RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLEC16A (Homo sapiens)

Ensembl gene IDs: ENSG00000038532

Ensembl transcript IDs: ENST00000261657.5, ENST00000409552.4, ENST00000409790.6, ENST00000428742.6, ENST00000436973.5, ENST00000459723.1, ENST00000463459.1, ENST00000463896.5, ENST00000465491.5, ENST00000476025.5, ENST00000487189.5, ENST00000494853.1, ENST00000646363.1

Found 1134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCGCAGAGCAGGGAAATGGTGGGCTGCCGGGCAGGGACGAGGCTaGGGGACAGGCTGGCTGTCTCCACGGCTGCGCTCCTGGCCACGT +
Preference number: 1 (lower is better)
Translates to: PRRAGKWWAAGQGRG*GTGWLSPRLRSWPR
Trigger: ACGTGGCCAGGAGCGCAGCCGTGGAGACAGCCAGCCTGTCCCCCAGCCTCGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCTGCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR GCA 90 bp CCCGGCACTGACTCAGTCCTCAGCGGTGCCCACAGGCTCAGCACATaGAGCCTCTTCGCCCACGGGCTCTGTGCAGGCGGCAGCCGGCGT +
Preference number: 1 (lower is better)
Translates to: PGTDSVLSGAHRLST*SLFAHGLCAGGSRR
Trigger: ACGCCGGCTGCCGCCTGCACAGAGCCCGTGGGCGAAGAGGCTGCATGTGCTGAGCCTGTGGGCACCGCTGAGGACTGAGTCAGTGCCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR TCA 90 bp GTCCTGCCACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTaGGTGGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCT +
Preference number: 1 (lower is better)
Translates to: VLPPGAQRHGAQAAP*VAGAVICIRRGVSA
Trigger: AGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGTGGCAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp ACCAGAGAGGTGAGGGGCCGCTGGCCCTGGTGGACTTGGGGAGGGTaGATCACGGCCTGGGCTGTGAGTGCTGTGTCTGGCTCCCGAGCT +
Preference number: 1 (lower is better)
Translates to: TREVRGRWPWWTWGG*ITAWAVSAVSGSRA
Trigger: AGCTCGGGAGCCAGACACAGCACTCACAGCCCAGGCCGTGATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTCTCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GGTCCCTACCAGCGGGGCCACACACACAAAGGGAGGCCCCGGCACTaGCTCAGTCCTCAGCGGTGCCCACAGGCTCAGCACATGCAGCCT +
Preference number: 1 (lower is better)
Translates to: GPYQRGHTHKGRPRH*LSPQRCPQAQHMQP
Trigger: AGGCTGCATGTGCTGAGCCTGTGGGCACCGCTGAGGACTGAGTCAGTGCCGGGGCCTCCCTTTGTGTGTGTGGCCCCGCTGGTAGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR TCA 90 bp AGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTaGCCTGCTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGC +
Preference number: 1 (lower is better)
Translates to: RLALPAWGSASAGPI*PAGTGTLHVQKGTS
Trigger: GCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp AGCCCCCACTGTGGGCCTTCCCACACTCCTGGCTCTTCCTCTGGATaGCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: SPHCGPSHTPGSSSG*QGPSVSCLDWPVWE
Trigger: CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGAAGAGCCAGGAGTGTGGGAAGGCCCACAGTGGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp GGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTaGTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACC +
Preference number: 1 (lower is better)
Translates to: GPSCLGERLSWPHLT*WDRYLARPERDEHT
Trigger: GGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp ACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTaGGGTCCCTACCAGCGGGGCCACACACACAAAGGGAGGCCCCGG +
Preference number: 1 (lower is better)
Translates to: TEWWVLPVCLASQRH*GPYQRGHTHKGRPR
Trigger: CCGGGGCCTCCCTTTGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp AAGGTCTCACCAGTGACCAGAGAGGTGAGGGGCCGCTGGCCCTGGTaGACTTGGGGAGGGTGGATCACGGCCTGGGCTGTGAGTGCTGTG +
Preference number: 1 (lower is better)
Translates to: KVSPVTREVRGRWPW*TWGGWITAWAVSAV
Trigger: CACAGCACTCACAGCCCAGGCCGTGATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTCTCTGGTCACTGGTGAGACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp TGGAAGGTCTCACCAGTGACCAGAGAGGTGAGGGGCCGCTGGCCCTaGTGGACTTGGGGAGGGTGGATCACGGCCTGGGCTGTGAGTGCT +
Preference number: 1 (lower is better)
Translates to: WKVSPVTREVRGRWP*WTWGGWITAWAVSA
Trigger: AGCACTCACAGCCCAGGCCGTGATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTCTCTGGTCACTGGTGAGACCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCATaGAGTGAGCTGCAGGCTGTTCCTCCTGGTCACGCCTTGGGGTGG +
Preference number: 1 (lower is better)
Translates to: AQRLLTAGWWPTRVA*SELQAVPPGHALGW
Trigger: CCACCCCAAGGCGTGACCAGGAGGAACAGCCTGCAGCTCACTCCATGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp AAGCCAAGGTTTGGGAGTTCCTGCGGCCAGCCCTGCTCCCTGACTTaGCAAACCCAGCCGGAGGTGCACAGGGGAAGGGTGGACCAGGGC +
Preference number: 1 (lower is better)
Translates to: KPRFGSSCGQPCSLT*QTQPEVHRGRVDQG
Trigger: GCCCTGGTCCACCCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTaGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCC +
Preference number: 1 (lower is better)
Translates to: PSCLGERLSWPHLTC*DRYLARPERDEHTS
Trigger: GGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTaGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAA +
Preference number: 1 (lower is better)
Translates to: AMVKAGPSCLGERLS*PHLTCWDRYLARPE
Trigger: TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GGGCCGGATGGGTCTGTGGGGGCTGACCTCAGACCTCTGAGGCTATaGCCTGAGTGTCAGAAGCCACAGCCCCCACTGTGGGCCTTCCCA +
Preference number: 1 (lower is better)
Translates to: GPDGSVGADLRPLRL*PECQKPQPPLWAFP
Trigger: TGGGAAGGCCCACAGTGGGGGCTGTGGCTTCTGACACTCAGGTCATAGCCTCAGAGGTCTGAGGTCAGCCCCCACAGACCCATCCGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp CAGAGGAGCCATATGACAGAGGAAGAAAGAGGTGCCGGTGGGTCCTaGCACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAG +
Preference number: 1 (lower is better)
Translates to: QRSHMTEEERGAGGS*HPGLRDTEPRQLPE
Trigger: CTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCTTCCTCTGTCATATGGCTCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp AGCTCTGGGGACACCATGCCCTTGCAGCTGGAGGGGAACTGGCTCTaGGCCATCTCTCGGCACATGTGGGCACACACAGTCGAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: SSGDTMPLQLEGNWL*AISRHMWAHTVEGR
Trigger: CCTGCCCTCGACTGTGTGTGCCCACATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp GATAGGTGGTTGAGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTaGTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACC +
Preference number: 1 (lower is better)
Translates to: DRWLRWLLGAAQNGG*SQCVLPVSGTGVPT
Trigger: GGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp ATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGTTGTaGAAGGTCTCACCAGTGACCAGAGAGGTGAGGGGCCGCTGGCCC +
Preference number: 1 (lower is better)
Translates to: MPLVGTSAGRSGGKL*KVSPVTREVRGRWP
Trigger: GGGCCAGCGGCCCCTCACCTCTCTGGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp CAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATaGGGTTTGACGGGAGCTCCTGAAGACATAGCTGTGCCCACTGCC +
Preference number: 1 (lower is better)
Translates to: QRVLSGLACLGAPQL*GLTGAPEDIAVPTA
Trigger: GGCAGTGGGCACAGCTATGTCTTCAGGAGCTCCCGTCAAACCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp ATTCAAAGCCAAGGTTTGGGAGTTCCTGCGGCCAGCCCTGCTCCCTaGCTTGGCAAACCCAGCCGGAGGTGCACAGGGGAAGGGTGGACC +
Preference number: 1 (lower is better)
Translates to: IQSQGLGVPAASPAP*LGKPSRRCTGEGWT
Trigger: GGTCCACCCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp CGTCTGGCAGGGCTGCGCTTCTTCACCTGCCCCTTAGGTTGCTTGTaGACGCAAGTGTCTGGGTTGTGGGAGGCTGCCAAGGCTCCGGGA +
Preference number: 1 (lower is better)
Translates to: RLAGLRFFTCPLGCL*TQVSGLWEAAKAPG
Trigger: TCCCGGAGCCTTGGCAGCCTCCCACAACCCAGACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTGAAGAAGCGCAGCCCTGCCAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp TCCCCCTCCTTGGCAGGACTGTGTTTCCTTCATGAGGTTGAAAACTaGCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGA +
Preference number: 1 (lower is better)
Translates to: SPSLAGLCFLHEVEN*PRQALPGQLAGPRR
Trigger: TCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCCTGCCAAGGAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GGGGCTTCTTCCCATTCAAGGGAGCGCAGGGATAGGTGGTTGAGATaGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTC +
Preference number: 1 (lower is better)
Translates to: GASSHSRERRDRWLR*LLGAAQNGGCSQCV
Trigger: GACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTCCCTTGAATGGGAAGAAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GGACAACGTGGGGCTTCTTCCCATTCAAGGGAGCGCAGGGATAGGTaGTTGAGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCC +
Preference number: 1 (lower is better)
Translates to: GQRGASSHSRERRDR*LRWLLGAAQNGGCS
Trigger: GGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTCCCTTGAATGGGAAGAAGCCCCACGTTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp ACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGAGGGGAACTaGCTCTGGGCCATCTCTCGGCACATGTGGGCACACACAGTCGAG +
Preference number: 1 (lower is better)
Translates to: TQSSGDTMPLQLEGN*LWAISRHMWAHTVE
Trigger: CTCGACTGTGTGTGCCCACATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTaGAGGGGAACTGGCTCTGGGCCATCTCTCGGCACATGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: ESDRLRALGTPCPCS*RGTGSGPSLGTCGH
Trigger: GTGCCCACATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GCGCTTCTTCACCTGCCCCTTAGGTTGCTTGTGAACGCAAGTGTCTaGGTTGTGGGAGGCTGCCAAGGCTCCGGGAGAGGGACTGGGCTG +
Preference number: 1 (lower is better)
Translates to: ALLHLPLRLLVNASV*VVGGCQGSGRGTGL
Trigger: CAGCCCAGTCCCTCTCCCGGAGCCTTGGCAGCCTCCCACAACCCAGACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTGAAGAAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTaGAGCTGGAGGGGAACTGGCTCTGGGCCATCTCTCGGCACATGT +
Preference number: 1 (lower is better)
Translates to: QRESDRLRALGTPCP*SWRGTGSGPSLGTC
Trigger: ACATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTaGGGACACCATGCCCTTGCAGCTGGAGGGGAACTGGCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: QISSSSRGRVTDSEL*GHHALAAGGELALG
Trigger: GCCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTaGCAGGTCTGGAGGAAAGTTGTGGAAGGTCTCACCAGTGACCAG +
Preference number: 1 (lower is better)
Translates to: ARLRRIPNAPGGHIC*QVWRKVVEGLTSDQ
Trigger: CTGGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp ATGCAGGTGGCAAAAGATCTCAGCGCGGCTCCCGAGACTACCCTATaGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGCACATCT +
Preference number: 1 (lower is better)
Translates to: MQVAKDLSAAPETTL*PGSGGYLMPLVGTS
Trigger: AGATGTGCCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGAGCCGCGCTGAGATCTTTTGCCACCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp ATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGCACATCTaGTGGCAGGTCTGGAGGAAAGTTGTGGAAGGTCTCACCAGTGAC +
Preference number: 1 (lower is better)
Translates to: MARLRRIPNAPGGHI*WQVWRKVVEGLTSD
Trigger: GTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CCTGAAGACATAGCTGTGCCCACTGCCGCTGAGACCTGGGTGAGGTaGGGTCCTTTGAAGCCAAAATGGCTGGTGGCCTCCAATGGGCTG +
Preference number: 1 (lower is better)
Translates to: PEDIAVPTAAETWVR*GPLKPKWLVASNGL
Trigger: CAGCCCATTGGAGGCCACCAGCCATTTTGGCTTCAAAGGACCCCACCTCACCCAGGTCTCAGCGGCAGTGGGCACAGCTATGTCTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp TGGTCCTCCCAGTCACCTTTAATCCTCTGCTGGTCCTCCCGGGCATaGTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCAGTG +
Preference number: 1 (lower is better)
Translates to: WSSQSPLILCWSSRA*CPALTKTSLLQCSV
Trigger: CACTGAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGACTGGGAGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp CAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGGCCAGCCCTaGTCCCTGACTTGGCAAACCCAGCCGGAGGTGCACAGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: QQYSKPRFGSSCGQP*SLTWQTQPEVHRGR
Trigger: CCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTaGAGGAAAGTTGTGGAAGGTCTCACCAGTGACCAGAGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: RRIPNAPGGHICWQV*RKVVEGLTSDQRGE
Trigger: CTCACCTCTCTGGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CACCCTGCCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTaGTCGTGGTTTGTCCTTCCTTTGGGTTTCTGCCCATGTGGCCCC +
Preference number: 1 (lower is better)
Translates to: HPAFLLFQGFCRWPR*SWFVLPLGFCPCGP
Trigger: GGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGGCAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp TGGGCCATCTCTCGGCACATGTGGGCACACACAGTCGAGGGCAGGTaGCGTAGAGGGTGTCTTCCTTTGATTTCCATCATGGCCACAGGG +
Preference number: 1 (lower is better)
Translates to: WAISRHMWAHTVEGR*RRGCLPLISIMATG
Trigger: CCCTGTGGCCATGATGGAAATCAAAGGAAGACACCCTCTACGTCACCTGCCCTCGACTGTGTGTGCCCACATGTGCCGAGAGATGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp CTCCACGGCTGCGCTCCTGGCCACGTTCTTGCTGGGCTTAGAGTCTaGTTCCGTTTCGTTGACGATTACCAACTGGTCAGGAAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: LHGCAPGHVLAGLRV*FRFVDDYQLVRKVR
Trigger: CCTCACCTTCCTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR GCA 90 bp GACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTaGCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTT +
Preference number: 1 (lower is better)
Translates to: DCVSFMRLKTALGRP*RDSWLGRGDRDHVL
Trigger: AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp GTGTCTTTTATCCTCCGCTGGTCCTCCCAGTCACCTTTAATCCTCTaGTGGTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCT +
Preference number: 1 (lower is better)
Translates to: VSFILRWSSQSPLIL*WSSRACCPALTKTS
Trigger: AGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGACTGGGAGGACCAGCGGAGGATAAAAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp AGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTaGGGCCAGCCCTGCTCCCTGACTTGGCAAACCCAGCCGGAGGTG +
Preference number: 1 (lower is better)
Translates to: STPPQQYSKPRFGSS*GQPCSLTWQTQPEV
Trigger: CACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp GGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTaGACGTCCAGAAAGGGACGAGCACACCTCCACAACAATATTCAA +
Preference number: 1 (lower is better)
Translates to: GAPQLAPSDLLGQVP*TSRKGRAHLHNNIQ
Trigger: TTGAATATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp TCTTTTATCCTCCGCTGGTCCTCCCAGTCACCTTTAATCCTCTGCTaGTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTC +
Preference number: 1 (lower is better)
Translates to: SFILRWSSQSPLILC*SSRACCPALTKTSL
Trigger: GAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGACTGGGAGGACCAGCGGAGGATAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GACTGCCCTTTTCTTGGCCAGGGATGCAGGGTAGAAGCCCTGCCCTaGGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAGTCACCTTTA +
Preference number: 1 (lower is better)
Translates to: DCPFLGQGCRVEALP*AVSFILRWSSQSPL
Trigger: TAAAGGTGACTGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTGCATCCCTGGCCAAGAAAAGGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CTGAGTGGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTaGTCCCAGCCTGCACGTGAAGAGATGCAAAGTGAAAAAGGAATT +
Preference number: 1 (lower is better)
Translates to: LSGRCSHLHSPRCLR*SQPAREEMQSEKGI
Trigger: AATTCCTTTTTCACTTTGCATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCCACTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp TGGCTGGGCCGAGGAGACAGAGACCATGTTCTTCTAAAATGCAGGTaGCAAAAGATCTCAGCGCGGCTCCCGAGACTACCCTATGGCCAG +
Preference number: 1 (lower is better)
Translates to: WLGRGDRDHVLLKCR*QKISARLPRLPYGQ
Trigger: CTGGCCATAGGGTAGTCTCGGGAGCCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAGAACATGGTCTCTGTCTCCTCGGCCCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp TTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTaGCTGGGCCGAGGAGACAGAGACCATGTTCTTCTAAAATGCAGG +
Preference number: 1 (lower is better)
Translates to: FMRLKTALGRPCRDS*LGRGDRDHVLLKCR
Trigger: CCTGCATTTTAGAAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GCCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTaGTTTGTCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCT +
Preference number: 1 (lower is better)
Translates to: AFLLFQGFCRWPRWS*FVLPLGFCPCGPLS
Trigger: AGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GGTGAGGTGGGGTCCTTTGAAGCCAAAATGGCTGGTGGCCTCCAATaGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: GEVGSFEAKMAGGLQ*AGSQTSLHKQSFWE
Trigger: CTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCCATTGGAGGCCACCAGCCATTTTGGCTTCAAAGGACCCCACCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp CATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTaGCAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: HGVSIFRSAAVAEGE*QTQSSGDTMPLQLE
Trigger: CTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp GACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTCTAAAATaGAGGTGGCAAAAGATCTCAGCGCGGCTCCCGAGACTACCCTAT +
Preference number: 1 (lower is better)
Translates to: DSWLGRGDRDHVLLK*RWQKISARLPRLPY
Trigger: ATAGGGTAGTCTCGGGAGCCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GAAAGGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTaGGAGTTCCTGCGGCCAGCCCTGCTCCCTGACTTGGCAAACCCA +
Preference number: 1 (lower is better)
Translates to: ERDEHTSTTIFKAKV*EFLRPALLPDLANP
Trigger: TGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GGGTCCTTGCTTGTACACACCCAGTCCGAATGGGGAAGGGAACCATaGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTG +
Preference number: 1 (lower is better)
Translates to: GSLLVHTQSEWGREP*GFHIQISSSSRGRV
Trigger: CACTCTCCCTCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTGTACAAGCAAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GTTCCAGTTTTCATTTCCACCCTCGTGTTCAGTACCCACGAAGCATaGGTCATGCTGGCGAAAGCAGGTACTTCCCTAGAGCGGTCCCGA +
Preference number: 1 (lower is better)
Translates to: VPVFISTLVFSTHEA*VMLAKAGTSLERSR
Trigger: TCGGGACCGCTCTAGGGAAGTACCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAAATGAAAACTGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 90 bp GTCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTaGGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATG +
Preference number: 1 (lower is better)
Translates to: VLPLGFCPCGPLSEL*VFSMEAKVLVPAAM
Trigger: CATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GTGGTTTGTCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTaGGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGC +
Preference number: 1 (lower is better)
Translates to: VVCPSFGFLPMWPPF*AVRFLYGSKGPCTC
Trigger: GCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GATTTCCATCATGGCCACAGGGTCGGGAGTCTTCACGGTCCCAACTaGTTCCTTCTTAGAGATGGTAACACTGAAGAAGGTGCTGGAAGC +
Preference number: 1 (lower is better)
Translates to: DFHHGHRVGSLHGPN*FLLRDGNTEEGAGS
Trigger: GCTTCCAGCACCTTCTTCAGTGTTACCATCTCTAAGAAGGAACCAGTTGGGACCGTGAAGACTCCCGACCCTGTGGCCATGATGGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp GTGTCTGATGCATCTGGGTCCTTGCTTGTACACACCCAGTCCGAATaGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGT +
Preference number: 1 (lower is better)
Translates to: VSDASGSLLVHTQSE*GREPWGFHIQISSS
Trigger: ACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTGTACAAGCAAGGACCCAGATGCATCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GAGTCTGCTTCCGTTTCGTTGACGATTACCAACTGGTCAGGAAGGTaGGGCTTAGGCAGTTCTGGACTCATGGGGGCATCTGAATTGACT +
Preference number: 1 (lower is better)
Translates to: ESASVSLTITNWSGR*GLGSSGLMGASELT
Trigger: AGTCAATTCAGATGCCCCCATGAGTCCAGAACTGCCTAAGCCTCACCTTCCTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR GCA 90 bp CTCCTTTTCCTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTaGTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACC +
Preference number: 1 (lower is better)
Translates to: LLFLEKSFHDGRPLG*YSRKPFSPLSSVCT
Trigger: GGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAGGAAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 90 bp GGAAGGGGAGAACTCGGTCTTCTGGAGAAGTGGTCCTTTCCACTCTaGCAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGA +
Preference number: 1 (lower is better)
Translates to: GRGELGLLEKWSFPL*QISNGLSIQVSVLG
Trigger: TCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCCAGAAGACCGAGTTCTCCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR CCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTaGTCCAATTCTTCTGTGCACACTGGGGCTGGTGACAGAGGAGCC +
Preference number: 1 (lower is better)
Translates to: VYLSLLFYKFLRTVT*SNSSVHTGAGDRGA
Trigger: GGCTCCTCTGTCACCAGCCCCAGTGTGCACAGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 90 bp CCATACTTAACTCCTTATCCTAAACCTCTGTGGCCAGATATGTCTTaGAATTTAGAATCTTTAGGAGGTAAAAGGCCATGTAGGGCACAC +
Preference number: 1 (lower is better)
Translates to: PYLTPYPKPLWPDMS*NLESLGGKRPCRAH
Trigger: GTGTGCCCTACATGGCCTTTTACCTCCTAAAGATTCTAAATTCCAAGACATATCTGGCCACAGAGGTTTAGGATAAGGAGTTAAGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459723.1
3UTR-3UTR CCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCGCAGGCTGTTCCTCCTaGTCACGCCTTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLAAGCSS*SRLGVG
Trigger: CCCCACCCCAAGGCGTGACCAGGAGGAACAGCCTGC...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCGCGGGGGCATGCCGGTaGGGCTGCGGAGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPAGACR*GCGGCG
Trigger: CCCACAGCCTCCGCAGCCTCACCGGCATGCCCCCGC...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR GCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGGTGCCGGTGGGTCCTaGCACCCGGGGCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGGAGGS*HPGLRD
Trigger: GTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACC...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCTGGACTTGGGGAGGGTaGATCACGGCCTGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLAWTWGG*ITAWAV
Trigger: CACAGCCCAGGCCGTGATCCACCCTCCCCAAGTCCA...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAGGGAGGCCCCGGCACTaGCTCAGTCCTCAGCGGTGC +
Preference number: 2 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAGRPRH*LSPQRC
Trigger: GCACCGCTGAGGACTGAGTCAGTGCCGGGGCCTCCC...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CCA 90 bp GTGTCAGCCGTGTCCTCGCAGAGCAGGGAAATGGTGGGCTGCCGGGCAGGGACGCCACGGCTGCGCTCCTaGCCACGTTCTTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: VSAVSSQSREMVGCRAGTPRLRS*PRSCWA
Trigger: AGCCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGG...CGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCTGCGAGGACACGGCTGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTAGAAAGAGGTGCCGGTaGGTCCTGCCACCCGGGGCT +
Preference number: 2 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCRKRCR*VLPPGA
Trigger: AGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCT...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGGGCCGCTGGCCCTGGTaGACTTGGGGAGGGTGGATC +
Preference number: 2 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEGRWPW*TWGGWI
Trigger: GATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCC...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAGAGGTGAGGGGCCGCTaGCCCTGGTGGACTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAEVRGR*PWWTWG
Trigger: TCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTC...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGGCAGGGATAGGTGGTTaGGATGGCTGCTGGGGGCCG +
Preference number: 2 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEAGIGG*DGCWGP
Trigger: CGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGC...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCCTTGCCGGGACAGCTaGCTGGGCCGAGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEPCRDS*LGRGDR
Trigger: TCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGG...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGCCCAGGCAGCTCCCTaGGTGGCCGGTGCAGTCATC +
Preference number: 2 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLAQAAP*VAGAVI
Trigger: GATGACTGCACCGGCCACTCAGGGAGCTGCCTGGGC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGGGGTGGATCACGGCCTaGGCTGTGAGTGCTGTGTCT +
Preference number: 2 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAGWITA*AVSAVS
Trigger: AGACACAGCACTCACAGCCCAGGCCGTGATCCACCC...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGTGCAGATGGCCACGGTaGTCGTGGTTTGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLCRWPR*SWFVLP
Trigger: AGGAAGGACAAACCACGACCACCGTGGCCATCTGCA...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAGGTCACGCCTTGGGGTaGGGCAGCCACTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAGHALG*GSHLPS
Trigger: AGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACC...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGACTGCCGCTGAGACCTaGGTGAGGTGGGGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRTAAET*VRWGPL
Trigger: CAAAGGACCCCACCTCACCCAGGTCTCAGCGGCAGT...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp GGCGCCACTCCCCCTCCTTGGCAGGACTGTGTTTCCTTCATGAGGTaGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: GATPPPWQDCVSFMR*KTALGRPCRDSWLG
Trigger: GCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp AAAGCCAAGGTTTGGGAGTTCCTGCGGCCAGCCCTGCTCCCTGACTaGGCAAACCCAGCCGGAGGTGCACAGGGGAAGGGTGGACCAGGG +
Preference number: 2 (lower is better)
Translates to: KAKVWEFLRPALLPD*ANPAGGAQGKGGPG
Trigger: CCCTGGTCCACCCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCATGGGGGCATCTGAATTaGCTGTGCGTGAGGTGCCGT +
Preference number: 2 (lower is better)
Translates to: GRCSHLHSPRCLRWSQPAWGHLN*LCVRCR
Trigger: ACGGCACCTCACGCACAGTCAATTCAGATGCCCCCA...TGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR TCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGACAGTCGAGGGCAGGTaGCGTAGAGGGTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRTVEGR*RRGCLP
Trigger: AGGAAGACACCCTCTACGTCACCTGCCCTCGACTGT...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTGGCTGTCTCCACGGCTaGGCTCCTGGCCACGTTCTT +
Preference number: 2 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLGCLHG*APGHVL
Trigger: AAGAACGTGGCCAGGAGCGCAGCCGTGGAGACAGCC...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR GCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAGCCGGTGCAGTCATCTaGATTCGCCGCGGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAAGAVI*IRRGVS
Trigger: GGAGACACCGCGGCGAATGCAGATGACTGCACCGGC...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCGCCCTCGGCAGGCCTTaGCGGGACAGCTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSALGRP*RDSWLG
Trigger: GCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGC...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGAAGCAACACACAGGCTaGCTGCTGGGTGTGGCGTGT +
Preference number: 2 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRKQHTG*LLGVAC
Trigger: ACACGCCACACCCAGCAGGCAGCCTGTGTGTTGCTT...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAGGCTGGGGGACAGGCTaGCTGTCTCCACGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPGWGTG*LSPRLR
Trigger: GCGCAGCCGTGGAGACAGCCAGCCTGTCCCCCAGCC...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAGCCAGTCAGCGGCACTaGGGTCCCTACCAGCGGGGC +
Preference number: 2 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPASQRH*GPYQRG
Trigger: GCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGC...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGGAGGGGAACTGGCTCTaGGCCATCTCTCGGCACATG +
Preference number: 2 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEEGNWL*AISRHM
Trigger: CATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTC...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAGCAGGCTGTTCCTCCTaGTCACGCCTTGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEAGCSS*SRLGVG
Trigger: CCCCACCCCAAGGCGTGACCAGGAGGAACAGCCTGC...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAACAGTCGAGGGCAGGTaGCGTAGAGGGTGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGTVEGR*RRGCLP
Trigger: AGGAAGACACCCTCTACGTCACCTGCCCTCGACTGT...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGCTCAGTCCTCAGCGGTaGCCACAGGCTCAGCACATG +
Preference number: 2 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSALSPQR*PQAQHM
Trigger: CATGTGCTGAGCCTGTGGGCACCGCTGAGGACTGAG...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAGGTCACGCCTTGGGGTaGGGCAGCCACTTGCCTTCT +
Preference number: 2 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEGHALG*GSHLPS
Trigger: AGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACC...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp CAACGTGGGGCTTCTTCCCATTCAAGGGAGCGCAGGGATAGGTGGTaGAGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QRGASSHSRERRDRW*RWLLGAAQNGGCSQ
Trigger: CTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTCCCTTGAATGGGAAGAAGCCCCACGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCCAGCCAGGGCCAGCTTaGTCCTCTCTACCCCTCTTG +
Preference number: 2 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPQPGPA*SSLPLL
Trigger: CAAGAGGGGTAGAGAGGATCAAGCTGGCCCTGGCTG...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTGGTCCAATTCTTCTGTaGACACTGGGGCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCGPILL*TLGLVT
Trigger: TGTCACCAGCCCCAGTGTGCACAGAAGAATTGGACC...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTGGCCGCACAGAATGGTaGGTGCTCCCAGTGTGTCTT +
Preference number: 2 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLGRTEW*VLPVCL
Trigger: AAGACACACTGGGAGCACCCACCATTCTGTGCGGCC...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGATAGGTGGTTGAGATaGCTGCTGGGGGCCGCACAG +
Preference number: 2 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLDRWLR*LLGAAQ
Trigger: CTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGACAGACTCAGAGCTCTaGGGACACCATGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWETDSEL*GHHALA
Trigger: TGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGT...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGAGGGGCCGCTGGCCCTaGTGGACTTGGGGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: AKLLGALVIGNPHPTHLERGRWP*WTWGGW
Trigger: CCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCT...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAGGTGGCCCACCCGTGTaGCATGGAGTGAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPGGPPV*HGVSCR
Trigger: CCTGCAGCTCACTCCATGCCACACGGGTGGGCCACC...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp CTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGTaGTGGAAGGTCTCACCAGTGACCAGAGAGGTGAGGGGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: LMPLVGTSAGRSGGK*WKVSPVTREVRGRW
Trigger: CCAGCGGCCCCTCACCTCTCTGGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp TCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGCCCCTTAGGTaGCTTGTGAACGCAAGTGTCTGGGTTGTGGGAGGCTGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: SSASGRAALLHLPLR*LVNASVWVVGGCQG
Trigger: GCCTTGGCAGCCTCCCACAACCCAGACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAACTGGTCAGGAAGGTaGGGCTTAGGCAGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVNWSGR*GLGSSG
Trigger: TCCAGAACTGCCTAAGCCTCACCTTCCTGACCAGTT...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR GCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGACTCTTCCAGGGATTCTaGAGATGGCCACGGTGGTCG +
Preference number: 2 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERLFQGF*RWPRWS
Trigger: CGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAG...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCAGAAAGAGGTGCCGGTaGGTCCTGCCACCCGGGGCT +
Preference number: 2 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSRKRCR*VLPPGA
Trigger: AGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCT...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAACAGACTCAGAGCTCTaGGGACACCATGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVATDSEL*GHHALA
Trigger: TGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGT...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAACACAGGCTGCCTGCTaGGTGTGGCGTGTCCCGTCT +
Preference number: 2 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPTQAAC*VWRVPS
Trigger: AGACGGGACACGCCACACCCAGCAGGCAGCCTGTGT...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACCCTGCAAGCCCACATaGGGACTGCCCTTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEPCKPT*GLPFSW
Trigger: CCAAGAAAAGGGCAGTCCCCATGTGGGCTTGCAGGG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp GGGGACAGGCTGGCTGTCTCCACGGCTGCGCTCCTGGCCACGTTCTaGCTGGGCTTAGAGTCTGCTTCCGTTTCGTTGACGATTACCAAC +
Preference number: 2 (lower is better)
Translates to: GDRLAVSTAALLATF*LGLESASVSLTITN
Trigger: GTTGGTAATCGTCAACGAAACGGAAGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGGAGACAGCCAGCCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR TCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATGCAGGGATAGGTGGTTaGGATGGCTGCTGGGGGCCG +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNAGIGG*DGCWGP
Trigger: CGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGC...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGGAGAAATCTTTCCATaGTGGGAGGCCTCTCGGCTG +
Preference number: 2 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLGEIFP*WEASRL
Trigger: CAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCATTGTACCTGCAGCCATaGAGGCTGGGTGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPLYLQP*RLGGHS
Trigger: GCTGTGCCCACCCAGCCTTCATGGCTGCAGGTACAA...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGTGGGTCTGTGGGGGCTaGCCTCAGACCTCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: SETLEESSASGRAALLHLWVCGG*PQTSEA
Trigger: AGCCTCAGAGGTCTGAGGTCAGCCCCCACAGACCCA...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAGCTGGGCTTAGAGTCTaGTTCCGTTTCGTTGACGAT +
Preference number: 2 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAAGLRV*FRFVDD
Trigger: ATCGTCAACGAAACGGAAGCAGACTCTAAGCCCAGC...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR GCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCGCTCCCAGTGTGTCTTaGCAGTCAGCGGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: PSLPGILQMATVVVVCPSAPSVS*QSAALG
Trigger: CCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGC...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCCGCGGTGTCTCCGCTaGTCCCAGCCTGCACGTGAA +
Preference number: 2 (lower is better)
Translates to: GLAPRPPYISKASGSPGYPRCLR*SQPARE
Trigger: TTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCTGGCCACGGTGGTCGTaGTTTGTCCTTCCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPWPRWS*FVLPLG
Trigger: ACCCAAAGGAAGGACAAACCACGACCACCGTGGCCA...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTaGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCT +
Preference number: 2 (lower is better)
Translates to: GLCFLHEVENCPRQA*PGQLAGPRRQRPCS
Trigger: AGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGGAGAAATCTTTCCATaGTGGGAGGCCTCTCGGCTG +
Preference number: 2 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKGEIFP*WEASRL
Trigger: CAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCC...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGGCGTGTCCCGTCTCCTaGTGCTGTGGTCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: SETLEESSASGRAALLHLACPVS*CCGPSL
Trigger: GAGAGAAGGACCACAGCATCAGGAGACGGGACACGC...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGCTCCCAGTGTGTCTTaGCAGTCAGCGGCACTGGGG +
Preference number: 2 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEAPSVS*QSAALG
Trigger: CCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAAGAGGAAGAAAGAGGTaGCGGTGGGTCCTGCCACCC +
Preference number: 2 (lower is better)
Translates to: GLCFLHEVENCPRQALPGRGRKR*RWVLPP
Trigger: GGGTGGCAGGACCCACCGGCACCTCTTTCTTCCTCT...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACCCCTTTCTGAGCTGTaGGTTTTCTCTATGGAAGCA +
Preference number: 2 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAPLSEL*VFSMEA
Trigger: TGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGG...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGAGTGCGTGAGGTGCCGTaGCAGCTGCCGTTCGGAGCA +
Preference number: 2 (lower is better)
Translates to: IQISSSSRGRVTDSELWGVREVP*QLPFGA
Trigger: TGCTCCGAACGGCAGCTGCCACGGCACCTCACGCAC...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCCATGCCCTTGCAGCTaGAGGGGAACTGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNPCPCS*RGTGSG
Trigger: CCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCCCGAGACTACCCTATaGCCAGGCTCCGGCGGATAC +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNPETTL*PGSGGY
Trigger: GTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGACACAGGCTGCCTGCTaGGTGTGGCGTGTCCCGTCT +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRTQAAC*VWRVPS
Trigger: AGACGGGACACGCCACACCCAGCAGGCAGCCTGTGT...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACTGCTTCCGTTTCGTTaGCGATTACCAACTGGTCAG +
Preference number: 2 (lower is better)
Translates to: RLSWPHLTCWDRYLARPELLPFR*RLPTGQ
Trigger: CTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR TCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATTTGTACCTGCAGCCATaGAGGCTGGGTGGGCACAGC +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNLYLQP*RLGGHS
Trigger: GCTGTGCCCACCCAGCCTTCATGGCTGCAGGTACAA...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGCATGTTCTTCTAAAATaGAGGTGGCAAAAGATCTCA +
Preference number: 2 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLHVLLK*RWQKIS
Trigger: TGAGATCTTTTGCCACCTGCATTTTAGAAGAACATG...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGAAGCAACACACAGGCTaGCTGCTGGGTGTGGCGTGT +
Preference number: 2 (lower is better)
Translates to: SETLEESSASGRAALLHLKQHTG*LLGVAC
Trigger: ACACGCCACACCCAGCAGGCAGCCTGTGTGTTGCTT...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGGAGCGCAGGGATAGGTaGTTGAGATGGCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRERRDR*LRWLLG
Trigger: CCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTC...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAATCTGGAGGAAAGTTGTaGAAGGTCTCACCAGTGACC +
Preference number: 2 (lower is better)
Translates to: RLSWPHLTCWDRYLARPESGGKL*KVSPVT
Trigger: GGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGA...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp AGTGCTGTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTaGGGGGCTGTGTCTGATGCATCTGGGTCCTTGCTTGTACACACC +
Preference number: 2 (lower is better)
Translates to: SAVSGSRAGRVERNI*GAVSDASGSLLVHT
Trigger: GGTGTGTACAAGCAAGGACCCAGATGCATCAGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACACAGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp CAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCTTaGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTC +
Preference number: 2 (lower is better)
Translates to: QGFCRWPRWSWFVLP*GFCPCGPLSELCVF
Trigger: GAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 90 bp TCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTaGTCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGC +
Preference number: 2 (lower is better)
Translates to: SFSSRDSADGHGGRG*SFLWVSAHVAPFLS
Trigger: GCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCACAGGCTCAGCACATaGAGCCTCTTCGCCCACGGG +
Preference number: 2 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLHRLST*SLFAHG
Trigger: CCCGTGGGCGAAGAGGCTGCATGTGCTGAGCCTGTG...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR GCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCGCACAGAATGGTGGGTaGTCCCAGTGTGTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: PSLPGILQMATVVVVCPSAQNGG*SQCVLP
Trigger: TGGCAAGACACACTGGGAGCACCCACCATTCTGTGC...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGCCGGTGCAGTCATCTaGATTCGCCGCGGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCAGAVI*IRRGVS
Trigger: GGAGACACCGCGGCGAATGCAGATGACTGCACCGGC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCCTGGTGGGCACATCTaGTGGCAGGTCTGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: GLAPRPPYISKASGSPGYPGGHI*WQVWRK
Trigger: TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGTGGCCCCATCTGACCTaGTGGGACAGGTACCTTGCA +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRWPHLT*WDRYLA
Trigger: TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCA...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGGGGGCCGCACAGAATaGTGGGTGCTCCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCGGRTE*WVLPVC
Trigger: ACACACTGGGAGCACCCACCATTCTGTGCGGCCCCC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCACACCCAGTCCGAATaGGGAAGGGAACCATGGGGT +
Preference number: 2 (lower is better)
Translates to: GLAPRPPYISKASGSPGYHTQSE*GREPWG
Trigger: ACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTCCTTGCCGGGACAGCTaGCTGGGCCGAGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKAPCRDS*LGRGDR
Trigger: TCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGG...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGGCCACTCCCCCTCCTTaGCAGGACTGTGTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRATPPP*QDCVSF
Trigger: GAAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGC...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGTGGCCACGGTGGTCGTaGTTTGTCCTTCCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: SETLEESSASGRAALLHLWPRWS*FVLPLG
Trigger: ACCCAAAGGAAGGACAAACCACGACCACCGTGGCCA...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGCTGCCTGCTGGGTGTaGCGTGTCCCGTCTCCTGAT +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCAACWV*RVPSPD
Trigger: ATCAGGAGACGGGACACGCCACACCCAGCAGGCAGC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCCCTGCAAGCCCACATaGGGACTGCCCTTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNPCKPT*GLPFSW
Trigger: CCAAGAAAAGGGCAGTCCCCATGTGGGCTTGCAGGG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTAGGGCTTCTAAGGACTaGGGCCTGTCCCCATGGGCG +
Preference number: 2 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKARASKD*GLSPWA
Trigger: CGCCCATGGGGACAGGCCTCAGTCCTTAGAAGCCCT...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAATGTGGCCCCCTTTCTaGGCTGTGCGTTTTCTCTAT +
Preference number: 2 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPMWPPF*AVRFLY
Trigger: ATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACAT...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp AAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATTCAGCAGGGAAATGGTGGGCTaGCGGGCAGGGACGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KSFHDGRPLGCYSRKPFSREMVG*RAGTRL
Trigger: CAGCCTCGTCCCTGCCCGGCAGCCCACCATTTCCCT...GCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR GCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGACACCATGCCCTTaGAGCTGGAGGGGAACTGGC +
Preference number: 2 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKAGTPCP*SWRGTG
Trigger: GCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCC...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCCCCCCAGACGCAAGTTaGCAGCCCCAGCTGAAAGAG +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCPPDAS*QPQLKE
Trigger: CTCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGG...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGCTGGGACAGGTACCTTaGACGTCCAGAAAGGGACGA +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRLGQVP*TSRKGR
Trigger: TCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTAGAGCAGGGAAATGGTaGGCTGCCGGGCAGGGACGA +
Preference number: 2 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKARAGKW*AAGQGR
Trigger: TCGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCT...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGGGGGCCGCACAGAATaGTGGGTGCTCCCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVGGRTE*WVLPVC
Trigger: ACACACTGGGAGCACCCACCATTCTGTGCGGCCCCC...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAAATTCAAGGACAACGTaGGGCTTCTTCCCATTCAAG +
Preference number: 2 (lower is better)
Translates to: RLSWPHLTCWDRYLARPENSRTT*GFFPFK
Trigger: CTTGAATGGGAAGAAGCCCCACGTTGTCCTTGAATT...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAACTACGTACAGTGACCTaGTCCAATTCTTCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKLRTVT*SNSSVH
Trigger: GTGCACAGAAGAATTGGACCAGGTCACTGTACGTAG...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATAGGAAGCGTCCTGAGTaGGGAGCTGGCTACATTCCT +
Preference number: 2 (lower is better)
Translates to: GLAPRPPYISKASGSPGYRKRPE*GAGYIP
Trigger: AGGAATGTAGCCAGCTCCCCACTCAGGACGCTTCCT...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCCTTTAATCCTCTGCTaGTCCTCCCGGGCATGCTGT +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNPLILC*SSRACC
Trigger: ACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGCTTGGGGGCTGTGTCTaGTGCATCTGGGTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWLGGCV*CIWVLA
Trigger: AGCAAGGACCCAGATGCATCAGACACAGCCCCCAAG...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGCATGAGGTTGAAAACTaGCCTCGGCAGGCCTTGCCG +
Preference number: 2 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWHEVEN*PRQALP
Trigger: CGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGGGCCATAACTCTAAGTaGTCTCTGCAGGGACTTGGG +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRGHNSK*SLQGLG
Trigger: CCCAAGTCCCTGCAGAGAGCACTTAGAGTTATGGCC...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGGGTTTGTCCTTCCTTTaGGTTTCTGCCCATGTGGCC +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRGLSFL*VSAHVA
Trigger: GGCCACATGGGCAGAAACCCAAAGGAAGGACAAACC...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTGCACAGAATGGTGGGTaGTCCCAGTGTGTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: LSAAIAENHSALSALCVPAQNGG*SQCVLP
Trigger: TGGCAAGACACACTGGGAGCACCCACCATTCTGTGC...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGCCCCTTTCTGAGCTGTaGGTTTTCTCTATGGAAGCA +
Preference number: 2 (lower is better)
Translates to: SETLEESSASGRAALLHLPLSEL*VFSMEA
Trigger: TGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGG...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTAATTCAAGGACAACGTaGGGCTTCTTCCCATTCAAG +
Preference number: 2 (lower is better)
Translates to: VSGSRAGRVERNILGAVSNSRTT*GFFPFK
Trigger: CTTGAATGGGAAGAAGCCCCACGTTGTCCTTGAATT...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCCAGGGATTCTGCAGATaGCCACGGTGGTCGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCQGFCR*PRWSWF
Trigger: AAACCACGACCACCGTGGCCATCTGCAGAATCCCTG...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAGGTGCCGGTGGGTCCTaGCACCCGGGGCTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSGAGGS*HPGLRD
Trigger: GTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACC...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGCCTTCTCTAGTTTCTaGTGCCCCACAGACAGAGTC +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCAFSSF*CPTDRV
Trigger: GACTCTGTCTGTGGGGCAGCAGAAACTAGAGAAGGC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCTACGTACAGTGACCTaGTCCAATTCTTCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNLRTVT*SNSSVH
Trigger: GTGCACAGAAGAATTGGACCAGGTCACTGTACGTAG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGCTTCACGGTCCCAACTaGTTCCTTCTTAGAGATGGT +
Preference number: 2 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRLHGPN*FLLRDG
Trigger: ACCATCTCTAAGAAGGAACCAGTTGGGACCGTGAAG...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATTGGGGAAGGGAACCATaGGGTTTCCATATTCAGATC +
Preference number: 2 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNWGREP*GFHIQI
Trigger: GATCTGAATATGGAAACCCCATGGTTCCCTTCCCCA...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCTTTGGTGAAGAGAAATaGGGAAGCGTCCTGAGTGGG +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCFGEEK*GSVLSG
Trigger: CCCACTCAGGACGCTTCCTCATTTCTCTTCACCAAA...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGGGAGGCCTCTCGGCTaGTATAGCAGAAAACCATTC +
Preference number: 2 (lower is better)
Translates to: EWGREPWGFHIQISSSSRGRPLG*YSRKPF
Trigger: GAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCC...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCATCTGCTGGCAGGTCTaGAGGAAAGTTGTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCICWQV*RKVVEG
Trigger: ACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGAT...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTGTGCGTTTTCTCTATaGAAGCAAAGGTCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSCAFSL*KQRSLY
Trigger: GTACAAGGACCTTTGCTTCCATAGAGAAAACGCACA...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATGCCCAGGCAGCTCCCTaGGTGGCCGGTGCAGTCATC +
Preference number: 2 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNAQAAP*VAGAVI
Trigger: GATGACTGCACCGGCCACTCAGGGAGCTGCCTGGGC...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCTTTCAAAACCAGAAGTaGATGTCTCAGGGGCTAGCC +
Preference number: 2 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCFQNQK*MSQGLA
Trigger: GGCTAGCCCCTGAGACATGCACTTCTGGTTTTGAAA...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR GCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAGGCTCTTCCTCTGGATaGCAGGGGCCCAGCGTGTCC +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSGSSSG*QGPSVS
Trigger: GGACACGCTGGGCCCCTGGCATCCAGAGGAAGAGCC...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGCTTCTAAAATGCAGGTaGCAAAAGATCTCAGCGCGG +
Preference number: 2 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWLLKCR*QKISAR
Trigger: CCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAG...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR TCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAAATCCCACGCGATGGTaGAGGCTGGCCCTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSNPTRW*RLALPA
Trigger: GGCAGGAAGGGCCAGCCTTCACCATCGCGTGGGATT...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCACCATGCCCTTGCAGCTaGAGGGGAACTGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSPCPCS*RGTGSG
Trigger: CCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGG...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCACTTCTGACAGCAGGCTaGTGGCCCACCCGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSLLTAG*WPTRVA
Trigger: TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAG...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTGGACAGCTGACCTGTaGGCAGCACGGCCTTCTTTT +
Preference number: 2 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSWTADL*AARPSF
Trigger: AAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCA...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR CCA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTAGGCAGCTCCCTGAGTaGCCGGTGCAGTCATCTGCA +
Preference number: 2 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSRQLPE*PVQSSA
Trigger: TGCAGATGACTGCACCGGCCACTCAGGGAGCTGCCT...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATTACCCAACAAATCTCTaGAAAACCAAACCAAACACT +
Preference number: 2 (lower is better)
Translates to: RSRVRDELWQKWEETPSYYPTNL*KTKPNT
Trigger: AGTGTTTGGTTTGGTTTTCCAGAGATTTGTTGGGTA...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR TCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCATTTGACGGGAGCTCCTaGAGACATAGCTGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSFDGSS*RHSCAH
Trigger: GTGGGCACAGCTATGTCTTCAGGAGCTCCCGTCAAA...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCATGCAGATGGCCACGGTaGTCGTGGTTTGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSCRWPR*SWFVLP
Trigger: AGGAAGGACAAACCACGACCACCGTGGCCATCTGCA...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTGAGCTGTGGCAAAAGTaGGAGGAGACGCCCTCATAT +
Preference number: 2 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFELWQK*EETPSY
Trigger: ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTC...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR GCA 90 bp AAACGAAAACATAAACTCACAATTACTGGCATCAATGACTCTAATAAACCCGCCTTTGGGTTTCAGAATTaGAGAGAAGGGGTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: KRKHKLTITGINDSNKPAFGFQN*REGVVA
Trigger: AGCCACCACCCCTTCTCTGCAATTCTGAAACCCAAA...GGCGGGTTTATTAGAGTCATTGATGCCAGTAATTGTGAGTTTATGTTTTCGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459723.1
3UTR-3UTR CCA 90 bp CAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGAAAAATTTTCAGAGCTGTTTaGGTTTCAGAATTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: QLGREQLKPNTEFLQKRKIFRAV*VSELQR
Trigger: TCTCTGCAATTCTGAAACCCAAACAGCTCTGAAAAT...TTTTCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000459723.1
3UTR-3UTR CCA 90 bp AAACGAAAACATAAACTCACAATTACTGGCATCAATGACTCTAATAAACCCGCCCCTGAAGGCAGGTTTTaGTTTTGCCATCATACGAGT +
Preference number: 2 (lower is better)
Translates to: KRKHKLTITGINDSNKPAPEGRF*FCHHTS
Trigger: ACTCGTATGATGGCAAAACCAAAACCTGCCTTCAGG...GGCGGGTTTATTAGAGTCATTGATGCCAGTAATTGTGAGTTTATGTTTTCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000459723.1
3UTR-3UTR TCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTATTCTTAGTCAATTCTaGGAAGTTCTTCCACATACC +
Preference number: 2 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFILSQF*EVLPHT
Trigger: GGTATGTGGAAGAACTTCTCAGAATTGACTAAGAAT...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR CAA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCTGCCCTCGGCAGGCCTaGCCGGGACAGCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLACPRQA*PGQLAG
Trigger: CCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCA...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp GCTCAGCACATGCAGCCTCTTCGCCCACGGGCTCTGTaGAGGCGGCAGCCGGCGTGGACAGCGGGGGCATGC +
Preference number: 3 (lower is better)
Translates to: AQHMQPLRPRAL*RRQPAWTAGAC
Trigger: GCATGCCCCCGCTGTCCACGCCGGCTGCCGCCTGCACAGAGCCCGTGGGCGAAGAGGCTGCATGTGCTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CAA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGTGCCCTCGGCAGGCCTaGCCGGGACAGCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: LWMPGAQRVLSGLACLGACPRQA*PGQLAG
Trigger: CCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCA...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp AGGCCCCTCCTCCCAATCCCACGCGATGGTGAAGGCTaGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: RPLLPIPRDGEG*PFLPGGAPQLA
Trigger: GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGGGATTGGGAGGAGGGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp CCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTaGGTGGCCGGTGCAGTCATCTGCATTCGCCGCGGT +
Preference number: 3 (lower is better)
Translates to: PGAQRHGAQAAP*VAGAVICIRRG
Trigger: ACCGCGGCGAATGCAGATGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp CAGCGGGGCCACACACACAAAGGGAGGCCCCGGCACTaGCTCAGTCCTCAGCGGTGCCCACAGGCTCAGCAC +
Preference number: 3 (lower is better)
Translates to: QRGHTHKGRPRH*LSPQRCPQAQH
Trigger: GTGCTGAGCCTGTGGGCACCGCTGAGGACTGAGTCAGTGCCGGGGCCTCCCTTTGTGTGTGTGGCCCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR GCA 72 bp GACTCAGTCCTCAGCGGTGCCCACAGGCTCAGCACATaGAGCCTCTTCGCCCACGGGCTCTGTGCAGGCGGC +
Preference number: 3 (lower is better)
Translates to: DSVLSGAHRLST*SLFAHGLCAGG
Trigger: GCCGCCTGCACAGAGCCCGTGGGCGAAGAGGCTGCATGTGCTGAGCCTGTGGGCACCGCTGAGGACTGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR GCA 72 bp GGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTaGCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: GPHRMVGAPSVS*QSAALGSLPAG
Trigger: CCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TGGCCCTGGTGGACTTGGGGAGGGTGGATCACGGCCTaGGCTGTGAGTGCTGTGTCTGGCTCCCGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: WPWWTWGGWITA*AVSAVSGSRAG
Trigger: GCCAGCTCGGGAGCCAGACACAGCACTCACAGCCCAGGCCGTGATCCACCCTCCCCAAGTCCACCAGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TCACCAGTGACCAGAGAGGTGAGGGGCCGCTGGCCCTaGTGGACTTGGGGAGGGTGGATCACGGCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: SPVTREVRGRWP*WTWGGWITAWA
Trigger: AGCCCAGGCCGTGATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTCTCTGGTCACTGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCAGCCAGGGCCAGCTaGATCCTCTCTACCCCTCTT +
Preference number: 3 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAPARAS*ILSTPL
Trigger: AAGAGGGGTAGAGAGGATCAAGCTGGCCCTGGCTGG...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp TGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTaGTGGGACAGGTACCTTGCACGTCCAGAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: CLGERLSWPHLT*WDRYLARPERD
Trigger: GTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTaGGGTCCCTACCAGCGGGGCCACACACACAAAGGG +
Preference number: 3 (lower is better)
Translates to: WVLPVCLASQRH*GPYQRGHTHKG
Trigger: CCCTTTGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TTTGGGAGTTCCTGCGGCCAGCCCTGCTCCCTGACTTaGCAAACCCAGCCGGAGGTGCACAGGGGAAGGGTG +
Preference number: 3 (lower is better)
Translates to: FGSSCGQPCSLT*QTQPEVHRGRV
Trigger: CACCCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTaGGACAGGTACCTTGCACGTCCAGAAAGGGACGAG +
Preference number: 3 (lower is better)
Translates to: LGERLSWPHLTC*DRYLARPERDE
Trigger: CTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp GGCCGGATGGGTCTGTGGGGGCTGACCTCAGACCTCTaGGGCTATGACCTGAGTGTCAGAAGCCACAGCCCC +
Preference number: 3 (lower is better)
Translates to: GRMGLWGLTSDL*GYDLSVRSHSP
Trigger: GGGGCTGTGGCTTCTGACACTCAGGTCATAGCCTCAGAGGTCTGAGGTCAGCCCCCACAGACCCATCCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp CAAGGTTTGGGAGTTCCTGCGGCCAGCCCTGCTCCCTaGCTTGGCAAACCCAGCCGGAGGTGCACAGGGGAA +
Preference number: 3 (lower is better)
Translates to: QGLGVPAASPAP*LGKPSRRCTGE
Trigger: TTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp CATATGACAGAGGAAGAAAGAGGTGCCGGTGGGTCCTaGCACCCGGGGCTCAGAGACACGGAGCCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: HMTEEERGAGGS*HPGLRDTEPRQ
Trigger: CTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCTTCCTCTGTCATATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GTGGTTGAGATGGCTGCTGGGGGCCGCACAGAATGGTaGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCAC +
Preference number: 3 (lower is better)
Translates to: VVEMAAGGRTEW*VLPVCLASQRH
Trigger: GTGCCGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTaGCCCACCCGTGTGGCATGGAGTGAGCTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: PVGAQRLLTAGW*PTRVAWSELQA
Trigger: AGCCTGCAGCTCACTCCATGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACGCCACTCCCCCTCCTaGGCAGGACTGTGTTTCCTT +
Preference number: 3 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVARHSPS*AGLCFL
Trigger: AAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGCG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAATGGGGGCATCTGAATaGACTGTGCGTGAGGTGCCG +
Preference number: 3 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAMGASE*TVREVP
Trigger: CGGCACCTCACGCACAGTCAATTCAGATGCCCCCAT...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CAA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGAGGTCTGGAGGAAAGTaGTGGAAGGTCTCACCAGTG +
Preference number: 3 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRRSGGK*WKVSPV
Trigger: CACTGGTGAGACCTTCCACAACTTTCCTCCAGACCT...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCCGCCACTCCCCCTCCTaGGCAGGACTGTGTTTCCTT +
Preference number: 3 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLRHSPS*AGLCFL
Trigger: AAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGCG...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp TCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTaGCGGGACAGCTGGCTGGGCCGAGGAGACAGAGAC +
Preference number: 3 (lower is better)
Translates to: SFMRLKTALGRP*RDSWLGRGDRD
Trigger: GTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp ATCCTCCGCTGGTCCTCCCAGTCACCTTTAATCCTCTaGTGGTCCTCCCGGGCATGCTGTCCAGCCCTGACC +
Preference number: 3 (lower is better)
Translates to: ILRWSSQSPLIL*WSSRACCPALT
Trigger: GGTCAGGGCTGGACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGACTGGGAGGACCAGCGGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp TCAAAGCCAAGGTTTGGGAGTTCCTGCGGCCAGCCCTaGTCCCTGACTTGGCAAACCCAGCCGGAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: SKPRFGSSCGQP*SLTWQTQPEVH
Trigger: GTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TCCCATTCAAGGGAGCGCAGGGATAGGTGGTTGAGATaGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: SHSRERRDRWLR*LLGAAQNGGCS
Trigger: GGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTCCCTTGAATGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp AGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTaGAGGGGAACTGGCTCTGGGCCATCTCTCGGCACA +
Preference number: 3 (lower is better)
Translates to: RLRALGTPCPCS*RGTGSGPSLGT
Trigger: TGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GCAAAAGATCTCAGCGCGGCTCCCGAGACTACCCTATaGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTG +
Preference number: 3 (lower is better)
Translates to: AKDLSAAPETTL*PGSGGYLMPLV
Trigger: CACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGAGCCGCGCTGAGATCTTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GAGCTGCAGGCTGTTCCTCCTGGTCACGCCTTGGGGTaGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: ELQAVPPGHALG*GSHLPSLVSAA
Trigger: GGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCAGGAGGAACAGCCTGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp AGACCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTaGTGGCCCACCCGTGTGGCATGGAGTGAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: RPVGAQRLLTAG*WPTRVAWSELQ
Trigger: CTGCAGCTCACTCCATGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CTCCGCTGGTCCTCCCAGTCACCTTTAATCCTCTGCTaGTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAG +
Preference number: 3 (lower is better)
Translates to: LRWSSQSPLILC*SSRACCPALTK
Trigger: CTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGACTGGGAGGACCAGCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CTTGGCAAACCCAGCCGGAGGTGCACAGGGGAAGGGTaGACCAGGGCCTGGGCCATAACTCTAAGTGCTCTC +
Preference number: 3 (lower is better)
Translates to: LGKPSRRCTGEG*TRAWAITLSAL
Trigger: GAGAGCACTTAGAGTTATGGCCCAGGCCCTGGTCCACCCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CACCTGCCCCTTAGGTTGCTTGTGAACGCAAGTGTCTaGGTTGTGGGAGGCTGCCAAGGCTCCGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: HLPLRLLVNASV*VVGGCQGSGRG
Trigger: CCCTCTCCCGGAGCCTTGGCAGCCTCCCACAACCCAGACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp ACAGGCTGCCTGCTGGGTGTGGCGTGTCCCGTCTCCTaGTGCTGTGGTCCTTCTCTCCATGATGGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: TGCLLGVACPVS*CCGPSLHDGLP
Trigger: GGGAAGACCATCATGGAGAGAAGGACCACAGCATCAGGAGACGGGACACGCCACACCCAGCAGGCAGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp GTGACAGAGGAGCCATATGACAGAGGAAGAAAGAGGTaGCGGTGGGTCCTGCCACCCGGGGCTCAGAGACAC +
Preference number: 3 (lower is better)
Translates to: VTEEPYDRGRKR*RWVLPPGAQRH
Trigger: GTGTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCTTCCTCTGTCATATGGCTCCTCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp CAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTaGACGTCCAGAAAGGGACGAGCACACCTCCACAAC +
Preference number: 3 (lower is better)
Translates to: QLAPSDLLGQVP*TSRKGRAHLHN
Trigger: GTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GGGGCTTCTTCCCATTCAAGGGAGCGCAGGGATAGGTaGTTGAGATGGCTGCTGGGGGCCGCACAGAATGGT +
Preference number: 3 (lower is better)
Translates to: GASSHSRERRDR*LRWLLGAAQNG
Trigger: ACCATTCTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTCCCTTGAATGGGAAGAAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GAGACCTGGGTGAGGTGGGGTCCTTTGAAGCCAAAATaGCTGGTGGCCTCCAATGGGCTGGCTCCCAGACCT +
Preference number: 3 (lower is better)
Translates to: ETWVRWGPLKPK*LVASNGLAPRP
Trigger: AGGTCTGGGAGCCAGCCCATTGGAGGCCACCAGCCATTTTGGCTTCAAAGGACCCCACCTCACCCAGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp CTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATaGGGTTTGACGGGAGCTCCTGAAGACATAGCTGTG +
Preference number: 3 (lower is better)
Translates to: LSGLACLGAPQL*GLTGAPEDIAV
Trigger: CACAGCTATGTCTTCAGGAGCTCCCGTCAAACCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp GGGCTGCGCTTCTTCACCTGCCCCTTAGGTTGCTTGTaGACGCAAGTGTCTGGGTTGTGGGAGGCTGCCAAG +
Preference number: 3 (lower is better)
Translates to: GLRFFTCPLGCL*TQVSGLWEAAK
Trigger: CTTGGCAGCCTCCCACAACCCAGACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTGAAGAAGCGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp CTCCGGCGGATACCTAATGCCCCTGGTGGGCACATCTaGTGGCAGGTCTGGAGGAAAGTTGTGGAAGGTCTC +
Preference number: 3 (lower is better)
Translates to: LRRIPNAPGGHI*WQVWRKVVEGL
Trigger: GAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp TTGGCAGGACTGTGTTTCCTTCATGAGGTTGAAAACTaGCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: LAGLCFLHEVEN*PRQALPGQLAG
Trigger: CCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCCTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTaGTCCCAGCCTGCACGTGAAGAGATGCAAAGTGAA +
Preference number: 3 (lower is better)
Translates to: RCSHLHSPRCLR*SQPAREEMQSE
Trigger: TTCACTTTGCATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGTTGTaGAAGGTCTCACCAGTGACCAGAGAGGTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: VGTSAGRSGGKL*KVSPVTREVRG
Trigger: GCCCCTCACCTCTCTGGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTaGCTGGGCCGAGGAGACAGAGACCATGTTCTTCTA +
Preference number: 3 (lower is better)
Translates to: LKTALGRPCRDS*LGRGDRDHVLL
Trigger: TAGAAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGTCTGCTTCCGTTTCGTaGACGATTACCAACTGGTCA +
Preference number: 3 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVSASVS*TITNWS
Trigger: TGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGA...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CAA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACATCTGGGTCCTTGCTaGTACACACCCAGTCCGAAT +
Preference number: 3 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEHLGPC*YTPSPN
Trigger: ATTCGGACTGGGTGTGTACAAGCAAGGACCCAGATG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACACGGTGGTCGTGGTTaGTCCTTCCTTTGGGTTTCT +
Preference number: 3 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEHGGRG*SFLWVS
Trigger: AGAAACCCAAAGGAAGGACAAACCACGACCACCGTG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCGCAGGGATAGGTGGTaGAGATGGCTGCTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLRRDRW*RWLLGA
Trigger: GGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp CAGTCACCTTTAATCCTCTGCTGGTCCTCCCGGGCATaGTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAG +
Preference number: 3 (lower is better)
Translates to: QSPLILCWSSRA*CPALTKTSLLQ
Trigger: CTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCTCCTGGCCACGTTCTaGCTGGGCTTAGAGTCTGCT +
Preference number: 3 (lower is better)
Translates to: GLAPRPPYISKASGSPGYLLATF*LGLESA
Trigger: AGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR-3UTR CAA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCGATGCATCTGGGTCCTaGCTTGTACACACCCAGTCC +
Preference number: 3 (lower is better)
Translates to: PSLPGILQMATVVVVCPSDASGS*LVHTQS
Trigger: GGACTGGGTGTGTACAAGCAAGGACCCAGATGCATC...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTaGTTTGTCCTTCCTTTGGGTTTCTGCCCATGTGGC +
Preference number: 3 (lower is better)
Translates to: LFQGFCRWPRWS*FVLPLGFCPCG
Trigger: GCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CGGAGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTaGGAGGAGACGCCCTCATATGGAAGGAGTGGACAG +
Preference number: 3 (lower is better)
Translates to: RRSRVRDELWQK*EETPSYGRSGQ
Trigger: CTGTCCACTCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR GCA 72 bp TGCGCTCCTGGCCACGTTCTTGCTGGGCTTAGAGTCTaGTTCCGTTTCGTTGACGATTACCAACTGGTCAGG +
Preference number: 3 (lower is better)
Translates to: CAPGHVLAGLRV*FRFVDDYQLVR
Trigger: CCTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR GCA 72 bp CTGGGCCGAGGAGACAGAGACCATGTTCTTCTAAAATaGAGGTGGCAAAAGATCTCAGCGCGGCTCCCGAGA +
Preference number: 3 (lower is better)
Translates to: LGRGDRDHVLLK*RWQKISARLPR
Trigger: TCTCGGGAGCCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAGAACATGGTCTCTGTCTCCTCGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp GTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTaGAGCCATGAAGGCTGGGTGGGCACAGCTACCCAG +
Preference number: 3 (lower is better)
Translates to: VRFLYGSKGPCT*SHEGWVGTATQ
Trigger: CTGGGTAGCTGTGCCCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp TGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTaGTCAGTGGTTACAAGACCAGTTGGAGCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: CCPALTKTSLLQ*SVVTRPVGAQR
Trigger: TCTCTGGGCTCCAACTGGTCTTGTAACCACTGAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp CCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTaGGGCCAGCCCTGCTCCCTGACTTGGCAAACCCAG +
Preference number: 3 (lower is better)
Translates to: PQQYSKPRFGSS*GQPCSLTWQTQ
Trigger: CTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GGGTCCTTTGAAGCCAAAATGGCTGGTGGCCTCCAATaGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: GSFEAKMAGGLQ*AGSQTSLHKQS
Trigger: GCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCCATTGGAGGCCACCAGCCATTTTGGCTTCAAAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTaGGAGTTCCTGCGGCCAGCCCTGCTCCCTGACTTG +
Preference number: 3 (lower is better)
Translates to: EHTSTTIFKAKV*EFLRPALLPDL
Trigger: CAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp TCTCGGCACATGTGGGCACACACAGTCGAGGGCAGGTaGCGTAGAGGGTGTCTTCCTTTGATTTCCATCATG +
Preference number: 3 (lower is better)
Translates to: SRHMWAHTVEGR*RRGCLPLISIM
Trigger: CATGATGGAAATCAAAGGAAGACACCCTCTACGTCACCTGCCCTCGACTGTGTGTGCCCACATGTGCCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CGAGGAGACAGAGACCATGTTCTTCTAAAATGCAGGTaGCAAAAGATCTCAGCGCGGCTCCCGAGACTACCC +
Preference number: 3 (lower is better)
Translates to: RGDRDHVLLKCR*QKISARLPRLP
Trigger: GGGTAGTCTCGGGAGCCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAGAACATGGTCTCTGTCTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp TTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTaGTCGTGGTTTGTCCTTCCTTTGGGTTTCTGCCCA +
Preference number: 3 (lower is better)
Translates to: FLLFQGFCRWPR*SWFVLPLGFCP
Trigger: TGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp TCCGTTTCGTTGACGATTACCAACTGGTCAGGAAGGTaGGGCTTAGGCAGTTCTGGACTCATGGGGGCATCT +
Preference number: 3 (lower is better)
Translates to: SVSLTITNWSGR*GLGSSGLMGAS
Trigger: AGATGCCCCCATGAGTCCAGAACTGCCTAAGCCTCACCTTCCTGACCAGTTGGTAATCGTCAACGAAACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR TCA 72 bp CCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTaGGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCT +
Preference number: 3 (lower is better)
Translates to: PSFGFLPMWPPF*AVRFLYGSKGP
Trigger: AGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GCATCTGGGTCCTTGCTTGTACACACCCAGTCCGAATaGGGAAGGGAACCATGGGGTTTCCATATTCAGATC +
Preference number: 3 (lower is better)
Translates to: ASGSLLVHTQSE*GREPWGFHIQI
Trigger: GATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTGTACAAGCAAGGACCCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACGGGCTGTGTTTAATCTaGCGCTGTGCTTTGACAAAT +
Preference number: 3 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHGLCLI*RCALTN
Trigger: ATTTGTCAAAGCACAGCGCAAGATTAAACACAGCCC...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR CAA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATCAGCACGGCCTTCTTTaGAAGTCTCACTTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: RSRVRDELWQKWEETPSYQHGLL*KSHFFR
Trigger: CCTGAAGAAGTGAGACTTCAAAAGAAGGCCGTGCTG...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR TCA 72 bp TTCATTTCCACCCTCGTGTTCAGTACCCACGAAGCATaGGTCATGCTGGCGAAAGCAGGTACTTCCCTAGAG +
Preference number: 3 (lower is better)
Translates to: FISTLVFSTHEA*VMLAKAGTSLE
Trigger: CTCTAGGGAAGTACCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTaGTATAGCAGAAAACCATTCAGCCCTCTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: LEKSFHDGRPLG*YSRKPFSPLSS
Trigger: AGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR GCA 72 bp TTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTaGGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCT +
Preference number: 3 (lower is better)
Translates to: LGFCPCGPLSEL*VFSMEAKVLVP
Trigger: AGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp CTTGTACACACCCAGTCCGAATGGGGAAGGGAACCATaGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: LVHTQSEWGREP*GFHIQISSSSR
Trigger: TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTGTACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CCA 72 bp GACATGTCAGAACAGGAAGGGGAGAACTCGGTCTTCTaGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCA +
Preference number: 3 (lower is better)
Translates to: DMSEQEGENSVF*RSGPFHSDKSA
Trigger: TGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCCAGAAGACCGAGTTCTCCCCTTCCTGTTCTGACATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR CAA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGGGAAGCTGTCTCTGTTaGGTTTTGGTGAAGAGAAAT +
Preference number: 3 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWGSCLC*VLVKRN
Trigger: ATTTCTCTTCACCAAAACCAAACAGAGACAGCTTCC...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR-3UTR CAA 90 bp TGTCAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGAGTTTGGGTTTCAGAATaGCAGAGAAGGGGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: CQLGREQLKPNTEFLQKRVWVSE*QRRGGG
Trigger: GCCACCACCCCTTCTCTGCAATTCTGAAACCCAAAC...TCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459723.1
3UTR CCA 72 bp AGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTaGTCCAATTCTTCTGTGCACACTGGGGCTGGTGAC +
Preference number: 3 (lower is better)
Translates to: SLLFYKFLRTVT*SNSSVHTGAGD
Trigger: GTCACCAGCCCCAGTGTGCACAGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp GAACTCGGTCTTCTGGAGAAGTGGTCCTTTCCACTCTaGCAAATCAGCAATGGACTTTCCATTCAAGTTTCT +
Preference number: 3 (lower is better)
Translates to: ELGLLEKWSFPL*QISNGLSIQVS
Trigger: AGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCCAGAAGACCGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR-3UTR CAA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAGTAGAAAGGAACATCTaGGGGGCTGTGTCTGATGCA +
Preference number: 3 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSVERNI*GAVSDA
Trigger: TGCATCAGACACAGCCCCCAAGATGTTCCTTTCTAC...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR TCA 72 bp GCATCAATGACTCTAATAAACCCGCCCATAAATACCTaGAGGCAGGTTTTGGTTTTGCCATCATACGAGTTA +
Preference number: 3 (lower is better)
Translates to: ASMTLINPPINT*RQVLVLPSYEL
Trigger: TAACTCGTATGATGGCAAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATTGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459723.1
3UTR CCA 72 bp ATTCTGAGAAGTTCTTCCACATACCCAACAAATCTCTaGAAAACCAAACCAAACACTAAAGGGAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: ILRSSSTYPTNL*KTKPNTKGKAK
Trigger: TTTGGCTTTCCCTTTAGTGTTTGGTTTGGTTTTCCAGAGATTTGTTGGGTATGTGGAAGAACTTCTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR CCA 72 bp ACAGATCCATACTTAACTCCTTATCCTAAACCTCTGTaGCCAGATATGTCTTGGAATTTAGAATCTTTAGGA +
Preference number: 3 (lower is better)
Translates to: TDPYLTPYPKPL*PDMSWNLESLG
Trigger: TCCTAAAGATTCTAAATTCCAAGACATATCTGGCCACAGAGGTTTAGGATAAGGAGTTAAGTATGGATCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCGGAGCGCTGCACTGTaGGGTCGCTGCTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSRSAAL*GRCCPG
Trigger: GCCGGGGCAGCAGCGACCCCACAGTGCAGCGCTCCG...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGGCGGGGGCATGCCGGTaGGGCTGCGGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPAGACR*GCGGCG
Trigger: CCCACAGCCTCCGCAGCCTCACCGGCATGCCCCCGC...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGAGGGAAATGGTGGGCTaGCGGGCAGGGACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLREMVG*RAGTRL
Trigger: CAGCCTCGTCCCTGCCCGGCAGCCCACCATTTCCCT...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGCCACGGCGAAGCCTaGCACCTTGTCCACCGATGC +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLGHGEA*HLVHRC
Trigger: GCATCGGTGGACAAGGTGCCAGGCTTCGCCGTGGCC...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTGGGGAGCGCCTCAGCTaGCCCCATCTGACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSGERLS*PHLTCW
Trigger: CCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCC...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCAGGGCTTCTAAGGACTaGGGCCTGTCCCCATGGGCG +
Preference number: 4 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLARASKD*GLSPWA
Trigger: CGCCCATGGGGACAGGCCTCAGTCCTTAGAAGCCCT...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVALWGRC*PGAPGR
Trigger: ACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGCCGGTGCAGTCATCTaGATTCGCCGCGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLAGAVI*IRRGVS
Trigger: GGAGACACCGCGGCGAATGCAGATGACTGCACCGGC...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAGGTGCCGGTGGGTCCTaGCACCCGGGGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAGAGGS*HPGLRD
Trigger: GTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACC...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCAGGCCGGATGGGTCTGTaGGGGCTGACCTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSGRMGL*GLTSDL
Trigger: GAGGTCTGAGGTCAGCCCCCACAGACCCATCCGGCC...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTGGGAGGCCCCGGCACTaGCTCAGTCCTCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLGRPRH*LSPQRC
Trigger: GCACCGCTGAGGACTGAGTCAGTGCCGGGGCCTCCC...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGAGAGGAAGAAAGAGGTaGCGGTGGGTCCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLRGRKR*RWVLPP
Trigger: GGGTGGCAGGACCCACCGGCACCTCTTTCTTCCTCT...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGTGGGTTGTGGGAGGCTaGCAAGGCTCCGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRWVVGG*QGSGRG
Trigger: CCCTCTCCCGGAGCCTTGGCAGCCTCCCACAACCCA...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTGTTGCGGGAAGTCTTaGCATGGCCCCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCCCGKS*HGPRPP
Trigger: GGGTGGGCGGGGGCCATGGCAAGACTTCCCGCAACA...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGGGCCACGGCGAAGCCTaGCACCTTGTCCACCGATGC +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRGHGEA*HLVHRC
Trigger: GCATCGGTGGACAAGGTGCCAGGCTTCGCCGTGGCC...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGGGGCTGTGGAGGGGGTaGAGGACGAGCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVGLWRG*RTSWCL
Trigger: GAGGCACCAGCTCGTCCTCCACCCCCTCCACAGCCC...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTAGAGCAGGGAAATGGTaGGCTGCCGGGCAGGGACGA +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSRAGKW*AAGQGR
Trigger: TCGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCT...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGAGGCAGCTCCCTGAGTaGCCGGTGCAGTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLRQLPE*PVQSSA
Trigger: TGCAGATGACTGCACCGGCCACTCAGGGAGCTGCCT...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCACAGCTGGAGGGGAACTaGCTCTGGGCCATCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSQLEGN*LWAISR
Trigger: CCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTG...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCAACACAGGCTGCCTGCTaGGTGTGGCGTGTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSTQAAC*VWRVPS
Trigger: AGACGGGACACGCCACACCCAGCAGGCAGCCTGTGT...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTGTCAGCCGTGTCCTCGCAGAGCAGGGAAATGGTGGGCTGCCGGGCAGGGACGGGTGGCCCACCCGTGTaGCATGGAGTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSAVSSQSREMVGCRAGTGGPPV*HGVSCR
Trigger: CCTGCAGCTCACTCCATGCCACACGGGTGGGCCACC...CGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCTGCGAGGACACGGCTGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCGCGATGGTGAAGGCTaGCCCTTCCTGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGARDGEG*PFLPGG
Trigger: TCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCG...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCAGGGAAGGGCTTGGAATaGGGGCTGGACGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSGKGLE*GLDAGL
Trigger: CAAGCCTGCGTCCAGCCCCCATTCCAAGCCCTTCCC...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGCAGGGATAGGTGGTTaGGATGGCTGCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRAGIGG*DGCWGP
Trigger: CGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGC...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCAGCTGGCGGCCAGCTCTaGGAGCTTGCTACGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRCSHLHSPRCLRWSQPAAGGQL*ELATLH
Trigger: ATGGAGCGTAGCAAGCTCTCAGAGCTGGCCGCCAGC...TGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGTGGAGGACGAGCTGGTaGCTCCAGAGTCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRWRTSW*LQSRSG
Trigger: GCCACTGCGACTCTGGAGGCACCAGCTCGTCCTCCA...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGCACAGGCTCAGCACATaGAGCCTCTTCGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRHRLST*SLFAHG
Trigger: CCCGTGGGCGAAGAGGCTGCATGTGCTGAGCCTGTG...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTGCTCCCAGTGTGTCTTaGCAGTCAGCGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCAPSVS*QSAALG
Trigger: CCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGC...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTAAACCCAGCCGGAGGTaGACAGGGGAAGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCKPSRR*TGEGWT
Trigger: GGTCCACCCTTCCCCTGTGCACCTCCGGCTGGGTTT...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACGGCAGAGGAGGGGCTaGTCACGGAGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPERQRRG*SRRPLL
Trigger: GAGGAGGGGCCTCCGTGAGCAGCCCCTCCTCTGCCG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGATGCGCCTTGCCTGGATaGGGCCTTTGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGCALPG*GLWPGA
Trigger: AGCGCCTGGCCAAAGGCCGCATCCAGGCAAGGCGCA...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGGGCTGGGGGACAGGCTaGCTGTCTCCACGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMGWGTG*LSPRLR
Trigger: GCGCAGCCGTGGAGACAGCCAGCCTGTCCCCCAGCC...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGCCAGTCAGCGGCACTaGGGTCCCTACCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLASQRH*GPYQRG
Trigger: GCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGCAGCTGGAGGGGAACTaGCTCTGGGCCATCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRQLEGN*LWAISR
Trigger: CCGAGAGATGGCCCAGAGCCAGTTCCCCTCCAGCTG...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGCCATGCCCTTGCAGCTaGAGGGGAACTGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRPCPCS*RGTGSG
Trigger: CCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGG...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGGCCGCTGGCCCTGGTaGACTTGGGGAGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSAGRWPW*TWGGWI
Trigger: GATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCC...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGGCCACACACACAGAGGTGAGGGGCCGCTaGCCCTGGTGGACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CVLPVSGTGVPTSGATHTEVRGR*PWWTWG
Trigger: TCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTC...TGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGCTCCTGGTCACGCCTTaGGGTGGGGCAGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVLLVTP*GGAATC
Trigger: GCAAGTGGCTGCCCCACCCCAAGGCGTGACCAGGAG...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCCTGCAAGCCCACATaGGGACTGCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLAPCKPT*GLPFSW
Trigger: CCAAGAAAAGGGCAGTCCCCATGTGGGCTTGCAGGG...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGCTGGTGGCCTCCAATaGGCTGGCTCCCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGAGGLQ*AGSQTS
Trigger: GGAGGTCTGGGAGCCAGCCCATTGGAGGCCACCAGC...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAGGCCGGATGGGTCTGTaGGGGCTGACCTCAGACCTC +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAGRMGL*GLTSDL
Trigger: GAGGTCTGAGGTCAGCCCCCACAGACCCATCCGGCC...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGGTGGACCAGGGCCTaGGCCATAACTCTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLGWTRA*AITLSA
Trigger: AGCACTTAGAGTTATGGCCCAGGCCCTGGTCCACCC...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGGTCAATGCCCGTCAGTaGCGTGCCTGTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAVNARQ*RACWGQ
Trigger: CTGCCCCCAACAGGCACGCCACTGACGGGCATTGAC...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGGCGGGGGCATGCCGGTaGGGCTGCGGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLAGACR*GCGGCG
Trigger: CCCACAGCCTCCGCAGCCTCACCGGCATGCCCCCGC...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGGCGTGTCCCGTCTCCTaGTGCTGTGGTCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRACPVS*CCGPSL
Trigger: GAGAGAAGGACCACAGCATCAGGAGACGGGACACGC...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCAGCCAGGGCCAGCTTaGTCCTCTCTACCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAQPGPA*SSLPLL
Trigger: CAAGAGGGGTAGAGAGGATCAAGCTGGCCCTGGCTG...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAATGTGCCCACTGCCGCTaGGACCTGGGTGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPECAHCR*DLGEVG
Trigger: CCCCACCTCACCCAGGTCTCAGCGGCAGTGGGCACA...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGTCAGCTGGCCCCATCTaGCCTGCTGGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWESAGPI*PAGTGT
Trigger: GGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGA...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCACCTTGTCCACCGATaGAAACACGGAGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSHLVHR*KHGALH
Trigger: GTGCAGCGCTCCGTGTTTGCATCGGTGGACAAGGTG...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGGGACACCATGCCCTTaGAGCTGGAGGGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGGTPCP*SWRGTG
Trigger: GCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCC...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAACACACAGGCTGCCTaGTGGGTGTGGCGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVNTQAA*WVWRVP
Trigger: CGGGACACGCCACACCCAGCAGGCAGCCTGTGTGTT...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAAACCCAGCCGGAGGTaGACAGGGGAAGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPKPSRR*TGEGWT
Trigger: GGTCCACCCTTCCCCTGTGCACCTCCGGCTGGGTTT...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAAGGTTTGGGAGTTCCTaGGGCCAGCCCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLARFGSS*GQPCSL
Trigger: CAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGCTGGGACAGGTACCTTaGACGTCCAGAAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLLGQVP*TSRKGR
Trigger: TCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTTGGGTTGTGGGAGGCTaGCAAGGCTCCGGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLWVVGG*QGSGRG
Trigger: CCCTCTCCCGGAGCCTTGGCAGCCTCCCACAACCCA...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACGCGTCTGGCAGGGCTaGGCTTCTTCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVARVWQG*ASSPAP
Trigger: AGGGGCAGGTGAAGAAGCGCAGCCCTGCCAGACGCG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGGGGTGGAGGACGAGCTaGTGCCTCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPGWRTS*CLQSRS
Trigger: ACTGCGACTCTGGAGGCACCAGCTCGTCCTCCACCC...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGGGGGGCCGCACAGAATaGTGGGTGCTCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVGGRTE*WVLPVC
Trigger: ACACACTGGGAGCACCCACCATTCTGTGCGGCCCCC...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTCCGCGGTGTCTCCGCTaGTCCCAGCCTGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLPRCLR*SQPARE
Trigger: TTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGG...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAGCCATGAAGGCTGGGTaGGCACAGCTACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAAMKAG*AQLPRG
Trigger: CCCTCTGGGTAGCTGTGCCCACCCAGCCTTCATGGC...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGGCAGGCTGTTCCTCCTaGTCACGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGAGCSS*SRLGVG
Trigger: CCCCACCCCAAGGCGTGACCAGGAGGAACAGCCTGC...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGCTGACAGCAGGCTGGTaGCCCACCCGTGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSALTAGW*PTRVAW
Trigger: CCATGCCACACGGGTGGGCCACCAGCCTGCTGTCAG...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGCTTCTGACAGCAGGCTaGTGGCCCACCCGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRLLTAG*WPTRVA
Trigger: TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAG...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCTTTAATCCTCTGCTaGTCCTCCCGGGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLAPLILC*SSRACC
Trigger: ACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGG...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGACTGCCGCTGAGACCTaGGTGAGGTGGGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGATAAET*VRWGPL
Trigger: CAAAGGACCCCACCTCACCCAGGTCTCAGCGGCAGT...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGGGACAGGCTGGCTGTCTCCACGGCTGCGCTCCTGGCCACGTTCTTGCTGGGCCCCATCTGACCTGCTaGGACAGGTACCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: GGQAGCLHGCAPGHVLAGPHLTC*DRYLAR
Trigger: ACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGG...CCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGGAGACAGCCAGCCTGTCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGCAGTGGCGTGCCTGTTaGGGGCAGCAGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGQWRAC*GQQDGG
Trigger: GCCTCCATCCTGCTGCCCCCAACAGGCACGCCACTG...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
3UTR CAA 72 bp GTTTGGGAGTTCCTGCGGCCAGCCCTGCTCCCTGACTaGGCAAACCCAGCCGGAGGTGCACAGGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: VWEFLRPALLPD*ANPAGGAQGKG
Trigger: ACCCTTCCCCTGTGCACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGGAGGGTGGCGACTGTaGGGACAGGGACGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKGGWRL*GQGRGA
Trigger: AGCTCCCCGTCCCTGTCCTCACAGTCGCCACCCTCC...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGCAGGGATAGGTGGTTaGGATGGCTGCTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLAGIGG*DGCWGP
Trigger: CGGCCCCCAGCAGCCATCTCAACCACCTATCCCTGC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGGCCCAGGCAGCTCCCTaGGTGGCCGGTGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWAQAAP*VAGAVI
Trigger: GATGACTGCACCGGCCACTCAGGGAGCTGCCTGGGC...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCTTGGGGGCTGTGTCTaGTGCATCTGGGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGALGGCV*CIWVLA
Trigger: AGCAAGGACCCAGATGCATCAGACACAGCCCCCAAG...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGTTGTACCTGCAGCCATaGAGGCTGGGTGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVLYLQP*RLGGHS
Trigger: GCTGTGCCCACCCAGCCTTCATGGCTGCAGGTACAA...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGGCGTGTCCCGTCTCCTaGTGCTGTGGTCCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEACPVS*CCGPSL
Trigger: GAGAGAAGGACCACAGCATCAGGAGACGGGACACGC...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTTTTGACGGGAGCTCCTaGAGACATAGCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSFDGSS*RHSCAH
Trigger: GTGGGCACAGCTATGTCTTCAGGAGCTCCCGTCAAA...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCATCTGAGGCTATGACCTaGGTGTCAGAAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSSEAMT*VSEATA
Trigger: GGCTGTGGCTTCTGACACTCAGGTCATAGCCTCAGA...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCACTGACCTCAGACCTCTaGGGCTATGACCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSLTSDL*GYDLSV
Trigger: GACACTCAGGTCATAGCCTCAGAGGTCTGAGGTCAG...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGTCAGCTGGCCCCATCTaGCCTGCTGGGACAGGTACC +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGSAGPI*PAGTGT
Trigger: GGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGA...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGGGCGCTGCTTGGCGATaGTGCAGCGGATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGGAAWR*CSGCGL
Trigger: CAGACCACATCCGCTGCATCATCGCCAAGCAGCGCC...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGTCCAATTCTTCTGTaGACACTGGGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: GWPFLPGGAPQLAPSDLLGPILL*TLGLVT
Trigger: TGTCACCAGCCCCAGTGTGCACAGAAGAATTGGACC...CAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGCATGAGGTTGAAAACTaGCCTCGGCAGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRHEVEN*PRQALP
Trigger: CGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGGCTCTTCCTCTGGATaGCAGGGGCCCAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RWLLGAAQNGGCSQCVLPGSSSG*QGPSVS
Trigger: GGACACGCTGGGCCCCTGGCATCCAGAGGAAGAGCC...TGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGACGTCTCACGGTCTCATaGCGGACCAGCAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERRLTVS*RTSRAA
Trigger: GGCCGCTCTGCTGGTCCGGCATGAGACCGTGAGACG...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGGTCTGCTCCATTGCGTaGTCTCAGAGCAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPVCSIA*SQSRWR
Trigger: CCGCCACCTGCTCTGAGAGCACGCAATGGAGCAGAC...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAGCCACTCCTGACTGCTaGACTCTGGGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAATPDC*TLGCGG
Trigger: CCCTCCACAGCCCAGAGTCCAGCAGTCAGGAGTGGC...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGGAGCGCAGGGATAGGTaGTTGAGATGGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEERRDR*LRWLLG
Trigger: CCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTC...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGCCGCGGTGTCTCCGCTaGTCCCAGCCTGCACGTGAA +
Preference number: 4 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMPRCLR*SQPARE
Trigger: TTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGG...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGGGTGGATCACGGCCTaGGCTGTGAGTGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRGWITA*AVSAVS
Trigger: AGACACAGCACTCACAGCCCAGGCCGTGATCCACCC...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAAGGGGCCGCTGGCCCTaGTGGACTTGGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPRGRWP*WTWGGW
Trigger: CCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCT...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGTGCAGCCATGAAGGCTaGGTGGGCACAGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVCSHEG*VGTATQ
Trigger: CTGGGTAGCTGTGCCCACCCAGCCTTCATGGCTGCA...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGAGCAGGCTGTTCCTCCTaGTCACGCCTTGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERAGCSS*SRLGVG
Trigger: CCCCACCCCAAGGCGTGACCAGGAGGAACAGCCTGC...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTCCCTGCAAGCCCACATaGGGACTGCCCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCPCKPT*GLPFSW
Trigger: CCAAGAAAAGGGCAGTCCCCATGTGGGCTTGCAGGG...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGAGTGTCCTGTCTGGACTaGCCTGTCTGGGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERVSCLD*PVWERP
Trigger: GGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACAC...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGACAAGTGTCTGGGTTGTaGGAGGCTGCCAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGQVSGL*EAAKAP
Trigger: CGGAGCCTTGGCAGCCTCCCACAACCCAGACACTTG...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCAGCGGGTGGTTGTAGGTaGTCTTCTCGGCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: GRCSHLHSPRCLRWSQPAAGGCR*SSRPHL
Trigger: CAAATGCGGCCGAGAAGACCACCTACAACCACCCGC...TGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGCATGGGGGCATCTGCTaGACTCTGGGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSAHGGIC*TLGCGG
Trigger: CCCTCCACAGCCCAGAGTCCAGCAGATGCCCCCATG...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGCTTGGGGGCTGTGTCTaGTGCATCTGGGTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVLGGCV*CIWVLA
Trigger: AGCAAGGACCCAGATGCATCAGACACAGCCCCCAAG...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTGAGGCTATGACCTaGGTGTCAGAAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCSEAMT*VSEATA
Trigger: GGCTGTGGCTTCTGACACTCAGGTCATAGCCTCAGA...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGGCAGCGGATGTGGTCTaGGAAGATGAAGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPAADVV*EDEGGL
Trigger: CAGGCCACCTTCATCTTCTCAGACCACATCCGCTGC...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNLWGRC*PGAPGR
Trigger: ACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCACCTTGTCCACCGATaGAAACACGGAGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEHLVHR*KHGALH
Trigger: GTGCAGCGCTCCGTGTTTGCATCGGTGGACAAGGTG...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGGGACACCATGCCCTTaGAGCTGGAGGGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLGTPCP*SWRGTG
Trigger: GCCAGTTCCCCTCCAGCTGCAAGGGCATGGTGTCCC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACTCTTCCAGGGATTCTaGAGATGGCCACGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLALFQGF*RWPRWS
Trigger: CGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAG...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGTGGCATGGAGTGAGCTaGAGGCTGTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEWHGVS*RLFLLV
Trigger: GACCAGGAGGAACAGCCTGCAGCTCACTCCATGCCA...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTCCCCCAGACGCAAGTTaGCAGCCCCAGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLPPDAS*QPQLKE
Trigger: CTCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGG...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGATCCTGCGGCCAGCCCTaGTCCCTGACTTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERSCGQP*SLTWQT
Trigger: GGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGA...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCTCCTGCGGCCAGCCCTaGTCCCTGACTTGGCAAACC +
Preference number: 4 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPSCGQP*SLTWQT
Trigger: GGTTTGCCAAGTCAGGGAGCAGGGCTGGCCGCAGGA...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCCGGCAGAGGAGGGGCTaGTCACGGAGGCCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSRQRRG*SRRPLL
Trigger: GAGGAGGGGCCTCCGTGAGCAGCCCCTCCTCTGCCG...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGCGCGTCTGGCAGGGCTaGGCTTCTTCACCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWRVWQG*ASSPAP
Trigger: AGGGGCAGGTGAAGAAGCGCAGCCCTGCCAGACGCG...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGGCTCCCCTCGCAATTaGAGTGACAGGGAACGCAGC +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSAGSPRN*SDRERS
Trigger: GCTGCGTTCCCTGTCACTGCAATTGCGAGGGGAGCC...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCGGAGCGCTGCACTGTaGGGTCGCTGCTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNRSAAL*GRCCPG
Trigger: GCCGGGGCAGCAGCGACCCCACAGTGCAGCGCTCCG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGGCCGCACAGAATGGTaGGTGCTCCCAGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGGRTEW*VLPVCL
Trigger: AAGACACACTGGGAGCACCCACCATTCTGTGCGGCC...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGATCTCTCGGCACATGTaGGCACACACAGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPISRHM*AHTVEG
Trigger: GCCCTCGACTGTGTGTGCCCACATGTGCCGAGAGAT...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGACAGACTCAGAGCTCTaGGGACACCATGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRTDSEL*GHHALA
Trigger: TGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGT...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCAGTCTGGCTCCCGAGCTaGCCGAGTAGAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: GRCSHLHSPRCLRWSQPAVWLPS*PSRKEH
Trigger: ATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGAC...TGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAATGGACTTGGGGAGGGTaGATCACGGCCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEWTWGG*ITAWAV
Trigger: CACAGCCCAGGCCGTGATCCACCCTCCCCAAGTCCA...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAAGGGGCCGCTGGCCCTaGTGGACTTGGGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGRGRWP*WTWGGW
Trigger: CCACCCTCCCCAAGTCCACCAGGGCCAGCGGCCCCT...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTGGCCACGGTGGTCGTaGTTTGTCCTTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCWPRWS*FVLPLG
Trigger: ACCCAAAGGAAGGACAAACCACGACCACCGTGGCCA...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAACTGACAGCAGGCTGGTaGCCCACCCGTGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKLTAGW*PTRVAW
Trigger: CCATGCCACACGGGTGGGCCACCAGCCTGCTGTCAG...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCCTTCTGACAGCAGGCTaGTGGCCCACCCGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLLLTAG*WPTRVA
Trigger: TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAG...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACTCACCCCACACACCTaGAGGTGTCCCCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPELTPHT*RCPPDA
Trigger: TGCGTCTGGGGGACACCTCCAGGTGTGTGGGGTGAG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCAGTGAACGCAAGTGTCTaGGTTGTGGGAGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GRCSHLHSPRCLRWSQPAVNASV*VVGGCQ
Trigger: TTGGCAGCCTCCCACAACCCAGACACTTGCGTTCAC...TGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGGGCTGTCCAGCGCGTaGTACACCATATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGGLSSA*YTISRK
Trigger: CTTCCTGGATATGGTGTACCACGCGCTGGACAGCCC...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACTTCTCGGCCGCATTTaGCACGGGGAGCTGGATTCG +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVALLGRI*HGELDS
Trigger: CGAATCCAGCTCCCCGTGCCAAATGCGGCCGAGAAG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCGGATGGGGAAGGGCTTaGAATGGGGGCTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLGWGRA*NGGWTQ
Trigger: CTGCGTCCAGCCCCCATTCCAAGCCCTTCCCCATCC...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAAATGAGGAAGCGTCCTaGGTGGGGAGCTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGNEEAS*VGSWLH
Trigger: ATGTAGCCAGCTCCCCACTCAGGACGCTTCCTCATT...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGACAGCCAGGGCCAGCTTaGTCCTCTCTACCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERQPGPA*SSLPLL
Trigger: CAAGAGGGGTAGAGAGGATCAAGCTGGCCCTGGCTG...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGGAGCGCCCCAGCTATaGGGTTTGACGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKGAPQL*GLTGAP
Trigger: AGGAGCTCCCGTCAAACCTCATAGCTGGGGCGCTCC...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGTTCTCTGCATCTTCATaGGCCTTGCCTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEFSASS*ALPGCG
Trigger: GCCGCATCCAGGCAAGGCGCATGAAGATGCAGAGAA...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGLWGRC*PGAPGR
Trigger: ACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAG...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTAGGGAAATGGTGGGCTaGCGGGCAGGGACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSREMVG*RAGTRL
Trigger: CAGCCTCGTCCCTGCCCGGCAGCCCACCATTTCCCT...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATGGTGCCGGTGGGTCCTaGCACCCGGGGCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNGAGGS*HPGLRD
Trigger: GTCTCTGAGCCCCGGGTGGCAGGACCCACCGGCACC...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTGCCCTCGGCAGGCCTTaGCGGGACAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSALGRP*RDSWLG
Trigger: GCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGC...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTCTTCCTTTGGGTTTCTaGCCATGTGGCCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCLPLGF*PCGPLS
Trigger: AGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAG...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGTGGCATGGAGTGAGCTaGAGGCTGTTCCTCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGWHGVS*RLFLLV
Trigger: GACCAGGAGGAACAGCCTGCAGCTCACTCCATGCCA...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTTGGCCCCATCTGACCTaGTGGGACAGGTACCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLWPHLT*WDRYLA
Trigger: TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCA...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCTTCACGAAGTCAATaGCCGTCAGTGGCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSAASRSQ*PSVACL
Trigger: CAGGCACGCCACTGACGGGCATTGACTTCGTGAAGC...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACGGAGCGCTGCACTGTaGGGTCGCTGCTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGRSAAL*GRCCPG
Trigger: GCCGGGGCAGCAGCGACCCCACAGTGCAGCGCTCCG...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAAGAAAGAGGTGCCGGTaGGTCCTGCCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPRKRCR*VLPPGA
Trigger: AGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCT...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAAGCGTCCTGAGTaGGGAGCTGGCTACATTCCT +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPRKRPE*GAGYIP
Trigger: AGGAATGTAGCCAGCTCCCCACTCAGGACGCTTCCT...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAAGGAAGCGTCCTGAGTaGGGAGCTGGCTACATTCCT +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLARKRPE*GAGYIP
Trigger: AGGAATGTAGCCAGCTCCCCACTCAGGACGCTTCCT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACACACCCAGTCCGAATaGGGAAGGGAACCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAHTQSE*GREPWG
Trigger: ACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACTCTCTGCAGGGACTTaGGGGGCGGGCCGGATGGGT +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGLSAGT*GAGRMG
Trigger: ACCCATCCGGCCCGCCCCCCAAGTCCCTGCAGAGAG...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGTTCAAAGCCAAGGTTTaGGAGTTCCTGCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRFKAKV*EFLRPA
Trigger: GGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAA...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTAGCCTGTTGAGCAGGTaGTCAGTGAGCACATCGTTG +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCSLLSR*SVSTSL
Trigger: CAACGATGTGCTCACTGACCACCTGCTCAACAGGCT...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGCTTGGGCATCCTCGGTaGGCCCTTTCTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVLGHPR*ALSPHL
Trigger: AAGATGAGGAGAAAGGGCCCACCGAGGATGCCCAAG...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCTTCTCGGCGTCTTCTTaGGCATCCTCGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLFSASS*ASSVGP
Trigger: AGGGCCCACCGAGGATGCCCAAGAAGACGCCGAGAA...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGCATGCTGTCCAGCCCTaGCCAAGACCTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMHAVQP*PRPLSF
Trigger: GAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATG...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATTGTGCCCACTGCCGCTaGGACCTGGGTGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYCAHCR*DLGEVG
Trigger: CCCCACCTCACCCAGGTCTCAGCGGCAGTGGGCACA...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTCCCAGCTATGAGGTTTaGCGGGAGCTCCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLPSYEV*RELLKT
Trigger: TGTCTTCAGGAGCTCCCGTCAAACCTCATAGCTGGG...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGTACCCACGAAGCATaGGTCATGCTGGCGAAAGCA +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPSTHEA*VMLAKA
Trigger: TGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACT...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTGGTGCACGTCCTTCATaGTGCAGCCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLGARPS*CSQHSS
Trigger: TGATGAGTGCTGGCTGCATCATGAAGGACGTGCACC...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCATTCTCTGCATCTTCATaGGCCTTGCCTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAFSASS*ALPGCG
Trigger: GCCGCATCCAGGCAAGGCGCATGAAGATGCAGAGAA...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAATGCATCTGGGTCCTTaGTTGTACACACCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAMHLGP*LYTPSP
Trigger: CGGACTGGGTGTGTACAAGCAAGGACCCAGATGCAT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGGCCCTCGGCAGGCCTTaGCGGGACAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWALGRP*RDSWLG
Trigger: GCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGC...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAAAAGGTCCTTGTACCTaGAGCCATGAAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAKGPCT*SHEGWV
Trigger: CACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGGCCTTCTCTAGTTTCTaGTGCCCCACAGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWEAFSSF*CPTDRV
Trigger: GACTCTGTCTGTGGGGCAGCAGAAACTAGAGAAGGC...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTACCTCTCTCCTTCAGTaGTCAGTGGTTACAAGACCA +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSTSLLQ*SVVTRP
Trigger: TGGTCTTGTAACCACTGAGCACTGAAGGAGAGAGGT...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCATGGTCCTCCCGGGCATaGTGTCCAGCCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPWSSRA*CPALTK
Trigger: CTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCA...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGGCCACACACACATCACCTTTAATCCTCTaGTGGTCCTCCCGGGCATGC +
Preference number: 4 (lower is better)
Translates to: CVLPVSGTGVPTSGATHTSPLIL*WSSRAC
Trigger: GCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGA...TGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGGGCCATAACTCTAAGTaGTCTCTGCAGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPGHNSK*SLQGLG
Trigger: CCCAAGTCCCTGCAGAGAGCACTTAGAGTTATGGCC...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGTTTGCACCCGCCTCTTaGCCTTGTGCTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAFAPAS*PCACSS
Trigger: AGATGAACAAGCACAAGGGCAAGAGGCGGGTGCAAA...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGTCCACGCCAGTCACCTaGATGTCCTGCAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSASTPVT*MSCNRP
Trigger: AGGCCTATTGCAGGACATGCAGGTGACTGGCGTGGA...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCACTCATGGGGGCATCTaGTGGACTCTGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPTHGGI*WTLGCG
Trigger: TCCACAGCCCAGAGTCCAGCAGATGCCCCCATGAGT...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGTGCTGGTTTATGCACTaGGCCACGGCGAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWCWFMH*ATAKPG
Trigger: GCCAGGCTTCGCCGTGGCCCAGTGCATAAACCAGCA...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGCGCTGGGGCTCCCGCTaGCGGAGGGTGGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWRWGSR*RRVATV
Trigger: CACAGTCGCCACCCTCCGCCAGCGGGAGCCCCAGCG...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCAGAGTCGCAGTGGCTaGTGCTCCCGCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNQSRSG*CSRCRW
Trigger: CCAGCGGCAGCGGGAGCACCAGCCACTGCGACTCTG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGGGCTGTGGAGGGGGTaGAGGACGAGCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEGLWRG*RTSWCL
Trigger: GAGGCACCAGCTCGTCCTCCACCCCCTCCACAGCCC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGGATAGGTGGTTGAGATaGCTGCTGGGGGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWDRWLR*LLGAAQ
Trigger: CTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATC...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCAATTCAAGGACAACGTaGGGCTTCTTCCCATTCAAG +
Preference number: 4 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLANSRTT*GFFPFK
Trigger: CTTGAATGGGAAGAAGCCCCACGTTGTCCTTGAATT...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAAGAAAGAGGTGCCGGTaGGTCCTGCCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGRKRCR*VLPPGA
Trigger: AGCCCCGGGTGGCAGGACCCACCGGCACCTCTTTCT...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGGCCACACACACAGTCTGGCTCCCGAGCTaGCCGAGTAGAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: CVLPVSGTGVPTSGATHTVWLPS*PSRKEH
Trigger: ATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGAC...TGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACCTTGCCGGGACAGCTaGCTGGGCCGAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGPCRDS*LGRGDR
Trigger: TCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGG...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGTGCAGATGGCCACGGTaGTCGTGGTTTGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGCRWPR*SWFVLP
Trigger: AGGAAGGACAAACCACGACCACCGTGGCCATCTGCA...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACAGGGATTCTGCAGATaGCCACGGTGGTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAQGFCR*PRWSWF
Trigger: AAACCACGACCACCGTGGCCATCTGCAGAATCCCTG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAATGGCCTCCAATGGGCTaGCTCCCAGACCTCCTTACA +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEWPPMG*LPDLLT
Trigger: TGTAAGGAGGTCTGGGAGCCAGCCCATTGGAGGCCA...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGACTGCCGCTGAGACCTaGGTGAGGTGGGGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWTAAET*VRWGPL
Trigger: CAAAGGACCCCACCTCACCCAGGTCTCAGCGGCAGT...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGGTGTCCTGTCTGGACTaGCCTGTCTGGGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLVSCLD*PVWERP
Trigger: GGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACAC...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCACCAGCGTGTCCTGTCTaGACTGGCCTGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPPACPV*TGLSGS
Trigger: GCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGG...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGAAGCATGAGTCATGCTaGCGAAAGCAGGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAKHESC*RKQVLP
Trigger: GGGAAGTACCTGCTTTCGCCAGCATGACTCATGCTT...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCGGGAAGTCTTGCCATaGCCCCCGCCCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNREVLP*PPPTQL
Trigger: GAGCTGGGTGGGCGGGGGCCATGGCAAGACTTCCCG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGAGGTGGTCCAAGGAGTaGATGTTGCGGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWERWSKE*MLREVL
Trigger: CAAGACTTCCCGCAACATCCACTCCTTGGACCACCT...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGCTGGACGCAGGCTTGTaGATGGTGATGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGLDAGL*MVMFRA
Trigger: TGCCCTGAACATCACCATCCACAAGCCTGCGTCCAG...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTATGATGCAGCGGATGTaGTCTGAGAAGATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSMMQRM*SEKMKV
Trigger: CACCTTCATCTTCTCAGACCACATCCGCTGCATCAT...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
3UTR CAA 72 bp CTGGCTGTCTCCACGGCTGCGCTCCTGGCCACGTTCTaGCTGGGCTTAGAGTCTGCTTCCGTTTCGTTGACG +
Preference number: 4 (lower is better)
Translates to: LAVSTAALLATF*LGLESASVSLT
Trigger: CGTCAACGAAACGGAAGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGGAGACAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
3UTR CAA 72 bp CCCCCTCCTTGGCAGGACTGTGTTTCCTTCATGAGGTaGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PPPWQDCVSFMR*KTALGRPCRDS
Trigger: GCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCCTGCCAAGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAAATGAGGAAGCGTCCTaGGTGGGGAGCTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPENEEAS*VGSWLH
Trigger: ATGTAGCCAGCTCCCCACTCAGGACGCTTCCTCATT...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp AGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCATTTGACGGGAGCTCCTaGAGACATAGCTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RWLLGAAQNGGCSQCVLPFDGSS*RHSCAH
Trigger: GTGGGCACAGCTATGTCTTCAGGAGCTCCCGTCAAA...TGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAACCCAGCTATGAGGTTTaGCGGGAGCTCCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEPSYEV*RELLKT
Trigger: TGTCTTCAGGAGCTCCCGTCAAACCTCATAGCTGGG...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGAGACCTCTGAGGCTATaGCCTGAGTGTCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSARPLRL*PECQKP
Trigger: TGGCTTCTGACACTCAGGTCATAGCCTCAGAGGTCT...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGATGGGTCTGTGGGGGCTaGCCTCAGACCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGWVCGG*PQTSEA
Trigger: AGCCTCAGAGGTCTGAGGTCAGCCCCCACAGACCCA...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGAGATCAGGATCTCAGTaGTGGAACGGATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWERSGSQ*WNGWSP
Trigger: TGGAGACCATCCGTTCCATCACTGAGATCCTGATCT...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGTGCCGCCATCCTTGGTaGTCACTGTACATGCAATCA +
Preference number: 4 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRCRHPW*SLYMQS
Trigger: TGATTGCATGTACAGTGATCACCAAGGATGGCGGCA...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGTGGAGGACGAGCTGGTaGCTCCAGAGTCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLWRTSW*LQSRSG
Trigger: GCCACTGCGACTCTGGAGGCACCAGCTCGTCCTCCA...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGGCTGGGCTTAGAGTCTaGTTCCGTTTCGTTGACGAT +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPAGLRV*FRFVDD
Trigger: ATCGTCAACGAAACGGAAGCAGACTCTAAGCCCAGC...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCGGCTGTCTCCACGGCTaGGCTCCTGGCCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSLPGILQMATVVVVCPSGCLHG*APGHVL
Trigger: AAGAACGTGGCCAGGAGCGCAGCCGTGGAGACAGCC...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCCGGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCATTTCAAAACCAGAAGTaGATGTCTCAGGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: GRCSHLHSPRCLRWSQPAFQNQK*MSQGLA
Trigger: GGCTAGCCCCTGAGACATGCACTTCTGGTTTTGAAA...TGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTGCCTTCTCTAGTTTCTaGTGCCCCACAGACAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLAFSSF*CPTDRV
Trigger: GACTCTGTCTGTGGGGCAGCAGAAACTAGAGAAGGC...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGAAAGGCTGGCCCTTCCTaGCTGGGGGAGCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGKAGPS*LGERLS
Trigger: GCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTT...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTAAGGCTGGCCCTTCCTaGCTGGGGGAGCGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSKAGPS*LGERLS
Trigger: GCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTT...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGCGCCTCTTGCCCTTGTaGTTGTTCATCTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSARLLPL*LFISRD
Trigger: GTCCCTTGAGATGAACAAGCACAAGGGCAAGAGGCG...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATGCTCCTGCACGGAGGTaGTGGCGGCCAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYAPARR*WRPALR
Trigger: TCTCAGAGCTGGCCGCCAGCACCTCCGTGCAGGAGC...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGAAAGGGTCTGCTCCATTaGGTGCTCTCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERKGLLH*VLSEQV
Trigger: CACCTGCTCTGAGAGCACGCAATGGAGCAGACCCTT...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATGTGCGTGAGGTGCCGTaGCAGCTGCCGTTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNVREVP*QLPFGA
Trigger: TGCTCCGAACGGCAGCTGCCACGGCACCTCACGCAC...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTGCCAGTCAGCGGCACTaGGGTCCCTACCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPASQRH*GPYQRG
Trigger: GCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGC...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGGGCCGCACAGAATGGTaGGTGCTCCCAGTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWGRTEW*VLPVCL
Trigger: AAGACACACTGGGAGCACCCACCATTCTGTGCGGCC...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTCTTCACGGTCCCAACTaGTTCCTTCTTAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCLHGPN*FLLRDG
Trigger: ACCATCTCTAAGAAGGAACCAGTTGGGACCGTGAAG...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGATCTCTCGGCACATGTaGGCACACACAGTCGAGGGC +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWISRHM*AHTVEG
Trigger: GCCCTCGACTGTGTGTGCCCACATGTGCCGAGAGAT...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTGGCCGCTGGCCCTGGTaGACTTGGGGAGGGTGGATC +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSGRWPW*TWGGWI
Trigger: GATCCACCCTCCCCAAGTCCACCAGGGCCAGCGGCC...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGTGCAGTCATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGTCTGGAGGAAAGTTGTaGAAGGTCTCACCAGTGACC +
Preference number: 4 (lower is better)
Translates to: GAVICIRRGVSAGPSLHVSGGKL*KVSPVT
Trigger: GGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGA...CACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATGACTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGGCCACTCCCCCTCCTTaGCAGGACTGTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWATPPP*QDCVSF
Trigger: GAAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGC...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAGCCATGAAGGCTGGGTaGGCACAGCTACCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGAMKAG*AQLPRG
Trigger: CCCTCTGGGTAGCTGTGCCCACCCAGCCTTCATGGC...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTTGCAGCCATGAAGGCTaGGTGGGCACAGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSCSHEG*VGTATQ
Trigger: CTGGGTAGCTGTGCCCACCCAGCCTTCATGGCTGCA...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCCTTCAGTGCTCAGTaGTTACAAGACCAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PRQALPGQLAGPRRQRPCSFSAQ*LQDQLE
Trigger: CTCCAACTGGTCTTGTAACCACTGAGCACTGAAGGA...ACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGCTGGTGGCCTCCAATaGGCTGGCTCCCAGACCTCC +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEAGGLQ*AGSQTS
Trigger: GGAGGTCTGGGAGCCAGCCCATTGGAGGCCACCAGC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGGAGACCTGGGTGAGGTaGGGTCCTTTGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGETWVR*GPLKPK
Trigger: TTTTGGCTTCAAAGGACCCCACCTCACCCAGGTCTC...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGCTGGACTGGCCTGTCTaGGAGCGCCCCAGCTATGAG +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLLDWPV*ERPSYE
Trigger: CTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAG...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAAAGCATGAGTCATGCTaGCGAAAGCAGGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAKHESC*RKQVLP
Trigger: GGGAAGTACCTGCTTTCGCCAGCATGACTCATGCTT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCACCATGCTTTCAGGGTaGTTGAAAAACTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLATMLSG*LKNLMA
Trigger: AGCCATCAAGTTTTTCAACCACCCTGAAAGCATGGT...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCAGGCTTAGGCAGTTCTaGACTCATGGGGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPRLRQF*THGGIC
Trigger: GCAGATGCCCCCATGAGTCCAGAACTGCCTAAGCCT...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409790.6
3UTR CAA 72 bp TCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTaGTCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRDSADGHGGRG*SFLWVSAHVAP
Trigger: GGGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 72 bp TGGAGTGAGCTGCAGGCTGTTCCTCCTGGTCACGCCTaGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: WSELQAVPPGHA*GWGSHLPSLVS
Trigger: AGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCAGGAGGAACAGCCTGCAGCTCACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 72 bp TCTGGCAGGGCTGCGCTTCTTCACCTGCCCCTTAGGTaGCTTGTGAACGCAAGTGTCTGGGTTGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SGRAALLHLPLR*LVNASVWVVGG
Trigger: GCCTCCCACAACCCAGACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTGAAGAAGCGCAGCCCTGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTTGGGGGCATCTGAATTaGCTGTGCGTGAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSWGHLN*LCVRCR
Trigger: ACGGCACCTCACGCACAGTCAATTCAGATGCCCCCA...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR TCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAAACTGGTCAGGAAGGTaGGGCTTAGGCAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPENWSGR*GLGSSG
Trigger: TCCAGAACTGCCTAAGCCTCACCTTCCTGACCAGTT...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGACAGAGACCATGTTCTTCTGCTTCCGTTTCGTTaGCGATTACCAACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRPCRDSWLGRGDRDHVLLLPFR*RLPTGQ
Trigger: CTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAG...AAGAACATGGTCTCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTGCCCAGGCAGCTCCCTaGGTGGCCGGTGCAGTCATC +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPAQAAP*VAGAVI
Trigger: GATGACTGCACCGGCCACTCAGGGAGCTGCCTGGGC...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAACCCTCGCAATTGCAGTaGCAGGGAACGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKPSQLQ*QGTQHE
Trigger: TTCATGCTGCGTTCCCTGTCACTGCAATTGCGAGGG...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp TGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGGCCACACACACAGCTGGGCTTAGAGTCTaGTTCCGTTTCGTTGACGAT +
Preference number: 4 (lower is better)
Translates to: CVLPVSGTGVPTSGATHTAGLRV*FRFVDD
Trigger: ATCGTCAACGAAACGGAAGCAGACTCTAAGCCCAGC...TGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGGCACAGAATGGTGGGTaGTCCCAGTGTGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWAQNGG*SQCVLP
Trigger: TGGCAAGACACACTGGGAGCACCCACCATTCTGTGC...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAACCTCTCTCCTTCAGTaGTCAGTGGTTACAAGACCA +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLATSLLQ*SVVTRP
Trigger: TGGTCTTGTAACCACTGAGCACTGAAGGAGAGAGGT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCCCCCCAGACGCAAGTTaGCAGCCCCAGCTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSPPDAS*QPQLKE
Trigger: CTCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGG...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTGCTCCTGCACGGAGGTaGTGGCGGCCAGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KEWTADLWAARPSFEVSLAPARR*WRPALR
Trigger: TCTCAGAGCTGGCCGCCAGCACCTCCGTGCAGGAGC...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCCTTTGGCCAGGCGCTaGTTGGCGATGATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYPLARR*LAMMQR
Trigger: CCGCTGCATCATCGCCAAGCAGCGCCTGGCCAAAGG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCCAGAGTCGCAGTGGCTaGTGCTCCCGCTGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCQSRSG*CSRCRW
Trigger: CCAGCGGCAGCGGGAGCACCAGCCACTGCGACTCTG...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGGCTGGGGGACAGGCTaGCTGTCTCCACGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRGWGTG*LSPRLR
Trigger: GCGCAGCCGTGGAGACAGCCAGCCTGTCCCCCAGCC...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATAGAGCAGGGAAATGGTaGGCTGCCGGGCAGGGACGA +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYRAGKW*AAGQGR
Trigger: TCGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCT...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAGATAGGTGGTTGAGATaGCTGCTGGGGGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGDRWLR*LLGAAQ
Trigger: CTGTGCGGCCCCCAGCAGCCATCTCAACCACCTATC...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGGAGGTGAGGGGCCGCTaGCCCTGGTGGACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLEVRGR*PWWTWG
Trigger: TCCCCAAGTCCACCAGGGCCAGCGGCCCCTCACCTC...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGCCCGAGACTACCCTATaGCCAGGCTCCGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEPETTL*PGSGGY
Trigger: GTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGG...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAGGTTTGTCCTTCCTTTaGGTTTCTGCCCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEGLSFL*VSAHVA
Trigger: GGCCACATGGGCAGAAACCCAAAGGAAGGACAAACC...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGGTCACGCCTTGGGGTaGGGCAGCCACTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEGHALG*GSHLPS
Trigger: AGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGGGTCACGCCTTGGGGTaGGGCAGCCACTTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRGHALG*GSHLPS
Trigger: AGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACC...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAATTCAAAGCCAAGGTTTaGGAGTTCCTGCGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKFKAKV*EFLRPA
Trigger: GGCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAA...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCGCGATGGTGAAGGCTaGCCCTTCCTGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSRDGEG*PFLPGG
Trigger: TCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCG...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTCTCGGCGTCTTCTTaGGCATCCTCGGTGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHFSASS*ASSVGP
Trigger: AGGGCCCACCGAGGATGCCCAAGAAGACGCCGAGAA...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCCTCCCCAGCCAAGCCTaGACACATCAGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSLPSQA*THQAPP
Trigger: TGGTGGAGCCTGATGTGTCCAGGCTTGGCTGGGGAG...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACCTGGATGCGGCCTTTaGCCAGGCGCTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGPGCGL*PGAAWR
Trigger: TCGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGG...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACCTGGATGCGGCCTTTaGCCAGGCGCTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGPGCGL*PGAAWR
Trigger: TCGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGG...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTCATGCGCCTTGCCTaGATGCGGCCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHFMRLA*MRPLAR
Trigger: CCTGGCCAAAGGCCGCATCCAGGCAAGGCGCATGAA...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCATGCGCCTTGCCTaGATGCGGCCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSFMRLA*MRPLAR
Trigger: CCTGGCCAAAGGCCGCATCCAGGCAAGGCGCATGAA...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGGAGGGTGGCGACTGTaGGGACAGGGACGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVGGWRL*GQGRGA
Trigger: AGCTCCCCGTCCCTGTCCTCACAGTCGCCACCCTCC...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCTTTCCTGCCACTCCTaGCTGCTGGACTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYLSCHS*LLDSGL
Trigger: CAGCCCAGAGTCCAGCAGTCAGGAGTGGCAGGAAAG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR TCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCGGCCTCCGACAGGCTaGACACTCGTCGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLRPPTG*TLVGVL
Trigger: AAGGACGCCGACGAGTGTTCAGCCTGTCGGAGGCCG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR TCA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCCTGCTTCCGTTTCGTTaGCGATTACCAACTGGTCAG +
Preference number: 4 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPLLPFR*RLPTGQ
Trigger: CTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAG...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCACTGACCTCAGACCTCTaGGGCTATGACCTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPLTSDL*GYDLSV
Trigger: GACACTCAGGTCATAGCCTCAGAGGTCTGAGGTCAG...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTAATCCCACGCGATGGTaGAGGCTGGCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSNPTRW*RLALPA
Trigger: GGCAGGAAGGGCCAGCCTTCACCATCGCGTGGGATT...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTGGACATCATCAGTCTTaGTCAGGTCCTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSGHHQS*SGPPPE
Trigger: CTCGGGAGGAGGACCTGATCAAGACTGATGATGTCC...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGAGCAAACACGGAGCGCTaGACTGTGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGANTER*TVGSLL
Trigger: CAGCAGCGACCCCACAGTGCAGCGCTCCGTGTTTGC...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGAGCAAACACGGAGCGCTaGACTGTGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGANTER*TVGSLL
Trigger: CAGCAGCGACCCCACAGTGCAGCGCTCCGTGTTTGC...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTGCAAACACGGAGCGCTaGACTGTGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSANTER*TVGSLL
Trigger: CAGCAGCGACCCCACAGTGCAGCGCTCCGTGTTTGC...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATAGGGACGGGGAGCTGTaGTGGTTTATGCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNRDGEL*WFMHWA
Trigger: GGCCCAGTGCATAAACCAGCACAGCTCCCCGTCCCT...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGAGAGGAAGAAAGAGGTaGCGGTGGGTCCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRRGRKR*RWVLPP
Trigger: GGGTGGCAGGACCCACCGGCACCTCTTTCTTCCTCT...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCAAGCAACACACAGGCTaGCTGCTGGGTGTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: PSLPGILQMATVVVVCPSKQHTG*LLGVAC
Trigger: ACACGCCACACCCAGCAGGCAGCCTGTGTGTTGCTT...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCATCACCTTTAATCCTCTaGTGGTCCTCCCGGGCATGC +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPSPLIL*WSSRAC
Trigger: GCATGCCCGGGAGGACCAGCAGAGGATTAAAGGTGA...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGATGGCCCCATCTGACCTaGTGGGACAGGTACCTTGCA +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGWPHLT*WDRYLA
Trigger: TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCA...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGACGAAGCATGAGTCATaGTGGCGAAAGCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSATKHES*WRKQVL
Trigger: AAGTACCTGCTTTCGCCAGCATGACTCATGCTTCGT...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGACGAAGCATGAGTCATaGTGGCGAAAGCAGGTACTT +
Preference number: 4 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGTKHES*WRKQVL
Trigger: AAGTACCTGCTTTCGCCAGCATGACTCATGCTTCGT...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCAGGTGATCACTGTACATaGAATCAAGTCGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSGDHCT*NQVAVI
Trigger: AATAACAGCGACTTGATTGCATGTACAGTGATCACC...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGAGGGGGCCGCACAGAATaGTGGGTGCTCCCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGGGRTE*WVLPVC
Trigger: ACACACTGGGAGCACCCACCATTCTGTGCGGCCCCC...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACTACGTACAGTGACCTaGTCCAATTCTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVALRTVT*SNSSVH
Trigger: GTGCACAGAAGAATTGGACCAGGTCACTGTACGTAG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATGAGGGGAACTGGCTCTaGGCCATCTCTCGGCACATG +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYEGNWL*AISRHM
Trigger: CATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTC...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGTGTGAGTGCTGTGTCTaGCTCCCGAGCTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLECECCV*LPSWPS
Trigger: ACTCGGCCAGCTCGGGAGCCAGACACAGCACTCACA...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGATCTGCTGGCAGGTCTaGAGGAAAGTTGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMICWQV*RKVVEG
Trigger: ACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGAT...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCCTTGCCGGGACAGCTaGCTGGGCCGAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLPCRDS*LGRGDR
Trigger: TCTGTCTCCTCGGCCCAGCCAGCTGTCCCGGCAAGG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCTCCTGGTCACGCCTTaGGGTGGGGCAGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLLLVTP*GGAATC
Trigger: GCAAGTGGCTGCCCCACCCCAAGGCGTGACCAGGAG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACCCCATCTGACCTGCTaGGACAGGTACCTTGCACGT +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGPHLTC*DRYLAR
Trigger: ACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGG...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGGGGAGCGCCTCAGCTaGCCCCATCTGACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVGERLS*PHLTCW
Trigger: CCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCC...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCAAGTGTCTGGGTTGTaGGAGGCTGCCAAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNQVSGL*EAAKAP
Trigger: CGGAGCCTTGGCAGCCTCCCACAACCCAGACACTTG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTGTGAACGCAAGTGTCTaGGTTGTGGGAGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSVNASV*VVGGCQ
Trigger: TTGGCAGCCTCCCACAACCCAGACACTTGCGTTCAC...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCATTTTTGGTCAAAACGTaGTACAGATACTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSFLVKT*YRYLRW
Trigger: CCACCTCAAGTATCTGTACCACGTTTTGACCAAAAA...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGGGAAGGGCTTGGAATaGGGGCTGGACGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVGKGLE*GLDAGL
Trigger: CAAGCCTGCGTCCAGCCCCCATTCCAAGCCCTTCCC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR CAA 72 bp CTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAGTaGTGGAAGGTCTCACCAGTGACCAGAGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LVGTSAGRSGGK*WKVSPVTREVR
Trigger: CCTCACCTCTCTGGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
3UTR CAA 72 bp TGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCTTaGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: CRWPRWSWFVLP*GFCPCGPLSEL
Trigger: CAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGACAAACCACGACCACCGTGGCCATCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGGTTGCCAGCCCCAGCTaGAAGAGGCCCCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLVASPS*KRPLRV
Trigger: CACTCTCAGGGGCCTCTTTCAGCTGGGGCTGGCAAC...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGGAGCGCCCCAGCTATaGGGTTTGACGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCGAPQL*GLTGAP
Trigger: AGGAGCTCCCGTCAAACCTCATAGCTGGGGCGCTCC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGTGGGTCTGTGGGGGCTaGCCTCAGACCTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWWVCGG*PQTSEA
Trigger: AGCCTCAGAGGTCTGAGGTCAGCCCCCACAGACCCA...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTACAGGGAACGCAGCATaGAGAACACCCGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: KEWTADLWAARPSFEVSLTGNAA*RTPGWP
Trigger: GGGCCATCCGGGTGTTCTTCATGCTGCGTTCCCTGT...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACGGACATCATCAGTCTTaGTCAGGTCCTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHGHHQS*SGPPPE
Trigger: CTCGGGAGGAGGACCTGATCAAGACTGATGATGTCC...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATAGCTGTGCTGGTTTATaGACTGGGCCACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYSCAGL*TGPRRS
Trigger: GCTTCGCCGTGGCCCAGTGCATAAACCAGCACAGCT...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACCTGCCACTCCTGACTaGTGGACTCTGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGPATPD*WTLGCG
Trigger: TCCACAGCCCAGAGTCCAGCAGTCAGGAGTGGCAGG...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR GCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGGGCTGTCTCCACGGCTaGGCTCCTGGCCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWGCLHG*APGHVL
Trigger: AAGAACGTGGCCAGGAGCGCAGCCGTGGAGACAGCC...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGGCTCCCAGTGTGTCTTaGCAGTCAGCGGCACTGGGG +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLAPSVS*QSAALG
Trigger: CCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGC...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTGGGAGGCCTCTCGGCTaGTATAGCAGAAAACCATTC +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSGRPLG*YSRKPF
Trigger: GAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCC...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGCCTGGTGGGCACATCTaGTGGCAGGTCTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEPGGHI*WQVWRK
Trigger: TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGG...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGCCCCTTTCTGAGCTGTaGGTTTTCTCTATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMPLSEL*VFSMEA
Trigger: TGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGG...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGAAGCAACACACAGGCTaGCTGCTGGGTGTGGCGTGT +
Preference number: 4 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRKQHTG*LLGVAC
Trigger: ACACGCCACACCCAGCAGGCAGCCTGTGTGTTGCTT...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAATCGTCCGTGGTGTTCTaGTCCTGCACGGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGLEMSCGKSGRRRPHMESSVVF*SCTEVL
Trigger: CAGCACCTCCGTGCAGGAGCAGAACACCACGGACGA...TTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTGCACTCATCAGGACTTaGTGCTTCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VSGSRAGRVERNILGAVSALIRT*CFRSRQ
Trigger: CTGCCTGCTTCTGAAGCAGCAAGTCCTGATGAGTGC...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGATGCCCGTCAGTGGCGTaGCTGTTGGGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRCPSVA*LLGAAG
Trigger: TCCTGCTGCCCCCAACAGGCACGCCACTGACGGGCA...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGAGACGGGGAGCTGTGCTaGTTTATGCACTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGDGELC*FMHWAT
Trigger: CGTGGCCCAGTGCATAAACCAGCACAGCTCCCCGTC...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGGGTGGAGGACGAGCTaGTGCCTCCAGAGTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCGWRTS*CLQSRS
Trigger: ACTGCGACTCTGGAGGCACCAGCTCGTCCTCCACCC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGACCACGGCTGCGCTCCTaGCCACGTTCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRPRLRS*PRSCWA
Trigger: AGCCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGG...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTCCCGAGACTACCCTATaGCCAGGCTCCGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPPETTL*PGSGGY
Trigger: GTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGG...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGCCACTCCCCCTCCTTaGCAGGACTGTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEATPPP*QDCVSF
Trigger: GAAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGCAGGGATTCTGCAGATaGCCACGGTGGTCGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLQGFCR*PRWSWF
Trigger: AAACCACGACCACCGTGGCCATCTGCAGAATCCCTG...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGCTGCCTGCTGGGTGTaGCGTGTCCCGTCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLAACWV*RVPSPD
Trigger: ATCAGGAGACGGGACACGCCACACCCAGCAGGCAGC...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCATCCTTCAGTGCTCAGTaGTTACAAGACCAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RWLLGAAQNGGCSQCVLPSFSAQ*LQDQLE
Trigger: CTCCAACTGGTCTTGTAACCACTGAGCACTGAAGGA...TGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGGGACTGCCCTTTTCTTaGCCAGGGATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLGLPFS*PGMQGR
Trigger: TCTACCCTGCATCCCTGGCCAAGAAAAGGGCAGTCC...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGTGGCCTCCAATGGGCTaGCTCCCAGACCTCCTTACA +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEWPPMG*LPDLLT
Trigger: TGTAAGGAGGTCTGGGAGCCAGCCCATTGGAGGCCA...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCTGGACTGGCCTGTCTaGGAGCGCCCCAGCTATGAG +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLLDWPV*ERPSYE
Trigger: CTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAG...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTCCAGCGTGTCCTGTCTaGACTGGCCTGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPPACPV*TGLSGS
Trigger: GCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGG...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGCCTTCCCACACTCCTaGCTCTTCCTCTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEAFPHS*LFLWMP
Trigger: TGGCATCCAGAGGAAGAGCCAGGAGTGTGGGAAGGC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATTCAGCCTCTCTGCAGGGACTTaGGGGGCGGGCCGGATGGGT +
Preference number: 4 (lower is better)
Translates to: KSFHDGRPLGCYSRKPFSLSAGT*GAGRMG
Trigger: ACCCATCCGGCCCGCCCCCCAAGTCCCTGCAGAGAG...GCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGATTTTCTCCTCGTCCGTaGTGTTCTGCTCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: GLCFLHEVENCPRQALPGFSPRP*CSAPAR
Trigger: CCGTGCAGGAGCAGAACACCACGGACGAGGAGAAAA...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTCTTCTCGGCCGCATTTaGCACGGGGAGCTGGATTCG +
Preference number: 4 (lower is better)
Translates to: KEWTADLWAARPSFEVSLLLGRI*HGELDS
Trigger: CGAATCCAGCTCCCCGTGCCAAATGCGGCCGAGAAG...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACCCGGATCTTCCCATCTaGCTGGGCAGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHPDLPI*LGSVVH
Trigger: ATGAACAACGCTGCCCAGCCAGATGGGAAGATCCGG...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATACAGCCAGGAATCGCTaGACCATGCCGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNTARNR*TMPPSL
Trigger: CAAGGATGGCGGCATGGTCCAGCGATTCCTGGCTGT...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCAGGTGGCCTGGAGGATaGGGAAGGGCTTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVRWPGG*GRAWNG
Trigger: CCCATTCCAAGCCCTTCCCCATCCTCCAGGCCACCT...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
3UTR CAA 72 bp TCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTaGGGGGCTGTGTCTGATGCATCTGGGTCCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SGSRAGRVERNI*GAVSDASGSLL
Trigger: AAGCAAGGACCCAGATGCATCAGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTAATCCCACGCGATGGTaGAGGCTGGCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKANPTRW*RLALPA
Trigger: GGCAGGAAGGGCCAGCCTTCACCATCGCGTGGGATT...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGTCCTGGTTCTCCAGTaGGTACACGTAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSRVRDELWQKWEETPSYVLVLQ*VHVEGQ
Trigger: CTGCCCCTCTACGTGTACTCACTGGAGAACCAGGAC...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATCAGGCTTGTGGATGGTaGTGTTCAGGGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRVRDELWQKWEETPSYQACGW*CSGHGC
Trigger: ACAGCCGTGCCCTGAACATCACCATCCACAAGCCTG...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGCAGCGGATGTGGTCTaGGAAGATGAAGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVAADVV*EDEGGL
Trigger: CAGGCCACCTTCATCTTCTCAGACCACATCCGCTGC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCAGGGCAGCTATTCTCTaGATCTTCATGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: PSLPGILQMATVVVVCPSRAAIL*IFMRLA
Trigger: GGCAAGGCGCATGAAGATGCAGAGAATAGCTGCCCT...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCTCAGTCCTCAGCGGTaGCCACAGGCTCAGCACATG +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLLSPQR*PQAQHM
Trigger: CATGTGCTGAGCCTGTGGGCACCGCTGAGGACTGAG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGCCGGTGCAGTCATCTaGATTCGCCGCGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRAGAVI*IRRGVS
Trigger: GGAGACACCGCGGCGAATGCAGATGACTGCACCGGC...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGAAAGGTCCTTGTACCTaGAGCCATGAAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLKGPCT*SHEGWV
Trigger: CACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTT...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGCTTCCTTTGGGTTTCTaGCCATGTGGCCCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLLPLGF*PCGPLS
Trigger: AGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAG...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAAACACACAGGCTGCCTaGTGGGTGTGGCGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRNTQAA*WVWRVP
Trigger: CGGGACACGCCACACCCAGCAGGCAGCCTGTGTGTT...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATGGTCCTCCCGGGCATaGTGTCCAGCCCTGACCAAG +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPWSSRA*CPALTK
Trigger: CTTGGTCAGGGCTGGACAGCATGCCCGGGAGGACCA...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTTCGTCCGTGGTGTTCTaGTCCTGCACGGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLSSVVF*SCTEVL
Trigger: CAGCACCTCCGTGCAGGAGCAGAACACCACGGACGA...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCCAGGCAGGCCAGGTaGACGTCCTTCATGATGCAG +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVSRQAR*TSFMMQ
Trigger: CTGCATCATGAAGGACGTGCACCTGGCCTGCCTGGA...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGTGGGCTTCATTGTCATaGTCCTATACTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: HEVENCPRQALPGQLAGPWASLS*SYTHLQ
Trigger: TTGAAGATGAGTATAGGAGCATGACAATGAAGCCCA...CGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGGAGCGCAGGGATAGGTaGTTGAGATGGCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLERRDR*LRWLLG
Trigger: CCCCAGCAGCCATCTCAACCACCTATCCCTGCGCTC...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGGGTGGATCACGGCCTaGGCTGTGAGTGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLGWITA*AVSAVS
Trigger: AGACACAGCACTCACAGCCCAGGCCGTGATCCACCC...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCATCTGGAGGAAAGTTGTaGAAGGTCTCACCAGTGACC +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPSGGKL*KVSPVT
Trigger: GGTCACTGGTGAGACCTTCCACAACTTTCCTCCAGA...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGTGGCCACGGTGGTCGTaGTTTGTCCTTCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEWPRWS*FVLPLG
Trigger: ACCCAAAGGAAGGACAAACCACGACCACCGTGGCCA...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTTTTCCTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAGCTGCCTGCTGGGTGTaGCGTGTCCCGTCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LFLEKSFHDGRPLGCYSRAACWV*RVPSPD
Trigger: ATCAGGAGACGGGACACGCCACACCCAGCAGGCAGC...TCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAGGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACTCACCCCACACACCTaGAGGTGTCCCCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPLTPHT*RCPPDA
Trigger: TGCGTCTGGGGGACACCTCCAGGTGTGTGGGGTGAG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCCCTTTGAAGCCAAAATaGCTGGTGGCCTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: PSLPGILQMATVVVVCPSPLKPK*LVASNG
Trigger: CCCATTGGAGGCCACCAGCCATTTTGGCTTCAAAGG...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGAGCCTTCCCACACTCCTaGCTCTTCCTCTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGAFPHS*LFLWMP
Trigger: TGGCATCCAGAGGAAGAGCCAGGAGTGTGGGAAGGC...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTGGGTGGACCAGGGCCTaGGCCATAACTCTAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSGWTRA*AITLSA
Trigger: AGCACTTAGAGTTATGGCCCAGGCCCTGGTCCACCC...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGACCCTGCTCCCTGACTTaGCAAACCCAGCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRPCSLT*QTQPEV
Trigger: CACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGG...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACCCTGCTCCCTGACTTaGCAAACCCAGCCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPPCSLT*QTQPEV
Trigger: CACCTCCGGCTGGGTTTGCCAAGTCAGGGAGCAGGG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCCACACACCTGGAGGTGTCCCCCAGACGCAAGTTGCCAGCCCCAGCTGAAAGAACCGAATGCTGGGCTTaGCAGAACTTCTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: PTHLEVSPRRKLPAPAERTECWA*QNFSEY
Trigger: ATATTCAGAGAAGTTCTGCCAAGCCCAGCATTCGGT...TCTTTCAGCTGGGGCTGGCAACTTGCGTCTGGGGGACACCTCCAGGTGTGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGCGGGTGGTTGTAGGTaGTCTTCTCGGCCGCATTTG +
Preference number: 4 (lower is better)
Translates to: RSRVRDELWQKWEETPSYAGGCR*SSRPHL
Trigger: CAAATGCGGCCGAGAAGACCACCTACAACCACCCGC...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTACAGTCGAGGGCAGGTaGCGTAGAGGGTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLTVEGR*RRGCLP
Trigger: AGGAAGACACCCTCTACGTCACCTGCCCTCGACTGT...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCATGTGGCCCCCTTTCTaGGCTGTGCGTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSLPGILQMATVVVVCPSMWPPF*AVRFLY
Trigger: ATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACAT...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCATGCTGTCCAGCCCTaGCCAAGACCTCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLHAVQP*PRPLSF
Trigger: GAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATAGACCTCTGAGGCTATaGCCTGAGTGTCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNRPLRL*PECQKP
Trigger: TGGCTTCTGACACTCAGGTCATAGCCTCAGAGGTCT...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATCCCTTAGGTTGCTTGTaGACGCAAGTGTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNPLGCL*TQVSGL
Trigger: CAACCCAGACACTTGCGTTCACAAGCAACCTAAGGG...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTGTCCTGGTTCTCCAGTaGGTACACGTAGAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPVLVLQ*VHVEGQ
Trigger: CTGCCCCTCTACGTGTACTCACTGGAGAACCAGGAC...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGGATCACCATTCAGAATaGCTTCAGCTAACGAGTTCA +
Preference number: 4 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMDHHSE*LQLTSS
Trigger: TGAACTCGTTAGCTGAAGTCATTCTGAATGGTGATC...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATTCTCCCCACTCGTCTTaGTGCCTTTTGAACCACCCT +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNSPHSS*CLLNHP
Trigger: AGGGTGGTTCAAAAGGCATCAAGACGAGTGGGGAGA...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGGTGCACGTCCTTCATaGTGCAGCCAGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVGARPS*CSQHSS
Trigger: TGATGAGTGCTGGCTGCATCATGAAGGACGTGCACC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACCCTCGCAATTGCAGTaGCAGGGAACGCAGCATGAA +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGPSQLQ*QGTQHE
Trigger: TTCATGCTGCGTTCCCTGTCACTGCAATTGCGAGGG...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTGTGGTCTGAGAAGATaGAGGTGGCCTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVCGLRR*RWPGGW
Trigger: CCATCCTCCAGGCCACCTTCATCTTCTCAGACCACA...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACAGCACGGCCTTCTTTTaGAGTCTCACTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHSTAFF*SLTSSG
Trigger: CCCTGAAGAAGTGAGACTTCAAAAGAAGGCCGTGCT...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAATTCTCTGCATCTTCATaGGCCTTGCCTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: AGLEMSCGKSGRRRPHMEFSASS*ALPGCG
Trigger: GCCGCATCCAGGCAAGGCGCATGAAGATGCAGAGAA...TTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RITCPTYKNSWELAESFSLWGRC*PGAPGR
Trigger: ACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAG...GCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp CATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCCTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: HVQHTKIAGNLQSLLAYSLWGRC*PGAPGR
Trigger: ACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAG...GCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATATGCATCTGGGTCCTTaGTTGTACACACCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNMHLGP*LYTPSP
Trigger: CGGACTGGGTGTGTACAAGCAAGGACCCAGATGCAT...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCCTCTTCCAGGGATTCTaGAGATGGCCACGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCLFQGF*RWPRWS
Trigger: CGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAG...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCTCCAGGCAGGCCAGGTaGACGTCCTTCATGATGCAG +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCSRQAR*TSFMMQ
Trigger: CTGCATCATGAAGGACGTGCACCTGGCCTGCCTGGA...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGCGGAGCGCTGCACTGTaGGGTCGCTGCTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AFQRITCPTYKNSWELAERSAAL*GRCCPG
Trigger: GCCGGGGCAGCAGCGACCCCACAGTGCAGCGCTCCG...CTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CCA 90 bp CTTTTCCTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGATGCTGGTTTATGCACTaGGCCACGGCGAAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LFLEKSFHDGRPLGCYSRCWFMH*ATAKPG
Trigger: GCCAGGCTTCGCCGTGGCCCAGTGCATAAACCAGCA...TCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCAGACGGGGAGCTGTGCTaGTTTATGCACTGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPDGELC*FMHWAT
Trigger: CGTGGCCCAGTGCATAAACCAGCACAGCTCCCCGTC...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGAGGGGAACTGGCTCTaGGCCATCTCTCGGCACATG +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSREGNWL*AISRHM
Trigger: CATGTGCCGAGAGATGGCCCAGAGCCAGTTCCCCTC...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATGTGAGTGCTGTGTCTaGCTCCCGAGCTGGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPCECCV*LPSWPS
Trigger: ACTCGGCCAGCTCGGGAGCCAGACACAGCACTCACA...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGACAGGGCAAAGTCATTaGTGTGCTCATTATAAAAGA +
Preference number: 4 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRTGQSH*CAHYKR
Trigger: TCTTTTATAATGAGCACACCAATGACTTTGCCCTGT...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACCGGATCTTCCCATCTaGCTGGGCAGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGPDLPI*LGSVVH
Trigger: ATGAACAACGCTGCCCAGCCAGATGGGAAGATCCGG...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATCTGGACGCAGGCTTGTaGATGGTGATGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RSRVRDELWQKWEETPSYLDAGL*MVMFRA
Trigger: TGCCCTGAACATCACCATCCACAAGCCTGCGTCCAG...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAAGGTGGCCTGGAGGATaGGGAAGGGCTTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVRWPGG*GRAWNG
Trigger: CCCATTCCAAGCCCTTCCCCATCCTCCAGGCCACCT...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp AGGAGCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATTGGACAGCTGACCTGTaGGCAGCACGGCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RSRVRDELWQKWEETPSYWTADL*AARPSF
Trigger: AAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCA...ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGGAGACGCCCTCATATaGAAGGAGTGGACAGCTGAC +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVGDALI*KEWTAD
Trigger: GTCAGCTGTCCACTCCTTCCATATGAGGGCGTCTCC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGGGAGAAATCTTTCCATaGTGGGAGGCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWGEIFP*WEASRL
Trigger: CAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCC...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATATGTGGCCCCCTTTCTaGGCTGTGCGTTTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYMWPPF*AVRFLY
Trigger: ATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACAT...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTCACATGGCTCCCAATaGACCAGACCAAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHSHGSQ*TRPNWR
Trigger: TCTCCAATTTGGTCTGGTTCATTGGGAGCCATGTGA...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACACCATGCCCTTGCAGCTGGTTCACCAGCGGTGCATaGTGTATAATTAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: QRESDRLRALGTPCPCSWFTSGA*CIIKKT
Trigger: GGTCTTCTTAATTATACATCATGCACCGCTGGTGAA...CCAGCTGCAAGGGCATGGTGTCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGTGGAGGCGTCCATCATaGGATATTCCACGTTCATGG +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEWRRPS*DIPRSW
Trigger: CCATGAACGTGGAATATCTCATGATGGACGCCTCCA...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp AAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATTCAGCACAGGGAACGCAGCATaGAGAACACCCGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: KSFHDGRPLGCYSRKPFSTGNAA*RTPGWP
Trigger: GGGCCATCCGGGTGTTCTTCATGCTGCGTTCCCTGT...GCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTACAGGCTTGTGGATGGTaGTGTTCAGGGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVQACGW*CSGHGC
Trigger: ACAGCCGTGCCCTGAACATCACCATCCACAAGCCTG...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTAGGGCAGCTATTCTCTaGATCTTCATGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSRAAIL*IFMRLA
Trigger: GGCAAGGCGCATGAAGATGCAGAGAATAGCTGCCCT...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAAGGGCAGCTATTCTCTaGATCTTCATGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AGLEMSCGKSGRRRPHMERAAIL*IFMRLA
Trigger: GGCAAGGCGCATGAAGATGCAGAGAATAGCTGCCCT...TTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp ATCAATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTCTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: INDSNKPAHKYLKAGFGFLWGRC*PGAPGR
Trigger: ACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAG...AAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR GCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAAGCTGTGCTGGTTTATaGACTGGGCCACGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVSCAGL*TGPRRS
Trigger: GCTTCGCCGTGGCCCAGTGCATAAACCAGCACAGCT...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATTCAGCAGGGACGGGGAGCTGTaGTGGTTTATGCACTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSFHDGRPLGCYSRKPFSRDGEL*WFMHWA
Trigger: GGCCCAGTGCATAAACCAGCACAGCTCCCCGTCCCT...GCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTACATGAGGTTGAAAACTaGCCTCGGCAGGCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVHEVEN*PRQALP
Trigger: CGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATG...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCCTGGGACAGGTACCTTaGACGTCCAGAAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCLGQVP*TSRKGR
Trigger: TCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTGTTGCGGGAAGTCTTaGCATGGCCCCCGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSCCGKS*HGPRPP
Trigger: GGGTGGGCGGGGGCCATGGCAAGACTTCCCGCAACA...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTCGCTGGGGCTCCCGCTaGCGGAGGGTGGCGACTGTG +
Preference number: 4 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSRWGSR*RRVATV
Trigger: CACAGTCGCCACCCTCCGCCAGCGGGAGCCCCAGCG...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCTGGGGAAGGGAACCATaGGGTTTCCATATTCAGATC +
Preference number: 4 (lower is better)
Translates to: PSLPGILQMATVVVVCPSWGREP*GFHIQI
Trigger: GATCTGAATATGGAAACCCCATGGTTCCCTTCCCCA...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACACACCCAGTCCGAATaGGGAAGGGAACCATGGGGT +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPHTQSE*GREPWG
Trigger: ACCCCATGGTTCCCTTCCCCATTCGGACTGGGTGTG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGGGACTGCCCTTTTCTTaGCCAGGGATGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWGLPFS*PGMQGR
Trigger: TCTACCCTGCATCCCTGGCCAAGAAAAGGGCAGTCC...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTTTTCCTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAGCCAAAATGGCTGGTaGCCTCCAATGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LFLEKSFHDGRPLGCYSRSQNGW*PPMGWL
Trigger: GAGCCAGCCCATTGGAGGCCACCAGCCATTTTGGCT...TCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAGGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAACCCTCGGTTCTCACTaGGACAAAAATTATTTACAT +
Preference number: 4 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVATLGSH*DKNYLH
Trigger: ATGTAAATAATTTTTGTCCCAGTGAGAACCGAGGGT...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGCGGGAAGTCTTGCCATaGCCCCCGCCCACCCAGCTC +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRREVLP*PPPTQL
Trigger: GAGCTGGGTGGGCGGGGGCCATGGCAAGACTTCCCG...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGAAGGTGGTCCAAGGAGTaGATGTTGCGGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGRWSKE*MLREVL
Trigger: CAAGACTTCCCGCAACATCCACTCCTTGGACCACCT...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCATACAGATACTTGAGGTaGTCCAAGGAGTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPYRYLR*SKEWML
Trigger: CAACATCCACTCCTTGGACCACCTCAAGTATCTGTA...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAAAGAAATGGACAGTGTaGTTGTTGAGTTTTAACGAA +
Preference number: 4 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAKKWTV*LLSFNE
Trigger: TTCGTTAAAACTCAACAACCACACTGTCCATTTCTT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGGACAGGTACCTTGCACGTCCAGAAAGGGACGAGCACACCTCCACAACAATATCTTCCCATCTGGCTaGGCAGCGTTGTTCATGATC +
Preference number: 4 (lower is better)
Translates to: LGQVPCTSRKGRAHLHNNIFPSG*AALFMI
Trigger: GATCATGAACAACGCTGCCCAGCCAGATGGGAAGAT...ATTGTTGTGGAGGTGTGCTCGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTGGGGGCTGGCTCACCTaGCACCTTGTCCACCGATGC +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSGGWLT*HLVHRC
Trigger: GCATCGGTGGACAAGGTGCCAGGTGAGCCAGCCCCC...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTTGTGGTCTGAGAAGATaGAGGTGGCCTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKACGLRR*RWPGGW
Trigger: CCATCCTCCAGGCCACCTTCATCTTCTCAGACCACA...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGCACAGAATGGTGGGTaGTCCCAGTGTGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKAAQNGG*SQCVLP
Trigger: TGGCAAGACACACTGGGAGCACCCACCATTCTGTGC...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGGACGAGCACACCTCCACAACAATATTCAAAGCCAAGGTTTGGGAGTTCCTGCGGGAGGCCTCTCGGCTaGTATAGCAGAAAACCATTC +
Preference number: 4 (lower is better)
Translates to: GTSTPPQQYSKPRFGSSCGRPLG*YSRKPF
Trigger: GAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCC...GCAGGAACTCCCAAACCTTGGCTTTGAATATTGTTGTGGAGGTGTGCTCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCCATGTTCTTCTAAAATaGAGGTGGCAAAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLHVLLK*RWQKIS
Trigger: TGAGATCTTTTGCCACCTGCATTTTAGAAGAACATG...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGGCCATAACTCTAAGTaGTCTCTGCAGGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLGHNSK*SLQGLG
Trigger: CCCAAGTCCCTGCAGAGAGCACTTAGAGTTATGGCC...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGCGTCTCACGGTCTCATaGCGGACCAGCAGAGCGGCC +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRRLTVS*RTSRAA
Trigger: GGCCGCTCTGCTGGTCCGGCATGAGACCGTGAGACG...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTTGCTCCTCATCAGTCTaGACGCAGTCATCGAGTTCG +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPCSSSV*TQSSSS
Trigger: CGAACTCGATGACTGCGTGCAGACTGATGAGGAGCA...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTTTGCACCCGCCTCTTaGCCTTGTGCTTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVFAPAS*PCACSS
Trigger: AGATGAACAAGCACAAGGGCAAGAGGCGGGTGCAAA...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATCTTCTAAAATGCAGGTaGCAAAAGATCTCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLAPRPPYISKASGSPGYLLKCR*QKISAR
Trigger: CCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAG...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACCTTTAATCCTCTGCTaGTCCTCCCGGGCATGCTGT +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPPLILC*SSRACC
Trigger: ACAGCATGCCCGGGAGGACCAGCAGAGGATTAAAGG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCCTTTGAAGCCAAAATaGCTGGTGGCCTCCAATGGG +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLPLKPK*LVASNG
Trigger: CCCATTGGAGGCCACCAGCCATTTTGGCTTCAAAGG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGAGACCTGGGTGAGGTaGGGTCCTTTGAAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLETWVR*GPLKPK
Trigger: TTTTGGCTTCAAAGGACCCCACCTCACCCAGGTCTC...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTACAGATACTTGAGGTaGTCCAAGGAGTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHYRYLR*SKEWML
Trigger: CAACATCCACTCCTTGGACCACCTCAAGTATCTGTA...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGATCGAGTTCGATCACATaGCTCCCAATGAACCAGACC +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGSSSIT*LPMNQT
Trigger: GGTCTGGTTCATTGGGAGCCATGTGATCGAACTCGA...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACACCGAATGCTGGGCTTaGCAGAACTTCTCTGAATAT +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHTECWA*QNFSEY
Trigger: ATATTCAGAGAAGTTCTGCCAAGCCCAGCATTCGGT...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTATCTTCCCATCTGGCTaGGCAGCGTTGTTCATGATC +
Preference number: 4 (lower is better)
Translates to: KEWTADLWAARPSFEVSLIFPSG*AALFMI
Trigger: GATCATGAACAACGCTGCCCAGCCAGATGGGAAGAT...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTGGATGGGGAAGGGCTTaGAATGGGGGCTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSGWGRA*NGGWTQ
Trigger: CTGCGTCCAGCCCCCATTCCAAGCCCTTCCCCATCC...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGAGAACTCGGTCTTCTaGAGAAGTGGTCCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVENSVF*RSGPFH
Trigger: GTGGAAAGGACCACTTCTCCAGAAGACCGAGTTCTC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTACCCAGTGGCCGCCATaGCTGTCGGCCTCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSTQWPP*LSASDR
Trigger: CCTGTCGGAGGCCGACAGTCATGGCGGCCACTGGGT...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR TCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTTTTGGTGAAGAGAAATaGGGAAGCGTCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPFGEEK*GSVLSG
Trigger: CCCACTCAGGACGCTTCCTCATTTCTCTTCACCAAA...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACCCTTAGGTTGCTTGTaGACGCAAGTGTCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPPLGCL*TQVSGL
Trigger: CAACCCAGACACTTGCGTTCACAAGCAACCTAAGGG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTTTTCCTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGACGTGGTACAGATACTTaGGGTGGTCCAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LFLEKSFHDGRPLGCYSRRGTDT*GGPRSG
Trigger: TCCACTCCTTGGACCACCTCAAGTATCTGTACCACG...TCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCCGGTTCTGTTCTGTaGCTGTGGTGTTTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVSGSVL*LWCFWS
Trigger: TGACCAAAAACACCACAGTCACAGAACAGAACCGGA...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGATCCGGTTCTGTTCTGTaGCTGTGGTGTTTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IQISSSSRGRVTDSELWGSGSVL*LWCFWS
Trigger: TGACCAAAAACACCACAGTCACAGAACAGAACCGGA...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGTCCAATTCTTCTGTaGACACTGGGGCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKAGPILL*TLGLVT
Trigger: TGTCACCAGCCCCAGTGTGCACAGAAGAATTGGACC...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTTGCCCGTCAGTGGCGTaGCTGTTGGGGGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFCPSVA*LLGAAG
Trigger: TCCTGCTGCCCCCAACAGGCACGCCACTGACGGGCA...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTGGCTCCCCTCGCAATTaGAGTGACAGGGAACGCAGC +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSGSPRN*SDRERS
Trigger: GCTGCGTTCCCTGTCACTGCAATTGCGAGGGGAGCC...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTGCGCCTTGCCTGGATaGGGCCTTTGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: HVQHTKIAGNLQSLLAYSCALPG*GLWPGA
Trigger: AGCGCCTGGCCAAAGGCCGCATCCAGGCAAGGCGCA...GCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp TTTCTGATTGCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACGGAGCGCTGCACTGTaGGGTCGCTGCTGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FLIAFQRITCPTYKNSWERSAAL*GRCCPG
Trigger: GCCGGGGCAGCAGCGACCCCACAGTGCAGCGCTCCG...TTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGCAATCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTTGGGGAAGGGAACCATaGGGTTTCCATATTCAGATC +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSWGREP*GFHIQI
Trigger: GATCTGAATATGGAAACCCCATGGTTCCCTTCCCCA...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTTCTAAAATGCAGGTaGCAAAAGATCTCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSLLKCR*QKISAR
Trigger: CCGCGCTGAGATCTTTTGCCACCTGCATTTTAGAAG...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGGTTTGTCCTTCCTTTaGGTTTCTGCCCATGTGGCC +
Preference number: 4 (lower is better)
Translates to: EWGREPWGFHIQISSSSRGLSFL*VSAHVA
Trigger: GGCCACATGGGCAGAAACCCAAAGGAAGGACAAACC...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTGGAGAGGGACTGGGCTaGGACAGCGGCAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSGEGLG*DSGRGG
Trigger: CCCTCCTCTGCCGCTGTCCCAGCCCAGTCCCTCTCC...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACAACGTTTTTGTAGTTaGGTCTCTTTTGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGQRFCS*VSFAPA
Trigger: GGCGGGTGCAAAAGAGACCCAACTACAAAAACGTTG...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGATATTCCACGTTCATaGGCTTCATTGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEDIPRS*ASLSCS
Trigger: GGAGCATGACAATGAAGCCCATGAACGTGGAATATC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAATGATGCAGCGGATGTaGTCTGAGAAGATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: AGLEMSCGKSGRRRPHMEMMQRM*SEKMKV
Trigger: CACCTTCATCTTCTCAGACCACATCCGCTGCATCAT...TTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCCCTGGATGCGGCCTTTaGCCAGGCGCTGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: HVQHTKIAGNLQSLLAYSPGCGL*PGAAWR
Trigger: TCGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGG...GCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR TCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTATTTGGTGAAGAGAAATaGGGAAGCGTCCTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVFGEEK*GSVLSG
Trigger: CCCACTCAGGACGCTTCCTCATTTCTCTTCACCAAA...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp AAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATTCAGCAGTACCCACGAAGCATaGGTCATGCTGGCGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KSFHDGRPLGCYSRKPFSSTHEA*VMLAKA
Trigger: TGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACT...GCTGAATGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp TCAGAGACCTTAGAGGAATCTAGCGCGTCTGGCAGGGCTGCGCTTCTTCACCTGTTGGCAGAACTTCTCTaGATATCCTGTTCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SETLEESSASGRAALLHLLAELL*ISCSVL
Trigger: TAAGACTGAACAGGATATTCAGAGAAGTTCTGCCAA...CAGGTGAAGAAGCGCAGCCCTGCCAGACGCGCTAGATTCCTCTAAGGTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTGCTGGCGGCCAGCTCTaGGAGCTTGCTACGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTAGGQL*ELATLH
Trigger: ATGGAGCGTAGCAAGCTCTCAGAGCTGGCCGCCAGC...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGAAGGAGTGGACAGCTaGCCTGTGGGCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHEGVDS*PVGSTA
Trigger: GGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTCACCTTGTCCACCGATaGAAACACGGAGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSHLVHR*KHGALH
Trigger: GTGCAGCGCTCCGTGTTTGCATCGGTGGACAAGGTG...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTGGCTCTTCCTCTGGATaGCAGGGGCCCAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSGSSSG*QGPSVS
Trigger: GGACACGCTGGGCCCCTGGCATCCAGAGGAAGAGCC...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTGGGCTTCATTGTCATaGTCCTATACTCATCTTCAA +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHWASLS*SYTHLQ
Trigger: TTGAAGATGAGTATAGGAGCATGACAATGAAGCCCA...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTGCTTCACGAAGTCAATaGCCGTCAGTGGCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSASRSQ*PSVACL
Trigger: CAGGCACGCCACTGACGGGCATTGACTTCGTGAAGC...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTCCTTTGGCCAGGCGCTaGTTGGCGATGATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTPLARR*LAMMQR
Trigger: CCGCTGCATCATCGCCAAGCAGCGCCTGGCCAAAGG...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCAGCGGCCATCTGGGCTaGCTCTCTACTGCGGCAGTC +
Preference number: 4 (lower is better)
Translates to: RITCPTYKNSWELAESFSSGHLG*LSTAAV
Trigger: GACTGCCGCAGTAGAGAGGCAGCCCAGATGGCCGCT...GCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS-3UTR CCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCTACGTACAGTGACCTaGTCCAATTCTTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLLRTVT*SNSSVH
Trigger: GTGCACAGAAGAATTGGACCAGGTCACTGTACGTAG...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAATCTGCTGGCAGGTCTaGAGGAAAGTTGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVICWQV*RKVVEG
Trigger: ACCTTCCACAACTTTCCTCCAGACCTGCCAGCAGAT...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTATCGAGTTCGATCACATaGCTCCCAATGAACCAGACC +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVSSSIT*LPMNQT
Trigger: GGTCTGGTTCATTGGGAGCCATGTGATCGAACTCGA...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGATTTGGCACGGGGAGCTaGATTCGCTCTAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGFGTGS*IRSNFS
Trigger: TGAAAAATTAGAGCGAATCCAGCTCCCCGTGCCAAA...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATCAGTGGCGTGCCTGTTaGGGGCAGCAGGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHQWRAC*GQQDGG
Trigger: GCCTCCATCCTGCTGCCCCCAACAGGCACGCCACTG...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTGTCAATGCCCGTCAGTaGCGTGCCTGTTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFVNARQ*RACWGQ
Trigger: CTGCCCCCAACAGGCACGCCACTGACGGGCATTGAC...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGGGATGGGGAAGGGCTTaGAATGGGGGCTGGACGCAG +
Preference number: 4 (lower is better)
Translates to: AFQRITCPTYKNSWELAEGWGRA*NGGWTQ
Trigger: CTGCGTCCAGCCCCCATTCCAAGCCCTTCCCCATCC...CTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR TCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAAGGGCTTCTAAGGACTaGGGCCTGTCCCCATGGGCG +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSRASKD*GLSPWA
Trigger: CGCCCATGGGGACAGGCCTCAGTCCTTAGAAGCCCT...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAGTTGCCAGCCCCAGCTaGAAGAGGCCCCTGAGAGTG +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSVASPS*KRPLRV
Trigger: CACTCTCAGGGGCCTCTTTCAGCTGGGGCTGGCAAC...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGTGAGGTCTCGTGACTaGTGTTCTCAAAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKAVRSRD*CSQRGC
Trigger: ACATCCTCTTTGAGAACATCAGTCACGAGACCTCAC...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGATTCACCAGCGGTGCATaGTGTATAATTAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGFTSGA*CIIKKT
Trigger: GGTCTTCTTAATTATACATCATGCACCGCTGGTGAA...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGGCGCTGCTTGGCGATaGTGCAGCGGATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHGAAWR*CSGCGL
Trigger: CAGACCACATCCGCTGCATCATCGCCAAGCAGCGCC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACATTCTTAGTCAATTCTaGGAAGTTCTTCCACATACC +
Preference number: 4 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHILSQF*EVLPHT
Trigger: GGTATGTGGAAGAACTTCTCAGAATTGACTAAGAAT...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp TTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTGCAAACACGGAGCGCTaGACTGTGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FQRITCPTYKNSWELAESANTER*TVGSLL
Trigger: CAGCAGCGACCCCACAGTGCAGCGCTCCGTGTTTGC...AGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp ATCAATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTGCAAACACGGAGCGCTaGACTGTGGGGTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: INDSNKPAHKYLKAGFGFANTER*TVGSLL
Trigger: CAGCAGCGACCCCACAGTGCAGCGCTCCGTGTTTGC...AAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR GCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACCCCTTTCTGAGCTGTaGGTTTTCTCTATGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPPLSEL*VFSMEA
Trigger: TGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATTTCAAAACCAGAAGTaGATGTCTCAGGGGCTAGCC +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPFQNQK*MSQGLA
Trigger: GGCTAGCCCCTGAGACATGCACTTCTGGTTTTGAAA...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAAGGTTTGGGAGTTCCTaGGGCCAGCCCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSRFGSS*GQPCSL
Trigger: CAGGGAGCAGGGCTGGCCGCAGGAACTCCCAAACCT...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTGTCTGCTCCATTGCGTaGTCTCAGAGCAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTVCSIA*SQSRWR
Trigger: CCGCCACCTGCTCTGAGAGCACGCAATGGAGCAGAC...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp AAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCATGGATCCTTTGGCCAGGCGCTaGTTGGCGATGATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: KIAGNLQSLLAYSSLSMDPLARR*LAMMQR
Trigger: CCGCTGCATCATCGCCAAGCAGCGCCTGGCCAAAGG...ATCCATGGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR GCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTCTAAGAAGCTGGTGCTaGCAGCCGACGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTLRSWC*QPTGLL
Trigger: CAGAAGCCCCGTCGGCTGGCAGCACCAGCTTCTTAG...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCCACGGCTGCGCTCCTaGCCACGTTCTTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNPRLRS*PRSCWA
Trigger: AGCCCAGCAAGAACGTGGCCAGGAGCGCAGCCGTGG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGAATTCAAGGACAACGTaGGGCTTCTTCCCATTCAAG +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLNSRTT*GFFPFK
Trigger: CTTGAATGGGAAGAAGCCCCACGTTGTCCTTGAATT...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTCTTCACGGTCCCAACTaGTTCCTTCTTAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKALHGPN*FLLRDG
Trigger: ACCATCTCTAAGAAGGAACCAGTTGGGACCGTGAAG...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGAACCATGCTTTCAGGGTaGTTGAAAAACTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGTMLSG*LKNLMA
Trigger: AGCCATCAAGTTTTTCAACCACCCTGAAAGCATGGT...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGTTTGGCACGGGGAGCTaGATTCGCTCTAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLFGTGS*IRSNFS
Trigger: TGAAAAATTAGAGCGAATCCAGCTCCCCGTGCCAAA...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTCCCCAGCCAAGCCTaGACACATCAGGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFLPSQA*THQAPP
Trigger: TGGTGGAGCCTGATGTGTCCAGGCTTGGCTGGGGAG...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCATGGGGAAGGGCTTGGAATaGGGGCTGGACGCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TKIAGNLQSLLAYSSLSMGKGLE*GLDAGL
Trigger: CAAGCCTGCGTCCAGCCCCCATTCCAAGCCCTTCCC...CATGGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp CGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCTTCATGCGCCTTGCCTaGATGCGGCCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RITCPTYKNSWELAESFSFMRLA*MRPLAR
Trigger: CCTGGCCAAAGGCCGCATCCAGGCAAGGCGCATGAA...GCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp TTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTGGCAGTCAGCAGGGCTaGCACCTTGTCCACCGATGC +
Preference number: 4 (lower is better)
Translates to: FQRITCPTYKNSWELAESGSQQG*HLVHRC
Trigger: GCATCGGTGGACAAGGTGCCAGCCCTGCTGACTGCC...AGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS-3UTR CCA 90 bp CATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCTTGGGAGCGGCCATCTaGGCTGCCTCTCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: HTKIAGNLQSLLAYSSLSLGAAI*AASLLR
Trigger: CCGCAGTAGAGAGGCAGCCCAGATGGCCGCTCCCAA...GGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS-3UTR TCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCATTGTACCTGCAGCCATaGAGGCTGGGTGGGCACAGC +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSLYLQP*RLGGHS
Trigger: GCTGTGCCCACCCAGCCTTCATGGCTGCAGGTACAA...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp GCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACAGTGTGGTTGTTaGGTTTTAACGAAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AGLEMSCGKSGRRRPHMEGQCGC*VLTKVF
Trigger: AAACACTTTCGTTAAAACTCAACAACCACACTGTCC...TTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GCAGGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAATTGGCAGAACTTCTCTaGATATCCTGTTCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: AGLEMSCGKSGRRRPHMELAELL*ISCSVL
Trigger: TAAGACTGAACAGGATATTCAGAGAAGTTCTGCCAA...TTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTAAATGTCGTACAAGGTaGACACTTTCTTCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLKCRTR*TLSSLA
Trigger: TGCGAGAGAAGAAAGTGTTCACCTTGTACGACATTT...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCACAGGCTCAGCACATaGAGCCTCTTCGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNHRLST*SLFAHG
Trigger: CCCGTGGGCGAAGAGGCTGCATGTGCTGAGCCTGTG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCACTCAGTCCTCAGCGGTaGCCACAGGCTCAGCACATG +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSLSPQR*PQAQHM
Trigger: CATGTGCTGAGCCTGTGGGCACCGCTGAGGACTGAG...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTGCTCCTCATCAGTCTaGACGCAGTCATCGAGTTCG +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSCSSSV*TQSSSS
Trigger: CGAACTCGATGACTGCGTGCAGACTGATGAGGAGCA...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGAGGTGATCACTGTACATaGAATCAAGTCGCTGTTATT +
Preference number: 4 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGGDHCT*NQVAVI
Trigger: AATAACAGCGACTTGATTGCATGTACAGTGATCACC...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTTGCGCCTTGCCTGGATaGGGCCTTTGGCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVCALPG*GLWPGA
Trigger: AGCGCCTGGCCAAAGGCCGCATCCAGGCAAGGCGCA...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCATCTTCATGCGCCTTaGCTGGATGCGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFHLHAP*LDAAFG
Trigger: GCCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATG...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCCATCTTCATGCGCCTTaGCTGGATGCGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HVQHTKIAGNLQSLLAYSHLHAP*LDAAFG
Trigger: GCCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATG...GCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCAAGGCAGCTCCCTGAGTaGCCGGTGCAGTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSRQLPE*PVQSSA
Trigger: TGCAGATGACTGCACCGGCCACTCAGGGAGCTGCCT...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCCATGCCCTTGCAGCTaGAGGGGAACTGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNPCPCS*RGTGSG
Trigger: CCCAGAGCCAGTTCCCCTCCAGCTGCAAGGGCATGG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTTGTGCGTTTTCTCTATaGAAGCAAAGGTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLCAFSL*KQRSLY
Trigger: GTACAAGGACCTTTGCTTCCATAGAGAAAACGCACA...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGCTTGGGCATCCTCGGTaGGCCCTTTCTCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRLGHPR*ALSPHL
Trigger: AAGATGAGGAGAAAGGGCCCACCGAGGATGCCCAAG...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGTTTTCTCCTCGTCCGTaGTGTTCTGCTCCTGCACGG +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRFSPRP*CSAPAR
Trigger: CCGTGCAGGAGCAGAACACCACGGACGAGGAGAAAA...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGGGACAGTGTGGTTGTTaGGTTTTAACGAAAGTGTTT +
Preference number: 4 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLGQCGC*VLTKVF
Trigger: AAACACTTTCGTTAAAACTCAACAACCACACTGTCC...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp CATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCGCAGCGGATGTGGTCTaGGAAGATGAAGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HTKIAGNLQSLLAYSSLSAADVV*EDEGGL
Trigger: CAGGCCACCTTCATCTTCTCAGACCACATCCGCTGC...GGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR TCA 90 bp TTTCTGATTGCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAAGGCGCTGCTTGGCGATaGTGCAGCGGATGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLIAFQRITCPTYKNSWEGAAWR*CSGCGL
Trigger: CAGACCACATCCGCTGCATCATCGCCAAGCAGCGCC...TTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGCAATCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR GCA 90 bp CATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTTCTCTGCATCTTCATaGGCCTTGCCTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: HVQHTKIAGNLQSLLAYSFSASS*ALPGCG
Trigger: GCCGCATCCAGGCAAGGCGCATGAAGATGCAGAGAA...GCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp TTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTCACCTTGTCCACCGATaGAAACACGGAGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FQRITCPTYKNSWELAESHLVHR*KHGALH
Trigger: GTGCAGCGCTCCGTGTTTGCATCGGTGGACAAGGTG...AGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCCAAGGAGTGGATGTTaGGGGAAGTCTTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFPRSGC*GKSCHG
Trigger: GCCATGGCAAGACTTCCCGCAACATCCACTCCTTGG...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAAGGGTCTGCTCCATTaGGTGCTCTCAGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTKGLLH*VLSEQV
Trigger: CACCTGCTCTGAGAGCACGCAATGGAGCAGACCCTT...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGGCACTCATCAGGACTTaGTGCTTCAGAAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRALIRT*CFRSRQ
Trigger: CTGCCTGCTTCTGAAGCAGCAAGTCCTGATGAGTGC...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTTCCACGCCAGTCACCTaGATGTCCTGCAATAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTSTPVT*MSCNRP
Trigger: AGGCCTATTGCAGGACATGCAGGTGACTGGCGTGGA...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTATTCTAAGAAGCTGGTaGTGCCAGCCGACGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFILRSW*CQPTGL
Trigger: AAGCCCCGTCGGCTGGCAGCACCAGCTTCTTAGAAT...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCATGTGCGTTTTCTCTATaGAAGCAAAGGTCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPCAFSL*KQRSLY
Trigger: GTACAAGGACCTTTGCTTCCATAGAGAAAACGCACA...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTACAGGGCAAAGTCATTaGTGTGCTCATTATAAAAGA +
Preference number: 4 (lower is better)
Translates to: KEWTADLWAARPSFEVSLTGQSH*CAHYKR
Trigger: TCTTTTATAATGAGCACACCAATGACTTTGCCCTGT...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGGGCTGTCCAGCGCGTaGTACACCATATCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHGLSSA*YTISRK
Trigger: CTTCCTGGATATGGTGTACCACGCGCTGGACAGCCC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATACAGCCAGGAATCGCTaGACCATGCCGCCATCCTTG +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHTARNR*TMPPSL
Trigger: CAAGGATGGCGGCATGGTCCAGCGATTCCTGGCTGT...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTAAGGTGGCCTGGAGGATaGGGAAGGGCTTGGAATGGG +
Preference number: 4 (lower is better)
Translates to: ITCPTYKNSWELAESFSLRWPGG*GRAWNG
Trigger: CCCATTCCAAGCCCTTCCCCATCCTCCAGGCCACCT...TAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTACCCAACAAATCTCTaGAAAACCAAACCAAACACT +
Preference number: 4 (lower is better)
Translates to: IWKEWTADLWAARPSFEVYPTNL*KTKPNT
Trigger: AGTGTTTGGTTTGGTTTTCCAGAGATTTGTTGGGTA...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTCTGACAAATCAGCAATaGACTTTCCATTCAAGTTTC +
Preference number: 4 (lower is better)
Translates to: KEWTADLWAARPSFEVSLLTNQQ*TFHSSF
Trigger: GAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAG...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ATCAATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTGCACAGAGAAGGGTCTaGCACCTTGTCCACCGATGC +
Preference number: 4 (lower is better)
Translates to: INDSNKPAHKYLKAGFGFAQRRV*HLVHRC
Trigger: GCATCGGTGGACAAGGTGCCAGACCCTTCTCTGTGC...AAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR TCA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGAGCAAATAATAAAGTaGGGTCTCGTGACTGATGTT +
Preference number: 4 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKAEQIIK*GLVTDV
Trigger: AACATCAGTCACGAGACCTCACTTTATTATTTGCTC...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGGCTTGCTACGCTCCATaGTCACCATCTCGATCTCTT +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRACYAP*SPSRSL
Trigger: AAGAGATCGAGATGGTGATCATGGAGCGTAGCAAGC...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGTGGAGGCGTCCATCATaGGATATTCCACGTTCATGG +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRWRRPS*DIPRSW
Trigger: CCATGAACGTGGAATATCTCATGATGGACGCCTCCA...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGTGCCGCCATCCTTGGTaGTCACTGTACATGCAATCA +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRCRHPW*SLYMQS
Trigger: TGATTGCATGTACAGTGATCACCAAGGATGGCGGCA...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTACAGGCTTGTGGATGGTaGTGTTCAGGGCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: QHTKIAGNLQSLLAYSSLQACGW*CSGHGC
Trigger: ACAGCCGTGCCCTGAACATCACCATCCACAAGCCTG...TAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR TCA 90 bp AAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCATGGATTGTGGTCTGAGAAGATaGAGGTGGCCTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: KIAGNLQSLLAYSSLSMDCGLRR*RWPGGW
Trigger: CCATCCTCCAGGCCACCTTCATCTTCTCAGACCACA...ATCCATGGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR TCA 90 bp TGTCAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGAGCTCTGGCACATGTATaGAATGCAACTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: CQLGREQLKPNTEFLQKRALAHV*NATAQR
Trigger: TCTCTGTGCAGTTGCATTTCATACATGTGCCAGAGC...TCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR GCA 90 bp GCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGAGGGCAGCTATTCTCTaGATCTTCATGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: AFQRITCPTYKNSWELAERAAIL*IFMRLA
Trigger: GGCAAGGCGCATGAAGATGCAGAGAATAGCTGCCCT...CTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp CTGATTGCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTCACCTTGTCCACCGATaGAAACACGGAGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LIAFQRITCPTYKNSWELHLVHR*KHGALH
Trigger: GTGCAGCGCTCCGTGTTTGCATCGGTGGACAAGGTG...AAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGCAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp AAACGAAAACATAAACTCACAATTACTGGCATCAATGACTCTAATAAACCCGCCCACCTTGTCCACCGATaGAAACACGGAGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KRKHKLTITGINDSNKPAHLVHR*KHGALH
Trigger: GTGCAGCGCTCCGTGTTTGCATCGGTGGACAAGGTG...GGCGGGTTTATTAGAGTCATTGATGCCAGTAATTGTGAGTTTATGTTTTCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR GCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCCTGGTGGGCACATCTaGTGGCAGGTCTGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNPGGHI*WQVWRK
Trigger: TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp CTCTCGGCTGCTATAGCAGAAAACCATTCAGCCCTCTCAGCTCTGTGTGTACCTCATGTTCTTCTAAAATaGAGGTGGCAAAAGATCTCA +
Preference number: 4 (lower is better)
Translates to: LSAAIAENHSALSALCVPHVLLK*RWQKIS
Trigger: TGAGATCTTTTGCCACCTGCATTTTAGAAGAACATG...AGGTACACACAGAGCTGAGAGGGCTGAATGGTTTTCTGCTATAGCAGCCGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR GCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCGCCTCTTGCCCTTGTaGTTGTTCATCTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFRLLPL*LFISRD
Trigger: GTCCCTTGAGATGAACAAGCACAAGGGCAAGAGGCG...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTCATCAGGACTTGCTaGTTCAGAAGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFLIRTC*FRSRQL
Trigger: GAGCTGCCTGCTTCTGAAGCAGCAAGTCCTGATGAG...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCATCTTCATGCGCCTTaGCTGGATGCGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNHLHAP*LDAAFG
Trigger: GCCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp CTGATTGCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTCATCTTCATGCGCCTTaGCTGGATGCGGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LIAFQRITCPTYKNSWELHLHAP*LDAAFG
Trigger: GCCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATG...AAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGCAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATAGCCAAAATGGCTGGTaGCCTCCAATGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNSQNGW*PPMGWL
Trigger: GAGCCAGCCCATTGGAGGCCACCAGCCATTTTGGCT...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTAGCCTGTTGAGCAGGTaGTCAGTGAGCACATCGTTG +
Preference number: 4 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFSLLSR*SVSTSL
Trigger: CAACGATGTGCTCACTGACCACCTGCTCAACAGGCT...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATCAAATTCTAAGAAGCTaGTGCTGCCAGCCGACGGGG +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHQILRS*CCQPTG
Trigger: CCCCGTCGGCTGGCAGCACCAGCTTCTTAGAATTTG...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATGGAGAAATCTTTCCATaGTGGGAGGCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNGEIFP*WEASRL
Trigger: CAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCC...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR TCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATCGTGGTACAGATACTTaGGGTGGTCCAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHRGTDT*GGPRSG
Trigger: TCCACTCCTTGGACCACCTCAAGTATCTGTACCACG...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGAAAACCGCCCATAAATACCTaGAGGCAGGTTTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QLGREQLKPNTEFLQKRKPPINT*RQVLVL
Trigger: CAAAACCAAAACCTGCCTTCAGGTATTTATGGGCGG...TTTTCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR GCA 90 bp ATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATTCTCTGCATCTTCATaGGCCTTGCCTGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: ITCPTYKNSWELAESFSLFSASS*ALPGCG
Trigger: GCCGCATCCAGGCAAGGCGCATGAAGATGCAGAGAA...TAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp TTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTAGGGCAGCTATTCTCTaGATCTTCATGCGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FQRITCPTYKNSWELAESRAAIL*IFMRLA
Trigger: GGCAAGGCGCATGAAGATGCAGAGAATAGCTGCCCT...AGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR GCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCCAAGGAGTGGATGTTaGGGGAAGTCTTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNPRSGC*GKSCHG
Trigger: GCCATGGCAAGACTTCCCGCAACATCCACTCCTTGG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp AATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTGCCTTTGGGTTTCAGAATTaGAGAGAAGGGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NDSNKPAHKYLKAGFGFAFGFQN*REGVVA
Trigger: AGCCACCACCCCTTCTCTGCAATTCTGAAACCCAAA...GGCAAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CCA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAACCCTCGGTTCTCACTaGGACAAAAATTATTTACAT +
Preference number: 4 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVTLGSH*DKNYLH
Trigger: ATGTAAATAATTTTTGTCCCAGTGAGAACCGAGGGT...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CCA 90 bp CTGATTGCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTCTGGACGCAGGCTTGTaGATGGTGATGTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LIAFQRITCPTYKNSWELLDAGL*MVMFRA
Trigger: TGCCCTGAACATCACCATCCACAAGCCTGCGTCCAG...AAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGCAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGAGCTGTGGCAAAAGTaGGAGGAGACGCCCTCATAT +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHELWQK*EETPSY
Trigger: ATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCCTATCCTTGAAAACCTaGCACCTTGTCCACCGATGC +
Preference number: 4 (lower is better)
Translates to: HVQHTKIAGNLQSLLAYSLSLKT*HLVHRC
Trigger: GCATCGGTGGACAAGGTGCCAGGTTTTCAAGGATAG...GCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp ATCAATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTGCAGAGAAGGGGTGGTaGCTCTGTTCTGTTCATCAG +
Preference number: 4 (lower is better)
Translates to: INDSNKPAHKYLKAGFGFAEKGW*LCSVHQ
Trigger: CTGATGAACAGAACAGAGCCACCACCCCTTCTCTGC...AAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CCA 90 bp TGTCAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGACCTGAAGGCAGGTTTTaGTTTTGCCATCATACGAGT +
Preference number: 4 (lower is better)
Translates to: CQLGREQLKPNTEFLQKRPEGRF*FCHHTS
Trigger: ACTCGTATGATGGCAAAACCAAAACCTGCCTTCAGG...TCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR TCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATAGATCAGGATCTCAGTaGTGGAACGGATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHRSGSQ*WNGWSP
Trigger: TGGAGACCATCCGTTCCATCACTGAGATCCTGATCT...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTGATCACCATTCAGAATaGCTTCAGCTAACGAGTTCA +
Preference number: 4 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSDHHSE*LQLTSS
Trigger: TGAACTCGTTAGCTGAAGTCATTCTGAATGGTGATC...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTGCTTGCTACGCTCCATaGTCACCATCTCGATCTCTT +
Preference number: 4 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSACYAP*SPSRSL
Trigger: AAGAGATCGAGATGGTGATCATGGAGCGTAGCAAGC...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR GCA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATCTCATCAGGACTTGCTaGTTCAGAAGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNLIRTC*FRSRQL
Trigger: GAGCTGCCTGCTTCTGAAGCAGCAAGTCCTGATGAG...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGGGATGTAGTGCAGCATaGCCTGGTTATCCACTTTAT +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRGCSAA*PGYPLY
Trigger: ATAAAGTGGATAACCAGGCCATGCTGCACTACATCC...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCATCACATGGCTCCCAATaGACCAGACCAAATTGGAGA +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSSHGSQ*TRPNWR
Trigger: TCTCCAATTTGGTCTGGTTCATTGGGAGCCATGTGA...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR TCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTTGGTCCTTTCCACTCTaGCAAATCAGCAATGGACTT +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTWSFPL*QISNGL
Trigger: AAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCA...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCACAACGTTTTTGTAGTTaGGTCTCTTTTGCACCCGCC +
Preference number: 4 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSQRFCS*VSFAPA
Trigger: GGCGGGTGCAAAAGAGACCCAACTACAAAAACGTTG...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CCA 90 bp TTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTATGATGCAGCGGATGTaGTCTGAGAAGATGAAGGTG +
Preference number: 4 (lower is better)
Translates to: FQRITCPTYKNSWELAESMMQRM*SEKMKV
Trigger: CACCTTCATCTTCTCAGACCACATCCGCTGCATCAT...AGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR TCA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTCAGAGAGAAAGACCTTaGACGCCCACCATGATGAAC +
Preference number: 4 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVQRERP*TPTMMN
Trigger: GTTCATCATGGTGGGCGTTCAAGGTCTTTCTCTCTG...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp GTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTTAAACACTATCCTTaGAAACCTGGCACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VQHTKIAGNLQSLLAYSSFKHYP*KPGTLS
Trigger: GGACAAGGTGCCAGGTTTTCAAGGATAGTGTTTAAA...AGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGATATTCCACGTTCATaGGCTTCATTGTCATGCTCC +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHDIPRS*ASLSCS
Trigger: GGAGCATGACAATGAAGCCCATGAACGTGGAATATC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTGTTAGAGATGAGCTGTaGCAAAAGTGGGAGGAGACG +
Preference number: 4 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVVRDEL*QKWEET
Trigger: CGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAAC...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp TGTCAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGAATTTTCAGAGCTGTTTaGGTTTCAGAATTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CQLGREQLKPNTEFLQKRIFRAV*VSELQR
Trigger: TCTCTGCAATTCTGAAACCCAAACAGCTCTGAAAAT...TCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CCA 90 bp AATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTGCCTATCCTAAACCTCTGTaGCCAGATATGTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: NDSNKPAHKYLKAGFGFAYPKPL*PDMSWN
Trigger: ATTCCAAGACATATCTGGCCACAGAGGTTTAGGATA...GGCAAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR TCA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTGTGAGGTCTCGTGACTaGTGTTCTCAAAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVVRSRD*CSQRGC
Trigger: ACATCCTCTTTGAGAACATCAGTCACGAGACCTCAC...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTGAGCAAATAATAAAGTaGGGTCTCGTGACTGATGTT +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTEQIIK*GLVTDV
Trigger: AACATCAGTCACGAGACCTCACTTTATTATTTGCTC...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR TCA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATAAATGTCGTACAAGGTaGACACTTTCTTCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHKCRTR*TLSSLA
Trigger: TGCGAGAGAAGAAAGTGTTCACCTTGTACGACATTT...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR GCA 90 bp AAACGAAAACATAAACTCACAATTACTGGCATCAATGACTCTAATAAACCCGCCGGCACATGTATGAAATaGAACTGCACAGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: KRKHKLTITGINDSNKPAGTCMK*NCTEKG
Trigger: ACCCTTCTCTGTGCAGTTGCATTTCATACATGTGCC...GGCGGGTTTATTAGAGTCATTGATGCCAGTAATTGTGAGTTTATGTTTTCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CCA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTTTTTTGGTCAAAACGTaGTACAGATACTTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTFLVKT*YRYLRW
Trigger: CCACCTCAAGTATCTGTACCACGTTTTGACCAAAAA...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGAAGAAATGGACAGTGTaGTTGTTGAGTTTTAACGAA +
Preference number: 4 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRKKWTV*LLSFNE
Trigger: TTCGTTAAAACTCAACAACCACACTGTCCATTTCTT...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CCA 90 bp CAGCTGGGTCGTGAGCAGCTAAAACCAAACACTGAATTTTTGCAGAAACGAAAATGGCCAGATATGTCTTaGAATTTAGAATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QLGREQLKPNTEFLQKRKWPDMS*NLESLG
Trigger: TCCTAAAGATTCTAAATTCCAAGACATATCTGGCCA...TTTTCGTTTCTGCAAAAATTCAGTGTTTGGTTTTAGCTGCTCACGACCCAGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CCA 90 bp ACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCATGACATACAAAAATAGCTaGGAACTTGCAGAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TKIAGNLQSLLAYSSLSMTYKNS*ELAESF
Trigger: AAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGT...CATGGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CCA 90 bp CATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCACATACAAAAATAGCTaGGAACTTGCAGAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: HTKIAGNLQSLLAYSSLSTYKNS*ELAESF
Trigger: AAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGT...GGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CAA 90 bp GTGTCAGCCGTGTCCTCGCAGAGCAGGGAAATGGTGGGCTGCCGGGCAGGGACGCCTCCTGGTCACGCCTaGGGGTGGGGCAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: VSAVSSQSREMVGCRAGTPPGHA*GWGSHL
Trigger: CAAGTGGCTGCCCCACCCCAAGGCGTGACCAGGAGG...CGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCTGCGAGGACACGGCTGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CAA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCGCATCTTCATGCGCCTaGCCTGGATGCGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLAASSCA*PGCGLW
Trigger: CCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATGC...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS GCA 90 bp TGTCCACCGATGCAAACACGGAGCGCTGCACTGTGGGGTCGCTGCTaGCCCGGCGCCCCTGGTCGTAGAAGCGGAAAGGCAGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CPPMQTRSAALWGRC*PGAPGRRSGKAGAE
Trigger: CTCAGCACCTGCCTTTCCGCTTCTACGACCAGGGGCGCCGGGGCAGCAGCGACCCCACAGTGCAGCGCTCCGTGTTTGCATCGGTGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261657.5
ENST00000409552.4
ENST00000409790.6
ENST00000428742.6
ENST00000436973.5
ENST00000459723.1
ENST00000646363.1
CDS GCA 90 bp CAGGTGGCGGCGGCGCTTTTCTCCTCGTCCGTGGTGTTCTGCTCCTaGACGGAGGTGCTGGCGGCCAGCTCTGAGAGCTTGCTACGCTCC +
Preference number: 5 (lower is better)
Translates to: QVAAALFSSSVVFCS*TEVLAASSESLLRS
Trigger: GGAGCGTAGCAAGCTCTCAGAGCTGGCCGCCAGCACCTCCGTGCAGGAGCAGAACACCACGGACGAGGAGAAAAGCGCCGCCGCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000494853.1
CDS CCA 90 bp GCGTGCTCTCAGAGCAGGTGGCGGCGGCGCTTTTCTCCTCGTCCGTaGTGTTCTGCTCCTGCACGGAGGTGCTGGCGGCCAGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: ACSQSRWRRRFSPRP*CSAPARRCWRPALR
Trigger: TCTCAGAGCTGGCCGCCAGCACCTCCGTGCAGGAGCAGAACACCACGGACGAGGAGAAAAGCGCCGCCGCCACCTGCTCTGAGAGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000494853.1
CDS-3UTR CAA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCACCAGCCAGGGCCAGCTaGATCCTCTCTACCCCTCTT +
Preference number: 5 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSPARAS*ILSTPL
Trigger: AAGAGGGGTAGAGAGGATCAAGCTGGCCCTGGCTGG...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGCCTCCTGGTCACGCCTaGGGGTGGGGCAGCCACTTG +
Preference number: 5 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSAPPGHA*GWGSHL
Trigger: CAAGTGGCTGCCCCACCCCAAGGCGTGACCAGGAGG...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACTTCTCGGCGTCTTCTaGGGCATCCTCGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: LGERLSWPHLTCWDRYLALLGVF*GILGGP
Trigger: GGGCCCACCGAGGATGCCCAAGAAGACGCCGAGAAG...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CCACGCGATGGTGAAGGCTGGCCCTTCCTGCCTGGGGGAGCGCCTCAGCTGGCCGAAGGGTCTGCTCCATaGCGTGCTCTCAGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PRDGEGWPFLPGGAPQLAEGSAP*RALRAG
Trigger: ACCTGCTCTGAGAGCACGCAATGGAGCAGACCCTTC...GGCCAGCTGAGGCGCTCCCCCAGGCAGGAAGGGCCAGCCTTCACCATCGCGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS GCA 90 bp AAGCAGGCAGCTCAGCTCCAGCGTCGCCAGCCGGATCTTCCCATCTaGAGAGCACACCAGGGTAAGCCTTGCACACCCAGGGTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: KQAAQLQRRQPDLPI*RAHQGKPCTPRVGR
Trigger: GCGCCCCACCCTGGGTGTGCAAGGCTTACCCTGGTGTGCTCTGCAGATGGGAAGATCCGGCTGGCGACGCTGGAGCTGAGCTGCCTGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS-3UTR CAA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACGCAGGGATAGGTGGTaGAGATGGCTGCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVARRDRW*RWLLGA
Trigger: GGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGCCCCAGCTATGAGGTCTTCTCGGCCGCATTaGGCACGGGGAGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: GPACPVWTGLSGSAPAMRSSRPH*ARGAGF
Trigger: GAATCCAGCTCCCCGTGCCAAATGCGGCCGAGAAGA...CCTCATAGCTGGGGCGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS GCA 90 bp TCAGAGCAGGTGGCGGCGGCGCTTTTCTCCTCGTCCGTGGTGTTCTaGTCCTGCACGGAGGTGCTGGCGGCCAGCTCTGAGAGCTTGCTA +
Preference number: 5 (lower is better)
Translates to: SEQVAAALFSSSVVF*SCTEVLAASSESLL
Trigger: TAGCAAGCTCTCAGAGCTGGCCGCCAGCACCTCCGTGCAGGAGCAGAACACCACGGACGAGGAGAAAAGCGCCGCCGCCACCTGCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000494853.1
CDS GCA 90 bp GGGTCTTCTCCACATCGCCACACGGCAGCCGCTTCACGAAGTCAATaGCCGTCAGTGGCGTGCCTGTTGGGGGCAGCAGGATGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GSSPHRHTAAASRSQ*PSVACLLGAAGWRR
Trigger: ACGCCTCCATCCTGCTGCCCCCAACAGGCACGCCACTGACGGGCATTGACTTCGTGAAGCGGCTGCCGTGTGGCGATGTGGAGAAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000465491.5
ENST00000646363.1
CDS-3UTR CAA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGAGCGAAGCCTGGCACCTaGTCCACCGATGCAAACACG +
Preference number: 5 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGAKPGT*STDANT
Trigger: CGTGTTTGCATCGGTGGACAAGGTGCCAGGCTTCGC...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGCGCAGGGATAGGTGGTaGAGATGGCTGCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMRRDRW*RWLLGA
Trigger: GGCCCCCAGCAGCCATCTCAACCACCTATCCCTGCG...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCTGCCCTCGGCAGGCCTaGCCGGGACAGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: PSLPGILQMATVVVVCPSCPRQA*PGQLAG
Trigger: CCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCA...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp ACCCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTATTCAAAGCCAAGGTTaGGGAGTTCCTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TRGSETRSPGSSLSGRCSIQSQG*GVPAAS
Trigger: GCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAAT...ACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGCTGGGACAGGTACCTaGCACGTCCAGAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRAGTGT*HVQKGT
Trigger: CGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGC...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TCCTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGACGCAAGTGTCTGGGTaGTGGGAGGCTGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SSGCQGPSVSCLDWPVWETQVSG*WEAAKA
Trigger: AGCCTTGGCAGCCTCCCACAACCCAGACACTTGCGT...CTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp AGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCATCAGTGGCGTGCCTGTaGGGGGCAGCAGGATGGAGG +
Preference number: 5 (lower is better)
Translates to: RWLLGAAQNGGCSQCVLPSVACL*GAAGWR
Trigger: CCTCCATCCTGCTGCCCCCAACAGGCACGCCACTGA...TGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS TCA 90 bp TGGGGAAGGGCTTGGAATGGGGGCTGGACGCAGGCTTGTGGATGGTaGTGTTCAGGGCACGGCTGTCGTCCTCCACGCCAGTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: WGRAWNGGWTQACGW*CSGHGCRPPRQSPA
Trigger: TGCAGGTGACTGGCGTGGAGGACGACAGCCGTGCCCTGAACATCACCATCCACAAGCCTGCGTCCAGCCCCCATTCCAAGCCCTTCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000428742.6
ENST00000465491.5
ENST00000646363.1
CDS GCA 90 bp TCTGTCAGCCAAGGCACTAGCAAGCTTGGGAGCGGCCATCTGGGCTaGCTCTCTACTGCGGCAGTCAGCAGGGCTGGCACCTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: SVSQGTSKLGSGHLG*LSTAAVSRAGTLST
Trigger: GGTGGACAAGGTGCCAGCCCTGCTGACTGCCGCAGTAGAGAGGCAGCCCAGATGGCCGCTCCCAAGCTTGCTAGTGCCTTGGCTGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS CCA 90 bp CACATCGCCACACGGCAGCCGCTTCACGAAGTCAATGCCCGTCAGTaGCGTGCCTGTTGGGGGCAGCAGGATGGAGGCGTCCATCATGAG +
Preference number: 5 (lower is better)
Translates to: HIATRQPLHEVNARQ*RACWGQQDGGVHHE
Trigger: CTCATGATGGACGCCTCCATCCTGCTGCCCCCAACAGGCACGCCACTGACGGGCATTGACTTCGTGAAGCGGCTGCCGTGTGGCGATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000465491.5
ENST00000646363.1
CDS-3UTR CAA 90 bp GTGTCAGCCGTGTCCTCGCAGAGCAGGGAAATGGTGGGCTGCCGGGCAGGGACGGATGCATCTGGGTCCTaGCTTGTACACACCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VSAVSSQSREMVGCRAGTDASGS*LVHTQS
Trigger: GGACTGGGTGTGTACAAGCAAGGACCCAGATGCATC...CGTCCCTGCCCGGCAGCCCACCATTTCCCTGCTCTGCGAGGACACGGCTGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CAA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGCCAGCCAGGGCCAGCTaGATCCTCTCTACCCCTCTT +
Preference number: 5 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGPARAS*ILSTPL
Trigger: AAGAGGGGTAGAGAGGATCAAGCTGGCCCTGGCTGG...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGGTAGTTGGGTCTCTTTaGCACCCGCCTCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAVVGSL*HPPLAL
Trigger: AAGGGCAAGAGGCGGGTGCAAAAGAGACCCAACTAC...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGTTGGCCAGGCGCTGCTaGGCGATGATGCAGCGGATG +
Preference number: 5 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMLARRC*AMMQRM
Trigger: CATCCGCTGCATCATCGCCAAGCAGCGCCTGGCCAA...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp AGATGGCTGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCACGCCACTCCCCCTCCTaGGCAGGACTGTGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: RWLLGAAQNGGCSQCVLPRHSPS*AGLCFL
Trigger: AAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGCG...TGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCAGCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGGGCCACACACACAGGGTGGGGCAGCCACTaGCCTTCTCTAGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CVLPVSGTGVPTSGATHTGWGSH*PSLVSA
Trigger: AGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCC...TGTGTGTGTGGCCCCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGCTGGGGGCCGCACAGAATGGTGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGGGTGGGGCAGCCACTaGCCTTCTCTAGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: CWGPHRMVGAPSVSCQSAGWGSH*PSLVSA
Trigger: AGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCC...CGCTGACTGGCAAGACACACTGGGAGCACCCACCATTCTGTGCGGCCCCCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS CCA 90 bp AACAGTCTGTCAGCCAAGGCACTAGCAAGCTTGGGAGCGGCCATCTaGGCTGCCTCTCTACTGCGGCAGTCAGCAGGGCTGGCACCTTGT +
Preference number: 5 (lower is better)
Translates to: NSLSAKALASLGAAI*AASLLRQSAGLAPC
Trigger: ACAAGGTGCCAGCCCTGCTGACTGCCGCAGTAGAGAGGCAGCCCAGATGGCCGCTCCCAAGCTTGCTAGTGCCTTGGCTGACAGACTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS-3UTR CAA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCAAGAGGGTGTCTTCCTTaGATTTCCATCATGGCCACA +
Preference number: 5 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSRGCLP*ISIMAT
Trigger: TGTGGCCATGATGGAAATCAAAGGAAGACACCCTCT...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGCACGGTGGTCGTGGTTaGTCCTTCCTTTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRHGGRG*SFLWVS
Trigger: AGAAACCCAAAGGAAGGACAAACCACGACCACCGTG...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCACACCTGCCCCTTAGGTaGCTTGTGAACGCAAGTGTC +
Preference number: 5 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVAHLPLR*LVNASV
Trigger: GACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTG...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCATGTTGCGGGAAGTCTaGCCATGGCCCCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: PSLPGILQMATVVVVCPSMLREV*PWPPPT
Trigger: GGTGGGCGGGGGCCATGGCAAGACTTCCCGCAACAT...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CTCTGGATGCCAGGGGCCCAGCGTGTCCTGTCTGGACTGGCCTGTCTGGGAGCGGTAACGGCCCGACTTTaGCCGCAAGATGTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LWMPGAQRVLSGLACLGAVTARL*PQDVQE
Trigger: TTCTTGAACATCTTGCGGCAAAAGTCGGGCCGTTAC...CGCTCCCAGACAGGCCAGTCCAGACAGGACACGCTGGGCCCCTGGCATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp AGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGACAGCTGGCTGGGCCGAGGATCTGGCTGGGCAGCGTaGTTCATGATCCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: RLKTALGRPCRDSWLGRGSGWAA*FMILMS
Trigger: ACTCATCAGGATCATGAACAACGCTGCCCAGCCAGA...TCCTCGGCCCAGCCAGCTGTCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGAATAGGCCTGCAAACTaGACCACTCCCCAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGNRPAN*TTPQPS
Trigger: GCTTGGCTGGGGAGTGGTCAAGTTTGCAGGCCTATT...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCACGTCCAGAAGTGAGGTGGGGTCCTTaGAAGCCAAAATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: RLSWPHLTCWDRYLARPEVRWGP*KPKWLV
Trigger: CACCAGCCATTTTGGCTTCAAAGGACCCCACCTCAC...TTCTGGACGTGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TCCCGAGACTACCCTATGGCCAGGCTCCGGCGGATACCTAATGCCCCTGGTGGGTTTTGCACCCGCCTCTaGCCCTTGTGCTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: SRDYPMARLRRIPNAPGGFCTRL*PLCLFI
Trigger: GATGAACAAGCACAAGGGCAAGAGGCGGGTGCAAAA...CCCACCAGGGGCATTAGGTATCCGCCGGAGCCTGGCCATAGGGTAGTCTCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CCAGTTGGAGCCCAGAGACTTCTGACAGCAGGCTGGTGGCCCACCCGTGTGGCAAGGACATCATCAGTCTaGATCAGGTCCTCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: PVGAQRLLTAGWWPTRVARTSSV*IRSSSR
Trigger: TCGGGAGGAGGACCTGATCAAGACTGATGATGTCCT...TGCCACACGGGTGGGCCACCAGCCTGCTGTCAGAAGTCTCTGGGCTCCAACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAGGGCTGGACGCAGGCTaGTGGATGGTGATGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPGLDAG*WMVMFR
Trigger: CCTGAACATCACCATCCACAAGCCTGCGTCCAGCCC...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGCCTGGATGCGGCCTTaGGCCAGGCGCTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLAWMRP*ARRCLA
Trigger: CGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGGC...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS GCA 90 bp TGCATCTTCATGCGCCTTGCCTGGATGCGGCCTTTGGCCAGGCGCTaGTTGGCGATGATGCAGCGGATGTGGTCTGAGAAGATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: CIFMRLAWMRPLARR*LAMMQRMWSEKMKV
Trigger: CACCTTCATCTTCTCAGACCACATCCGCTGCATCATCGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000428742.6
ENST00000646363.1
CDS GCA 90 bp TGGCTTCCCGCGATTCTGCCTGCGGGAGGAGGAAGGAAGCCCATGTaGTGGCACTACAGACTGGAGGGAGAGCTGCATGCTGAAACATTC +
Preference number: 5 (lower is better)
Translates to: WLPAILPAGGGRKPM*WHYRLEGELHAETF
Trigger: GAATGTTTCAGCATGCAGCTCTCCCTCCAGTCTGTAGTGCCAGCACATGGGCTTCCTTCCTCCTCCCGCAGGCAGAATCGCGGGAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS-3UTR CAA 90 bp CCGGGGCTCAGAGACACGGAGCCCAGGCAGCTCCCTGAGTGGCCGGTGCAGTCAGGAAGCTGTCTCTGTTaGGTTTTGGTGAAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: PGLRDTEPRQLPEWPVQSGSCLC*VLVKRN
Trigger: ATTTCTCTTCACCAAAACCAAACAGAGACAGCTTCC...TGACTGCACCGGCCACTCAGGGAGCTGCCTGGGCTCCGTGTCTCTGAGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGGGTGCTCCCAGTGTGTCTTGCCAGTCAGCGGCACTGGGGTCCCTACCAGCGGAGAGGGTGTCTTCCTTaGATTTCCATCATGGCCACA +
Preference number: 5 (lower is better)
Translates to: WVLPVCLASQRHWGPYQRRGCLP*ISIMAT
Trigger: TGTGGCCATGATGGAAATCAAAGGAAGACACCCTCT...CCGCTGGTAGGGACCCCAGTGCCGCTGACTGGCAAGACACACTGGGAGCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GTCCTCCCGGGCATGCTGTCCAGCCCTGACCAAGACCTCTCTCCTTCAGTGCTCAGGTCTGGAGGAAAGTaGTGGAAGGTCTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: VLPGMLSSPDQDLSPSVLRSGGK*WKVSPV
Trigger: CACTGGTGAGACCTTCCACAACTTTCCTCCAGACCT...GAGCACTGAAGGAGAGAGGTCTTGGTCAGGGCTGGACAGCATGCCCGGGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp TGGTCACGCCTTGGGGTGGGGCAGCCACTTGCCTTCTCTAGTTTCTGCTGCCCCTGGTTTGTCCTTCCTTaGGGTTTCTGCCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: WSRLGVGQPLAFSSFCCPWFVLP*GFCPCG
Trigger: GCCACATGGGCAGAAACCCAAAGGAAGGACAAACCA...GGGGCAGCAGAAACTAGAGAAGGCAAGTGGCTGCCCCACCCCAAGGCGTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCATGTTGCGGGAAGTCTaGCCATGGCCCCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: IWKEWTADLWAARPSFEVMLREV*PWPPPT
Trigger: GGTGGGCGGGGGCCATGGCAAGACTTCCCGCAACAT...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAGGCCGTTCTCCTCCCTaGTCCTGGTTCTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GLCFLHEVENCPRQALPGGRSPP*SWFSSE
Trigger: CTCACTGGAGAACCAGGACAAGGGAGGAGAACGGCC...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTCTTCTCGGCCGCATTaGGCACGGGGAGCTGGATTC +
Preference number: 5 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHSSRPH*ARGAGF
Trigger: GAATCCAGCTCCCCGTGCCAAATGCGGCCGAGAAGA...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp GGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACGGCTCACCTGGCACCTaGTCCACCGATGCAAACACG +
Preference number: 5 (lower is better)
Translates to: GRSGQLTCGQHGLLLKSHGSPGT*STDANT
Trigger: CGTGTTTGCATCGGTGGACAAGGTGCCAGGTGAGCC...GTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CGGCGGATACCTAATGCCCCTGGTGGGCACATCTGCTGGCAGGTCTGGAGGAAAAGGTCTGGAGGAAAGTaGTGGAAGGTCTCACCAGTG +
Preference number: 5 (lower is better)
Translates to: RRIPNAPGGHICWQVWRKRSGGK*WKVSPV
Trigger: CACTGGTGAGACCTTCCACAACTTTCCTCCAGACCT...TTTCCTCCAGACCTGCCAGCAGATGTGCCCACCAGGGGCATTAGGTATCCGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTATTCAAAGCCAAGGTTaGGGAGTTCCTGCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VSGSRAGRVERNILGAVSIQSQG*GVPAAS
Trigger: GCTGGCCGCAGGAACTCCCAAACCTTGGCTTTGAAT...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GGGCTGGCTCCCAGACCTCCTTACATAAGCAAAGCTTCTGGGAGCCCTGGTTATACGCAAGTGTCTGGGTaGTGGGAGGCTGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: GLAPRPPYISKASGSPGYTQVSG*WEAAKA
Trigger: AGCCTTGGCAGCCTCCCACAACCCAGACACTTGCGT...ATAACCAGGGCTCCCAGAAGCTTTGCTTATGTAAGGAGGTCTGGGAGCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CATCTGCATTCGCCGCGGTGTCTCCGCTGGTCCCAGCCTGCACGTGAAGAGATGTCTGCTTCCGTTTCGTaGACGATTACCAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: HLHSPRCLRWSQPAREEMSASVS*TITNWS
Trigger: TGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGA...CATCTCTTCACGTGCAGGCTGGGACCAGCGGAGACACCGCGGCGAATGCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTCATCTGGGTCCTTGCTaGTACACACCCAGTCCGAAT +
Preference number: 5 (lower is better)
Translates to: VSGSRAGRVERNILGAVSHLGPC*YTPSPN
Trigger: ATTCGGACTGGGTGTGTACAAGCAAGGACCCAGATG...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTTGGTTTGTCCTTCCTTaGGGTTTCTGCCCATGTGGC +
Preference number: 5 (lower is better)
Translates to: VSGSRAGRVERNILGAVSWFVLP*GFCPCG
Trigger: GCCACATGGGCAGAAACCCAAAGGAAGGACAAACCA...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGAGTGAGGTGGGGTCCTTaGAAGCCAAAATGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: GLCFLHEVENCPRQALPGVRWGP*KPKWLV
Trigger: CACCAGCCATTTTGGCTTCAAAGGACCCCACCTCAC...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCTCCAAGGAGTGGATGTaGCGGGAAGTCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: PSLPGILQMATVVVVCPSSKEWM*REVLPW
Trigger: CCATGGCAAGACTTCCCGCAACATCCACTCCTTGGA...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp GTGTCTGGCTCCCGAGCTGGCCGAGTAGAAAGGAACATCTTGGGGGCTGTGTCTACCATGCCGCCATCCTaGGTGATCACTGTACATGCA +
Preference number: 5 (lower is better)
Translates to: VSGSRAGRVERNILGAVSTMPPS*VITVHA
Trigger: TGCATGTACAGTGATCACCAAGGATGGCGGCATGGT...AGACACAGCCCCCAAGATGTTCCTTTCTACTCGGCCAGCTCGGGAGCCAGACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGCATCTTCATGCGCCTaGCCTGGATGCGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: IWKEWTADLWAARPSFEVASSCA*PGCGLW
Trigger: CCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATGC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS TCA 90 bp TCTGCTGGAACTGCTGGGTTAAGAGAAATTCTCCTTGTGCCGGGCTaGGCAGAGGACCGTGGTGACGCCCTGAGGGGCACAAGCATTATA +
Preference number: 5 (lower is better)
Translates to: SAGTAGLREILLVPG*AEDRGDALRGTSII
Trigger: TATAATGCTTGTGCCCCTCAGGGCGTCACCACGGTCCTCTGCTCAGCCCGGCACAAGGAGAATTTCTCTTAACCCAGCAGTTCCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS GCA 90 bp CGTGGAGGTGGAAGGCTGGGACTTGGGCCCATACTCTTTGGCTTGTaGTGGGTGCTTTCATTCTGCTGCTTCTCACCTGGGCAAATACTC +
Preference number: 5 (lower is better)
Translates to: RGGGRLGLGPILFGL*WVLSFCCFSPGQIL
Trigger: GAGTATTTGCCCAGGTGAGAAGCAGCAGAATGAAAGCACCCAGCACAAGCCAAAGAGTATGGGCCCAAGTCCCAGCCTTCCACCTCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646363.1
CDS CCA 90 bp GGAGGTGGAAGGCTGGGACTTGGGCCCATACTCTTTGGCTTGTGCTaGGTGCTTTCATTCTGCTGCTTCTCACCTGGGCAAATACTCTGC +
Preference number: 5 (lower is better)
Translates to: GGGRLGLGPILFGLC*VLSFCCFSPGQILC
Trigger: GCAGAGTATTTGCCCAGGTGAGAAGCAGCAGAATGAAAGCACCCAGCACAAGCCAAAGAGTATGGGCCCAAGTCCCAGCCTTCCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646363.1
CDS-3UTR CAA 90 bp GCAAAGCTTCTGGGAGCCCTGGTTATAGGAAATCCTCACCCCACACACCTGGAGGATGCATCTGGGTCCTaGCTTGTACACACCCAGTCC +
Preference number: 5 (lower is better)
Translates to: AKLLGALVIGNPHPTHLEDASGS*LVHTQS
Trigger: GGACTGGGTGTGTACAAGCAAGGACCCAGATGCATC...CTCCAGGTGTGTGGGGTGAGGATTTCCTATAACCAGGGCTCCCAGAAGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CAGGGTAGAAGCCCTGCCCTGAGCAGTGTCTTTTATCCTCCGCTGGTCCTCCCAGTAGAAAGGAACATCTaGGGGGCTGTGTCTGATGCA +
Preference number: 5 (lower is better)
Translates to: QGRSPALSSVFYPPLVLPVERNI*GAVSDA
Trigger: TGCATCAGACACAGCCCCCAAGATGTTCCTTTCTAC...TGGGAGGACCAGCGGAGGATAAAAGACACTGCTCAGGGCAGGGCTTCTACCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS TCA 90 bp GAGTCTGCTTCCGTTTCGTTGACGATTACCAACTGGTCAGGAAGGTaGGGCTTAGGCAGTTCTGGACTCATGGGGGCATCTGCTGGACTC +
Preference number: 5 (lower is better)
Translates to: ESASVSLTITNWSGR*GLGSSGLMGASAGL
Trigger: GAGTCCAGCAGATGCCCCCATGAGTCCAGAACTGCCTAAGCCTCACCTTCCTGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS TCA 90 bp GAAGCCCATGTGCTGGCACTACAGACTGGAGGGAGAGCTGCATGCTaGAACATTCCAGTGGAGCAGCAAACAGGGAGGCAGGGACATAAT +
Preference number: 5 (lower is better)
Translates to: EAHVLALQTGGRAAC*NIPVEQQTGRQGHN
Trigger: ATTATGTCCCTGCCTCCCTGTTTGCTGCTCCACTGGAATGTTTCAGCATGCAGCTCTCCCTCCAGTCTGTAGTGCCAGCACATGGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS GCA 90 bp CTTGGGCCCATACTCTTTGGCTTGTGCTGGGTGCTTTCATTCTGCTaGTTCTCACCTGGGCAAATACTCTGCTGCTGGCACCTTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LGPILFGLCWVLSFC*FSPGQILCCWHLVH
Trigger: GTGGACAAGGTGCCAGCAGCAGAGTATTTGCCCAGGTGAGAAGCAGCAGAATGAAAGCACCCAGCACAAGCCAAAGAGTATGGGCCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646363.1
CDS GCA 90 bp GGACTTGGGCCCATACTCTTTGGCTTGTGCTGGGTGCTTTCATTCTaGTGCTTCTCACCTGGGCAAATACTCTGCTGCTGGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: GLGPILFGLCWVLSF*CFSPGQILCCWHLV
Trigger: GACAAGGTGCCAGCAGCAGAGTATTTGCCCAGGTGAGAAGCAGCAGAATGAAAGCACCCAGCACAAGCCAAAGAGTATGGGCCCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646363.1
CDS GCA 90 bp GTGGAAGGCTGGGACTTGGGCCCATACTCTTTGGCTTGTGCTGGGTaGTTTCATTCTGCTGCTTCTCACCTGGGCAAATACTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: VEGWDLGPYSLACAG*FHSAASHLGKYSAA
Trigger: AGCAGCAGAGTATTTGCCCAGGTGAGAAGCAGCAGAATGAAAGCACCCAGCACAAGCCAAAGAGTATGGGCCCAAGTCCCAGCCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646363.1
CDS CCA 90 bp CCTTTTGAACCACCCTCTGTACCTTTAGCCTTCTCGGCGTCTTCTTaGGCATCCTCGGTGGGCCCTTTCTCCTCATCTTCTTCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PFEPPSVPLAFSASS*ASSVGPFSSSSSSP
Trigger: TGGGGAAGAAGAAGATGAGGAGAAAGGGCCCACCGAGGATGCCCAAGAAGACGCCGAGAAGGCTAAAGGTACAGAGGGTGGTTCAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409790.6
ENST00000494853.1
CDS-3UTR CAA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCAGCGAAGCCTGGCACCTaGTCCACCGATGCAAACACG +
Preference number: 5 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPAKPGT*STDANT
Trigger: CGTGTTTGCATCGGTGGACAAGGTGCCAGGCTTCGC...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGCTCCTGGCCACGTTCTaGCTGGGCTTAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWLLATF*LGLESA
Trigger: AGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAG...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGACGCCACTCCCCCTCCTaGGCAGGACTGTGTTTCCTT +
Preference number: 5 (lower is better)
Translates to: EWGREPWGFHIQISSSSRRHSPS*AGLCFL
Trigger: AAGGAAACACAGTCCTGCCAAGGAGGGGGAGTGGCG...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp CTTTTCCTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAGCTGGGACAGGTACCTaGCACGTCCAGAAAGGGACG +
Preference number: 5 (lower is better)
Translates to: LFLEKSFHDGRPLGCYSRAGTGT*HVQKGT
Trigger: CGTCCCTTTCTGGACGTGCAAGGTACCTGTCCCAGC...TCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCCAAGGAGTGGATGTaGCGGGAAGTCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: IWKEWTADLWAARPSFEVSKEWM*REVLPW
Trigger: CCATGGCAAGACTTCCCGCAACATCCACTCCTTGGA...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CTGGGGGAGCGCCTCAGCTGGCCCCATCTGACCTGCTGGGACAGGTACCTTGCAAAATGGACAGTGTGGTaGTTGAGTTTTAACGAAAGT +
Preference number: 5 (lower is better)
Translates to: LGERLSWPHLTCWDRYLAKWTVW*LSFNES
Trigger: ACTTTCGTTAAAACTCAACAACCACACTGTCCATTT...TGCAAGGTACCTGTCCCAGCAGGTCAGATGGGGCCAGCTGAGGCGCTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGACTCTCCCCACTCGTCTaGATGCCTTTTGAACCACCC +
Preference number: 5 (lower is better)
Translates to: IQISSSSRGRVTDSELWGLSPLV*MPFEPP
Trigger: GGGTGGTTCAAAAGGCATCAAGACGAGTGGGGAGAG...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS TCA 90 bp CACCATCTCGATCTCTTCACTCTCCCCACTCGTCTTGATGCCTTTTaGACCACCCTCTGTACCTTTAGCCTTCTCGGCGTCTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: HHLDLFTLPTRLDAF*TTLCTFSLLGVFLG
Trigger: GCCCAAGAAGACGCCGAGAAGGCTAAAGGTACAGAGGGTGGTTCAAAAGGCATCAAGACGAGTGGGGAGAGTGAAGAGATCGAGATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409790.6
ENST00000494853.1
CDS TCA 90 bp TCAGTGGCGTGCCTGTTGGGGGCAGCAGGATGGAGGCGTCCATCATaGGATATTCCACGTTCATGGGCTTCATTGTCATGCTCCTATACT +
Preference number: 5 (lower is better)
Translates to: SVACLLGAAGWRRPS*DIPRSWASLSCSYT
Trigger: AGTATAGGAGCATGACAATGAAGCCCATGAACGTGGAATATCTCATGATGGACGCCTCCATCCTGCTGCCCCCAACAGGCACGCCACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000465491.5
ENST00000646363.1
CDS TCA 90 bp GTTAAGAGAAATTCTCCTTGTGCCGGGCTGAGCAGAGGACCGTGGTaGCGCCCTGAGGGGCACAAGCATTATAATCTATATCGGCCACCT +
Preference number: 5 (lower is better)
Translates to: VKRNSPCAGLSRGPW*RPEGHKHYNLYRPP
Trigger: AGGTGGCCGATATAGATTATAATGCTTGTGCCCCTCAGGGCGTCACCACGGTCCTCTGCTCAGCCCGGCACAAGGAGAATTTCTCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS TCA 90 bp GAAGGGGTGGTGGCTCTGTTCTGTTCATCAGCTCTGGCACATGTATaGAATGCAACTGCACAGAGAAGGGTCTGGCACCTTGTCCACCGA +
Preference number: 5 (lower is better)
Translates to: EGVVALFCSSALAHV*NATAQRRVWHLVHR
Trigger: TCGGTGGACAAGGTGCCAGACCCTTCTCTGTGCAGTTGCATTTCATACATGTGCCAGAGCTGATGAACAGAACAGAGCCACCACCCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS CCA 90 bp TCCATGATCACCATCTCGATCTCTTTAGCCTTCTCGGCGTCTTCTTaGGCATCCTCGGTGGGCCCTTTCTCCTCATCTTCTTCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SMITISISLAFSASS*ASSVGPFSSSSSSP
Trigger: TGGGGAAGAAGAAGATGAGGAGAAAGGGCCCACCGAGGATGCCCAAGAAGACGCCGAGAAGGCTAAAGAGATCGAGATGGTGATCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCTTCCTCTGCTTCCGTTTCGTaGACGATTACCAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: PSLPGILQMATVVVVCPSSASVS*TITNWS
Trigger: TGACCAGTTGGTAATCGTCAACGAAACGGAAGCAGA...GGAAGGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTACTCCTGGCCACGTTCTaGCTGGGCTTAGAGTCTGCT +
Preference number: 5 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVLLATF*LGLESA
Trigger: AGCAGACTCTAAGCCCAGCAAGAACGTGGCCAGGAG...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGAACGTGGTACAGATACTaGAGGTGGTCCAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGTWYRY*RWSKEW
Trigger: CCACTCCTTGGACCACCTCAAGTATCTGTACCACGT...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CCTTCCTTCTCTTCCAGGGATTCTGCAGATGGCCACGGTGGTCGTGGTTTGTCCGGGTGGTTGAAAAACTaGATGGCTTCTGTGTACAGG +
Preference number: 5 (lower is better)
Translates to: PSFSSRDSADGHGGRGLSGWLKN*MASVYR
Trigger: CCTGTACACAGAAGCCATCAAGTTTTTCAACCACCC...GGACAAACCACGACCACCGTGGCCATCTGCAGAATCCCTGGAAGAGAAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp GGACTGTGTTTCCTTCATGAGGTTGAAAACTGCCCTCGGCAGGCCTTGCCGGGATCAGTGAGCACATCGTaGAGGAACTCACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: GLCFLHEVENCPRQALPGSVSTS*RNSQLM
Trigger: CATCAACTGTGAGTTCCTCAACGATGTGCTCACTGA...TCCCGGCAAGGCCTGCCGAGGGCAGTTTTCAACCTCATGAAGGAAACACAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp TCCTTCCTTTGGGTTTCTGCCCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTAGCACTCATCAGGACTaGCTGCTTCAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SFLWVSAHVAPFLSCAFSSTHQD*LLQKQA
Trigger: TGCCTGCTTCTGAAGCAGCAAGTCCTGATGAGTGCT...AGAAAACGCACAGCTCAGAAAGGGGGCCACATGGGCAGAAACCCAAAGGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS GCA 90 bp GTGACTTGTCCTAGGTCTCATAGCTGGGTAGTGGTAGACTGCAGGTaGTCAGAAAGCCAAAACCCGCATCTGGCATCTCTCCTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VTCPRSHSWVVVDCR*SESQNPHLASLLEA
Trigger: TGCTTCTAGGAGAGATGCCAGATGCGGGTTTTGGCTTTCTGAGCACCTGCAGTCTACCACTACCCAGCTATGAGACCTAGGACAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS GCA 90 bp GGCTCTGTTCTGTTCATCAGCTCTGGCACATGTATGAAATGCAACTaGACAGAGAAGGGTCTGGCACCTTGTCCACCGATGCAAACACGG +
Preference number: 5 (lower is better)
Translates to: GSVLFISSGTCMKCN*TEKGLAPCPPMQTR
Trigger: CCGTGTTTGCATCGGTGGACAAGGTGCCAGACCCTTCTCTGTGCAGTTGCATTTCATACATGTGCCAGAGCTGATGAACAGAACAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS GCA 90 bp GGTGGTGGCTCTGTTCTGTTCATCAGCTCTGGCACATGTATGAAATaGAACTGCACAGAGAAGGGTCTGGCACCTTGTCCACCGATGCAA +
Preference number: 5 (lower is better)
Translates to: GGGSVLFISSGTCMK*NCTEKGLAPCPPMQ
Trigger: TTGCATCGGTGGACAAGGTGCCAGACCCTTCTCTGTGCAGTTGCATTTCATACATGTGCCAGAGCTGATGAACAGAACAGAGCCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS CCA 90 bp TGGCACTACAGACTGGAGGGAGAGCTGCATGCTGAAACATTCCAGTaGAGCAGCAAACAGGGAGGCAGGGACATAATACATGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: WHYRLEGELHAETFQ*SSKQGGRDIIHGEA
Trigger: TGCTTCTCCATGTATTATGTCCCTGCCTCCCTGTTTGCTGCTCCACTGGAATGTTTCAGCATGCAGCTCTCCCTCCAGTCTGTAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS-3UTR CAA 90 bp CCATGTGGCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTCACGGTGGTCGTGGTTaGTCCTTCCTTTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: PCGPLSELCVFSMEAKVLHGGRG*SFLWVS
Trigger: AGAAACCCAAAGGAAGGACAAACCACGACCACCGTG...AAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGCCACATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGACGTGGTACAGATACTaGAGGTGGTCCAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLTWYRY*RWSKEW
Trigger: CCACTCCTTGGACCACCTCAAGTATCTGTACCACGT...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp CTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTACCCGCCTCTTGCCCTaGTGCTTGTTCATCTCAAGG +
Preference number: 5 (lower is better)
Translates to: LCVFSMEAKVLVPAAMKATRLLP*CLFISR
Trigger: CCTTGAGATGAACAAGCACAAGGGCAAGAGGCGGGT...AGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGTCAGTGGCGTGCCTGTaGGGGGCAGCAGGATGGAGG +
Preference number: 5 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRSVACL*GAAGWR
Trigger: CCTCCATCCTGCTGCCCCCAACAGGCACGCCACTGA...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGCCTGGATGCGGCCTTaGGCCAGGCGCTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHAWMRP*ARRCLA
Trigger: CGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGGC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp ACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCATGGCCTGGATGCGGCCTTaGGCCAGGCGCTGCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TKIAGNLQSLLAYSSLSMAWMRP*ARRCLA
Trigger: CGCCAAGCAGCGCCTGGCCAAAGGCCGCATCCAGGC...CATGGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CAA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTCAGCACGGCCTTCTTTaGAAGTCTCACTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KEWTADLWAARPSFEVSLQHGLL*KSHFFR
Trigger: CCTGAAGAAGTGAGACTTCAAAAGAAGGCCGTGCTG...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS TCA 90 bp ATGCAATCAAGTCGCTGTTATTCAGATCCAGGACATCATCAGTCTTaGTCAGGTCCTCCTCCCGAGTCAGCGGCAACTGTGTCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: MQSSRCYSDPGHHQS*SGPPPESAATVSQA
Trigger: AGCCTGAGACACAGTTGCCGCTGACTCGGGAGGAGGACCTGATCAAGACTGATGATGTCCTGGATCTGAATAACAGCGACTTGATTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000465491.5
ENST00000646363.1
CDS GCA 90 bp AGTGAAGTGACTTGTCCTAGGTCTCATAGCTGGGTAGTGGTAGACTaGAGGTGCTCAGAAAGCCAAAACCCGCATCTGGCATCTCTCCTA +
Preference number: 5 (lower is better)
Translates to: SEVTCPRSHSWVVVD*RCSESQNPHLASLL
Trigger: TAGGAGAGATGCCAGATGCGGGTTTTGGCTTTCTGAGCACCTGCAGTCTACCACTACCCAGCTATGAGACCTAGGACAAGTCACTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS-3UTR CAA 90 bp CTGGAGAAATCTTTCCATGATGGGAGGCCTCTCGGCTGCTATAGCAGAAAACCACATCTGGGTCCTTGCTaGTACACACCCAGTCCGAAT +
Preference number: 5 (lower is better)
Translates to: LEKSFHDGRPLGCYSRKPHLGPC*YTPSPN
Trigger: ATTCGGACTGGGTGTGTACAAGCAAGGACCCAGATG...TGGTTTTCTGCTATAGCAGCCGAGAGGCCTCCCATCATGGAAAGATTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTACAGAGAGAAAGACCTaGAACGCCCACCATGATGAA +
Preference number: 5 (lower is better)
Translates to: KEWTADLWAARPSFEVSLTERKT*NAHHDE
Trigger: TTCATCATGGTGGGCGTTCAAGGTCTTTCTCTCTGT...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS TCA 90 bp GCTCTTATGCAAACTCCTCTGTGGGTCTTTCAAGTTTATTTCTGGTaGAAGGTCCCACTGTGGAGAGGAGGAGGCCTTCAGGCTATGCCT +
Preference number: 5 (lower is better)
Translates to: ALMQTPLWVFQVYFW*KVPLWRGGGLQAMP
Trigger: AGGCATAGCCTGAAGGCCTCCTCCTCTCCACAGTGGGACCTTTCACCAGAAATAAACTTGAAAGACCCACAGAGGAGTTTGCATAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS GCA 90 bp AGGATCACTTATCACGTACTTATGGAGTACCTAGCCAAGGGCAGGTaGTGGGATAACAGAGACAAACGCGCAAAGCAGAGAAAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RITYHVLMEYLAKGR*WDNRDKRAKQRKLG
Trigger: TCCCAGCTTTCTCTGCTTTGCGCGTTTGTCTCTGTTATCCCAGCACCTGCCCTTGGCTAGGTACTCCATAAGTACGTGATAAGTGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463459.1
ENST00000463896.5
CDS-3UTR CAA 90 bp TTCCACCCTCGTGTTCAGTACCCACGAAGCATGAGTCATGCTGGCGAAAGCAGGGGAAGCTGTCTCTGTTaGGTTTTGGTGAAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: FHPRVQYPRSMSHAGESRGSCLC*VLVKRN
Trigger: ATTTCTCTTCACCAAAACCAAACAGAGACAGCTTCC...CCTGCTTTCGCCAGCATGACTCATGCTTCGTGGGTACTGAACACGAGGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp AGTCCGAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGTAGAAAGGAACATCTaGGGGGCTGTGTCTGATGCA +
Preference number: 5 (lower is better)
Translates to: SPNGEGNHGVSIFRSAAVVERNI*GAVSDA
Trigger: TGCATCAGACACAGCCCCCAAGATGTTCCTTTCTAC...TACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTCGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp AAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCTCACTTGTGACTGTGGTGTTTTaGGTCAAAACGTGGTACAGA +
Preference number: 5 (lower is better)
Translates to: KEWTADLWAARPSFEVSLVTVVF*VKTWYR
Trigger: TCTGTACCACGTTTTGACCAAAAACACCACAGTCAC...AAGTGAGACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp GGGTTAGAGATGAGCTGTGGCAAAAGTGGGAGGAGACGCCCTCATATGGAAGGACGTTCATGGGCTTCATaGTCATGCTCCTATACTCAT +
Preference number: 5 (lower is better)
Translates to: GLEMSCGKSGRRRPHMEGRSWAS*SCSYTH
Trigger: ATGAGTATAGGAGCATGACAATGAAGCCCATGAACG...TCCTTCCATATGAGGGCGTCTCCTCCCACTTTTGCCACAGCTCATCTCTAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTTTGGCCAGGCGCTGCTaGGCGATGATGCAGCGGATG +
Preference number: 5 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFLARRC*AMMQRM
Trigger: CATCCGCTGCATCATCGCCAAGCAGCGCCTGGCCAA...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp ATATGGAAGGAGTGGACAGCTGACCTGTGGGCAGCACGGCCTTCTTTTGAAGTCGGGCTGTGTTTAATCTaGCGCTGTGCTTTGACAAAT +
Preference number: 5 (lower is better)
Translates to: IWKEWTADLWAARPSFEVGLCLI*RCALTN
Trigger: ATTTGTCAAAGCACAGCGCAAGATTAAACACAGCCC...GACTTCAAAAGAAGGCCGTGCTGCCCACAGGTCAGCTGTCCACTCCTTCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS TCA 90 bp CAAATACAGAGCTGTCATTTTGATCTCCCCAGATCAGGATCTCAGTaGTGGAACGGATGGTCTCCACTAGCAGGTTCCGGTTCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: QIQSCHFDLPRSGSQ*WNGWSPLAGSGSVL
Trigger: CAGAACAGAACCGGAACCTGCTAGTGGAGACCATCCGTTCCATCACTGAGATCCTGATCTGGGGAGATCAAAATGACAGCTCTGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409552.4
ENST00000409790.6
CDS TCA 90 bp AAATATCCACAGCCAGGAATCGCTGGACCATGCCGCCATCCTTGGTaGTCACTGTACATGCAATCAAGTCGCTGTTATTCAGATCCAGGA +
Preference number: 5 (lower is better)
Translates to: KYPQPGIAGPCRHPW*SLYMQSSRCYSDPG
Trigger: TCCTGGATCTGAATAACAGCGACTTGATTGCATGTACAGTGATCACCAAGGATGGCGGCATGGTCCAGCGATTCCTGGCTGTGGATATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000465491.5
ENST00000646363.1
CDS-3UTR CAA 90 bp GCCCCCTTTCTGAGCTGTGCGTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGTACAGAGCTGTCATTTaGATCTCCCCAGATCAGGAT +
Preference number: 5 (lower is better)
Translates to: APFLSCAFSLWKQRSLYLYRAVI*ISPDQD
Trigger: ATCCTGATCTGGGGAGATCAAAATGACAGCTCTGTA...CAGGTACAAGGACCTTTGCTTCCATAGAGAAAACGCACAGCTCAGAAAGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp ATTCAGATCAGCAGCAGTAGCAGAGGGAGAGTGACAGACTCAGAGCTCTGGGGATTGAGGAACTCACAGTaGATGATCAGGATGTCATTG +
Preference number: 5 (lower is better)
Translates to: IQISSSSRGRVTDSELWGLRNSQ*MIRMSL
Trigger: CAATGACATCCTGATCATCAACTGTGAGTTCCTCAA...TCCCCAGAGCTCTGAGTCTGTCACTCTCCCTCTGCTACTGCTGCTGATCTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTGGCCGTTCTCCTCCCTaGTCCTGGTTCTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFGRSPP*SWFSSE
Trigger: CTCACTGGAGAACCAGGACAAGGGAGGAGAACGGCC...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTGGGCTGGACGCAGGCTaGTGGATGGTGATGTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFGLDAG*WMVMFR
Trigger: CCTGAACATCACCATCCACAAGCCTGCGTCCAGCCC...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTATCCATGGATTTGGCCAGGCGCTGCTaGGCGATGATGCAGCGGATG +
Preference number: 5 (lower is better)
Translates to: KIAGNLQSLLAYSSLSMDLARRC*AMMQRM
Trigger: CATCCGCTGCATCATCGCCAAGCAGCGCCTGGCCAA...ATCCATGGATAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CAA 90 bp GCTTTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGGCATCTTCATGCGCCTaGCCTGGATGCGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: AFQRITCPTYKNSWELAEASSCA*PGCGLW
Trigger: CCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATGC...CTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CAA 90 bp CGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCAAGGCACTAGCAAGCTaGGGAGCGGCCATCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RITCPTYKNSWELAESFSKALAS*GAAIWA
Trigger: AGCCCAGATGGCCGCTCCCAAGCTTGCTAGTGCCTT...GCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS TCA 90 bp CAAAACCCGCATCTGGCATCTCTCCTAGAAGCATCTGTAACTGACTaGCTGAAGGACAACTGCTCTTATGCAAACTCCTCTGTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: QNPHLASLLEASVTD*LKDNCSYANSSVGL
Trigger: AAGACCCACAGAGGAGTTTGCATAAGAGCAGTTGTCCTTCAGTCAGTCAGTTACAGATGCTTCTAGGAGAGATGCCAGATGCGGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463896.5
CDS-3UTR CAA 90 bp GAATGGGGAAGGGAACCATGGGGTTTCCATATTCAGATCAGCAGCAGTAGCAGAGTGACTGTGGTGTTTTaGGTCAAAACGTGGTACAGA +
Preference number: 5 (lower is better)
Translates to: EWGREPWGFHIQISSSSRVTVVF*VKTWYR
Trigger: TCTGTACCACGTTTTGACCAAAAACACCACAGTCAC...TCTGCTACTGCTGCTGATCTGAATATGGAAACCCCATGGTTCCCTTCCCCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp GTTTTCTCTATGGAAGCAAAGGTCCTTGTACCTGCAGCCATGAAGGCTGGGTGGATGCTTTCAGGGTGGTaGAAAAACTTGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: VFSMEAKVLVPAAMKAGWMLSGW*KNLMAS
Trigger: AGAAGCCATCAAGTTTTTCAACCACCCTGAAAGCAT...CCACCCAGCCTTCATGGCTGCAGGTACAAGGACCTTTGCTTCCATAGAGAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS-3UTR CAA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTCTTCTCGGCGTCTTCTaGGGCATCCTCGGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVLLGVF*GILGGP
Trigger: GGGCCCACCGAGGATGCCCAAGAAGACGCCGAGAAG...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp TTTCAACGGATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTAGCAGGGCTGGCACCTaGTCCACCGATGCAAACACG +
Preference number: 5 (lower is better)
Translates to: FQRITCPTYKNSWELAESSRAGT*STDANT
Trigger: CGTGTTTGCATCGGTGGACAAGGTGCCAGCCCTGCT...AGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTATCCGTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436973.5
CDS TCA 90 bp CATCAGTCTGCACGCAGTCATCGAGTTCGATCACATGGCTCCCAATaGACCAGACCAAATTGGAGAAGTAAGGAACAGCAGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: HQSARSHRVRSHGSQ*TRPNWRSKEQQFYL
Trigger: GAGATAAAACTGCTGTTCCTTACTTCTCCAATTTGGTCTGGTTCATTGGGAGCCATGTGATCGAACTCGATGACTGCGTGCAGACTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409552.4
ENST00000409790.6
ENST00000494853.1
CDS-3UTR CAA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTGTAACGGCCCGACTTTaGCCGCAAGATGTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSVTARL*PQDVQE
Trigger: TTCTTGAACATCTTGCGGCAAAAGTCGGGCCGTTAC...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CTTTCTAGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTACCCGCCTCTTGCCCTaGTGCTTGTTCATCTCAAGG +
Preference number: 5 (lower is better)
Translates to: LSSHLTWRRKLLSHNFSTTRLLP*CLFISR
Trigger: CCTTGAGATGAACAAGCACAAGGGCAAGAGGCGGGT...AGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACTAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGAAGGGTCTGCTCCATaGCGTGCTCTCAGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHEGSAP*RALRAG
Trigger: ACCTGCTCTGAGAGCACGCAATGGAGCAGACCCTTC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTATAGCTCTTTAGGGCTGGACGCAGGCTaGTGGATGGTGATGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QHTKIAGNLQSLLAYSSLGLDAG*WMVMFR
Trigger: CCTGAACATCACCATCCACAAGCCTGCGTCCAGCCC...TAAAGAGCTATAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428742.6
CDS-3UTR CAA 90 bp ATAACATGTCCAACATACAAAAATAGCTGGGAACTTGCAGAGTCTTTTAGCCTAGCATCTTCATGCGCCTaGCCTGGATGCGGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: ITCPTYKNSWELAESFSLASSCA*PGCGLW
Trigger: CCAAAGGCCGCATCCAGGCAAGGCGCATGAAGATGC...TAGGCTAAAAGACTCTGCAAGTTCCCAGCTATTTTTGTATGTTGGACATGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428742.6
ENST00000436973.5
CDS-3UTR CAA 90 bp ATCAATGACTCTAATAAACCCGCCCATAAATACCTGAAGGCAGGTTTTGGTTTTGAAGGGTCTGGCACCTaGTCCACCGATGCAAACACG +
Preference number: 5 (lower is better)
Translates to: INDSNKPAHKYLKAGFGFEGSGT*STDANT
Trigger: CGTGTTTGCATCGGTGGACAAGGTGCCAGACCCTTC...AAAACCAAAACCTGCCTTCAGGTATTTATGGGCGGGTTTATTAGAGTCATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000459723.1
CDS-3UTR CAA 90 bp GTTTATCTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATATGGGGGCATCTGAATaGACTGTGCGTGAGGTGCCG +
Preference number: 5 (lower is better)
Translates to: VYLSLLFYKFLRTVTWSNMGASE*TVREVP
Trigger: CGGCACCTCACGCACAGTCAATTCAGATGCCCCCAT...ATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAGATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261657.5
CDS-3UTR CAA 90 bp GCCAAGTTTAAATTTACAAGGAAGTTCCAGTTTTCATTTCCACCCTCGTGTTCACACCTGCCCCTTAGGTaGCTTGTGAACGCAAGTGTC +
Preference number: 5 (lower is better)
Translates to: AKFKFTRKFQFSFPPSCSHLPLR*LVNASV
Trigger: GACACTTGCGTTCACAAGCAACCTAAGGGGCAGGTG...TGAACACGAGGGTGGAAATGAAAACTGGAACTTCCTTGTAAATTTAAACTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261657.5
ENST00000409790.6
CDS-3UTR CAA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTCAGTGAGCACATCGTaGAGGAACTCACAGTTGATG +
Preference number: 5 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSSVSTS*RNSQLM
Trigger: CATCAACTGTGAGTTCCTCAACGATGTGCTCACTGA...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGTAGTTGGGTCTCTTTaGCACCCGCCTCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHVVGSL*HPPLAL
Trigger: AAGGGCAAGAGGCGGGTGCAAAAGAGACCCAACTAC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTTCTGGCTGGGCAGCGTaGTTCATGATCCTGATGAGT +
Preference number: 5 (lower is better)
Translates to: RSGPFHSDKSAMDFPFKFSGWAA*FMILMS
Trigger: ACTCATCAGGATCATGAACAACGCTGCCCAGCCAGA...AAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS TCA 90 bp AACATATTCTTCTCCAGGAAGAAGTCAAATACAGAGCTGTCATTTTaGTCTCCCCAGATCAGGATCTCAGTGATGGAACGGATGGTCTCC +
Preference number: 5 (lower is better)
Translates to: NIFFSRKKSNTELSF*SPQIRISVMERMVS
Trigger: GGAGACCATCCGTTCCATCACTGAGATCCTGATCTGGGGAGATCAAAATGACAGCTCTGTATTTGACTTCTTCCTGGAGAAGAATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409552.4
ENST00000409790.6
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATAGCACTCATCAGGACTaGCTGCTTCAGAAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHSTHQD*LLQKQA
Trigger: TGCCTGCTTCTGAAGCAGCAAGTCCTGATGAGTGCT...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATAGGACATCATCAGTCTaGATCAGGTCCTCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHRTSSV*IRSSSR
Trigger: TCGGGAGGAGGACCTGATCAAGACTGATGATGTCCT...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATACCATGCCGCCATCCTaGGTGATCACTGTACATGCA +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHTMPPS*VITVHA
Trigger: TGCATGTACAGTGATCACCAAGGATGGCGGCATGGT...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTATGCTTTCAGGGTGGTaGAAAAACTTGATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSMLSGW*KNLMAS
Trigger: AGAAGCCATCAAGTTTTTCAACCACCCTGAAAGCAT...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTAATAGGCCTGCAAACTaGACCACTCCCCAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVNRPAN*TTPQPS
Trigger: GCTTGGCTGGGGAGTGGTCAAGTTTGCAGGCCTATT...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp GGAGAAGTGGTCCTTTCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTATCTTGCGCTGTGCTTaGACAAATTCTAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: GEVVLSTLTNQQWTFHSSILRCA*TNSKKL
Trigger: CAGCTTCTTAGAATTTGTCAAAGCACAGCGCAAGAT...ACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGAAAGGACCACTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS GCA 90 bp CCACACTTCTGTTTCTACAATACACACCATGCTGCTGTCCATCTGTaGTCTGCCAATTACCTTATAAAAATGTCGTACAAGGTGAACACT +
Preference number: 5 (lower is better)
Translates to: PHFCFYNTHHAAVHL*SANYLIKMSYKVNT
Trigger: AGTGTTCACCTTGTACGACATTTTTATAAGGTAATTGGCAGAGCACAGATGGACAGCAGCATGGTGTGTATTGTAGAAACAGAAGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487189.5
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATGGGTGGTTGAAAAACTaGATGGCTTCTGTGTACAGG +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHGWLKN*MASVYR
Trigger: CCTGTACACAGAAGCCATCAAGTTTTTCAACCACCC...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp TCCACTCTGACAAATCAGCAATGGACTTTCCATTCAAGTTTCTGTTTTGGGAGGTTGAGGAACTCACAGTaGATGATCAGGATGTCATTG +
Preference number: 5 (lower is better)
Translates to: STLTNQQWTFHSSFCFGRLRNSQ*MIRMSL
Trigger: CAATGACATCCTGATCATCAACTGTGAGTTCCTCAA...CCTCCCAAAACAGAAACTTGAATGGAAAGTCCATTGCTGATTTGTCAGAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp ACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTTAAATGTTTTTTGCACCCGCCTCTaGCCCTTGTGCTTGTTCATC +
Preference number: 5 (lower is better)
Translates to: TWRRKLLSHNFSTNHLNVFCTRL*PLCLFI
Trigger: GATGAACAAGCACAAGGGCAAGAGGCGGGTGCAAAA...AACATTTAAATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp AGTCATCTTACATGGAGAAGGAAATTACTCTCCCACAACTTCAGCACTAATCATTACAGAGCTGTCATTTaGATCTCCCCAGATCAGGAT +
Preference number: 5 (lower is better)
Translates to: SHLTWRRKLLSHNFSTNHYRAVI*ISPDQD
Trigger: ATCCTGATCTGGGGAGATCAAAATGACAGCTCTGTA...ATGATTAGTGCTGAAGTTGTGGGAGAGTAATTTCCTTCTCCATGTAAGATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409552.4
CDS-3UTR CAA 90 bp CTAAGTCTGCTTTTCTACAAATTTCTACGTACAGTGACCTGGTCCAATTCTTCTCGTTCATGGGCTTCATaGTCATGCTCCTATACTCAT +
Preference number: 5 (lower is better)
Translates to: LSLLFYKFLRTVTWSNSSRSWAS*SCSYTH
Trigger: ATGAGTATAGGAGCATGACAATGAAGCCCATGAACG...AGAAGAATTGGACCAGGTCACTGTACGTAGAAATTTGTAGAAAAGCAGACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409790.6
CDS GCA 90 bp CTTCTGTTTCTACAATACACACCATGCTGCTGTCCATCTGTGCTCTaGCAATTACCTTATAAAAATGTCGTACAAGGTGAACACTTTCTT +
Preference number: 5 (lower is better)
Translates to: LLFLQYTPCCCPSVL*QLPYKNVVQGEHFL
Trigger: AAGAAAGTGTTCACCTTGTACGACATTTTTATAAGGTAATTGGCAGAGCACAGATGGACAGCAGCAT