Pregenerated sensors for CLEC1B (Homo sapiens)
Ensembl gene IDs: ENSG00000165682Ensembl transcript IDs: ENST00000298527.10, ENST00000348658.4, ENST00000398937.6, ENST00000428126.6
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGGAAGGGGGCTTGTATAGTTTGTGCAGCAGAGCATTCTCAGTaGAATACAGATCCCGGCCCAGTGGGATGCCAAAATGACGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: RGKGACIVCAAEHSQ*NTDPGPVGCQNDGE Trigger: CTCTCCGTCATTTTGGCATCCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATACAAGCCCCCTTCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCTTACAATCTTCTGCCCCCTCCTCTTCTGTGACAGTAGCTGGGCCTAGAGGCTTGTATAGTTTGTaGAGCAGAGCATTCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QPLQSSAPSSSVTVAGPRGLYSL*SRAFSV Trigger: CACTGAGAATGCTCTGCTGCACAAACTATACAAGCC...TCTAGGCCCAGCTACTGTCACAGAAGAGGAGGGGGCAGAAGATTGTAAGGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| 3UTR TCA 72 bp | GGGGCTTGTATAGTTTGTGCAGCAGAGCATTCTCAGTaGAATACAGATCCCGGCCCAGTGGGATGCCAAAAT | + |
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Preference number: 3 (lower is better) Translates to: GACIVCAAEHSQ*NTDPGPVGCQN Trigger: ATTTTGGCATCCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATACAAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| 3UTR-3UTR CAA 90 bp | ATAGATATGTTTATCTCCATAACTCATAACTGGGAGTATTATACCCAAGAGGCTGGGGGCTTGTATAGTTaGTGCAGCAGAGCATTCTCA | + |
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Preference number: 3 (lower is better) Translates to: IDMFISITHNWEYYTQEAGGLYS*CSRAFS Trigger: TGAGAATGCTCTGCTGCACAAACTATACAAGCCCCC...AGCCTCTTGGGTATAATACTCCCAGTTATGAGTTATGGAGATAAACATATCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR TCA 90 bp | TCTGCCCCCTCCTCTTCTGTGACAGTAGCTGGGCCTAGAGGGAAGGGGGCTTGTAATGAGTCCTGGCTTTaGTGTACTCCACAATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SAPSSSVTVAGPRGKGACNESWL*CTPQCS Trigger: GGAACATTGTGGAGTACATCAAAGCCAGGACTCATT...ACAAGCCCCCTTCCCTCTAGGCCCAGCTACTGTCACAGAAGAGGAGGGGGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR CCA 90 bp | TATAGTTTGTGCAGCAGAGCATTCTCAGTGAAATACAGATCCCGGCCCAGTGGGCAGATCCCGGCCCAGTaGGATGCCAAAATGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: YSLCSRAFSVKYRSRPSGQIPAQ*DAKMTE Trigger: CTCCGTCATTTTGGCATCCCACTGGGCCGGGATCTG...CCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR GCA 90 bp | CAGAGCATTCTCAGTGAAATACAGATCCCGGCCCAGTGGGATGCCAAAATGACGGCCCTTACAATCTTCTaGCCCCTCCTCTTCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: QSILSEIQIPAQWDAKMTALTIF*PLLFCD Trigger: GTCACAGAAGAGGAGGGGGCAGAAGATTGTAAGGGC...CGTCATTTTGGCATCCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR CCA 90 bp | AAACCAGCCCTTACAATCTTCTGCCCCCTCCTCTTCTGTGACAGTAGCTGGGCCAACCCCTCCTTGATTTaGAGGTTTGACCTTGACCTA | + |
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Preference number: 4 (lower is better) Translates to: KPALTIFCPLLFCDSSWANPSLI*RFDLDL Trigger: TAGGTCAAGGTCAAACCTCCAAATCAAGGAGGGGTT...GGCCCAGCTACTGTCACAGAAGAGGAGGGGGCAGAAGATTGTAAGGGCTGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR TCA 90 bp | TATAGTTTGTGCAGCAGAGCATTCTCAGTGAAATACAGATCCCGGCCCAGTGGGGGTTTTCATATTTTCTaGGATAACCGAGCCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: YSLCSRAFSVKYRSRPSGGFHIF*DNRAIL Trigger: GAGGATGGCTCGGTTATCTCAGAAAATATGAAAACC...CCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR GCA 90 bp | AGGGAAGGGGGCTTGTATAGTTTGTGCAGCAGAGCATTCTCAGTGAAATACAGAGGCTTGTATAGTTTGTaGAGCAGAGCATTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: REGGLYSLCSRAFSVKYRGLYSL*SRAFSV Trigger: CACTGAGAATGCTCTGCTGCACAAACTATACAAGCC...TCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATACAAGCCCCCTTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR TCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGCCTCAGTCTTCCCACTaGGTAACATCAGCATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLPQSSH*VTSAFE Trigger: CTCAAATGCTGATGTTACTCAGTGGGAAGACTGAGG...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGACCTCATTCGACTTCTaGCGAGATAATCCGACCCAA | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLTSFDF*RDNPTQ Trigger: TTGGGTCGGATTATCTCGCCAGAAGTCGAATGAGGT...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR GCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGTCCTGTCCACCTCTTTaGATTAAGGTAGTTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLSCPPL*IKVVGP Trigger: TGGACCAACTACCTTAATGCAAAGAGGTGGACAGGA...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR TCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGCTCAAACATATTTTCTaGGATAACCGAGCCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLLKHIF*DNRAIL Trigger: GAGGATGGCTCGGTTATCTCAGAAAATATGTTTGAG...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR TCA 90 bp | ATAGATATGTTTATCTCCATAACTCATAACTGGGAGTATTATACCCAAGAGGCTGCAGAGCATTCTCAGTaGAATACAGATCCCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: IDMFISITHNWEYYTQEAAEHSQ*NTDPGP Trigger: TGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGC...AGCCTCTTGGGTATAATACTCCCAGTTATGAGTTATGGAGATAAACATATCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR CCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGATTGCTTTATTGTGGTaGTCTGGAACTGAACCCACA | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLIALLW*SGTEPT Trigger: TGTGGGTTCAGTTCCAGACCACCACAATAAAGCAAT...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR TCA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCCCCGAGTACTGCAACTaGGCTCAGAGTTCAATGACT | + |
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Preference number: 4 (lower is better) Translates to: NRTIGKQMINSRDGFCIFPEYCN*AQSSMT Trigger: AGTCATTGAACTCTGAGCTCAGTTGCAGTACTCGGG...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CCA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCCATCTTCATCCTGCATaGCTTCCCGAGTACTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: NRTIGKQMINSRDGFCIFHLHPA*LPEYCN Trigger: GTTGCAGTACTCGGGAAGCCATGCAGGATGAAGATG...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGAGCGGAGATGAGAGCTaGTTTCCGAGTTTTAATATT | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLSGDES*FPSFNI Trigger: AATATTAAAACTCGGAAACCAGCTCTCATCTCCGCT...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR TCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGCTGTCTAGTAGCCTCTaGAACTTAAGAAGCATTTAT | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLLSSSL*NLRSIY Trigger: ATAAATGCTTCTTAAGTTTCAGAGGCTACTAGACAG...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR GCA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCTATCCATCTTCATCCTaGATGGCTTCCCGAGTACTG | + |
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Preference number: 4 (lower is better) Translates to: NRTIGKQMINSRDGFCIFYPSSS*MASRVL Trigger: CAGTACTCGGGAAGCCATGCAGGATGAAGATGGATA...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CCA 90 bp | ATAGATATGTTTATCTCCATAACTCATAACTGGGAGTATTATACCCAAGAGGCTACCTCATTCGACTTCTaGCGAGATAATCCGACCCAA | + |
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Preference number: 4 (lower is better) Translates to: IDMFISITHNWEYYTQEATSFDF*RDNPTQ Trigger: TTGGGTCGGATTATCTCGCCAGAAGTCGAATGAGGT...AGCCTCTTGGGTATAATACTCCCAGTTATGAGTTATGGAGATAAACATATCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR TCA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCAATGAGTCCTGGCTTTaGTGTACTCCACAATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: NRTIGKQMINSRDGFCIFNESWL*CTPQCS Trigger: GGAACATTGTGGAGTACATCAAAGCCAGGACTCATT...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR GCA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGCTTTATTGCAATAATTaGTTTATTGTGGTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLLYCNN*FIVVVW Trigger: CCAGACCACCACAATAAAGCAATTATTGCAATAAAG...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CCA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCCTGCTCAGAGATACATaGACATTTCAGGATTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NRTIGKQMINSRDGFCIFLLRDT*TFQDSA Trigger: AGCAGAATCCTGAAATGTCCATGTATCTCTGAGCAG...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CAA 90 bp | TATAGTTTGTGCAGCAGAGCATTCTCAGTGAAATACAGATCCCGGCCCAGTGGGGGGGGCTTGTATAGTTaGTGCAGCAGAGCATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: YSLCSRAFSVKYRSRPSGGGLYS*CSRAFS Trigger: TGAGAATGCTCTGCTGCACAAACTATACAAGCCCCC...CCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATA 50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR CAA 90 bp | CAGAGCATTCTCAGTGAAATACAGATCCCGGCCCAGTGGGATGCCAAAATGACGTTTTGTAACCCCTCCTaGATTTGGAGGTTTGACCTT | + |
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Preference number: 5 (lower is better) Translates to: QSILSEIQIPAQWDAKMTFCNPS*IWRFDL Trigger: AAGGTCAAACCTCCAAATCAAGGAGGGGTTACAAAA...CGTCATTTTGGCATCCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS-3UTR CAA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCGGTAGTTGGTCCACCTaGGTCATGCCAGCCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: NRTIGKQMINSRDGFCIFGSWST*VMPAFL Trigger: GAGGAAGGCTGGCATGACCAAGGTGGACCAACTACC...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CAA 90 bp | TATAGTTTGTGCAGCAGAGCATTCTCAGTGAAATACAGATCCCGGCCCAGTGGGAGAAAGCAACTAAACTaGTTTTACCAGCTGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: YSLCSRAFSVKYRSRPSGRKQLN*FYQLFR Trigger: CCTAAACAGCTGGTAAAACAAGTTTAGTTGCTTTCT...CCCACTGGGCCGGGATCTGTATTTCACTGAGAATGCTCTGCTGCACAAACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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| CDS GCA 90 bp | GGTTTCCGAGTTTTAATATTTAAGGTGATGTATCCATCTTCATCCTaGATGGCTTCCCGAGTACTGCAACTGAGCTCAGAGTTCAATGAC | + |
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Preference number: 5 (lower is better) Translates to: GFRVLIFKVMYPSSS*MASRVLQLSSEFND Trigger: GTCATTGAACTCTGAGCTCAGTTGCAGTACTCGGGAAGCCATGCAGGATGAAGATGGATACATCACCTTAAATATTAAAACTCGGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298527.10 ENST00000348658.4 ENST00000428126.6 |
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| CDS-3UTR CAA 90 bp | GGTAAGAGAATAGTGAATGGGGAAGTCATAGTGTTCGCTTTCATGGAGTTTCTGGCAATAATTGCTTTATaGTGGTGGTCTGGAACTGAA | + |
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Preference number: 5 (lower is better) Translates to: GKRIVNGEVIVFAFMEFLAIIAL*WWSGTE Trigger: TTCAGTTCCAGACCACCACAATAAAGCAATTATTGC...CAGAAACTCCATGAAAGCGAACACTATGACTTCCCCATTCACTATTCTCTTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS-3UTR CAA 90 bp | AATAGAACAATTGGGAAGCAAATGATAAACTCACGTGATGGCTTCTGTATATTCGTTTTCCTTTGCTTATaGTTTTCCAGGAAGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: NRTIGKQMINSRDGFCIFVFLCL*FSRKLL Trigger: AAGAAGCTTCCTGGAAAACAATAAGCAAAGGAAAAC...GAATATACAGAAGCCATCACGTGAGTTTATCATTTGCTTCCCAATTGTTCTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428126.6 |
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| CDS TCA 72 bp | GTGAAATACAGATCCCGGCCCAGTGGGATGCCAAAATaGCGGAGAGCCACATCTCTGATCTTCAAAATATCA | + |
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Preference number: 6 (lower is better) Translates to: VKYRSRPSGMPK*RRATSLIFKIS Trigger: TGATATTTTGAAGATCAGAGATGTGGCTCTCCGTCATTTTGGCATCCCACTGGGCCGGGATCTGTATTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398937.6 |
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