Pregenerated sensors for CLEC4A (Homo sapiens)
Ensembl gene IDs: ENSG00000111729Ensembl transcript IDs: ENST00000229332.12, ENST00000345999.9, ENST00000352620.9, ENST00000360500.5, ENST00000641376.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTaGATGCCAGAATGTGGAACTTTCATTGTATGGTGT | + |
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Preference number: 3 (lower is better) Translates to: HNAALIGITGLT*MPECGTFIVWC Trigger: ACACCATACAATGAAAGTTCCACATTCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| 3UTR CCA 72 bp | TTAAGAGAGACTCATGTTCTCTCCATGTGTGCACAATaGGGGCCTCCAGTACAGGCTCTGGCACATGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: LRETHVLSMCAQ*GPPVQALAHEK Trigger: TTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTCTCTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| 3UTR CCA 72 bp | GAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTaGGCTCACGTGGATGCCAGAATGTGGAACTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: ENLAQRSAHWDH*AHVDARMWNFH Trigger: ATGAAAGTTCCACATTCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| 3UTR GCA 72 bp | ATAAAAATTAAGAGAGACTCATGTTCTCTCCATGTGTaGACAATGGGGGCCTCCAGTACAGGCTCTGGCACA | + |
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Preference number: 3 (lower is better) Translates to: IKIKRDSCSLHV*TMGASSTGSGT Trigger: TGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTCTCTTAATTTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | ACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCACAACGCAGCGCTCATTaGGATCACTGGGCTCACGTG | + |
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Preference number: 4 (lower is better) Translates to: THVLSMCAQWGPPVQALAQRSAH*DHWAHV Trigger: CACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTG...TGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR GCA 90 bp | GACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCTGTTCTCTCCATGTGTaGACAATGGGGGCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DSCSLHVCTMGASSTGSGCSLHV*TMGASS Trigger: ACTGGAGGCCCCCATTGTGCACACATGGAGAGAACA...GCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | ACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCAGCTCATTGGGATCACTaGGCTCACGTGGATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: THVLSMCAQWGPPVQALAAHWDH*AHVDAR Trigger: TCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGC...TGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | AATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCCAGACAACGCAGCGCTCATTaGGATCACTGGGCTCACGTG | + |
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Preference number: 4 (lower is better) Translates to: NLAQRSAHWDHWAHVDARQRSAH*DHWAHV Trigger: CACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTG...TCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR GCA 90 bp | ACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCATGTTCTCTCCATGTGTaGACAATGGGGGCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: THVLSMCAQWGPPVQALACSLHV*TMGASS Trigger: ACTGGAGGCCCCCATTGTGCACACATGGAGAGAACA...TGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | GACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCATCACTGGGCTCACGTaGATGCCAGAATGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: DSCSLHVCTMGASSTGSGITGLT*MPECGT Trigger: AGTTCCACATTCTGGCATCCACGTGAGCCCAGTGAT...GCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | GAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCCGCTCATTGGGATCACTaGGCTCACGTGGATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: ENLAQRSAHWDHWAHVDAAHWDH*AHVDAR Trigger: TCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGC...GGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR TCA 90 bp | CTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCACATGAAAAACCGGTATTACTTTTGTaGGGGGCAGTCCTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LSMCAQWGPPVQALAHEKPVLLL*GAVLSL Trigger: CAAGGAGAGGACTGCCCCTCACAAAAGTAATACCGG...TTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR TCA 90 bp | AATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCCAGACCGGTATTACTTTTGTaGGGGGCAGTCCTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NLAQRSAHWDHWAHVDARPVLLL*GAVLSL Trigger: CAAGGAGAGGACTGCCCCTCACAAAAGTAATACCGG...TCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR GCA 90 bp | GAGAGACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCCCTCTCCTTGGAAGCTaGAGAAGAGGCTGTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: ERLMFSPCVHNGGLQYRLPLLGS*RRGCVD Trigger: ATCAACACAGCCTCTTCTGCAGCTTCCAAGGAGAGG...GAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR TCA 90 bp | AATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCCAGACTGACCTTCTGGATCTaGGAGCCCCACAAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: NLAQRSAHWDHWAHVDARLTFWI*EPHKIS Trigger: GCTTATTTTGTGGGGCTCTCAGATCCAGAAGGTCAG...TCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR CCA 90 bp | CGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCATCACTGGGCTCACGTaGATGCCAGAATGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: RKFSTTQRSLGSLGSRGCITGLT*MPECGT Trigger: AGTTCCACATTCTGGCATCCACGTGAGCCCAGTGAT...GCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR TCA 90 bp | ACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCAGCAGATTCTGGAAGATaGAATCCTGCTCTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: THVLSMCAQWGPPVQALAADSGR*NPALLE Trigger: CTCAAGAAGAGCAGGATTTCATCTTCCAGAATCTGC...TGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR GCA 90 bp | GACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCTCCTTCTCACTGTCTTaGCAAGATGCTGATTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: DSCSLHVCTMGASSTGSGSFSLS*QDADSV Trigger: TACTGAATCAGCATCTTGGCAAGACAGTGAGAAGGA...GCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | GACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCTCACAAACTGACCTTTaGGGACCAAGACAATTAACA | + |
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Preference number: 4 (lower is better) Translates to: DSCSLHVCTMGASSTGSGSQTDL*GPRQLT Trigger: TGTTAATTGTCTTGGTCCTCAAAGGTCAGTTTGTGA...GCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | CTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCACATGAAAAACATCATCTCACAAACTaGCCTTTGAGGACCAAGACA | + |
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Preference number: 4 (lower is better) Translates to: LSMCAQWGPPVQALAHEKHHLTN*PLRTKT Trigger: TGTCTTGGTCCTCAAAGGTCAGTTTGTGAGATGATG...TTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | AGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCCAGAATGTGGCAGATTCTGGAAGATaGAATCTGACAAAAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: STTQRSLGSLGSRGCQNVADSGR*NLTKAI Trigger: TATTGCTTTTGTCAGATTTCATCTTCCAGAATCTGC...CACATTCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR GCA 90 bp | ATTTACGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGCCTCTCCTTGGAAGCTaGAGAAGAGGCTGTGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: IYENLAQRSAHWDHWAHVPLLGS*RRGCVD Trigger: ATCAACACAGCCTCTTCTGCAGCTTCCAAGGAGAGG...CACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR CCA 90 bp | GAGAGACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTCTTCTTGCAGATTCTaGAAGATGAAATCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ERLMFSPCVHNGGLQYRLSSCRF*KMKSCS Trigger: AGAGCAGGATTTCATCTTCCAGAATCTGCAAGAAGA...GAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCACATGAAAAAGTGGATGCCAGAATGTaGAACTTTCATTGTATGGTG | + |
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Preference number: 4 (lower is better) Translates to: LSMCAQWGPPVQALAHEKVDARM*NFHCMV Trigger: CACCATACAATGAAAGTTCCACATTCTGGCATCCAC...TTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | TTACGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGAAGGCACAAAGCAGCTTaGGGAATCCGGTATTACTTT | + |
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Preference number: 4 (lower is better) Translates to: LRKFSTTQRSLGSLGSRGRHKAA*GIRYYF Trigger: AAAGTAATACCGGATTCCCCAAGCTGCTTTGTGCCT...TCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR TCA 90 bp | TATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGGAGAATGTTCAGCTGACCTTCTGGATCTaGGAGCCCCACAAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: YPYNDRYQSNHLFMENVQLTFWI*EPHKIS Trigger: GCTTATTTTGTGGGGCTCTCAGATCCAGAAGGTCAG...CTGAACATTCTCCATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR GCA 90 bp | TATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGGAGAATGTTCAGCTGGGCTCACGTGGATaGCAGAATGTGGAACTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YPYNDRYQSNHLFMENVQLGSRG*QNVELS Trigger: TGAAAGTTCCACATTCTGGCATCCACGTGAGCCCAG...CTGAACATTCTCCATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | CTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCACATGAAAAATGTTCAGTTCATAAGTaGATCTTCATCATCTCACAA | + |
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Preference number: 4 (lower is better) Translates to: LSMCAQWGPPVQALAHEKCSVHK*IFIISQ Trigger: TTGTGAGATGATGAAGATCCACTTATGAACTGAACA...TTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | CGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGATGCTCTTCTTGCAGATTCTaGAAGATGAAATCTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: RKFSTTQRSLGSLGSRGCSSCRF*KMKSDK Trigger: TTTGTCAGATTTCATCTTCCAGAATCTGCAAGAAGA...GCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR CCA 90 bp | GAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGATCACTGGGCTCACGTaGATGCCAGAATGTGGAACT | + |
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Preference number: 4 (lower is better) Translates to: ELIIYPYNDRYQSNHLFMITGLT*MPECGT Trigger: AGTTCCACATTCTGGCATCCACGTGAGCCCAGTGAT...CATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | CCACCTAAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTGCTCATTGGGATCACTaGGCTCACGTGGATGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PPKFYGPPLHMNKKSLLSAHWDH*AHVDAR Trigger: TCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGC...AGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTTAGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTCAACGCAGCGCTCATTaGGATCACTGGGCTCACGTG | + |
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Preference number: 4 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPQRSAH*DHWAHV Trigger: CACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTG...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | AATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCTTTATCACCAGCAGGTaGGCCTCCATTCTAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: NKKSLLSIPTMTDTNPTTFITSR*ASILAQ Trigger: CTGTGCTAGAATGGAGGCTCACCTGCTGGTGATAAA...GGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | GAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGGCAGTTGGAACTAAATaGCTTCCAATTCTTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ELIIYPYNDRYQSNHLFMAVGTK*LPILWA Trigger: TGCCCAAAGAATTGGAAGTCATTTAGTTCCAACTGC...CATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | CACATGAATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCATTTATCACCAGCAGGTaGGCCTCCATTCTAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: HMNKKSLLSIPTMTDTNPFITSR*ASILAQ Trigger: CTGTGCTAGAATGGAGGCTCACCTGCTGGTGATAAA...TGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | CACATGAATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCACTGACCTTCTGGATCTaGGAGCCCCACAAAATAAGC | + |
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Preference number: 4 (lower is better) Translates to: HMNKKSLLSIPTMTDTNPLTFWI*EPHKIS Trigger: GCTTATTTTGTGGGGCTCTCAGATCCAGAAGGTCAG...TGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | AATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCCATCATCTCACAAACTaGCCTTTGAGGACCAAGACA | + |
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Preference number: 4 (lower is better) Translates to: NKKSLLSIPTMTDTNPTTHHLTN*PLRTKT Trigger: TGTCTTGGTCCTCAAAGGTCAGTTTGTGAGATGATG...GGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | GAATCAGTCAATGTACAGACCAATTCTCTCATAAGTAGAATAGTTGACAGACCATCAAGAGGGGTCTCATaGGAACTAAGAACCACAATA | + |
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Preference number: 4 (lower is better) Translates to: ESVNVQTNSLISRIVDRPSRGVS*ELRTTI Trigger: TATTGTGGTTCTTAGTTCTCATGAGACCCCTCTTGA...TGGTCTGTCAACTATTCTACTTATGAGAGAATTGGTCTGTACATTGACTGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR TCA 90 bp | CCACCTAAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTCACTCCAATGTTGTATaGACCAGCTCTTTTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: PPKFYGPPLHMNKKSLLSHSNVV*TSSFVV Trigger: GACTACAAAAGAGCTGGTTCATACAACATTGGAGTG...AGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTTAGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR TCA 90 bp | GAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGGTCTTGCCAAGATGCTaGTTCAGTAGAAATAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: ELIIYPYNDRYQSNHLFMVLPRC*FSRNKV Trigger: TACTTTATTTCTACTGAATCAGCATCTTGGCAAGAC...CATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | CACATGAATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAAAATCCTGCTCTTCTTaGGTGTTTATCACCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HMNKKSLLSIPTMTDTNPKSCSS*VFITSR Trigger: CCTGCTGGTGATAAACACTCAAGAAGAGCAGGATTT...TGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTAAATCCTGCTCTTCTTaGGTGTTTATCACCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPKSCSS*VFITSR Trigger: CCTGCTGGTGATAAACACTCAAGAAGAGCAGGATTT...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTGCAGATTCTGGAAGATaGAATCCTGCTCTTCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPADSGR*NPALLE Trigger: CTCAAGAAGAGCAGGATTTCATCTTCCAGAATCTGC...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | GAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGGACCTCCCTTACACATaGATAAGAAGAGCTTATTAT | + |
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Preference number: 4 (lower is better) Translates to: ELIIYPYNDRYQSNHLFMDLPYT*IRRAYY Trigger: ATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTC...CATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTAGGCACAAAGCAGCTTaGGGAATCCGGTATTACTTT | + |
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Preference number: 4 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPRHKAA*GIRYYF Trigger: AAAGTAATACCGGATTCCCCAAGCTGCTTTGTGCCT...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR GCA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTTCCTTCTCACTGTCTTaGCAAGATGCTGATTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPSFSLS*QDADSV Trigger: TACTGAATCAGCATCTTGGCAAGACAGTGAGAAGGA...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | GAATCAGTCAATGTACAGACCAATTCTCTCATAAGTAGAATAGTTGACAGACCATCTTCTTGCAGATTCTaGAAGATGAAATCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ESVNVQTNSLISRIVDRPSSCRF*KMKSCS Trigger: AGAGCAGGATTTCATCTTCCAGAATCTGCAAGAAGA...TGGTCTGTCAACTATTCTACTTATGAGAGAATTGGTCTGTACATTGACTGATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | CACATGAATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCATCACAAACTGACCTTTaGGGACCAAGACAATTAACA | + |
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Preference number: 4 (lower is better) Translates to: HMNKKSLLSIPTMTDTNPSQTDL*GPRQLT Trigger: TGTTAATTGTCTTGGTCCTCAAAGGTCAGTTTGTGA...TGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTGTCTTGCCAAGATGCTaGTTCAGTAGAAATAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPVLPRC*FSRNKV Trigger: TACTTTATTTCTACTGAATCAGCATCTTGGCAAGAC...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR TCA 90 bp | CACATGAATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAGACCTCCCTTACACATaGATAAGAAGAGCTTATTAT | + |
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Preference number: 4 (lower is better) Translates to: HMNKKSLLSIPTMTDTNPDLPYT*IRRAYY Trigger: ATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTC...TGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CCA 90 bp | GAATCAGTCAATGTACAGACCAATTCTCTCATAAGTAGAATAGTTGACAGACCATGTTCAGTTCATAAGTaGATCTTCATCATCTCACAA | + |
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Preference number: 4 (lower is better) Translates to: ESVNVQTNSLISRIVDRPCSVHK*IFIISQ Trigger: TTGTGAGATGATGAAGATCCACTTATGAACTGAACA...TGGTCTGTCAACTATTCTACTTATGAGAGAATTGGTCTGTACATTGACTGATTC 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CAA 90 bp | ATTTACGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGACAACGCAGCGCTCATaGGGATCACTGGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: IYENLAQRSAHWDHWAHVTTQRS*GSLGSR Trigger: ACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGT...CACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR CAA 90 bp | GAGAGACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCGAAATCCTGCTCTTCTaGAGTGTTTATCACCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: ERLMFSPCVHNGGLQYRLEILLF*SVYHQQ Trigger: CTGCTGGTGATAAACACTCAAGAAGAGCAGGATTTC...GAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CAA 90 bp | TTACGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTGGGCTCACGTGGAGAGGCACAAAGCAGCTaGGGGAATCCGGTATTACTT | + |
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Preference number: 5 (lower is better) Translates to: LRKFSTTQRSLGSLGSRGEAQSS*GNPVLL Trigger: AAGTAATACCGGATTCCCCAAGCTGCTTTGTGCCTC...TCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641376.1 |
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| CDS-3UTR CAA 90 bp | ACTCATGTTCTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCATCACACACTCCAATGTaGTATGAACCAGCTCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: THVLSMCAQWGPPVQALASHTPM*YEPALL Trigger: CAAAAGAGCTGGTTCATACAACATTGGAGTGTGTGA...TGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAGAACATGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR CAA 90 bp | CTCTCCATGTGTGCACAATGGGGGCCTCCAGTACAGGCTCTGGCACATGAAAAAGAAATCCTGCTCTTCTaGAGTGTTTATCACCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSMCAQWGPPVQALAHEKEILLF*SVYHQQ Trigger: CTGCTGGTGATAAACACTCAAGAAGAGCAGGATTTC...TTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCACACATGGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CAA 90 bp | GAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAACCACCTGTTCATGACAACGCAGCGCTCATaGGGATCACTGGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: ELIIYPYNDRYQSNHLFMTTQRS*GSLGSR Trigger: ACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGT...CATGAACAGGTGGTTGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS CCA 90 bp | GTGATTTACGAAAATTTAGCACAACGCAGCGCTCATTGGGATCACTaGGCTCACGTGGATGCCAGAATGTGGAACTTTCATTGTATGGTG | + |
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Preference number: 5 (lower is better) Translates to: VIYENLAQRSAHWDH*AHVDARMWNFHCMV Trigger: CACCATACAATGAAAGTTCCACATTCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAAATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229332.12 ENST00000345999.9 ENST00000352620.9 ENST00000360500.5 |
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| CDS CCA 90 bp | ATCTTTTGGGTGATTTACGAAAATTTAGCACAACGCAGCGCTCATTaGGATCACTGGGCTCACGTGGATGCCAGAATGTGGAACTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: IFWVIYENLAQRSAH*DHWAHVDARMWNFH Trigger: ATGAAAGTTCCACATTCTGGCATCCACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGTGCTAAATTTTCGTAAATCACCCAAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000229332.12 ENST00000345999.9 ENST00000352620.9 ENST00000360500.5 |
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| CDS-3UTR CAA 90 bp | GAATCAGTCAATGTACAGACCAATTCTCTCATAAGTAGAATAGTTGACAGACCAACAACGCAGCGCTCATaGGGATCACTGGGCTCACGT | + |
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Preference number: 5 (lower is better) Translates to: ESVNVQTNSLISRIVDRPTTQRS*GSLGSR Trigger: ACGTGAGCCCAGTGATCCCAATGAGCGCTGCGTTGT...TGGTCTGTCAACTATTCTACTTATGAGAGAATTGGTCTGTACATTGACTGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CAA 90 bp | CCACCTAAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTGAGGCACAAAGCAGCTaGGGGAATCCGGTATTACTT | + |
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Preference number: 5 (lower is better) Translates to: PPKFYGPPLHMNKKSLLSEAQSS*GNPVLL Trigger: AAGTAATACCGGATTCCCCAAGCTGCTTTGTGCCTC...AGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTTAGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229332.12 |
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| CDS-3UTR CAA 90 bp | AAATTCTATGGACCTCCCTTACACATGAATAAGAAGAGCTTATTATCTATCCCTATGACTTCCAATTCTTaGGGCAACAGCTCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: KFYGPPLHMNKKSLLSIPMTSNS*GNSSRL Trigger: CAGCCTGGAGCTGTTGCCCAAAGAATTGGAAGTCAT...AGGGATAGATAATAAGCTCTTCTTATTCATGTGTAAGGGAGGTCCATAGAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS-3UTR CAA 90 bp | CACATGAATAAGAAGAGCTTATTATCTATCCCTACAATGACAGATACCAATCCAATGACTTCCAATTCTTaGGGCAACAGCTCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: HMNKKSLLSIPTMTDTNPMTSNS*GNSSRL Trigger: CAGCCTGGAGCTGTTGCCCAAAGAATTGGAAGTCAT...TGGATTGGTATCTGTCATTGTAGGGATAGATAATAAGCTCTTCTTATTCATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229332.12 ENST00000345999.9 |
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| CDS CAA 72 bp | GGACCAAGACAATTAACATCATTCCAGCCCCATCTTTaGGGTGATTTACGAAAATTTAGCACAACGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GPRQLTSFQPHL*GDLRKFSTTQR Trigger: GCGCTGCGTTGTGCTAAATTTTCGTAAATCACCCAAAAGATGGGGCTGGAATGATGTTAATTGTCTTGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000229332.12 ENST00000345999.9 ENST00000352620.9 ENST00000360500.5 |
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| CDS TCA 72 bp | TCTAGCACAGTCCTTCTCACTGTCTTGCCAAGATGCTaGTTCAGTAGAAATAAAGTAGCAGTTGGAACTAAA | + |
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Preference number: 6 (lower is better) Translates to: SSTVLLTVLPRC*FSRNKVAVGTK Trigger: TTTAGTTCCAACTGCTACTTTATTTCTACTGAATCAGCATCTTGGCAAGACAGTGAGAAGGACTGTGCTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000229332.12 ENST00000345999.9 ENST00000352620.9 ENST00000360500.5 |
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