Pregenerated sensors for CLEC3B (Homo sapiens)
Ensembl gene IDs: ENSG00000163815Ensembl transcript IDs: ENST00000296130.5, ENST00000428034.1, ENST00000490386.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGTCCCCACCCTCCTAGAGCTCCATGCTGCTaGGCGGGCGGGGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEAPSARRGWGLQGPHPPRAPCC*AGGGCC Trigger: GCAGCAGCCCCCGCCCGCGCAGCAGCATGGAGCTCT...AGGAGGGTGGGGACCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR TCA 90 bp | AGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGTCCCCACCCTCCTCCCGCAGCTACTAATAAGATaGGGGCAGAAGGAACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLQAHGEDGGCKVPTLLPQLLIR*GQKEPR Trigger: CCTGGGTTCCTTCTGCCCTCATCTTATTAGTAGCTG...CGGGAGGAGGGTGGGGACCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS-3UTR GCA 90 bp | CCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAGGCGGGGGCTGCTGCTaGCTGCAGCGGGTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTLFAKRGSKRTERMGAAGGGCC*LQRVWV Trigger: GACCCAGACCCGCTGCAGGCAGCAGCAGCCCCCGCC...TGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR CCA 90 bp | CTCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGCAGGGCCACCTCCTaGGCCAGGGTGTCCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: LREAAPTLFAKRGSKRTESRATS*ARVSRR Trigger: CCGTCTGGACACCCTGGCCCAGGAGGTGGCCCTGCT...CTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGAGCAGGGCCACCTCCTaGGCCAGGGTGTCCAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: TLFAKRGSKRTERMGAARSRATS*ARVSRR Trigger: CCGTCTGGACACCCTGGCCCAGGAGGTGGCCCTGCT...CCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGTCGAACCACTTGCCGTTaGCCGCGCCTGACAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LYLQKEAPSARRGWGLQGRTTCR*PRLTGP Trigger: CGGTCCTGTCAGGCGCGGCCAACGGCAAGTGGTTCG...ACCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGCGAACCACTTGCCGTTaGCCGCGCCTGACAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: TLFAKRGSKRTERMGAARRTTCR*PRLTGP Trigger: CGGTCCTGTCAGGCGCGGCCAACGGCAAGTGGTTCG...CCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGAGCGCACGGAGAGGATaGGGGCTGCAAGGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSCTNFICKKRLQAHGESARRG*GLQGPH Trigger: GTGGGGACCTTGCAGCCCCCATCCTCTCCGTGCGCT...CTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCTGCTGCCTaGAGCGGGTCTGGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMGAAAA*SGSGSE Trigger: TTCGGACCCAGACCCGCTGCAGGCAGCAGCAGCCCC...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR CCA 90 bp | AACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGAGCGCACGGAGAGGATaGGGGCTGCAAGGTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NFICKKRLQAHGEDGGCKSARRG*GLQGPH Trigger: GTGGGGACCTTGCAGCCCCCATCCTCTCCGTGCGCT...CTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR TCA 90 bp | AACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGTTGGTGGCTCGGTGGTaGCCTGGGTCAGGAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NFICKKRLQAHGEDGGCKLVARW*PGSGGR Trigger: TCTCCCTCCTGACCCAGGTCACCACCGAGCCACCAA...CTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGTTTCAGGCAGACCGTCTaGAGGGCCTGCTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYLQKEAPSARRGWGLQGFRQTV*RACCSF Trigger: GAAGGAGCAGCAGGCCCTGCAGACGGTCTGCCTGAA...ACCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CTCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGTCCTCGCTGGCCTCGTaGAAGGTCTTCGTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LREAAPTLFAKRGSKRTESSLAS*KVFVWV Trigger: CACCCAGACGAAGACCTTCCACGAGGCCAGCGAGGA...CTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGATGCAGTCCTCGCTaGCCTCGTGGAAGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PTLFAKRGSKRTERMGAARCSPR*PRGRSS Trigger: CGAAGACCTTCCACGAGGCCAGCGAGGACTGCATCT...TGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | GCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGTCGTTGCCCACGCTCTaGCGCAGGTACTCATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAPTLFAKRGSKRTERMGSLPTL*RRYSYR Trigger: CCTGTATGAGTACCTGCGCCAGAGCGTGGGCAACGA...CCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGTTCAGGCAGACCGTCTaGAGGGCCTGCTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMFRQTV*RACCSF Trigger: GAAGGAGCAGCAGGCCCTGCAGACGGTCTGCCTGAA...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAATCTTCTTGGGCTTCTaGGTTGGTGGCTCGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLFAKRGSKRTERMGAAIFLGF*VGGSVV Trigger: CACCACCGAGCCACCAACCCAGAAGCCCAAGAAGAT...TGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR CCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGTCCTCGCTGGCCTCGTaGAAGGTCTTCGTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMSSLAS*KVFVWV Trigger: CACCCAGACGAAGACCTTCCACGAGGCCAGCGAGGA...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | GCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGATTTCATGTGCACCTTaGTCCCCTTCAGGCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: AAPTLFAKRGSKRTERMGISCAP*SPSGRP Trigger: CGGTCTGCCTGAAGGGGACCAAGGTGCACATGAAAT...CCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAATTTCATGTGCACCTTaGTCCCCTTCAGGCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PTLFAKRGSKRTERMGAAISCAP*SPSGRP Trigger: CGGTCTGCCTGAAGGGGACCAAGGTGCACATGAAAT...TGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGAGATGCAGTCCTCGCTaGCCTCGTGGAAGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMRCSPR*PRGRSS Trigger: CGAAGACCTTCCACGAGGCCAGCGAGGACTGCATCT...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGTGTCCAGACGGCTCTTaGGCTCCTCAAACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLFAKRGSKRTERMGAARCPDGS*APQTSL Trigger: CAAAGATGTTTGAGGAGCTCAAGAGCCGTCTGGACA...CCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR GCA 90 bp | CCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGTTCACAACATCTCAGTaGTTGGCTGAGTGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRSCTNFICKKRLQAHGEFTTSQ*LAECVP Trigger: GGGCACACACTCAGCCAAGCACTGAGATGTTGTGAA...CTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | CTCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGTGGAAGGTCTTCGTCTaGGTGAAGGCCAGAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LREAAPTLFAKRGSKRTEWKVFV*VKARKH Trigger: ATGCTTTCTGGCCTTCACCCAGACGAAGACCTTCCA...CTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | TCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGATGGAAGGTCTTCGTCTaGGTGAAGGCCAGAAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAKLHQLYLQKEAPSARRWKVFV*VKARKH Trigger: ATGCTTTCTGGCCTTCACCCAGACGAAGACCTTCCA...TCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CCA 90 bp | TCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGACAACATCTCAGTGCTTaGCTGAGTGTGTGCCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SAKLHQLYLQKEAPSARRQHLSA*LSVCPS Trigger: TGATGGGCACACACTCAGCCAAGCACTGAGATGTTG...TCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS-3UTR TCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGTGTCCAGACGGCTCTTaGGCTCCTCAAACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMCPDGS*APQTSL Trigger: CAAAGATGTTTGAGGAGCTCAAGAGCCGTCTGGACA...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGCTTGGCTGAGTGTGTaGCCATCACAGCTACTAATA | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMAWLSV*PSQLLI Trigger: TATTAGTAGCTGTGATGGGCACACACTCAGCCAAGC...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS-3UTR GCA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGTCCTCTCCGCGAAGCTaGACCAACTTTATTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAAPTLFAKRGSKRTERMSSPRS*TNFICK Trigger: TTTGCAAATAAAGTTGGTGCAGCTTCGCGGAGAGGA...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS TCA 90 bp | GGGCGCCGGTCATGTCCACCCAGGTGCCCTCGGCCGCCATGTCGTTaGGGCCCAGCCAGATCTCGGCCTCGTTGCCCACGCTCTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRRSCPPRCPRPPCR*GPARSRPRCPRSGA Trigger: TGCGCCAGAGCGTGGGCAACGAGGCCGAGATCTGGCTGGGCCTCAACGACATGGCGGCCGAGGGCACCTGGGTGGACATGACCGGCGCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS TCA 90 bp | CTCTGGCGCAGGTACTCATACAGGGCGTCGTTCTCCGAGCCAGTCTaGGGGGTGCCCAGGGTGCCCCCGCGCGAGATGCAGTCCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWRRYSYRASFSEPV*GVPRVPPREMQSSL Trigger: CAGCGAGGACTGCATCTCGCGCGGGGGCACCCTGGGCACCCCTCAGACTGGCTCGGAGAACGACGCCCTGTATGAGTACCTGCGCCAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS TCA 90 bp | CTGATCGCGGCAGCGCTTGTCGAACCACTTGCCGTTGGCCGCGCCTaGCAGGACCGCGCAGTTCTCGGTCTTGCCGCCATCGGGTTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LIAAALVEPLAVGRA*QDRAVLGLAAIGLR Trigger: GCGCAACCCGATGGCGGCAAGACCGAGAACTGCGCGGTCCTGTCAGGCGCGGCCAACGGCAAGTGGTTCGACAAGCGCTGCCGCGATCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS GCA 90 bp | CATACAGGGCGTCGTTCTCCGAGCCAGTCTGAGGGGTGCCCAGGGTaGCCCCGCGCGAGATGCAGTCCTCGCTGGCCTCGTGGAAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTGRRSPSQSEGCPG*PRARCSPRWPRGRS Trigger: AGACCTTCCACGAGGCCAGCGAGGACTGCATCTCGCGCGGGGGCACCCTGGGCACCCCTCAGACTGGCTCGGAGAACGACGCCCTGTATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS GCA 90 bp | GCAGGTACTCATACAGGGCGTCGTTCTCCGAGCCAGTCTGAGGGGTaGCCAGGGTGCCCCCGCGCGAGATGCAGTCCTCGCTGGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGTHTGRRSPSQSEG*PGCPRARCSPRWPR Trigger: ACGAGGCCAGCGAGGACTGCATCTCGCGCGGGGGCACCCTGGGCACCCCTCAGACTGGCTCGGAGAACGACGCCCTGTATGAGTACCTGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS GCA 90 bp | GGCAGATGTAGGGCAGCTGATCGCGGCAGCGCTTGTCGAACCACTTaGCGTTGGCCGCGCCTGACAGGACCGCGCAGTTCTCGGTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRCRAADRGSACRTT*RWPRLTGPRSSRSC Trigger: GCAAGACCGAGAACTGCGCGGTCCTGTCAGGCGCGGCCAACGGCAAGTGGTTCGACAAGCGCTGCCGCGATCAGCTGCCCTACATCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS TCA 90 bp | ACAGGACCGCGCAGTTCTCGGTCTTGCCGCCATCGGGTTGCGCGGTaGTCTCAGTCTCCCAGTTCTTGTAGGCGATGCGGGCGCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPRSSRSCRHRVAR*SQSPSSCRRCGRRS Trigger: TGACCGGCGCCCGCATCGCCTACAAGAACTGGGAGACTGAGATCACCGCGCAACCCGATGGCGGCAAGACCGAGAACTGCGCGGTCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS GCA 90 bp | TCGTGGAAGGTCTTCGTCTGGGTGAAGGCCAGAAAGCATTTCATGTaGACCTTGGTCCCCTTCAGGCAGACCGTCTGCAGGGCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SWKVFVWVKARKHFM*TLVPFRQTVCRACC Trigger: GCAGCAGGCCCTGCAGACGGTCTGCCTGAAGGGGACCAAGGTGCACATGAAATGCTTTCTGGCCTTCACCCAGACGAAGACCTTCCACGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS-3UTR CAA 90 bp | GCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGCATTTCATGTGCACCTaGGTCCCCTTCAGGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: AAPTLFAKRGSKRTERMGHFMCT*VPFRQT Trigger: GGTCTGCCTGAAGGGGACCAAGGTGCACATGAAATG...CCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS CCA 90 bp | AACATCTTTCTTGGCATTTACAATCTTCTTGGGCTTCTGGGTTGGTaGCTCGGTGGTGACCTGGGTCAGGAGGGAGAAGAGGCAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NIFLGIYNLLGLLGW*LGGDLGQEGEEAEE Trigger: CTCCTCTGCCTCTTCTCCCTCCTGACCCAGGTCACCACCGAGCCACCAACCCAGAAGCCCAAGAAGATTGTAAATGCCAAGAAAGATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS CCA 90 bp | CACAACATCTTTCTTGGCATTTACAATCTTCTTGGGCTTCTGGGTTaGTGGCTCGGTGGTGACCTGGGTCAGGAGGGAGAAGAGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: HNIFLGIYNLLGLLG*WLGGDLGQEGEEAE Trigger: CTCTGCCTCTTCTCCCTCCTGACCCAGGTCACCACCGAGCCACCAACCCAGAAGCCCAAGAAGATTGTAAATGCCAAGAAAGATGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS TCA 90 bp | CTCAGTGCTTGGCTGAGTGTGTGCCCATCACAGCTACTAATAAGATaGGGGCAGAAGGAACCCAGGTTTTCCACTCTTACAGAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSAWLSVCPSQLLIR*GQKEPRFSTLTEEA Trigger: GGCCTCCTCTGTAAGAGTGGAAAACCTGGGTTCCTTCTGCCCTCATCTTATTAGTAGCTGTGATGGGCACACACTCAGCCAAGCACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS CCA 90 bp | GTGTTCACAACATCTTTCTTGGCATTTACAATCTTCTTGGGCTTCTaGGTTGGTGGCTCGGTGGTGACCTGGGTCAGGAGGGAGAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFTTSFLAFTIFLGF*VGGSVVTWVRREKR Trigger: CCTCTTCTCCCTCCTGACCCAGGTCACCACCGAGCCACCAACCCAGAAGCCCAAGAAGATTGTAAATGCCAAGAAAGATGTTGTGAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGGTGTCCAGACGGCTCTaGAGCTCCTCAAACATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LREAAPTLFAKRGSKRTEVSRRL*SSSNIF Trigger: AAAGATGTTTGAGGAGCTCAAGAGCCGTCTGGACAC...CTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGTGTGTCCAGACGGCTCTaGAGCTCCTCAAACATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LYLQKEAPSARRGWGLQGVSRRL*SSSNIF Trigger: AAAGATGTTTGAGGAGCTCAAGAGCCGTCTGGACAC...ACCTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000296130.5 ENST00000428034.1 |
||
| CDS-3UTR CAA 90 bp | AACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGACAACATCTCAGTGCTaGGCTGAGTGTGTGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: NFICKKRLQAHGEDGGCKTTSQC*AECVPI Trigger: GATGGGCACACACTCAGCCAAGCACTGAGATGTTGT...CTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS-3UTR CAA 90 bp | GAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGCATTTACAATCTTCTaGGGCTTCTGGGTTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EAAPTLFAKRGSKRTERMAFTIF*GFWVGG Trigger: GCCACCAACCCAGAAGCCCAAGAAGATTGTAAATGC...CATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS-3UTR CAA 90 bp | CTCCGCGAAGCTGCACCAACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGGCTCCTCAAACATCTTaGTGTTCACAACATCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LREAAPTLFAKRGSKRTEAPQTS*CSQHLS Trigger: ACTGAGATGTTGTGAACACAAAGATGTTTGAGGAGC...CTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTTGGTGCAGCTTCGCGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000428034.1 |
||
| CDS-3UTR CAA 90 bp | AACTTTATTTGCAAAAAGAGGCTCCAAGCGCACGGAGAGGATGGGGGCTGCAAGGCTCCTCAAACATCTTaGTGTTCACAACATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NFICKKRLQAHGEDGGCKAPQTS*CSQHLS Trigger: AGAAAGATGTTGTGAACACAAAGATGTTTGAGGAGC...CTTGCAGCCCCCATCCTCTCCGTGCGCTTGGAGCCTCTTTTTGCAAATAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296130.5 |
||
| CDS TCA 72 bp | TCATGTCCACCCAGGTGCCCTCGGCCGCCATGTCGTTaGGGCCCAGCCAGATCTCGGCCTCGTTGCCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: SCPPRCPRPPCR*GPARSRPRCPR Trigger: GCGTGGGCAACGAGGCCGAGATCTGGCTGGGCCTCAACGACATGGCGGCCGAGGGCACCTGGGTGGACATGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS TCA 72 bp | GCAGCGCTTGTCGAACCACTTGCCGTTGGCCGCGCCTaGCAGGACCGCGCAGTTCTCGGTCTTGCCGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: AALVEPLAVGRA*QDRAVLGLAAI Trigger: GATGGCGGCAAGACCGAGAACTGCGCGGTCCTGTCAGGCGCGGCCAACGGCAAGTGGTTCGACAAGCGCTGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS CCA 72 bp | GCTGATCGCGGCAGCGCTTGTCGAACCACTTGCCGTTaGCCGCGCCTGACAGGACCGCGCAGTTCTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ADRGSACRTTCR*PRLTGPRSSRS Trigger: AGACCGAGAACTGCGCGGTCCTGTCAGGCGCGGCCAACGGCAAGTGGTTCGACAAGCGCTGCCGCGATCAGC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS CCA 72 bp | AGGCCCAGCCAGATCTCGGCCTCGTTGCCCACGCTCTaGCGCAGGTACTCATACAGGGCGTCGTTCTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPSQISASLPTL*RRYSYRASFSE Trigger: CTCGGAGAACGACGCCCTGTATGAGTACCTGCGCCAGAGCGTGGGCAACGAGGCCGAGATCTGGCTGGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS CCA 72 bp | GTGCCCCCGCGCGAGATGCAGTCCTCGCTGGCCTCGTaGAAGGTCTTCGTCTGGGTGAAGGCCAGAAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VPPREMQSSLAS*KVFVWVKARKH Trigger: ATGCTTTCTGGCCTTCACCCAGACGAAGACCTTCCACGAGGCCAGCGAGGACTGCATCTCGCGCGGGGGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS TCA 72 bp | CGCAGTTCTCGGTCTTGCCGCCATCGGGTTGCGCGGTaGTCTCAGTCTCCCAGTTCTTGTAGGCGATGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSRSCRHRVAR*SQSPSSCRRCG Trigger: CCCGCATCGCCTACAAGAACTGGGAGACTGAGATCACCGCGCAACCCGATGGCGGCAAGACCGAGAACTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS TCA 72 bp | AGTCCTCGCTGGCCTCGTGGAAGGTCTTCGTCTGGGTaGAGGCCAGAAAGCATTTCATGTGCACCTTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPRWPRGRSSSG*RPESISCAPWS Trigger: GGACCAAGGTGCACATGAAATGCTTTCTGGCCTTCACCCAGACGAAGACCTTCCACGAGGCCAGCGAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||
| CDS CCA 72 bp | ATGCAGTCCTCGCTGGCCTCGTGGAAGGTCTTCGTCTaGGTGAAGGCCAGAAAGCATTTCATGTGCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MQSSLASWKVFV*VKARKHFMCTL Trigger: CAAGGTGCACATGAAATGCTTTCTGGCCTTCACCCAGACGAAGACCTTCCACGAGGCCAGCGAGGACTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000296130.5 ENST00000428034.1 ENST00000490386.1 |
||