IIKFCS Trigger: TGAGCAGAACTTTATTATTCAGTTTCTGGATAGACG...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CCA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCCATTTGAGCTTTGCATaGTGCTCTAACTTGTGCACT | + |
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Preference number: 4 (lower is better) Translates to: LVVKTITSLLVQTIVIQLHLSFA*CSNLCT Trigger: AGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATG...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | GGGAAAAATGACAAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTACAAGGACCACTTTCTaGGTTTCTAGTTCAATGTTG | + |
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Preference number: 4 (lower is better) Translates to: GKNDKEIALFTLFFHTCITRTTF*VSSSML Trigger: CAACATTGAACTAGAAACTCAGAAAGTGGTCCTTGT...AATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTTGTCATTTTTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR TCA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCACTAAAAACGCTGTATaGACCAGCATGTTTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LVVKTITSLLVQTIVIQLTKNAV*TSMFSV Trigger: CACAGAAAACATGCTGGTTCATACAGCGTTTTTAGT...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | TTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAATTGAAACTATTCTTCCATACATaGATTCAGTGCACACCAATT | + |
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Preference number: 4 (lower is better) Translates to: LHYSRYSSIHAFSAHQLKLFFHT*IQCTPI Trigger: AATTGGTGTGCACTGAATGCATGTATGGAAGAATAG...TTTCAATTGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | CCATCAAACACCATACAAAAACCACATTATCTACACACACACACACACACATACAAAGTTGGATGTGACTaGCCTTTGCAATTAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: PSNTIQKPHYLHTHTHTYKVGCD*PLQLMF Trigger: AAACATTAATTGCAAAGGGCAGTCACATCCAACTTT...GTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTTGATGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR GCA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCGACGCACGTACATTCTaGCTTATTCTAATTGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: LVVKTITSLLVQTIVIQLDARTF*LILIGF Trigger: AAAACCAATTAGAATAAGGCAGAATGTACGTGCGTC...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS CCA 90 bp | GCACTTTTCAGTTCTGATTTCTCTTTGATGCATTTGAGCTTTGCATaGTGCTCTAACTTGTGCACTCCTGTGCCTCTCTTACAGCGTGAA | + |
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Preference number: 5 (lower is better) Translates to: ALFSSDFSLMHLSFA*CSNLCTPVPLLQRE Trigger: TTCACGCTGTAAGAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAAAGAGAAATCAGAACTGAAAAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS-3UTR CAA 90 bp | TTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAATTGAAAGCATGGTGCTCTAACTaGTGCACTCCTGTGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LHYSRYSSIHAFSAHQLKAWCSN*CTPVPL Trigger: GAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGC...TTTCAATTGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS GCA 90 bp | CTTTTCAGTTCTGATTTCTCTTTGATGCATTTGAGCTTTGCATGGTaGTCTAACTTGTGCACTCCTGTGCCTCTCTTACAGCGTGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: LFSSDFSLMHLSFAW*SNLCTPVPLLQREK Trigger: CTTTTCACGCTGTAAGAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAAAGAGAAATCAGAACTGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS-3UTR CAA 90 bp | CCATCAAACACCATACAAAAACCACATTATCTACACACACACACACACACATACTGTCTAATTAGTCTCTaGTTCAATGGTCAGGACGGC | + |
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Preference number: 5 (lower is better) Translates to: PSNTIQKPHYLHTHTHTYCLISL*FNGQDG Trigger: GCCGTCCTGACCATTGAACAAGAGACTAATTAGACA...GTATGTGTGTGTGTGTGTGTGTAGATAATGTGGTTTTTGTATGGTGTTTGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CAA 90 bp | TTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCAATTGAAACTCTCAGCCCACGTCTaGTTGTCAGTAAGAGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: LHYSRYSSIHAFSAHQLKLSAHV*LSVRGK Trigger: TTTTCCTCTTACTGACAACAAGACGTGGGCTGAGAG...TTTCAATTGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CAA 90 bp | AAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTCAGTGCACACCACCAGGCCCATTTATCTaGGTTATAAACAAGAACAAC | + |
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Preference number: 5 (lower is better) Translates to: KEIALFTLFFHTCIQCTPPGPFI*VINKNN Trigger: GTTGTTCTTGTTTATAACCAAGATAAATGGGCCTGG...TGGTGTGCACTGAATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CAA 90 bp | GGGAAAAATGACAAAGAGATTGCATTATTCACGCTATTCTTCCATACATGCATTTTCTCTTTGATGCATTaGAGCTTTGCATGGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: GKNDKEIALFTLFFHTCIFSLMH*SFAWCS Trigger: AGAGCACCATGCAAAGCTCAAATGCATCAAAGAGAA...AATGCATGTATGGAAGAATAGCGTGAATAATGCAATCTCTTTGTCATTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS GCA 90 bp | GAGTTTCTAGTTCAATGTTGTTCCAGGTATTTTACAAATCCTACTTaGTTCAAAGTTACAAGGAACATCATTCCAGGCCCATTTATCTTG | + |
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Preference number: 5 (lower is better) Translates to: EFLVQCCSRYFTNPT*FKVTRNIIPGPFIL Trigger: CAAGATAAATGGGCCTGGAATGATGTTCCTTGTAACTTTGAAGCAAGTAGGATTTGTAAAATACCTGGAACAACATTGAACTAGAAACTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CAA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCTTCAGTGCACACCAATaGAAAAGTAAACACCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LVVKTITSLLVQTIVIQLFSAHQ*KSKHLE Trigger: TTCAAGGTGTTTACTTTTCAATTGGTGTGCACTGAA...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS-3UTR CAA 90 bp | CTGGTTGTCAAAACAATAACTTCCTTGCTAGTTCAAACTATAGTTATACAGCTCCATATTTTATTAAAGTaGGATGTGACTGCCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: LVVKTITSLLVQTIVIQLHILLK*DVTALC Trigger: GCAAAGGGCAGTCACATCCAACTTTAATAAAATATG...GAGCTGTATAACTATAGTTTGAACTAGCAAGGAAGTTATTGTTTTGACAACCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS TCA 72 bp | TTTATGGAGAGCTGCATGGAGTCGAATTCATGGTGCTaGGGAGCAGACAGACTGCAGGCCTCCGCTAAACCT | + |
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Preference number: 6 (lower is better) Translates to: FMESCMESNSWC*GADRLQASAKP Trigger: AGGTTTAGCGGAGGCCTGCAGTCTGTCTGCTCCTCAGCACCATGAATTCGACTCCATGCAGCTCTCCATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000382064.6 |
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| CDS CCA 72 bp | AAGTTCTGCTCAGCTTCCGTGCTGATGGTCATCAGATaGGCCCCCATCCCTGAACAGTTCCTTTCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KFCSASVLMVIR*APIPEQFLSLS Trigger: TGAGAGTGAAAGGAACTGTTCAGGGATGGGGGCCCATCTGATGACCATCAGCACGGAAGCTGAGCAGAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS CCA 72 bp | TTCATTCTTATGCCAGAATACTCTGCGTGGGTTAAATaGCGTCTGGTCCACCCAACGCCACTGACCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FILMPEYSAWVK*RLVHPTPLTFG Trigger: GCCAAAGGTCAGTGGCGTTGGGTGGACCAGACGCCATTTAACCCACGCAGAGTATTCTGGCATAAGAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS CAA 90 bp | GTGCTCCCTTCAGCACTTTTCAGTTCTGATTTCTCTTTGATGCATTaGAGCTTTGCATGGTGCTCTAACTTGTGCACTCCTGTGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VLPSALFSSDFSLMH*SFAWCSNLCTPVPL Trigger: GAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAAAGAGAAATCAGAACTGAAAAGTGCTGAAGGGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS GCA 72 bp | TTGATGCATTTGAGCTTTGCATGGTGCTCTAACTTGTaGACTCCTGTGCCTCTCTTACAGCGTGAAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LMHLSFAWCSNL*TPVPLLQREKL Trigger: CAACTTTTCACGCTGTAAGAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS CAA 72 bp | TCTTTGATGCATTTGAGCTTTGCATGGTGCTCTAACTaGTGCACTCCTGTGCCTCTCTTACAGCGTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLMHLSFAWCSN*CTPVPLLQREK Trigger: CTTTTCACGCTGTAAGAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS GCA 72 bp | TCTGATTTCTCTTTGATGCATTTGAGCTTTGCATGGTaGTCTAACTTGTGCACTCCTGTGCCTCTCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: SDFSLMHLSFAW*SNLCTPVPLLQ Trigger: CTGTAAGAGAGGCACAGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAAAGAGAAATCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS CAA 72 bp | TCAGCACTTTTCAGTTCTGATTTCTCTTTGATGCATTaGAGCTTTGCATGGTGCTCTAACTTGTGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: SALFSSDFSLMH*SFAWCSNLCTP Trigger: AGGAGTGCACAAGTTAGAGCACCATGCAAAGCTCAAATGCATCAAAGAGAAATCAGAACTGAAAAGTGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299665.3 ENST00000382064.6 |
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| CDS CAA 90 bp | ACTTGCTTCAAAGTTACAAGGAACATCATTCCAGGCCCATTTATCTaGGTTATAAACAAGAACAACACAGTTTTCTCCCTGAGAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: TCFKVTRNIIPGPFI*VINKNNTVFSLRVV Trigger: GACAACTCTCAGGGAGAAAACTGTGTTGTTCTTGTTTATAACCAAGATAAATGGGCCTGGAATGATGTTCCTTGTAACTTTGAAGCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS CAA 72 bp | AAAGTTACAAGGAACATCATTCCAGGCCCATTTATCTaGGTTATAAACAAGAACAACACAGTTTTCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: KVTRNIIPGPFI*VINKNNTVFSL Trigger: CAGGGAGAAAACTGTGTTGTTCTTGTTTATAACCAAGATAAATGGGCCTGGAATGATGTTCCTTGTAACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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| CDS CAA 90 bp | CCCCAGAGTATATTTCTGTGGATAGGGGAATATATTCAGAAATACTaGAGATCGAACACCAATGTTACATATTGTAGTGAGATTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PQSIFLWIGEYIQKY*RSNTNVTYCSEIRK Trigger: CTTTCTAATCTCACTACAATATGTAACATTGGTGTTCGATCTCAAGTATTTCTGAATATATTCCCCTATCCACAGAAATATACTCTGGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299665.3 |
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