RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLEC2D (Homo sapiens)

Ensembl gene IDs: ENSG00000069493

Ensembl transcript IDs: ENST00000261339.10, ENST00000261340.11, ENST00000290855.11, ENST00000325960.11, ENST00000430909.5, ENST00000444971.6, ENST00000460309.1, ENST00000466035.6, ENST00000476198.2, ENST00000479877.5, ENST00000487752.1, ENST00000492359.6, ENST00000536355.5, ENST00000543300.5, ENST00000545918.5

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGTTCCTGTGCACAAGTCCCCCTGCCTGCCACCACATAAGACATaGCTTTGCTTCCCATTTGCCTTCTGTCATGATTGCAAGACCTCC +
Preference number: 1 (lower is better)
Translates to: GVPVHKSPCLPPHKT*LCFPFAFCHDCKTS
Trigger: GGAGGTCTTGCAATCATGACAGAAGGCAAATGGGAAGCAAAGTCATGTCTTATGTGGTGGCAGGCAGGGGGACTTGTGCACAGGAACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
3UTR CCA 90 bp CCAGAGGAACTAAAGACACACACACAGAAATATAGAGGTGTGAAGTaGGAAATCAGGGGTCTCACAGCCTTCAGAGCTGAGAGCCCAGAA +
Preference number: 1 (lower is better)
Translates to: PEELKTHTQKYRGVK*EIRGLTAFRAESPE
Trigger: TTCTGGGCTCTCAGCTCTGAAGGCTGTGAGACCCCTGATTTCCCACTTCACACCTCTATATTTCTGTGTGTGTGTCTTTAGTTCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR TCA 90 bp ATCCATTTCCATGGTTGGCCTTGTTCTCTGCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATATCTCAACAGGAAATTCAGTTCCTGG +
Preference number: 1 (lower is better)
Translates to: IHFHGWPCSLLSPIQ*SDGPLYLNRKFSSW
Trigger: CCAGGAACTGAATTTCCTGTTGAGATATAAAGGCCCATCTGATCACTGGATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR TCA 90 bp AGTCTACCTCACCATGACAGGTCTTGGATTCATTCGAGGAACTTGTaGAACCTTTGCAACATACAAGTTGGCACCATCTTCTTTCATGAC +
Preference number: 1 (lower is better)
Translates to: SLPHHDRSWIHSRNL*NLCNIQVGTIFFHD
Trigger: GTCATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTGAGGTAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
3UTR CCA 90 bp ATAAATGGCCTGGGACAAAGTCTACTGGGCTTGCAGAGAAGACAATaGTTTGTGAGAAAAATCTATCCAGGTGGGTTAAGAGACTTCATT +
Preference number: 1 (lower is better)
Translates to: INGLGQSLLGLQRRQ*FVRKIYPGGLRDFI
Trigger: AATGAAGTCTCTTAACCCACCTGGATAGATTTTTCTCACAAACCATTGTCTTCTCTGCAAGCCCAGTAGACTTTGTCCCAGGCCATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR TCA 90 bp AATCTGAAGATCCATGACAGGTCTTGGATTCATTCGAGGAACTTGTaGAACCTTTGCAACATACAAGTTGGCACCATCTTCTTTCATGAC +
Preference number: 1 (lower is better)
Translates to: NLKIHDRSWIHSRNL*NLCNIQVGTIFFHD
Trigger: GTCATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGTCATGGATCTTCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325960.11
3UTR CAA 90 bp AGTCCCCCTGCCTGCCACCACATAAGACATGACTTTGCTTCCCATTaGCCTTCTGTCATGATTGCAAGACCTCCCCAGCCATGTGGAACT +
Preference number: 2 (lower is better)
Translates to: SPPACHHIRHDFASH*PSVMIARPPQPCGT
Trigger: AGTTCCACATGGCTGGGGAGGTCTTGCAATCATGACAGAAGGCAAATGGGAAGCAAAGTCATGTCTTATGTGGTGGCAGGCAGGGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
3UTR CAA 90 bp ACTTCCTCCTGTGCTCTGGGAAAACAGAGGATTAAGAAACAGAGGTaGAGGAGGAGGTCAGAGAGACCTCGAGTCTTCTTTAGTTCCACC +
Preference number: 2 (lower is better)
Translates to: TSSCALGKQRIKKQR*RRRSERPRVFFSST
Trigger: GGTGGAACTAAAGAAGACTCGAGGTCTCTCTGACCTCCTCCTCAACCTCTGTTTCTTAATCCTCTGTTTTCCCAGAGCACAGGAGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR TCA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTACACAGCCTTCAGAGCTaGGAGCCCAGAACAGAGATT +
Preference number: 2 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLHSLQS*EPRTEI
Trigger: AATCTCTGTTCTGGGCTCTCAGCTCTGAAGGCTGTG...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR GCA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTAGTAATAATCTCCACATaGAAAGGGCAGGGCCAGGTG +
Preference number: 2 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLVIIST*KGQGQV
Trigger: CACCTGGCCCTGCCCTTTGCATGTGGAGATTATTAC...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR TCA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 2 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476198.2
3UTR-3UTR TCA 90 bp CAAGATCAGCATCTTGTGAGTCACAAAACCTCTGACTTGATGTCCAGTTCTTGGTCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 2 (lower is better)
Translates to: QDQHLVSHKTSDLMSSSWSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...CCAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR TCA 90 bp AGCTTTCAACCTGAGCAAGATCAGCATCTTGTGAGTCACAAAACCTCTGACTTGCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 2 (lower is better)
Translates to: SFQPEQDQHLVSHKTSDLLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...CAAGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR GCA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGGTTGGCCTTGTTCTCTaGTCAGCCCAATCCAGTGAT +
Preference number: 2 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWVGLVL*SAQSSD
Trigger: ATCACTGGATTGGGCTGAGCAGAGAACAAGGCCAAC...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
3UTR-3UTR TCA 90 bp TCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCTCTCAGACAAACATTaGGTGAAATTGTGTGAATCC +
Preference number: 2 (lower is better)
Translates to: SLCSAWHYWHLCHSNRHTLSDKH*VKLCES
Trigger: GGATTCACACAATTTCACTCAATGTTTGTCTGAGAG...AGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
3UTR-3UTR TCA 90 bp AGCTTTCAACCTGAGCAAGATCAGCATCTTGTGAGTCACAAAACCTCTGACTTGAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 2 (lower is better)
Translates to: SFQPEQDQHLVSHKTSDLSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...CAAGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR TCA 90 bp CAACAGGAAATTCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTTGGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: QQEIQFLEAFNLSKISILESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...CAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGAATTTCCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR GCA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTAAAAGTCTACTGGGCTTaGAGAGAAGACAATGGTTTG +
Preference number: 2 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLKVYWA*REDNGL
Trigger: CAAACCATTGTCTTCTCTGCAAGCCCAGTAGACTTT...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTATATAGCCATCTGATATaGTTTGGTTGTGTCTCCACC +
Preference number: 2 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLYSHLI*FGCVST
Trigger: GGTGGAGACACAACCAAACCATATCAGATGGCTATA...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp CTGAACTTAAAGCAGATAAAGGAACTTCAGAGAACTTCCTCCTGTGCTCTGGGACTTTGGGTGTATATCTaGAAAAGGGATTGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LNLKQIKELQRTSSCALGLWVYI*KRDCWL
Trigger: GAGCCAGCAATCCCTTTTCCAGATATACACCCAAAG...TCCCAGAGCACAGGAGGAAGTTCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp CTGAACTTAAAGCAGATAAAGGAACTTCAGAGAACTTCCTCCTGTGCTCTGGGATATAGAGGTGTGAAGTaGGAAATCAGGGGTCTCACA +
Preference number: 2 (lower is better)
Translates to: LNLKQIKELQRTSSCALGYRGVK*EIRGLT
Trigger: TGTGAGACCCCTGATTTCCCACTTCACACCTCTATA...TCCCAGAGCACAGGAGGAAGTTCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp ATCTCAACAGGAAATTCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATACCAATCCAGCTTTCTaGGCATGCAGCTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: ISTGNSVPGSFQPEQDQHTNPAF*ACSLKT
Trigger: TGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGT...ATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGAATTTCCTGTTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR TCA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTAGAAGACAATGGTTTGTaGGAAAAATCTATCCAGGTG +
Preference number: 2 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLEDNGL*EKSIQV
Trigger: CACCTGGATAGATTTTTCTCACAAACCATTGTCTTC...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR TCA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACCATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 2 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
3UTR-3UTR TCA 90 bp ATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCTCACATCAACCCTGTaGAATCAGGAGGACAAGTGC +
Preference number: 2 (lower is better)
Translates to: IAVTHNLSLIHQNLCSSHLTSTL*NQEDKC
Trigger: GCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAG...ATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
3UTR-3UTR CCA 90 bp TCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 2 (lower is better)
Translates to: SLCSAWHYWHLCHSNRHTLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...AGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR-3UTR CCA 90 bp GTGCAACCTTTTCATTCTATTTCAATGAAAAGCAGGCATGAACATTACTCAAGCAAGGGCAGGGCCAGGTaGAGACAATTGCTTTATGGG +
Preference number: 2 (lower is better)
Translates to: VQPFHSISMKSRHEHYSSKGRAR*RQLLYG
Trigger: CCCATAAAGCAATTGTCTCCACCTGGCCCTGCCCTT...GCTTGAGTAATGTTCATGCCTGCTTTTCATTGAAATAGAATGAAAAGGTTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp ATACTCACCCTTTGTAACTGCAACTCTGTATCTTTTGACCTGTGTCTCTGTATTCCAGCGTGGGTGTTATaGCCATCACTAACATGTCAC +
Preference number: 2 (lower is better)
Translates to: ILTLCNCNSVSFDLCLCIPAWVL*PSLTCH
Trigger: GTGACATGTTAGTGATGGCCATAACACCCACGCTGG...AATACAGAGACACAGGTCAAAAGATACAGAGTTGCAGTTACAAAGGGTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp ACAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: TGLGFIRGTCETFATYKLIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...CAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
3UTR-3UTR CCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAACACCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 2 (lower is better)
Translates to: SLGYVISSGRTGNISTMKHHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTG...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479877.5
3UTR-3UTR TCA 90 bp ATACTCACCCTTTGTAACTGCAACTCTGTATCTTTTGACCTGTGTCTCTGTATTCCACCACATAAGACATaGCTTTGCTTCCCATTTGCC +
Preference number: 2 (lower is better)
Translates to: ILTLCNCNSVSFDLCLCIPPHKT*LCFPFA
Trigger: GGCAAATGGGAAGCAAAGTCATGTCTTATGTGGTGG...AATACAGAGACACAGGTCAAAAGATACAGAGTTGCAGTTACAAAGGGTGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp GTGCAACCTTTTCATTCTATTTCAATGAAAAGCAGGCATGAACATTACTCAAGCTTTAGGGACTGGGGCTaGGGAATAGAGAGATGTTCC +
Preference number: 2 (lower is better)
Translates to: VQPFHSISMKSRHEHYSSFRDWG*GIERCS
Trigger: GGAACATCTCTCTATTCCCCAGCCCCAGTCCCTAAA...GCTTGAGTAATGTTCATGCCTGCTTTTCATTGAAATAGAATGAAAAGGTTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp TCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTTGTGAGTCACAAAAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 2 (lower is better)
Translates to: SVPGSFQPEQDQHLVSHKNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...TTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR TCA 90 bp ATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 2 (lower is better)
Translates to: MLLKISWGFAVTSRHVYLLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...CAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325960.11
3UTR-3UTR CCA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 2 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
3UTR CAA 90 bp CTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTaGGCACCATCTTCTTTCATGACTAACTGTCTTGTCCATTCAGTA +
Preference number: 2 (lower is better)
Translates to: LGFIRGTCETFATYK*APSSFMTNCLVHSV
Trigger: TACTGAATGGACAAGACAGTTAGTCATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
3UTR-3UTR TCA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACTCATAATCTTTCCCTaGTACATCAAAACCTCTGTT +
Preference number: 2 (lower is better)
Translates to: GLGFIRGTCETFATYKLALIIFP*YIKTSV
Trigger: AACAGAGGTTTTGATGTATCAGGGAAAGATTATGAG...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
3UTR-3UTR CCA 90 bp AATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAATCAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 2 (lower is better)
Translates to: NLSLIHQNLCSSHQPCEINPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...GATTTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476198.2
3UTR-3UTR TCA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGACCCAGACCAACGTTGTaGAGCTTTCTCCCTATATTT +
Preference number: 2 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRPRPTL*SFLPIF
Trigger: AAATATAGGGAGAAAGCTTCACAACGTTGGTCTGGG...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR GCA 90 bp AGCCCAGAACAGAGATTTACCCATGTATTTATTAACAGCAAGCCAGTCATTAGCCCACACTCTCACCAATaGTTGTTATTTCTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: SPEQRFTHVFINSKPVISPHSHQ*LLFLVF
Trigger: AAAGACAAGAAATAACAAGCATTGGTGAGAGTGTGG...GCTAATGACTGGCTTGCTGTTAATAAATACATGGGTAAATCTCTGTTCTGGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGACTTCCTCCTGTGCTCTaGGAAAACAGAGGATTAAGA +
Preference number: 2 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRLPPVL*ENRGLR
Trigger: TCTTAATCCTCTGTTTTCCCAGAGCACAGGAGGAAG...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR GCA 90 bp GTGCAACCTTTTCATTCTATTTCAATGAAAAGCAGGCATGAACATTACTCAAGCAACATGTCACAGTGCTaGAGAGATTTTGTTTATGGC +
Preference number: 2 (lower is better)
Translates to: VQPFHSISMKSRHEHYSSNMSQC*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGCACTGTGACATGTT...GCTTGAGTAATGTTCATGCCTGCTTTTCATTGAAATAGAATGAAAAGGTTGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CCA 90 bp ATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGCTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 2 (lower is better)
Translates to: MLLKISWGFAVTSRHVYLLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...CAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR-3UTR CCA 90 bp ATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 2 (lower is better)
Translates to: ISSNMLLKISWGFAVTSRLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...TCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR-3UTR TCA 90 bp TTATCCATTCATCTGTTAATGGTCACTTCAGTTAGTTCCGTATCTTGGCTATTAAAGCAGATATCTTTATaGGGTGGTGATTTCATTTCC +
Preference number: 2 (lower is better)
Translates to: LSIHLLMVTSVSSVSWLLKQISL*GGDFIS
Trigger: GGAAATGAAATCACCACCTCATAAAGATATCTGCTT...TAATAGCCAAGATACGGAACTAACTGAAGTGACCATTAACAGATGAATGGATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR TCA 72 bp GTGCACAAGTCCCCCTGCCTGCCACCACATAAGACATaGCTTTGCTTCCCATTTGCCTTCTGTCATGATTGC +
Preference number: 3 (lower is better)
Translates to: VHKSPCLPPHKT*LCFPFAFCHDC
Trigger: GCAATCATGACAGAAGGCAAATGGGAAGCAAAGTCATGTCTTATGTGGTGGCAGGCAGGGGGACTTGTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
3UTR CCA 72 bp TGTAGCTTAAGAACGCCTTTAAGTGGTTTTCCACCCTaGGCAGGCCAGGTGTTCCTTGCCCTCATTCCCATA +
Preference number: 3 (lower is better)
Translates to: CSLRTPLSGFPP*AGQVFLALIPI
Trigger: TATGGGAATGAGGGCAAGGAACACCTGGCCTGCCCAGGGTGGAAAACCACTTAAAGGCGTTCTTAAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR GCA 72 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTaGTCCCAGGATAGGAAACCTGTAGTCCCAGCTACT +
Preference number: 3 (lower is better)
Translates to: TGTFVIQIGTLS*SQDRKPVVPAT
Trigger: AGTAGCTGGGACTACAGGTTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
3UTR CCA 72 bp AAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAATAGGCACACTCTCCTG +
Preference number: 3 (lower is better)
Translates to: KSTSSLCSAWHY*HLCHSNRHTLL
Trigger: CAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR-3UTR CAA 90 bp CAAGATCAGCATCTTGTGAGTCACAAAACCTCTGACTTGATGTCCAGTTCTTGGTTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 3 (lower is better)
Translates to: QDQHLVSHKTSDLMSSSWFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...CCAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR TCA 72 bp GAAGTGGGAAATCAGGGGTCTCACAGCCTTCAGAGCTaGGAGCCCAGAACAGAGATTTACCCATGTATTTAT +
Preference number: 3 (lower is better)
Translates to: EVGNQGSHSLQS*EPRTEIYPCIY
Trigger: ATAAATACATGGGTAAATCTCTGTTCTGGGCTCTCAGCTCTGAAGGCTGTGAGACCCCTGATTTCCCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR TCA 72 bp AATCCAGCTTTCTGGGCATGCAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTTAGCTCTTATTGCGCT +
Preference number: 3 (lower is better)
Translates to: NPAFWACSLKTY*WLLMAVSSYCA
Trigger: AGCGCAATAAGAGCTAACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGAAAGCTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR CAA 90 bp AGATCCATGACAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 3 (lower is better)
Translates to: RSMTGLGFIRGTCETFATFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...TGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGTCATGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325960.11
3UTR-3UTR CAA 90 bp GTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACTTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 3 (lower is better)
Translates to: VLDSFEELVKPLQHTSWHFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
3UTR TCA 72 bp CTCAACAGGAAATTCAGTTCCTGGAAGCTTTCAACCTaGGCAAGATCAGCATCTTGTGAGTCACAAAACCTC +
Preference number: 3 (lower is better)
Translates to: LNRKFSSWKLST*ARSASCESQNL
Trigger: GAGGTTTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGAATTTCCTGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
3UTR-3UTR CAA 90 bp TCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 3 (lower is better)
Translates to: SLCSAWHYWHLCHSNRHTTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...AGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR-3UTR CAA 90 bp CATGATTGCAAGACCTCCCCAGCCATGTGGAACTATGAGTCAATTAAATCTCTTGACTTTGCTTCCCATTaGCCTTCTGTCATGATTGCA +
Preference number: 3 (lower is better)
Translates to: HDCKTSPAMWNYESIKSLDFASH*PSVMIA
Trigger: TGCAATCATGACAGAAGGCAAATGGGAAGCAAAGTC...AAGAGATTTAATTGACTCATAGTTCCACATGGCTGGGGAGGTCTTGCAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
3UTR-3UTR CAA 90 bp AGCGTGGGTGTTATGGCCATCACTAACATGTCACAGTGCTGCAGAGATTTTGTTCACTCTCACCAATGCTaGTTATTTCTTGTCTTTTTG +
Preference number: 3 (lower is better)
Translates to: SVGVMAITNMSQCCRDFVHSHQC*LFLVFL
Trigger: CAAAAAGACAAGAAATAACAAGCATTGGTGAGAGTG...AACAAAATCTCTGCAGCACTGTGACATGTTAGTGATGGCCATAACACCCACGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CAA 90 bp AGCCCAGAACAGAGATTTACCCATGTATTTATTAACAGCAAGCCAGTCATTAGCAGTGCTGCAGAGATTTaGTTTATGGCCAGTTTTGGG +
Preference number: 3 (lower is better)
Translates to: SPEQRFTHVFINSKPVISSAAEI*FMASFG
Trigger: CCCAAAACTGGCCATAAACAAAATCTCTGCAGCACT...GCTAATGACTGGCTTGCTGTTAATAAATACATGGGTAAATCTCTGTTCTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CAA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGAGCCAGGTGGAGACAATaGCTTTATGGGGGCAGTTTT +
Preference number: 3 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRARWRQ*LYGGSF
Trigger: AAAACTGCCCCCATAAAGCAATTGTCTCCACCTGGC...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CAA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 3 (lower is better)
Translates to: LGYVISSGRTGNISTMKTTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR-3UTR CAA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCCACCCAAATTTCACCTaGAATTGTAATAATCTCCAC +
Preference number: 3 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPHPNFT*NCNNLH
Trigger: GTGGAGATTATTACAATTCAAGGTGAAATTTGGGTG...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR-3UTR CAA 90 bp CATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAATTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 3 (lower is better)
Translates to: HNLSLIHQNLCSSHQPCEFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...TTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
3UTR-3UTR CAA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGAGACTTTGCTTCCCATTaGCCTTCTGTCATGATTGCA +
Preference number: 3 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRDFASH*PSVMIA
Trigger: TGCAATCATGACAGAAGGCAAATGGGAAGCAAAGTC...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR TCA 72 bp GATACATCAAAACCTCTGTTCCTCACATCAACCCTGTaGAATCAGGAGGACAAGTGCAATTTAATTTTGTTG +
Preference number: 3 (lower is better)
Translates to: DTSKPLFLTSTL*NQEDKCNLILL
Trigger: CAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
3UTR GCA 72 bp GTTGCATCTACTTTTGAGGTCAAATCCAAAAATTATTaGCCAGACCAACGTTGTGAAGCTTTCTCCCTATAT +
Preference number: 3 (lower is better)
Translates to: VASTFEVKSKNY*PDQRCEAFSLY
Trigger: ATATAGGGAGAAAGCTTCACAACGTTGGTCTGGGCAATAATTTTTGGATTTGACCTCAAAAGTAGATGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR CCA 72 bp GCCTTCTGTCATGATTGCAAGACCTCCCCAGCCATGTaGAACTATGAGTCAATTAAATCTCTTTTATTTATA +
Preference number: 3 (lower is better)
Translates to: AFCHDCKTSPAM*NYESIKSLLFI
Trigger: TATAAATAAAAGAGATTTAATTGACTCATAGTTCCACATGGCTGGGGAGGTCTTGCAATCATGACAGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
3UTR-3UTR CAA 90 bp GAGTCTTCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTCTCCCAATCTGTAAGTaGTCTCTTTACTCCATTAAT +
Preference number: 3 (lower is better)
Translates to: ESSLVPPVKSLYVRVSVSLPICK*SLYSIN
Trigger: ATTAATGGAGTAAAGAGACAACTTACAGATTGGGAG...AGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGAAGACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR GCA 72 bp TATATGGTAGGAGGTAAGGGTCCAATTTTATTCTTCTaGATGTGGATATACAATTTTCCCACCACCATTCAT +
Preference number: 3 (lower is better)
Translates to: YMVGGKGPILFF*MWIYNFPTTIH
Trigger: ATGAATGGTGGTGGGAAAATTGTATATCCACATGCAGAAGAATAAAATTGGACCCTTACCTCCTACCATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR CCA 72 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCTAGACATGTATATCTG +
Preference number: 3 (lower is better)
Translates to: GVISSNMLLKIS*GFAVTSRHVYL
Trigger: CAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
3UTR TCA 72 bp CAGGGTAGTAGGTTTCAGTTAAGAGGAATAAGCTTTTaGGATCTATTGCACAGCATAGTGACTATAGTTAAT +
Preference number: 3 (lower is better)
Translates to: QGSRFQLRGISF*DLLHSIVTIVN
Trigger: ATTAACTATAGTCACTATGCTGTGCAATAGATCTCAAAAGCTTATTCCTCTTAACTGAAACCTACTACCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR TCA 72 bp ATAATAAACAGGAAAGCAGATATCTTTATGAGGTGGTaGTTTCATTTCCTTTGGGTGTATATCTGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: IINRKADIFMRW*FHFLWVYIWKR
Trigger: CCTTTTCCAGATATACACCCAAAGGAAATGAAATCACCACCTCATAAAGATATCTGCTTTCCTGTTTATTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp CTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCGATGGGAGGCTCACTTaGGCCAGGGAAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LCVVPGTTGTFVIQIGTLDGRLT*AREVKA
Trigger: AGCCTTGACTTCCCTGGCTCAAGTGAGCCTCCCATC...GAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAACTCAGGAGGCTGAGATaGGAGGCTCACTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKLRRLR*EAHLSQ
Trigger: CTGGCTCAAGTGAGCCTCCCATCTCAGCCTCCTGAG...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp CTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCAAGTCAAGGCTGCAGTaGGCCACGATGGTACTACTG +
Preference number: 4 (lower is better)
Translates to: LCVVPGTTGTFVIQIGTLKSRLQ*ATMVLL
Trigger: CAGTAGTACCATCGTGGCTCACTGCAGCCTTGACTT...GAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp CTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCCCACGATGGTACTACTaGACTCCAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: LPLCVVPGTTGTFVIQIGPRWYY*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAGTAGTACCATCGTGG...GCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp CCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATACAGGGAAGTCAAGGCTaGAGTGAGCCACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: PLPLCVVPGTTGTFVIQIQGSQG*SEPRWY
Trigger: GTACCATCGTGGCTCACTGCAGCCTTGACTTCCCTG...TATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TGGAACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTTCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: WNKSTSSLCSAWHYWHLCSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAAAAGTCAAGGCTGCAGTaGGCCACGATGGTACTACTG +
Preference number: 4 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKKSRLQ*ATMVLL
Trigger: CAGTAGTACCATCGTGGCTCACTGCAGCCTTGACTT...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp CTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCCTCACATCAACCCTGTaGAATCAGGAGGACAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPLCVVPGTTGTFVIQIGLTSTL*NQEDKC
Trigger: GCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAG...GCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479877.5
CDS-3UTR TCA 90 bp AACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAGGCCATGGAAAGGGGGCTaGAGCCAAGGAGGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NPVKSGGQVQFNFVVEVRPWKGG*SQGGEP
Trigger: GGGCTCTCCTCCTTGGCTTCAGCCCCCTTTCCATGG...CCTTACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR GCA 90 bp AAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAACAAGTCCCCCTGCCTaGCACCACATAAGACATGAC +
Preference number: 4 (lower is better)
Translates to: KSTSSLCSAWHYWHLCHSTSPPA*HHIRHD
Trigger: GTCATGTCTTATGTGGTGGCAGGCAGGGGGACTTGT...TGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444971.6
CDS-3UTR GCA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAACCACGATGGTACTACTaGACTCCAGCCTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKPRWYY*TPAWVT
Trigger: TGTTACCCAGGCTGGAGTGCAGTAGTACCATCGTGG...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTATTTGCCTTCTGTCATaGTTGCAAGACCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: TNPLPLCVVPGTTGTFVIICLLS*LQDLPS
Trigger: GCTGGGGAGGTCTTGCAATCATGACAGAAGGCAAAT...AATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444971.6
CDS-3UTR TCA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACAAGTCAAGGCTGCAGTaGGCCACGATGGTACTACTG +
Preference number: 4 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDKSRLQ*ATMVLL
Trigger: CAGTAGTACCATCGTGGCTCACTGCAGCCTTGACTT...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479877.5
CDS-3UTR TCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTGATGGGAGGCTCACTTaGGCCAGGGAAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGDGRLT*AREVKA
Trigger: AGCCTTGACTTCCCTGGCTCAAGTGAGCCTCCCATC...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp CCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGTTGGCCTTGTTCTCTaGTCAGCCCAATCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PLPLCVVPGTTGTFVIQIVGLVL*SAQSSD
Trigger: ATCACTGGATTGGGCTGAGCAGAGAACAAGGCCAAC...TATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp CTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCACCAATCCAGCTTTCTaGGCATGCAGCTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: LCVVPGTTGTFVIQIGTLTNPAF*ACSLKT
Trigger: TGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGT...GAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp AACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCTCTGTGTAGTGCCTaGCACTACTGGCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: NKSTSSLCSAWHYWHLCHSLCSA*HYWHLC
Trigger: ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA...ATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACCTCAGGAGGCTGAGATaGGAGGCTCACTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLDSFEELVKPLQHTSWHLRRLR*EAHLSQ
Trigger: CTGGCTCAAGTGAGCCTCCCATCTCAGCCTCCTGAG...GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR TCA 90 bp TGGAACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: WNKSTSSLCSAWHYWHLCSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: SLCSAWHYWHLCHSNRHTLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...AGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp AGGACGGAATCACACCAGGGAGCCCCATACTGTTCTTGTCTCAAGATATCTGATTTAAGAAACAGAGGTTaGGGAGGAGGTCAGAGAGAC +
Preference number: 4 (lower is better)
Translates to: RTESHQGAPYCSCLKISDLRNRG*GGGQRD
Trigger: GTCTCTCTGACCTCCTCCTCAACCTCTGTTTCTTAA...ATCAGATATCTTGAGACAAGAACAGTATGGGGCTCCCTGGTGTGATTCCGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACCTCACATCAACCCTGTaGAATCAGGAGGACAAGTGC +
Preference number: 4 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDLTSTL*NQEDKC
Trigger: GCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAG...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
CDS-3UTR GCA 90 bp CCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATACAGACAACCTGGGTTTaGAGGCAATTCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: PLPLCVVPGTTGTFVIQIQTTWV*RQFRWC
Trigger: ACACCATCTGAATTGCCTGCAAACCCAGGTTGTCTG...TATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR GCA 90 bp AACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATCAGACAACCTGGGTTTaGAGGCAATTCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: NKSTSSLCSAWHYWHLCHQTTWV*RQFRWC
Trigger: ACACCATCTGAATTGCCTGCAAACCCAGGTTGTCTG...ATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CCA 90 bp CCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PLPLCVVPGTTGTFVIQIIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...TATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp CTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: LCVVPGTTGTFVIQIGTLSAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...GAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAACCTGTAGTCCCACACCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: VIQIGTLSCSQDRKPVVPHHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTG...TGGGACTACAGGTTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479877.5
CDS-3UTR CCA 90 bp ACCTCTGTTCCTCACATCAACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATAGCCACTCCCATTGGTaGCTGTTTAGGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TSVPHINPVKSGGQVQFNSHSHW*LFRQAL
Trigger: CAGTGCCTGCCTAAACAGCCACCAATGGGAGTGGCT...ATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAGGAACAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR TCA 90 bp CTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCCATACTGATGGCTCTTaGTGGCAGTTAGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LPLCVVPGTTGTFVIQIGHTDGS*WQLALI
Trigger: AATAAGAGCTAACTGCCATCAAGAGCCATCAGTATG...GCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp CTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCCATACTGATGGCTCTTaGTGGCAGTTAGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LCVVPGTTGTFVIQIGTLHTDGS*WQLALI
Trigger: AATAAGAGCTAACTGCCATCAAGAGCCATCAGTATG...GAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLCSAWHYWHLCHSNRHTSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...AGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTTGTGAGTCACAAATCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: SVPGSFQPEQDQHLVSHKSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...TTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR TCA 90 bp ACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TNPLPLCVVPGTTGTFVIESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...AATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCCACAGCCTTCAGAGCTaGGAGCCCAGAACAGAGATT +
Preference number: 4 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPHSLQS*EPRTEI
Trigger: AATCTCTGTTCTGGGCTCTCAGCTCTGAAGGCTGTG...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACCAGTCTACCTCACCATaGCAGGTCTTGGATTCATTC +
Preference number: 4 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDQSTSP*QVLDSF
Trigger: GAATGAATCCAAGACCTGTCATGGTGAGGTAGACTG...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
CDS-3UTR GCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAAGTCCCCCTGCCTaGCACCACATAAGACATGAC +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKTSPPA*HHIRHD
Trigger: GTCATGTCTTATGTGGTGGCAGGCAGGGGGACTTGT...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
CDS-3UTR CCA 90 bp CCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: PLPLCVVPGTTGTFVIQISAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...TATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp ACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: TNPLPLCVVPGTTGTFVISAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...AATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SLCSAWHYWHLCHSNRHTKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...AGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp AGGACGGAATCACACCAGGGAGCCCCATACTGTTCTTGTCTCAAGATATCTGATAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: RTESHQGAPYCSCLKISDKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...ATCAGATATCTTGAGACAAGAACAGTATGGGGCTCCCTGGTGTGATTCCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
CDS-3UTR TCA 90 bp GTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAACCTGTAGTCCCACACCATCTTCTTTCATaGCTAACTGTCTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VIQIGTLSCSQDRKPVVPHHLLS*LTVLSI
Trigger: AATGGACAAGACAGTTAGTCATGAAAGAAGATGGTG...TGGGACTACAGGTTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325960.11
CDS-3UTR TCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTATTTGCCTTCTGTCATaGTTGCAAGACCTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGICLLS*LQDLPS
Trigger: GCTGGGGAGGTCTTGCAATCATGACAGAAGGCAAAT...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
CDS-3UTR TCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGGATGGGAGGCTCACTTaGGCCAGGGAAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWDGRLT*AREVKA
Trigger: AGCCTTGACTTCCCTGGCTCAAGTGAGCCTCCCATC...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTGTTGGCCTTGTTCTCTaGTCAGCCCAATCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGVGLVL*SAQSSD
Trigger: ATCACTGGATTGGGCTGAGCAGAGAACAAGGCCAAC...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGTTGGCCTTGTTCTCTaGTCAGCCCAATCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTVGLVL*SAQSSD
Trigger: ATCACTGGATTGGGCTGAGCAGAGAACAAGGCCAAC...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACGAATGCTCTTTTGAATaGAGACAACCTGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDECSFE*RQPGQT
Trigger: GGTTTGCCCAGGTTGTCTGCATTCAAAAGAGCATTC...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR CCA 90 bp CTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LCVVPGTTGTFVIQIGTLNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...GAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp AGATCCATGACAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATCTCTGTGTAGTGCCTaGCACTACTGGCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: RSMTGLGFIRGTCETFATSLCSA*HYWHLC
Trigger: ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA...TGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGTCATGGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325960.11
CDS-3UTR CCA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCTTTAGGGACTGGGGCTaGGGAATAGAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPFRDWG*GIERCS
Trigger: GGAACATCTCTCTATTCCCCAGCCCCAGTCCCTAAA...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAAATCCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKIHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGAT...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325960.11
CDS-3UTR CCA 90 bp AAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGAACCTCAGGAGGCTGAGATaGGAGGCTCACTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KISWGFAVTSRHVYLIWNLRRLR*EAHLSQ
Trigger: CTGGCTCAAGTGAGCCTCCCATCTCAGCCTCCTGAG...GTTCCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp ACTTTCTTTGAAAACCAATCCAGCTTTCTGGGCATGCAGCTTGAAGACATACTGGGAGACAGAAGTGCCTaGGTTTGCAGGCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: TFFENQSSFLGMQLEDILGDRSA*VCRQFR
Trigger: TCTGAATTGCCTGCAAACCCAGGCACTTCTGTCTCC...CAGTATGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGTTTTCAAAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CCA 90 bp CAACAGGAAATTCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTTGGTGTTCTTCTTCACATaGCAGCAGGAGACAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QQEIQFLEAFNLSKISILVFFFT*QQETEV
Trigger: CACTTCTGTCTCCTGCTGCCATGTGAAGAAGAACAC...CAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGAATTTCCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR TCA 90 bp CATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAATCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: HNLSLIHQNLCSSHQPCESGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...TTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp ACAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGTCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: TGLGFIRGTCETFATYKLSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...CAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp AACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAGGTCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: NPVKSGGQVQFNFVVEVRSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...CCTTACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp TCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTTGTGAGTCACAAAGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SVPGSFQPEQDQHLVSHKESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...TTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR TCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAACTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: GLGFIRGTCETFATYKLALSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp ATCTCAACAGGAAATTCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: ISTGNSVPGSFQPEQDQHLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...ATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGAATTTCCTGTTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR TCA 90 bp ACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTAATAGAATGCTCTTTTaGATGCAGACAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: TNPLPLCVVPGTTGTFVINRMLF*MQTTWV
Trigger: AACCCAGGTTGTCTGCATTCAAAAGAGCATTCTATT...AATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR TCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACACCACCACATAAGACATaGCTTTGCTTCCCATTTGCC +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTPPHKT*LCFPFA
Trigger: GGCAAATGGGAAGCAAAGTCATGTCTTATGTGGTGG...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290855.11
ENST00000444971.6
CDS-3UTR TCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACACAGTCTACCTCACCATaGCAGGTCTTGGATTCATTC +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTQSTSP*QVLDSF
Trigger: GAATGAATCCAAGACCTGTCATGGTGAGGTAGACTG...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479877.5
CDS-3UTR TCA 90 bp AATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAATCCTCACATCAACCCTGTaGAATCAGGAGGACAAGTGC +
Preference number: 4 (lower is better)
Translates to: NLSLIHQNLCSSHQPCEILTSTL*NQEDKC
Trigger: GCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAG...GATTTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR GCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTCAGACAACCTGGGTTTaGAGGCAATTCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGQTTWV*RQFRWC
Trigger: ACACCATCTGAATTGCCTGCAAACCCAGGTTGTCTG...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR GCA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCCCAGGTGGAGACAATTaGTTTATGGGGGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPPGGDN*FMGAVF
Trigger: GAAAACTGCCCCCATAAAGCAATTGTCTCCACCTGG...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR GCA 90 bp AGCGTGGGTGTTATGGCCATCACTAACATGTCACAGTGCTGCAGAGATTTTGTTAAAGTCTACTGGGCTTaGAGAGAAGACAATGGTTTG +
Preference number: 4 (lower is better)
Translates to: SVGVMAITNMSQCCRDFVKVYWA*REDNGL
Trigger: CAAACCATTGTCTTCTCTGCAAGCCCAGTAGACTTT...AACAAAATCTCTGCAGCACTGTGACATGTTAGTGATGGCCATAACACCCACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR GCA 90 bp AGATCCATGACAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACAAACTCATTTCAAACCTaGCAATGTCCAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSMTGLGFIRGTCETFATNSFQT*QCPVWG
Trigger: GCCCCAGACTGGACATTGGCAGGTTTGAAATGAGTT...TGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGTCATGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325960.11
CDS-3UTR GCA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGAACTCATTTCAAACCTaGCAATGTCCAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWNSFQT*QCPVWG
Trigger: GCCCCAGACTGGACATTGGCAGGTTTGAAATGAGTT...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR GCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTACAGGGAAGTCAAGGCTaGAGTGAGCCACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVQGSQG*SEPRWY
Trigger: GTACCATCGTGGCTCACTGCAGCCTTGACTTCCCTG...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGCAGGGAAGTCAAGGCTaGAGTGAGCCACGATGGTAC +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWQGSQG*SEPRWY
Trigger: GTACCATCGTGGCTCACTGCAGCCTTGACTTCCCTG...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTACCAATCCAGCTTTCTaGGCATGCAGCTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGTNPAF*ACSLKT
Trigger: TGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGT...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAAAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCAATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLGFIRGTCETFATYKLAIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CCA 90 bp TGGCAGTTAGCTCTTATTGCGCTTAAAGCAGCAACCATTCCACACACTATGATTATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: WQLALIALKAATIPHTMIIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...AATCATAGTGTGTGGAATGGTTGCTGCTTTAAGCGCAATAAGAGCTAACTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CCA 90 bp AATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAATCTCTCTGTGTAGTGCCTaGCACTACTGGCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: NLSLIHQNLCSSHQPCEISLCSA*HYWHLC
Trigger: ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA...GATTTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479877.5
CDS-3UTR CCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACATCAACATTTAGGGACTaGGGCTGGGGAATAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTSTFRD*GWGIER
Trigger: TCTCTCTATTCCCCAGCCCCAGTCCCTAAATGTTGA...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCAGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLGFIRGTCETFATYKLAESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp AGCCCAGAACAGAGATTTACCCATGTATTTATTAACAGCAAGCCAGTCATTAGCCCACCACATAAGACATaGCTTTGCTTCCCATTTGCC +
Preference number: 4 (lower is better)
Translates to: SPEQRFTHVFINSKPVISPPHKT*LCFPFA
Trigger: GGCAAATGGGAAGCAAAGTCATGTCTTATGTGGTGG...GCTAATGACTGGCTTGCTGTTAATAAATACATGGGTAAATCTCTGTTCTGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCAGAAATATAGAGGTGTaGAGTGGGAAATCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPRNIEV*SGKSGV
Trigger: GACCCCTGATTTCCCACTTCACACCTCTATATTTCT...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAACCCAGACCAACGTTGTaGAGCTTTCTCCCTATATTT +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKPRPTL*SFLPIF
Trigger: AAATATAGGGAGAAAGCTTCACAACGTTGGTCTGGG...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp ACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTCAGTCTACCTCACCATaGCAGGTCTTGGATTCATTC +
Preference number: 4 (lower is better)
Translates to: THNLSLIHQNLCSSHQPCQSTSP*QVLDSF
Trigger: GAATGAATCCAAGACCTGTCATGGTGAGGTAGACTG...ACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR GCA 90 bp ATACTCACCCTTTGTAACTGCAACTCTGTATCTTTTGACCTGTGTCTCTGTATTGTAATAATCTCCACATaGAAAGGGCAGGGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILTLCNCNSVSFDLCLCIVIIST*KGQGQV
Trigger: CACCTGGCCCTGCCCTTTGCATGTGGAGATTATTAC...AATACAGAGACACAGGTCAAAAGATACAGAGTTGCAGTTACAAAGGGTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR GCA 90 bp AGGACGGAATCACACCAGGGAGCCCCATACTGTTCTTGTCTCAAGATATCTGATCCACACTCTCACCAATaGTTGTTATTTCTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RTESHQGAPYCSCLKISDPHSHQ*LLFLVF
Trigger: AAAGACAAGAAATAACAAGCATTGGTGAGAGTGTGG...ATCAGATATCTTGAGACAAGAACAGTATGGGGCTCCCTGGTGTGATTCCGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR GCA 90 bp ACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTAGGCAGGCACTGAGCTaGAGGAGTTTTTACATACTC +
Preference number: 4 (lower is better)
Translates to: THNLSLIHQNLCSSHQPCRQALS*RSFYIL
Trigger: GAGTATGTAAAAACTCCTGCAGCTCAGTGCCTGCCT...ACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR CCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTSAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTCTGTGTAGTGCCTaGCACTACTGGCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTSLCSA*HYWHLC
Trigger: ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAACTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 4 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTAAGGGCAGGGCCAGGTaGAGACAATTGCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNIKGRAR*RQLLYG
Trigger: CCCATAAAGCAATTGTCTCCACCTGGCCCTGCCCTT...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp CATGATTGCAAGACCTCCCCAGCCATGTGGAACTATGAGTCAATTAAATCTCTTTGGGACAAAGTCTACTaGGCTTGCAGAGAAGACAAT +
Preference number: 4 (lower is better)
Translates to: HDCKTSPAMWNYESIKSLWDKVY*ACREDN
Trigger: ATTGTCTTCTCTGCAAGCCCAGTAGACTTTGTCCCA...AAGAGATTTAATTGACTCATAGTTCCACATGGCTGGGGAGGTCTTGCAATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACACCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: GLGFIRGTCETFATYKLAHHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTG...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp AACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAGGAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: NPVKSGGQVQFNFVVEVRSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...CCTTACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp CTCATTTCAAACCTGCCAATGTCCAGTCTGGGGCTCTTTTTATTAAATAAAGTTTCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: LISNLPMSSLGLFLLNKVSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...AACTTTATTTAATAAAAAGAGCCCCAGACTGGACATTGGCAGGTTTGAAATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR TCA 90 bp ATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGATCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: ISSNMLLKISWGFAVTSRSGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...TCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTTCTGGGCATGCAGCTTaGAGACATACTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNISGHAA*RHTDGS
Trigger: AGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGA...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp AACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAGGGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: NPVKSGGQVQFNFVVEVRESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...CCTTACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp ATCAACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTACTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: INPVKSGGQVQFNFVVEVLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...TACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACACTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTLSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp CTGAACTTAAAGCAGATAAAGGAACTTCAGAGAACTTCCTCCTGTGCTCTGGGAAATAGAATGCTCTTTTaGATGCAGACAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LNLKQIKELQRTSSCALGNRMLF*MQTTWV
Trigger: AACCCAGGTTGTCTGCATTCAAAAGAGCATTCTATT...TCCCAGAGCACAGGAGGAAGTTCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp AGCGTGGGTGTTATGGCCATCACTAACATGTCACAGTGCTGCAGAGATTTTGTTAATGAAAAGCAGGCATaGACATTACTCAAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SVGVMAITNMSQCCRDFVNEKQA*TLLKLE
Trigger: TTCAAGCTTGAGTAATGTTCATGCCTGCTTTTCATT...AACAAAATCTCTGCAGCACTGTGACATGTTAGTGATGGCCATAACACCCACGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGGTAGGGCTGAATCTTTaGTTCTGGCCAGAACTATTT +
Preference number: 4 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWVGLNL*FWPELF
Trigger: AAATAGTTCTGGCCAGAATCAAAGATTCAGCCCTAC...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
CDS-3UTR TCA 90 bp ACCTCTGTTCCTCACATCAACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATAATAGAATGCTCTTTTaGATGCAGACAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSVPHINPVKSGGQVQFNNRMLF*MQTTWA
Trigger: TGCCCAGGTTGTCTGCATTCAAAAGAGCATTCTATT...ATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAGGAACAGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR GCA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTAACATTGTTACTGTCATaGATTTTGCCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLTLLLS*ILPPVS
Trigger: AGAAACTGGAGGCAAAATGCATGACAGTAACAATGT...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR GCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACACAGACAACCTGGGTTTaGAGGCAATTCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTQTTWV*RQFRWC
Trigger: ACACCATCTGAATTGCCTGCAAACCCAGGTTGTCTG...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR GCA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTGAATGCTCTTTTGAATaGAGACAACCTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GYVISSGRTGNISTMKTGECSFE*RQPGFA
Trigger: TGCAAACCCAGGTTGTCTGCATTCAAAAGAGCATTC...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR GCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACAGAGAACTTCCTCCTGTaGTCTGGGAAAACAGAGGAT +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTENFLL*SGKTED
Trigger: ATCCTCTGTTTTCCCAGAGCACAGGAGGAAGTTCTC...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp ATACTCACCCTTTGTAACTGCAACTCTGTATCTTTTGACCTGTGTCTCTGTATTACCAATCCAGCTTTCTaGGCATGCAGCTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: ILTLCNCNSVSFDLCLCITNPAF*ACSLKT
Trigger: TGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGT...AATACAGAGACACAGGTCAAAAGATACAGAGTTGCAGTTACAAAGGGTGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp CAACAGGAAATTCAGTTCCTGGAAGCTTTCAACCTGAGCAAGATCAGCATCTTGAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QQEIQFLEAFNLSKISILNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...CAAGATGCTGATCTTGCTCAGGTTGAAAGCTTCCAGGAACTGAATTTCCTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACAATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp ATCAACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: INPVKSGGQVQFNFVVEVIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...TACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CCA 90 bp GATTTCATTTCCTTTGGGTGTATATCTGGAAAAGGGATTGCTGGCTCATATGGTAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: DFISFGCISGKGIAGSYGSAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...ACCATATGAGCCAGCAATCCCTTTTCCAGATATACACCCAAAGGAAATGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATCTCTGTGTAGTGCCTaGCACTACTGGCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVSLCSA*HYWHLC
Trigger: ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: IAVTHNLSLIHQNLCSSHSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...ATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp GGTATAATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: GIIAVTHNLSLIHQNLCSESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...GGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAATTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp CATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: HNLSLIHQNLCSSHQPCEKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...TTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAAATAGAATGCTCTTTTaGATGCAGACAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKNRMLF*MQTTWV
Trigger: AACCCAGGTTGTCTGCATTCAAAAGAGCATTCTATT...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR TCA 90 bp GTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACCACCATCTTCTTTCATaGCTAACTGTCTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VLDSFEELVKPLQHTSWHHHLLS*LTVLSI
Trigger: AATGGACAAGACAGTTAGTCATGAAAGAAGATGGTG...GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
CDS-3UTR TCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAACATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR TCA 90 bp GTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACCATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 4 (lower is better)
Translates to: VLDSFEELVKPLQHTSWHHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAGAAGACAATGGTTTGTaGGAAAAATCTATCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKEDNGL*EKSIQV
Trigger: CACCTGGATAGATTTTTCTCACAAACCATTGTCTTC...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp CATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAGTAGGGCTGAATCTTTaGTTCTGGCCAGAACTATTT +
Preference number: 4 (lower is better)
Translates to: HNLSLIHQNLCSSHQPCEVGLNL*FWPELF
Trigger: AAATAGTTCTGGCCAGAATCAAAGATTCAGCCCTAC...TTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR TCA 90 bp GTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCACCTCTCAGACAAACATTaGGTGAAATTGTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: VLDSFEELVKPLQHTSWHLSDKH*VKLCES
Trigger: GGATTCACACAATTTCACTCAATGTTTGTCTGAGAG...GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR GCA 90 bp ATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATGCAGTTAGCTCTTATTaGTGGGTTTGCAGGCAATTC +
Preference number: 4 (lower is better)
Translates to: IAVTHNLSLIHQNLCSSHAVSSY*WVCRQF
Trigger: GAATTGCCTGCAAACCCAGCAATAAGAGCTAACTGC...ATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466035.6
CDS-3UTR GCA 90 bp TTATCCATTCATCTGTTAATGGTCACTTCAGTTAGTTCCGTATCTTGGCTATTAGTTGGCCTTGTTCTCTaGTCAGCCCAATCCAGTGAT +
Preference number: 4 (lower is better)
Translates to: LSIHLLMVTSVSSVSWLLVGLVL*SAQSSD
Trigger: ATCACTGGATTGGGCTGAGCAGAGAACAAGGCCAAC...TAATAGCCAAGATACGGAACTAACTGAAGTGACCATTAACAGATGAATGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR GCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTCAGACAACCTGGGTTTaGAGGCAATTCAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNIQTTWV*RQFRWC
Trigger: ACACCATCTGAATTGCCTGCAAACCCAGGTTGTCTG...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTAACCAATCCAGCTTTCTaGGCATGCAGCTTGAAGACA +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVTNPAF*ACSLKT
Trigger: TGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGT...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: SLGYVISSGRTGNISTMKNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNIIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGATCCATTTCCATGGTTaGCCTTGTTCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWIHFHG*PCSLLS
Trigger: GCTGAGCAGAGAACAAGGCCAACCATGGAAATGGAT...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACATCTCTGTGTAGTGCCTaGCACTACTGGCACCTTTGT +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTSLCSA*HYWHLC
Trigger: ACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGA...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CCA 90 bp GATTTCATTTCCTTTGGGTGTATATCTGGAAAAGGGATTGCTGGCTCATATGGTTATAGCCATCTGATATaGTTTGGTTGTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: DFISFGCISGKGIAGSYGYSHLI*FGCVST
Trigger: GGTGGAGACACAACCAAACCATATCAGATGGCTATA...ACCATATGAGCCAGCAATCCCTTTTCCAGATATACACCCAAAGGAAATGAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp GAGTCTTCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTCTTCCTCCTGTGCTCTaGGAAAACAGAGGATTAAGA +
Preference number: 4 (lower is better)
Translates to: ESSLVPPVKSLYVRVSVSLPPVL*ENRGLR
Trigger: TCTTAATCCTCTGTTTTCCCAGAGCACAGGAGGAAG...AGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGAAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp GGTATAATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCCACCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: GIIAVTHNLSLIHQNLCSHHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTG...GGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAATTATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTAAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTAGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: IAVTHNLSLIHQNLCSSHKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...ATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp CTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTCTCAGCCCAATCCAGTaGTCAGATGGGCCTTTATAT +
Preference number: 4 (lower is better)
Translates to: LLKISWGFAVTSRHVYLILSPIQ*SDGPLY
Trigger: ATATAAAGGCCCATCTGATCACTGGATTGGGCTGAG...AATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp CATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAACACCATCTTCTTTCATaGCTAACTGTCTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: HNLSLIHQNLCSSHQPCEHHLLS*LTVLSI
Trigger: AATGGACAAGACAGTTAGTCATGAAAGAAGATGGTG...TTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466035.6
ENST00000476198.2
CDS-3UTR TCA 90 bp ACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTCATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 4 (lower is better)
Translates to: THNLSLIHQNLCSSHQPCHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...ACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp ATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACAGGATAGGAAACCATaGCAGGTCTTGGATTCATTC +
Preference number: 4 (lower is better)
Translates to: ISSNMLLKISWGFAVTSRQDRKP*QVLDSF
Trigger: GAATGAATCCAAGACCTGTCATGGTTTCCTATCCTG...TCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261340.11
ENST00000430909.5
CDS-3UTR TCA 90 bp CATGATTGCAAGACCTCCCCAGCCATGTGGAACTATGAGTCAATTAAATCTCTTAAGCAGATATCTTTATaGGGTGGTGATTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: HDCKTSPAMWNYESIKSLKQISL*GGDFIS
Trigger: GGAAATGAAATCACCACCTCATAAAGATATCTGCTT...AAGAGATTTAATTGACTCATAGTTCCACATGGCTGGGGAGGTCTTGCAATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAAGAGGAATAAGCTTTTaGGATCTATTGCACAGCATA +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTRGISF*DLLHSI
Trigger: TATGCTGTGCAATAGATCTCAAAAGCTTATTCCTCT...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCTCATAATCTTTCCCTaGTACATCAAAACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWLIIFP*YIKTSV
Trigger: AACAGAGGTTTTGATGTATCAGGGAAAGATTATGAG...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
CDS-3UTR GCA 90 bp CTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAACATTGTTACTGTCATaGATTTTGCCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LGYVISSGRTGNISTMKTTLLLS*ILPPVS
Trigger: AGAAACTGGAGGCAAAATGCATGACAGTAACAATGT...TGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
CDS-3UTR GCA 90 bp AGCCCAGAACAGAGATTTACCCATGTATTTATTAACAGCAAGCCAGTCATTAGCCTCACCCTTTGTAACTaGAACTCTGTATCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: SPEQRFTHVFINSKPVISLTLCN*NSVSFD
Trigger: GTCAAAAGATACAGAGTTGCAGTTACAAAGGGTGAG...GCTAATGACTGGCTTGCTGTTAATAAATACATGGGTAAATCTCTGTTCTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp GGTATAATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCGTTAGCTCTTATTGCTaGGTTTGCAGGCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: GIIAVTHNLSLIHQNLCSVSSYC*VCRQFR
Trigger: TCTGAATTGCCTGCAAACCCAGCAATAAGAGCTAAC...GGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAATTATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466035.6
CDS-3UTR CCA 90 bp AACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAGGAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: NPVKSGGQVQFNFVVEVRNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...CCTTACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWSAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACAAACCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: GVISSNMLLKISWGFAVTNHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTT...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261340.11
ENST00000430909.5
CDS-3UTR CCA 90 bp GTGCAACCTTTTCATTCTATTTCAATGAAAAGCAGGCATGAACATTACTCAAGCCTTTGGGTGTATATCTaGAAAAGGGATTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQPFHSISMKSRHEHYSSLWVYI*KRDCWL
Trigger: GAGCCAGCAATCCCTTTTCCAGATATACACCCAAAG...GCTTGAGTAATGTTCATGCCTGCTTTTCATTGAAATAGAATGAAAAGGTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR CAA 72 bp ATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTaGGCACCATCTTCTTTCATGACTAACTGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: IRGTCETFATYK*APSSFMTNCLV
Trigger: GACAAGACAGTTAGTCATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
CDS-3UTR TCA 90 bp AAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGAACCATACTGATGGCTCTTaGTGGCAGTTAGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: KISWGFAVTSRHVYLIWNHTDGS*WQLALI
Trigger: AATAAGAGCTAACTGCCATCAAGAGCCATCAGTATG...GTTCCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTCATACTGATGGCTCTTaGTGGCAGTTAGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNIHTDGS*WQLALI
Trigger: AATAAGAGCTAACTGCCATCAAGAGCCATCAGTATG...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000479877.5
CDS-3UTR TCA 90 bp CTTAAAGCAGCAACCATTCCACACACTATGATTGTCAGAAACATGATTAAGAAAAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LKAATIPHTMIVRNMIKKSLKTY*WLLMAV
Trigger: AACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCT...TTTCTTAATCATGTTTCTGACAATCATAGTGTGTGGAATGGTTGCTGCTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR TCA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGAGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000479877.5
CDS-3UTR TCA 90 bp CTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTGAGTCACAAAACCTCTaGCTTGATGTCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LLKISWGFAVTSRHVYLIESQNL*LDVQFL
Trigger: CAAGAACTGGACATCAAGTCAGAGGTTTTGTGACTC...AATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: MLLKISWGFAVTSRHVYLKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...CAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNIKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGAAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: ISSNMLLKISWGFAVTSRKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...TCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp ATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 4 (lower is better)
Translates to: IAVTHNLSLIHQNLCSSHHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...ATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACACAGGATAGGAAACCATaGCAGGTCTTGGATTCATTC +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTQDRKP*QVLDSF
Trigger: GAATGAATCCAAGACCTGTCATGGTTTCCTATCCTG...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261340.11
ENST00000430909.5
CDS-3UTR TCA 90 bp AATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAATCCTCATAATCTTTCCCTaGTACATCAAAACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: NLSLIHQNLCSSHQPCEILIIFP*YIKTSV
Trigger: AACAGAGGTTTTGATGTATCAGGGAAAGATTATGAG...GATTTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR GCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTAGAATGCTCTTTTGAATaGAGACAACCTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVECSFE*RQPGFA
Trigger: TGCAAACCCAGGTTGTCTGCATTCAAAAGAGCATTC...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR GCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTGAATGCTCTTTTGAATaGAGACAACCTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSECSFE*RQPGFA
Trigger: TGCAAACCCAGGTTGTCTGCATTCAAAAGAGCATTC...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CCA 90 bp ATCAACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: INPVKSGGQVQFNFVVEVNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...TACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAAGTGCCTGGCACTACTaGCACCTTTGTCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTSAWHY*HLCHSN
Trigger: ATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACT...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTAAACCATGACAGGTCTTaGATTCATTCGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVNHDRS*IHSRNL
Trigger: CAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTT...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261340.11
ENST00000430909.5
CDS-3UTR CCA 90 bp GATTTCATTTCCTTTGGGTGTATATCTGGAAAAGGGATTGCTGGCTCATATGGTCTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 4 (lower is better)
Translates to: DFISFGCISGKGIAGSYGLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...ACCATATGAGCCAGCAATCCCTTTTCCAGATATACACCCAAAGGAAATGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CCA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGATATAGAGGTGTGAAGTaGGAAATCAGGGGTCTCACA +
Preference number: 4 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRYRGVK*EIRGLT
Trigger: TGTGAGACCCCTGATTTCCCACTTCACACCTCTATA...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp TTATCCATTCATCTGTTAATGGTCACTTCAGTTAGTTCCGTATCTTGGCTATTACATACTGATGGCTCTTaGTGGCAGTTAGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LSIHLLMVTSVSSVSWLLHTDGS*WQLALI
Trigger: AATAAGAGCTAACTGCCATCAAGAGCCATCAGTATG...TAATAGCCAAGATACGGAACTAACTGAAGTGACCATTAACAGATGAATGGATAA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000479877.5
CDS-3UTR TCA 90 bp CTTAAAGCAGCAACCATTCCACACACTATGATTGTCAGAAACATGATTAAGAAAAAGATCAGCATCTTGTaGGTCACAAAACCTCTGACT +
Preference number: 4 (lower is better)
Translates to: LKAATIPHTMIVRNMIKKKISIL*VTKPLT
Trigger: AGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTT...TTTCTTAATCATGTTTCTGACAATCATAGTGTGTGGAATGGTTGCTGCTTTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR TCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGAATAGAATGCTCTTTTaGATGCAGACAACCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWNRMLF*MQTTWV
Trigger: AACCCAGGTTGTCTGCATTCAAAAGAGCATTCTATT...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR TCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTCACCATCTTCTTTCATaGCTAACTGTCTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSHHLLS*LTVLSI
Trigger: AATGGACAAGACAGTTAGTCATGAAAGAAGATGGTG...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
CDS-3UTR TCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTCACCATCTTCTTTCATaGCTAACTGTCTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNIHHLLS*LTVLSI
Trigger: AATGGACAAGACAGTTAGTCATGAAAGAAGATGGTG...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
CDS-3UTR TCA 90 bp CTCATTTCAAACCTGCCAATGTCCAGTCTGGGGCTCTTTTTATTAAATAAAGTTCATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 4 (lower is better)
Translates to: LISNLPMSSLGLFLLNKVHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...AACTTTATTTAATAAAAAGAGCCCCAGACTGGACATTGGCAGGTTTGAAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR TCA 90 bp CTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTGTAGGGCTGAATCTTTaGTTCTGGCCAGAACTATTT +
Preference number: 4 (lower is better)
Translates to: LLKISWGFAVTSRHVYLIVGLNL*FWPELF
Trigger: AAATAGTTCTGGCCAGAATCAAAGATTCAGCCCTAC...AATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000444971.6
CDS-3UTR TCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTCTCTCAGACAAACATTaGGTGAAATTGTGTGAATCC +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSLSDKH*VKLCES
Trigger: GGATTCACACAATTTCACTCAATGTTTGTCTGAGAG...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR GCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGAATGCTCTTTTGAATaGAGACAACCTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTECSFE*RQPGFA
Trigger: TGCAAACCCAGGTTGTCTGCATTCAAAAGAGCATTC...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNINPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR TCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACACATTCGAGGAACTTGTaGAACCTTTGCAACATACAA +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTHSRNL*NLCNIQ
Trigger: TTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATG...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR TCA 90 bp CTGTTTTCTTATTTGGTGAGTCTGAACTTAAAGCAGATAAAGGAACTTCAGAGAATCTTTATGAGGTGGTaGTTTCATTTCCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LFSYLVSLNLKQIKELQRIFMRW*FHFLWV
Trigger: CACCCAAAGGAAATGAAATCACCACCTCATAAAGAT...TCTCTGAAGTTCCTTTATCTGCTTTAAGTTCAGACTCACCAAATAAGAAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR TCA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGCTCATAATCTTTCCCTaGTACATCAAAACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWLIIFP*YIKTSV
Trigger: AACAGAGGTTTTGATGTATCAGGGAAAGATTATGAG...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479877.5
CDS-3UTR GCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTACATTGTTACTGTCATaGATTTTGCCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSTLLLS*ILPPVS
Trigger: AGAAACTGGAGGCAAAATGCATGACAGTAACAATGT...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
CDS-3UTR GCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTACATTGTTACTGTCATaGATTTTGCCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNITLLLS*ILPPVS
Trigger: AGAAACTGGAGGCAAAATGCATGACAGTAACAATGT...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
CDS-3UTR CCA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAAATCCAGTGATCAGATaGGCCTTTATATCTCAACAG +
Preference number: 4 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTNPVIR*AFISQQ
Trigger: CTGTTGAGATATAAAGGCCCATCTGATCACTGGATT...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR CCA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTCTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 4 (lower is better)
Translates to: VISSNMLLKISWGFAVTSLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTACTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 4 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVLLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTCTTCTAAAGATTAGTTaGGGCTTTGCTGTAACATCT +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNILLKIS*GFAVTS
Trigger: AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR GCA 90 bp CTTAAAGCAGCAACCATTCCACACACTATGATTGTCAGAAACATGATTAAGAAAACATTGTTACTGTCATaGATTTTGCCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LKAATIPHTMIVRNMIKKTLLLS*ILPPVS
Trigger: AGAAACTGGAGGCAAAATGCATGACAGTAACAATGT...TTTCTTAATCATGTTTCTGACAATCATAGTGTGTGGAATGGTTGCTGCTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CCA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTTTATTCTTCTGCATGTaGATATACAATTTTCCCACC +
Preference number: 4 (lower is better)
Translates to: VISSGRTGNISTMKTGNILFFCM*IYNFPT
Trigger: GGTGGGAAAATTGTATATCCACATGCAGAAGAATAA...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR CAA 72 bp ATTTCATTTCCTTTGGGTGTATATCTGGAAAAGGGATaGCTGGCTCATATGGTAGTTCTCTTTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: ISFPLGVYLEKG*LAHMVVLFLIS
Trigger: AGAAATTAAAAAGAGAACTACCATATGAGCCAGCAATCCCTTTTCCAGATATACACCCAAAGGAAATGAAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290855.11
3UTR CAA 72 bp TTCATTTGTTTATTTTCACTGTGGTTGCATCTACTTTaGAGGTCAAATCCAAAAATTATTGCCCAGACCAAC +
Preference number: 4 (lower is better)
Translates to: FICLFSLWLHLL*RSNPKIIAQTN
Trigger: GTTGGTCTGGGCAATAATTTTTGGATTTGACCTCAAAAGTAGATGCAACCACAGTGAAAATAAACAAATGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS TCA 90 bp AAACCAATGACAGCCACTCCCATTGGTGGCTGTTTAGGCAGGCACTaGGCTGCAGGAGTTTTTACATACTCCAGTGGTGCCTGGAACTCC +
Preference number: 5 (lower is better)
Translates to: KPMTATPIGGCLGRH*AAGVFTYSSGAWNS
Trigger: GGAGTTCCAGGCACCACTGGAGTATGTAAAAACTCCTGCAGCTCAGTGCCTGCCTAAACAGCCACCAATGGGAGTGGCTGTCATTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS CCA 90 bp GAATGCAGACAACCTGGGCAAACCAATGACAGCCACTCCCATTGGTaGCTGTTTAGGCAGGCACTGAGCTGCAGGAGTTTTTACATACTC +
Preference number: 5 (lower is better)
Translates to: ECRQPGQTNDSHSHW*LFRQALSCRSFYIL
Trigger: GAGTATGTAAAAACTCCTGCAGCTCAGTGCCTGCCTAAACAGCCACCAATGGGAGTGGCTGTCATTGGTTTGCCCAGGTTGTCTGCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR CAA 90 bp CTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAAATAGGCGCAGACAACCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LPLCVVPGTTGTFVIQIGADNLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGGTTGTCTGC...GCCTATTTGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS CCA 90 bp TTTGAATGCAGACAACCTGGGCAAACCAATGACAGCCACTCCCATTaGTGGCTGTTTAGGCAGGCACTGAGCTGCAGGAGTTTTTACATA +
Preference number: 5 (lower is better)
Translates to: FECRQPGQTNDSHSH*WLFRQALSCRSFYI
Trigger: TATGTAAAAACTCCTGCAGCTCAGTGCCTGCCTAAACAGCCACCAATGGGAGTGGCTGTCATTGGTTTGCCCAGGTTGTCTGCATTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR CAA 90 bp TGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGACACAAAACCTCTGACTaGATGTCCAGTTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: WHYWHLCHSNRHTLLLPGHKTSD*MSSSWC
Trigger: ACACCAAGAACTGGACATCAAGTCAGAGGTTTTGTG...TCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp AATGACATAGATAAGCCTGGAGCCAAGTTCACAGTCAGTCTACCTCACCATGACTTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: NDIDKPGAKFTVSLPHHDFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...GTCATGGTGAGGTAGACTGACTGTGAACTTGGCTCCAGGCTTATCTATGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476198.2
ENST00000479877.5
CDS TCA 90 bp TTGAAAACCAATCCAGCTTTCTGGGCATGCAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTTAGCTCTTATTGCTGGGTTTGCAGG +
Preference number: 5 (lower is better)
Translates to: LKTNPAFWACSLKTY*WLLMAVSSYCWVCR
Trigger: CCTGCAAACCCAGCAATAAGAGCTAACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261339.10
ENST00000466035.6
ENST00000545918.5
CDS GCA 90 bp CGTGTTCTTCTTCACATGGCAGCAGGAGACAGAAGTGCCTGGGTTTaGAGGCAATTCAGATGGTGTAATGTCTTTCTCCACATTGTTACT +
Preference number: 5 (lower is better)
Translates to: RVLLHMAAGDRSAWV*RQFRWCNVFLHIVT
Trigger: AGTAACAATGTGGAGAAAGACATTACACCATCTGAATTGCCTGCAAACCCAGGCACTTCTGTCTCCTGCTGCCATGTGAAGAAGAACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS CCA 90 bp AGCAAACGTGTTCTTCTTCACATGGCAGCAGGAGACAGAAGTGCCTaGGTTTGCAGGCAATTCAGATGGTGTAATGTCTTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: SKRVLLHMAAGDRSA*VCRQFRWCNVFLHI
Trigger: AATGTGGAGAAAGACATTACACCATCTGAATTGCCTGCAAACCCAGGCACTTCTGTCTCCTGCTGCCATGTGAAGAAGAACACGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS CCA 90 bp ACAACAATAATGGTGGAAGAGGAAGCAAACGTGTTCTTCTTCACATaGCAGCAGGAGACAGAAGTGCCTGGGTTTGCAGGCAATTCAGAT +
Preference number: 5 (lower is better)
Translates to: TTIMVEEEANVFFFT*QQETEVPGFAGNSD
Trigger: ATCTGAATTGCCTGCAAACCCAGGCACTTCTGTCTCCTGCTGCCATGTGAAGAAGAACACGTTTGCTTCCTCTTCCACCATTATTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CAA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCGCAGACAACCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPADNLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGGTTGTCTGC...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp GGAACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCTTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: GTNPLPLCVVPGTTGTFVFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...GACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR CAA 90 bp ACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGATAGGAAAGACTTTGCTTCCCATTaGCCTTCTGTCATGATTGCA +
Preference number: 5 (lower is better)
Translates to: TGTFVIQIGTLSCSQDRKDFASH*PSVMIA
Trigger: TGCAATCATGACAGAAGGCAAATGGGAAGCAAAGTC...TTTCCTATCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444971.6
CDS-3UTR CAA 90 bp AGAAACACTTTCTTTGAAAACCAATCCAGCTTTCTGGGCATGCAGCTTGAAGACCAGAAGTGCCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: RNTFFENQSSFLGMQLEDQKCLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGGCACTTCTG...GTCTTCAAGCTGCATGCCCAGAAAGCTGGATTGGTTTTCAAAGAAAGTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CAA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAATTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: SLGYVISSGRTGNISTMKFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCATTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: GLGFIRGTCETFATYKLAFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CAA 90 bp TGGCACTACTGGCACCTTTGTCATTCAAATAGGCACACTCTCCTGCTCCCAGGAACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: WHYWHLCHSNRHTLLLPGTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...TCCTGGGAGCAGGAGAGTGTGCCTATTTGAATGACAAAGGTGCCAGTAGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp AGTGATCACCCCACCAAGCAATGGGGTATAGATGGTGATATACCCTTGTCCTTACAAAGTCTACTGGGCTaGCAGAGAAGACAATGGTTT +
Preference number: 5 (lower is better)
Translates to: SDHPTKQWGIDGDIPLSLQSLLG*QRRQWF
Trigger: AAACCATTGTCTTCTCTGCAAGCCCAGTAGACTTTG...TAAGGACAAGGGTATATCACCATCTATACCCCATTGCTTGGTGGGGTGATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp AAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCATGTAGGGCTGAATCTTaGATTCTGGCCAGAACTATT +
Preference number: 5 (lower is better)
Translates to: KSTSSLCSAWHYWHLCHSCRAES*ILARTI
Trigger: AATAGTTCTGGCCAGAATCAAAGATTCAGCCCTACA...TGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000444971.6
CDS-3UTR CAA 90 bp AACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTTTGTTGTGGAGGTAAGGTTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: NPVKSGGQVQFNFVVEVRFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...CCTTACCTCCACAACAAAATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CAA 90 bp GATTTCATTTCCTTTGGGTGTATATCTGGAAAAGGGATTGCTGGCTCATATGGTGCCAGGTGGAGACAATaGCTTTATGGGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: DFISFGCISGKGIAGSYGARWRQ*LYGGSF
Trigger: AAAACTGCCCCCATAAAGCAATTGTCTCCACCTGGC...ACCATATGAGCCAGCAATCCCTTTTCCAGATATACACCCAAAGGAAATGAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTCACAAAACCTCTGACTaGATGTCCAGTTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: GYVISSGRTGNISTMKTGHKTSD*MSSSWC
Trigger: ACACCAAGAACTGGACATCAAGTCAGAGGTTTTGTG...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp AAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTCAACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: KSTSSLCSAWHYWHLCHSTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...TGAATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp AACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: NKSTSSLCSAWHYWHLCHTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...ATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp ACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: TNPLPLCVVPGTTGTFVITCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...AATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp ACAAATCCACTTCCTCTCTGTGTAGTGCCTGGCACTACTGGCACCTTTGTCATTATGTCTTTCTCCACATaGTTACTGTCATGCATTTTG +
Preference number: 5 (lower is better)
Translates to: TNPLPLCVVPGTTGTFVIMSFST*LLSCIL
Trigger: CAAAATGCATGACAGTAACAATGTGGAGAAAGACAT...AATGACAAAGGTGCCAGTAGTGCCAGGCACTACACAGAGAGGAAGTGGATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CAA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTAGCAGACAACCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVADNLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGGTTGTCTGC...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CAA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTGCAGACAACCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: VISSNMLLKISWGFAVTSADNLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGGTTGTCTGC...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CAA 90 bp ATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGAGCAGACAACCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: ISSNMLLKISWGFAVTSRADNLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGGTTGTCTGC...TCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CAA 90 bp AGGACGGAATCACACCAGGGAGCCCCATACTGTTCTTGTCTCAAGATATCTGATCTCCCAATCTGTAAGTaGTCTCTTTACTCCATTAAT +
Preference number: 5 (lower is better)
Translates to: RTESHQGAPYCSCLKISDLPICK*SLYSIN
Trigger: ATTAATGGAGTAAAGAGACAACTTACAGATTGGGAG...ATCAGATATCTTGAGACAAGAACAGTATGGGGCTCCCTGGTGTGATTCCGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS TCA 90 bp AGGATAGGAAACCATGACAGGTCTTGGATTCATTCGAGGAACTTGTaGAACCTTTGCAACATACAAGTTGGCACCATCTTCTTTCATGAC +
Preference number: 5 (lower is better)
Translates to: RIGNHDRSWIHSRNL*NLCNIQVGTIFFHD
Trigger: GTCATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTGTCATGGTTTCCTATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261340.11
ENST00000430909.5
CDS-3UTR CAA 90 bp ATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCTCTTATTGCTGGGTTaGCAGGCAATTCAGATGGTG +
Preference number: 5 (lower is better)
Translates to: IAVTHNLSLIHQNLCSSHLLLLG*QAIQMV
Trigger: CACCATCTGAATTGCCTGCAAACCCAGCAATAAGAG...ATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466035.6
CDS-3UTR CAA 90 bp AGCCCAGAACAGAGATTTACCCATGTATTTATTAACAGCAAGCCAGTCATTAGCCACAAAACCTCTGACTaGATGTCCAGTTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: SPEQRFTHVFINSKPVISHKTSD*MSSSWC
Trigger: ACACCAAGAACTGGACATCAAGTCAGAGGTTTTGTG...GCTAATGACTGGCTTGCTGTTAATAAATACATGGGTAAATCTCTGTTCTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp TCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: SNMLLKISWGFAVTSRHVFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...TACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTTTTCCATGGTTGGCCTaGTTCTCTGCTCAGCCCAAT +
Preference number: 5 (lower is better)
Translates to: VISSGRTGNISTMKTGNIFPWLA*FSAQPN
Trigger: ATTGGGCTGAGCAGAGAACAAGGCCAACCATGGAAA...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000430909.5
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAGAACTTGTGAAACCTTaGCAACATACAAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: SLGYVISSGRTGNISTMKELVKP*QHTSWH
Trigger: GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTC...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR CAA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGGAACTTGTGAAACCTTaGCAACATACAAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWELVKP*QHTSWH
Trigger: GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTC...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CAA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCTATCTGGAAAAGGGATaGCTGGCTCATATGGTAGTT +
Preference number: 5 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPYLEKG*LAHMVV
Trigger: AACTACCATATGAGCCAGCAATCCCTTTTCCAGATA...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCATGTAGGGCTGAATCTTaGATTCTGGCCAGAACTATT +
Preference number: 5 (lower is better)
Translates to: GLGFIRGTCETFATYKLACRAES*ILARTI
Trigger: AATAGTTCTGGCCAGAATCAAAGATTCAGCCCTACA...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000476198.2
CDS-3UTR CAA 90 bp ACCTCTGTTCCTCACATCAACCCTGTGAAATCAGGAGGACAAGTGCAATTTAATTGTAGGGCTGAATCTTaGATTCTGGCCAGAACTATT +
Preference number: 5 (lower is better)
Translates to: TSVPHINPVKSGGQVQFNCRAES*ILARTI
Trigger: AATAGTTCTGGCCAGAATCAAAGATTCAGCCCTACA...ATTAAATTGCACTTGTCCTCCTGATTTCACAGGGTTGATGTGAGGAACAGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS GCA 90 bp AATAAGCGCCAAATTAAGGTAGCTTTAATAGAATGCTCTTTTGAATaGAGACAACAGTTCAGGAGGCTGGAAGTCCAAGATCAGAGTGCT +
Preference number: 5 (lower is better)
Translates to: NKRQIKVALIECSFE*RQQFRRLEVQDQSA
Trigger: AGCACTCTGATCTTGGACTTCCAGCCTCCTGAACTGTTGTCTGCATTCAAAAGAGCATTCTATTAAAGCTACCTTAATTTGGCGCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536355.5
CDS-3UTR CAA 90 bp AGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAATTACTGTCATGCATTTaGCCTCCAGTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: SLGYVISSGRTGNISTMKLLSCI*PPVSMS
Trigger: ACTCATAGAAACTGGAGGCAAAATGCATGACAGTAA...TTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCCGAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
CDS-3UTR CAA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGTTACTGTCATGCATTTaGCCTCCAGTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWLLSCI*PPVSMS
Trigger: ACTCATAGAAACTGGAGGCAAAATGCATGACAGTAA...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325960.11
CDS-3UTR CAA 90 bp AGCTTTCAACCTGAGCAAGATCAGCATCTTGTGAGTCACAAAACCTCTGACTTGATGTCTTTCTCCACATaGTTACTGTCATGCATTTTG +
Preference number: 5 (lower is better)
Translates to: SFQPEQDQHLVSHKTSDLMSFST*LLSCIL
Trigger: CAAAATGCATGACAGTAACAATGTGGAGAAAGACAT...CAAGTCAGAGGTTTTGTGACTCACAAGATGCTGATCTTGCTCAGGTTGAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS-3UTR CAA 90 bp GGGTATGTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTTTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: GYVISSGRTGNISTMKTGFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...ACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGACATACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR CAA 90 bp GGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGCATTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: GLGFIRGTCETFATYKLAFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...TGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000325960.11
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CAA 90 bp CATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTCACATCAACCCTGTGAAGAACTTGTGAAACCTTaGCAACATACAAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: HNLSLIHQNLCSSHQPCEELVKP*QHTSWH
Trigger: GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTC...TTCACAGGGTTGATGTGAGGAACAGAGGTTTTGATGTATCAGGGAAAGATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CAA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCATGTCTTTCTCCACATaGTTACTGTCATGCATTTTG +
Preference number: 5 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPMSFST*LLSCIL
Trigger: CAAAATGCATGACAGTAACAATGTGGAGAAAGACAT...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp CAGGTCTTGGATTCATTCGAGGAACTTGTGAAACCTTTGCAACATACAAGTTGGATGTCTTTCTCCACATaGTTACTGTCATGCATTTTG +
Preference number: 5 (lower is better)
Translates to: QVLDSFEELVKPLQHTSWMSFST*LLSCIL
Trigger: CAAAATGCATGACAGTAACAATGTGGAGAAAGACAT...CCAACTTGTATGTTGCAAAGGTTTCACAAGTTCCTCGAATGAATCCAAGACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR CAA 90 bp GTGCAACCTTTTCATTCTATTTCAATGAAAAGCAGGCATGAACATTACTCAAGCGACTTTGCTTCCCATTaGCCTTCTGTCATGATTGCA +
Preference number: 5 (lower is better)
Translates to: VQPFHSISMKSRHEHYSSDFASH*PSVMIA
Trigger: TGCAATCATGACAGAAGGCAAATGGGAAGCAAAGTC...GCTTGAGTAATGTTCATGCCTGCTTTTCATTGAAATAGAATGAAAAGGTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp TCTTTAGTTCCACCTGTCAAATCACTATATGTTAGGGTATCCGTTTCTGAGCCCAAATATGCTGATAACTaGCCACAATTGACAGAATGC +
Preference number: 5 (lower is better)
Translates to: SLVPPVKSLYVRVSVSEPKYADN*PQLTEC
Trigger: GCATTCTGTCAATTGTGGCAAGTTATCAGCATATTT...GGGCTCAGAAACGGATACCCTAACATATAGTGATTTGACAGGTGGAACTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp CTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTCACAAAACCTCTGACTaGATGTCCAGTTCTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LLKISWGFAVTSRHVYLIHKTSD*MSSSWC
Trigger: ACACCAAGAACTGGACATCAAGTCAGAGGTTTTGTG...AATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATTACTGTCATGCATTTaGCCTCCAGTTTCTATGAGT +
Preference number: 5 (lower is better)
Translates to: GVISSNMLLKISWGFAVTLLSCI*PPVSMS
Trigger: ACTCATAGAAACTGGAGGCAAAATGCATGACAGTAA...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
CDS-3UTR CAA 90 bp GGTATAATTGCTGTCACTCATAATCTTTCCCTGATACATCAAAACCTCTGTTCCTTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: GIIAVTHNLSLIHQNLCSFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...GGAACAGAGGTTTTGATGTATCAGGGAAAGATTATGAGTGACAGCAATTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000466035.6
ENST00000476198.2
ENST00000479877.5
CDS-3UTR CAA 90 bp CTCATTTCAAACCTGCCAATGTCCAGTCTGGGGCTCTTTTTATTAAATAAAGTTGAACTTGTGAAACCTTaGCAACATACAAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: LISNLPMSSLGLFLLNKVELVKP*QHTSWH
Trigger: GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTC...AACTTTATTTAATAAAAAGAGCCCCAGACTGGACATTGGCAGGTTTGAAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325960.11
ENST00000479877.5
CDS-3UTR CAA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAATTAAGAAACAGAGGTaGAGGAGGAGGTCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTIKKQR*RRRSER
Trigger: TCTCTCTGACCTCCTCCTCAACCTCTGTTTCTTAAT...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp GTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACCCTGTCTTGTCTaGTCCATTCAGTACCATTTA +
Preference number: 5 (lower is better)
Translates to: VISSNMLLKISWGFAVTSRPCLV*SIQYHL
Trigger: TAAATGGTACTGAATGGACAAGACAAGACAGGGTCT...AGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460309.1
CDS GCA 90 bp ATGATTAAGAAAAATAAGCGCCAAATTAAGGTAGCTTTAATAGAATaGTCTTTTGAATGCAGACAACCTGGGCAAACCAATGACAGCCAC +
Preference number: 5 (lower is better)
Translates to: MIKKNKRQIKVALIE*SFECRQPGQTNDSH
Trigger: GTGGCTGTCATTGGTTTGCCCAGGTTGTCTGCATTCAAAAGAGCATTCTATTAAAGCTACCTTAATTTGGCGCTTATTTTTCTTAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS-3UTR CAA 90 bp ATACTCACCCTTTGTAACTGCAACTCTGTATCTTTTGACCTGTGTCTCTGTATTACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: ILTLCNCNSVSFDLCLCITCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...AATACAGAGACACAGGTCAAAAGATACAGAGTTGCAGTTACAAAGGGTGAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS-3UTR CAA 90 bp GGAGTTATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACAATGTCTTTCTCCACATaGTTACTGTCATGCATTTTG +
Preference number: 5 (lower is better)
Translates to: GVISSNMLLKISWGFAVTMSFST*LLSCIL
Trigger: CAAAATGCATGACAGTAACAATGTGGAGAAAGACAT...TGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGATAACTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CAA 90 bp GTCATTAGCAGTGGGAGAACAGGTAATATTAGCACCATGAAAACAGGTAATATTTTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: VISSGRTGNISTMKTGNIFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...AATATTACCTGTTTTCATGGTGCTAATATTACCTGTTCTCCCACTGCTAATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR CAA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACAGAACTTGTGAAACCTTaGCAACATACAAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTELVKP*QHTSWH
Trigger: GTGCCAACTTGTATGTTGCAAAGGTTTCACAAGTTC...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR CAA 90 bp ATCAGTTCCAATATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGAACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: ISSNMLLKISWGFAVTSRTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...TCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCATATTGGAACTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp ATGCTTCTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGACATGTATATCTGATTaGGAACAAATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: MLLKISWGFAVTSRHVYLTCISD*EQIHFL
Trigger: GAGGAAGTGGATTTGTTCCAAATCAGATATACATGT...CAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAGAAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000444971.6
ENST00000460309.1
ENST00000479877.5
CDS-3UTR CAA 90 bp CTAAAGATTAGTTGGGGCTTTGCTGTAACATCTAGACATGTATATCTGATTTGGATGTCTTTCTCCACATaGTTACTGTCATGCATTTTG +
Preference number: 5 (lower is better)
Translates to: LKISWGFAVTSRHVYLIWMSFST*LLSCIL
Trigger: CAAAATGCATGACAGTAACAATGTGGAGAAAGACAT...CCAAATCAGATATACATGTCTAGATGTTACAGCAAAGCCCCAACTAATCTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
CDS-3UTR CAA 90 bp TCTTTTATTTATAAATTACTCAGTCTCGGGTATGTCATTAGCAGTGGGAGAACATTTGCAACATACAAGTaGGCACCATCTTCTTTCATG +
Preference number: 5 (lower is better)
Translates to: SFIYKLLSLGYVISSGRTFATYK*APSSFM
Trigger: CATGAAAGAAGATGGTGCCAACTTGTATGTTGCAAA...TGTTCTCCCACTGCTAATGACATACCCGAGACTGAGTAATTTATAAATAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261340.11
ENST00000325960.11
ENST00000430909.5
ENST00000479877.5
CDS-3UTR CAA 90 bp TTATCCATTCATCTGTTAATGGTCACTTCAGTTAGTTCCGTATCTTGGCTATTACACCCAAATTTCACCTaGAATTGTAATAATCTCCAC +
Preference number: 5 (lower is better)
Translates to: LSIHLLMVTSVSSVSWLLHPNFT*NCNNLH
Trigger: GTGGAGATTATTACAATTCAAGGTGAAATTTGGGTG...TAATAGCCAAGATACGGAACTAACTGAAGTGACCATTAACAGATGAATGGATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290855.11
CDS CCA 72 bp AGACAACCTGGGCAAACCAATGACAGCCACTCCCATTaGTGGCTGTTTAGGCAGGCACTGAGCTGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: RQPGQTNDSHSH*WLFRQALSCRS
Trigger: ACTCCTGCAGCTCAGTGCCTGCCTAAACAGCCACCAATGGGAGTGGCTGTCATTGGTTTGCCCAGGTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS TCA 72 bp ACAGCCACTCCCATTGGTGGCTGTTTAGGCAGGCACTaGGCTGCAGGAGTTTTTACATACTCCAGTGGTGCC +
Preference number: 6 (lower is better)
Translates to: TATPIGGCLGRH*AAGVFTYSSGA
Trigger: GGCACCACTGGAGTATGTAAAAACTCCTGCAGCTCAGTGCCTGCCTAAACAGCCACCAATGGGAGTGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS GCA 72 bp CACTCCCATTGGTGGCTGTTTAGGCAGGCACTGAGCTaGAGGAGTTTTTACATACTCCAGTGGTGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: HSHWWLFRQALS*RSFYILQWCLE
Trigger: TTCCAGGCACCACTGGAGTATGTAAAAACTCCTGCAGCTCAGTGCCTGCCTAAACAGCCACCAATGGGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS GCA 72 bp ACAACAGTTCAGGAGGCTGGAAGTCCAAGATCAGAGTaGTGGCAGATTTGGTGCCTGGTAAGGGCCCACTTT +
Preference number: 6 (lower is better)
Translates to: TTVQEAGSPRSE*WQIWCLVRAHF
Trigger: AAAGTGGGCCCTTACCAGGCACCAAATCTGCCAGCACTCTGATCTTGGACTTCCAGCCTCCTGAACTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536355.5
CDS CCA 72 bp ATGGTGGAAGAGGAAGCAAACGTGTTCTTCTTCACATaGCAGCAGGAGACAGAAGTGCCTGGGTTTGCAGGC +
Preference number: 6 (lower is better)
Translates to: MVEEEANVFFFT*QQETEVPGFAG
Trigger: GCCTGCAAACCCAGGCACTTCTGTCTCCTGCTGCCATGTGAAGAAGAACACGTTTGCTTCCTCTTCCACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492359.6
CDS CAA 90 bp AACAGTTCAGGAGGCTGGAAGTCCAAGATCAGAGTGCTGGCAGATTaGGTGCCTGGTAAGGGCCCACTTTCTGGTTCATTGATGGTAACT +
Preference number: 6 (lower is better)
Translates to: NSSGGWKSKIRVLAD*VPGKGPLSGSLMVT
Trigger: AGTTACCATCAATGAACCAGAAAGTGGGCCCTTACCAGGCACCAAATCTGCCAGCACTCTGATCTTGGACTTCCAGCCTCCTGAACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536355.5
CDS TCA 72 bp AATCCAGCTTTCTGGGCATGCAGCTTGAAGACATACTaGTGGCTCTTGATGGCAGTTAGCTCTTATTGCTGG +
Preference number: 6 (lower is better)
Translates to: NPAFWACSLKTY*WLLMAVSSYCW
Trigger: CCAGCAATAAGAGCTAACTGCCATCAAGAGCCATCAGTATGTCTTCAAGCTGCATGCCCAGAAAGCTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261339.10
ENST00000466035.6
ENST00000545918.5
CDS TCA 72 bp TTCACAGGAAAACATATCCTTGTAGGGCTGAATCTTTaGTTCTGGCCAGAACTATTTTCTTACCAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: FTGKHILVGLNL*FWPELFSYQFL
Trigger: CAGGAACTGGTAAGAAAATAGTTCTGGCCAGAATCAAAGATTCAGCCCTACAAGGATATGTTTTCCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000325960.11
ENST00000444971.6
ENST00000476198.2
ENST00000536355.5
CDS GCA 72 bp AAAAATAAGCGCCAAATTAAGGTAGCTTTAATAGAATaGTCTTTTGAATGCAGACAACCTGGGTTTGCAGGC +
Preference number: 6 (lower is better)
Translates to: KNKRQIKVALIE*SFECRQPGFAG
Trigger: GCCTGCAAACCCAGGTTGTCTGCATTCAAAAGAGCATTCTATTAAAGCTACCTTAATTTGGCGCTTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261340.11
ENST00000290855.11
ENST00000325960.11
ENST00000444971.6
ENST00000479877.5
ENST00000543300.5
CDS CAA 90 bp GAATGCAGACAACCTGTAAGAAATAAGTTCCAGATTGGACAGCTATaGCCTTTATCAAATAGAAATGAAGTTGCATTAGGACTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: ECRQPVRNKFQIGQL*PLSNRNEVALGLSS
Trigger: GGAACTCAGTCCTAATGCAACTTCATTTCTATTTGATAAAGGCAATAGCTGTCCAATCTGGAACTTATTTCTTACAGGTTGTCTGCATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487752.1
CDS GCA 72 bp AAAAATAAGCGCCAAATTAAGGTAGCTTTAATAGAATaGTCTTTTGAATGCAGACAACCTGGGCAAACCAAT +
Preference number: 6 (lower is better)
Translates to: KNKRQIKVALIE*SFECRQPGQTN
Trigger: ATTGGTTTGCCCAGGTTGTCTGCATTCAAAAGAGCATTCTATTAAAGCTACCTTAATTTGGCGCTTATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476198.2
CDS CAA 72 bp CAACCTGTAAGAAATAAGTTCCAGATTGGACAGCTATaGCCTTTATCAAATAGAAATGAAGTTGCATTAGGA +
Preference number: 6 (lower is better)
Translates to: QPVRNKFQIGQL*PLSNRNEVALG
Trigger: TCCTAATGCAACTTCATTTCTATTTGATAAAGGCAATAGCTGTCCAATCTGGAACTTATTTCTTACAGGTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487752.1