RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLEC10A (Homo sapiens)

Ensembl gene IDs: ENSG00000132514

Ensembl transcript IDs: ENST00000254868.8, ENST00000416562.7, ENST00000571624.1, ENST00000571664.1, ENST00000576549.6, ENST00000576617.5

Found 318 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATaGGGGGACTGGTGGGGGCGATGGCAATGTTATCTATTGCGATCG +
Preference number: 1 (lower is better)
Translates to: ITGLETGKWLDCPEA*GDWWGRWQCYLLRS
Trigger: CGATCGCAATAGATAACATTGCCATCGCCCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
3UTR GCA 90 bp AGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTG +
Preference number: 1 (lower is better)
Translates to: SASNLPVLISLPERS*EEVVRRVLLPPPFL
Trigger: CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR CCA 90 bp CCAGTTCCTGAGAGGAAAAGACAACAGCAAGCTAGGAAGGGTAGATaGAGTAGAATTCAGTTCAGGGGAGGAGAGGCTGCCAGTCAGATC +
Preference number: 1 (lower is better)
Translates to: PVPERKRQQQARKGR*SRIQFRGGEAASQI
Trigger: GATCTGACTGGCAGCCTCTCCTCCCCTGAACTGAATTCTACTCCATCTACCCTTCCTAGCTTGCTGTTGTCTTTTCCTCTCAGGAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR TCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCTCTCCTGGCTGGTCTaGCCCAGGCCAGCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: SNLPVLISLPERSCEEVVLSWLV*PRPASQ
Trigger: CTGCGAGGCTGGCCTGGGTCAGACCAGCCAGGAGAG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR TCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCTTGCGAGGAGGTCGTaGGAAGAGTCCTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: SNLPVLISLPERSCEEVVLARRS*EESSSH
Trigger: GTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 2 (lower is better)
Translates to: SNLPVLISLPERSCEEVVPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR CCA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 2 (lower is better)
Translates to: VLPISQCLFLSQSGLARRPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR TCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGCCGTCTGGATGGAAGTaGGCACAGTCCTCGCCTCCA +
Preference number: 2 (lower is better)
Translates to: SSASNLPVLISLPERSCEPSGWK*AQSSPP
Trigger: TGGAGGCGAGGACTGTGCTCACTTCCATCCAGACGG...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR GCA 90 bp GAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGA +
Preference number: 2 (lower is better)
Translates to: EVDHWPGNREVVGLPRGMLPERS*EEVVRR
Trigger: TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG...CATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
3UTR-3UTR CCA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 2 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR CCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGACCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 2 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR CAA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCT +
Preference number: 2 (lower is better)
Translates to: QCFQSPSAYFSPRAV*RGGREKSPPPTAIS
Trigger: AGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR GCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGCACAGAAAGCCAGGGTaGACTCACTGGAAGCCGGTC +
Preference number: 2 (lower is better)
Translates to: SSASNLPVLISLPERSCEHRKPG*THWKPV
Trigger: GACCGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTG...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR GCA 90 bp GAAAGCCAGGGTGCACTCACTGGAAGCCGGTCGCATAGTCTGTTCCATCCACCCCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: ESQGALTGSRSHSLFHPPLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...GGGTGGATGGAACAGACTATGCGACCGGCTTCCAGTGAGTGCACCCTGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR CCA 90 bp GCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCATTCCACCTGCCGTCTaGATGGAAGTGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: ASNLPVLISLPERSCEEVIPPAV*MEVSTV
Trigger: GACTGTGCTCACTTCCATCCAGACGGCAGGTGGAAT...GACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR CCA 90 bp GAGAGGCTGCCAGTCAGATCCCTGGGGGAAACGCTGACGGAGGACATTGGCACAGAGCCTAGATATTTCTaGACAAAATTCTGCGGTGAC +
Preference number: 2 (lower is better)
Translates to: ERLPVRSLGETLTEDIGTEPRYF*TKFCGD
Trigger: GTCACCGCAGAATTTTGTCCAGAAATATCTAGGCTC...TGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACTGGCAGCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR GCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: SNLPVLISLPERSCEEVVLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR GCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGTTCTGGACAAAATTCTaGGGTGACAGAAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: SNLPVLISLPERSCEEVVFWTKF*GDRRAV
Trigger: CACTGCCCTTCTGTCACCGCAGAATTTTGTCCAGAA...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR CCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGAGTAGATCACTGGCCTaGAAACAGGGAAGTGGTTGG +
Preference number: 2 (lower is better)
Translates to: SSASNLPVLISLPERSCESRSLA*KQGSGW
Trigger: CCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACT...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
3UTR-3UTR TCA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCTTGCGAGGAGGTCGTaGGAAGAGTCCTCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: IQNVSSASNLPVLISLPELARRS*EESSSH
Trigger: GTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAG...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR CCA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 2 (lower is better)
Translates to: IQNVSSASNLPVLISLPEPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR GCA 90 bp CTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGACTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: LEEARPINSEKEVDHWPGLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...TCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
3UTR TCA 72 bp AGGAGAGGCTGCCAGTCAGATCCCTGGGGGAAACGCTaGCGGAGGACATTGGCACAGAAAGCCAGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: RRGCQSDPWGKR*RRTLAQKARVH
Trigger: GTGCACCCTGGCTTTCTGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACTGGCAGCCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR CCA 72 bp AGAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTaGACTGCCCAGAGGCATGAGGGGACTGGTGGGGGC +
Preference number: 3 (lower is better)
Translates to: RSRSLAWKQGSG*TAQRHEGTGGG
Trigger: GCCCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
3UTR CCA 72 bp AGTCAGATCCCTGGGGGAAACGCTGACGGAGGACATTaGCACAGAAAGCCAGGGTGCACTCACTGGAAGCCG +
Preference number: 3 (lower is better)
Translates to: SQIPGGNADGGH*HRKPGCTHWKP
Trigger: CGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR-3UTR CAA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: SSASNLPVLISLPERSCESPRAV*RGGREK
Trigger: CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR TCA 72 bp TTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTaGGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: LFLSQSGLARRS*EESSSHRHFCG
Trigger: GCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR GCA 72 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCG +
Preference number: 3 (lower is better)
Translates to: NLPVLISLPERS*EEVVRRVLLPP
Trigger: CGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR-3UTR CAA 90 bp CTAGAAGCTCTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAG +
Preference number: 3 (lower is better)
Translates to: LEALEEARPINSEKEVDHSPRAV*RGGREK
Trigger: CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA...GTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAGAGCTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
3UTR GCA 72 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGG +
Preference number: 3 (lower is better)
Translates to: KFKMLAVLPISQ*LFLSQSGLARR
Trigger: CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
3UTR TCA 72 bp GAAGTATATACACGAGAGTGTATGATTTCACTTATATaGAGTTCTAGAAGCTCTAGAAGAGGCAAGGCCAAT +
Preference number: 3 (lower is better)
Translates to: EVYTRECMISLI*SSRSSRRGKAN
Trigger: ATTGGCCTTGCCTCTTCTAGAGCTTCTAGAACTTCATATAAGTGAAATCATACACTCTCGTGTATATACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCCCCAGCCCGTGCCCCTaGCAGTCGTCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTAPSPCP*QSSGWP
Trigger: AGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGG...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCACTCTCCTGGCTGGTCTaGCCCAGGCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPLSWLV*PRPASQ
Trigger: CTGCGAGGCTGGCCTGGGTCAGACCAGCCAGGAGAG...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGCCTCCACCCAGCCCGTaGCCCTGCCAGTCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLPPPSP*PCQSSG
Trigger: GCCAGACGACTGGCAGGGGCACGGGCTGGGTGGAGG...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CCAGTCAGATCCCTGGGGGAAACGCTGACGGAGGACATTGGCACAGAAAGCCAGCCCAGCCCGTGCCCCTaGCAGTCGTCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVRSLGETLTEDIGTESQPSPCP*QSSGWP
Trigger: AGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGG...CTGGCTTTCTGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCAGGGAGCGCTGTGTCCTaGAGAGCTGGGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPGSAVS*RAGVEV
Trigger: CACCTCTACCCCAGCTCTCCAGGACACAGCGCTCCC...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTGGCCGGCGCCCAGTCTaGGGTGGAGCTGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SLAWKQGSGWTAQRHEGTGRRPV*GGAVGG
Trigger: ACCTCCCACAGCTCCACCCCAGACTGGGCGCCGGCC...AGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp CCCACCGCCATTTCTGTGGCCGGGTGGTCCCACCAAAGGCAGCTCAGTGACTCTCCCTGGGGGAAACGCTaGCGGAGGACATTGGCACAG +
Preference number: 4 (lower is better)
Translates to: PTAISVAGWSHQRQLSDSPWGKR*RRTLAQ
Trigger: CTGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGG...AGAGTCACTGAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCACCCAGCCCGTGCCCCTGCCAGTCGTCTGGCTGGCCTGGCTTCCAGTTCCTGGGAAGTCAGTGCCTaGATCTCCGCCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LHPARAPASRLAGLASSSWEVSA*ISATVF
Trigger: AAACACTGTGGCGGAGATCCAGGCACTGACTTCCCA...GGAACTGGAAGCCAGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCGTCGTCTGGCTGGCCTaGCTTCCAGTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTAVVWLA*LPVLEA
Trigger: GGCTTCCAGAACTGGAAGCCAGGCCAGCCAGACGAC...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS-3UTR CCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCTGCCAGTCGTCTGGCTaGCCTGGCTTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTACQSSG*PGFQFW
Trigger: CCAGAACTGGAAGCCAGGCCAGCCAGACGACTGGCA...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS-3UTR CCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTAPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp CCGCCATTTCTGTGGCCGGGTGGTCCCACCAAAGGCAGCTCAGTGACTCTCCTGCCGTCTGGATGGAAGTaGGCACAGTCCTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PPFLWPGGPTKGSSVTLLPSGWK*AQSSPP
Trigger: TGGAGGCGAGGACTGTGCTCACTTCCATCCAGACGG...CAGGAGAGTCACTGAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAATGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTGGTGGGGGCCCTGGGAAGTCAGTaGCTGGATCTCCGCCACAGT +
Preference number: 4 (lower is better)
Translates to: PGNREVVGLPRGMRGLVGALGSQ*LDLRHS
Trigger: ACTGTGGCGGAGATCCAGGCACTGACTTCCCAGGGC...CCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp CCCACCGCCATTTCTGTGGCCGGGTGGTCCCACCAAAGGCAGCTCAGTGACTCTGCCCTGGGAAGTCAGTaGCTGGATCTCCGCCACAGT +
Preference number: 4 (lower is better)
Translates to: PTAISVAGWSHQRQLSDSALGSQ*LDLRHS
Trigger: ACTGTGGCGGAGATCCAGGCACTGACTTCCCAGGGC...AGAGTCACTGAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR GCA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGCCCAGCCCGTGCCCCTaGCAGTCGTCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLPISQCLFLSQSGLARRPSPCP*QSSGWP
Trigger: AGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGG...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCCTCCACCCAGCCCGTaGCCCTGCCAGTCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVPPPSP*PCQSSG
Trigger: GCCAGACGACTGGCAGGGGCACGGGCTGGGTGGAGG...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGACCTCCACCCAGCCCGTaGCCCTGCCAGTCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRPPPSP*PCQSSG
Trigger: GCCAGACGACTGGCAGGGGCACGGGCTGGGTGGAGG...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGGGTaGTCCCACCAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTAISVAG*SHQRQL
Trigger: GAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAAT...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCAATTTCTGTGGCCGGGTaGTCCCACCAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPISVAG*SHQRQL
Trigger: GAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAAT...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGCCGTCTGGATGGAAGTaGGCACAGTCCTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPPSGWK*AQSSPP
Trigger: TGGAGGCGAGGACTGTGCTCACTTCCATCCAGACGG...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGCTCTCCTGGCTGGTCTaGCCCAGGCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARLSWLV*PRPASQ
Trigger: CTGCGAGGCTGGCCTGGGTCAGACCAGCCAGGAGAG...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp TCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGCTCTCCTGGCTGGTCTaGCCCAGGCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SPSAYFSPRAVLRGGREKLSWLV*PRPASQ
Trigger: CTGCGAGGCTGGCCTGGGTCAGACCAGCCAGGAGAG...CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGGCCCTGGGAAGTCAGTaGCTGGATCTCCGCCACAGT +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPALGSQ*LDLRHS
Trigger: ACTGTGGCGGAGATCCAGGCACTGACTTCCCAGGGC...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCAGGTCTTGCACCAGCTaGTGGACTCGCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTARSCTS*WTRRSI
Trigger: AATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCT...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCCGTCGTCATTCCACCTaGCGTCTGGATGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTARRHST*RLDGSE
Trigger: CTCACTTCCATCCAGACGGCAGGTGGAATGACGACG...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp CCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTGGTGGGGCGTCCTTGTCATGCTTaGGCCAACACGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PGNREVVGLPRGMRGLVGRPCHA*ANTALR
Trigger: CCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACG...CCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCTGCGTAGTGTGTTCCTaGAGCTCAGATACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SPRAVLRGGREKSPPPTACVVCS*SSDTPA
Trigger: GGCAGGGGTATCTGAGCTCCAGGAACACACTACGCA...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR TCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGCCTGCCGTTCCTGCTTaGAACCCTCCACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLPAVPA*NPPPQL
Trigger: AAGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGG...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp TCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTCCGTCTGGATGGAAGTaGGCACAGTCCTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLAWKQGSGWTAQRHEGTPSGWK*AQSSPP
Trigger: TGGAGGCGAGGACTGTGCTCACTTCCATCCAGACGG...AGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGACTCTCCTGGCTGGTCTaGCCCAGGCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGLSWLV*PRPASQ
Trigger: CTGCGAGGCTGGCCTGGGTCAGACCAGCCAGGAGAG...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTGGTGGGGAGGTCTTGCACCAGCTaGTGGACTCGCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: PGNREVVGLPRGMRGLVGRSCTS*WTRRSI
Trigger: AATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCT...CCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLLPERS*EEVVRR
Trigger: TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp GAGAGGCTGCCAGTCAGATCCCTGGGGGAAACGCTGACGGAGGACATTGGCACACCAGAAGCCCTCACCTaGTCCTCCCTGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: ERLPVRSLGETLTEDIGTPEALT*SSLELM
Trigger: CATCAACTCCAGGGAGGAGCAGGTGAGGGCTTCTGG...TGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACTGGCAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGGACGTCACTCAGAGTTaGGAGCGCTGTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLDVTQS*ERCVLE
Trigger: CTCCAGGACACAGCGCTCCCAACTCTGAGTGACGTC...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGCGTCCTTGTCATGCTTaGGCCAACACGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLRPCHA*ANTALR
Trigger: CCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACG...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGTGCTGGTCTTGGGTCTaGAATCCCAGGAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPCWSWV*NPRSPI
Trigger: GATAGGGCTCCTGGGATTTCAGACCCAAGACCAGCA...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCCCGTCTGGATGGAAGTaGGCACAGTCCTCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPPSGWK*AQSSPP
Trigger: TGGAGGCGAGGACTGTGCTCACTTCCATCCAGACGG...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGAGGTCTTGCACCAGCTaGTGGACTCGCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPRSCTS*WTRRSI
Trigger: AATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCT...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGACTGCCTGCCGTTCCTaGTTGAAACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLTACRS*LKPSTS
Trigger: TGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGCAGT...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTGGGAGCGCTGTGTCCTaGAGAGCTGGGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPGSAVS*RAGVEV
Trigger: CACCTCTACCCCAGCTCTCCAGGACACAGCGCTCCC...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGGGCAGTGGGGACAGTaGCCTAGGTGTGCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRGQWGQ*PRCAFC
Trigger: GCAGAAGGCACACCTAGGCCACTGTCCCCACTGCCC...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR TCA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGCTTGCGAGGAGGTCGTaGGAAGAGTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: VLPISQCLFLSQSGLARRLARRS*EESSSH
Trigger: GTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAG...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGAGGAGCATTTCAGAATaGACTGCCTGCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPRSISE*TACRSC
Trigger: GCAGGAACGGCAGGCAGTTCATTCTGAAATGCTCCT...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGAGGAGCATTTCAGAATaGACTGCCTGCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLRSISE*TACRSC
Trigger: GCAGGAACGGCAGGCAGTTCATTCTGAAATGCTCCT...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp CCGCCATTTCTGTGGCCGGGTGGTCCCACCAAAGGCAGCTCAGTGACTCTCCTGACATGTCTTAGGAACTaGGTACCAGAAGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PPFLWPGGPTKGSSVTLLTCLRN*VPEALT
Trigger: GGTGAGGGCTTCTGGTACTCAGTTCCTAAGACATGT...CAGGAGAGTCACTGAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR GCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGCCCTGGGAAGTCAGTaGCTGGATCTCCGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRALGSQ*LDLRHS
Trigger: ACTGTGGCGGAGATCCAGGCACTGACTTCCCAGGGC...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTCCTCCACCCAGCCCGTaGCCCTGCCAGTCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLPPPSP*PCQSSG
Trigger: GCCAGACGACTGGCAGGGGCACGGGCTGGGTGGAGG...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPLPERS*EEVVRR
Trigger: TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCACTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGGCCGGCGCCCAGTCTaGGGTGGAGCTGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLGRRPV*GGAVGG
Trigger: ACCTCCCACAGCTCCACCCCAGACTGGGCGCCGGCC...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCTTGTCACAGCTGAAATaGAGGCAGGGCCGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVLSQLK*RQGRRP
Trigger: TGGGCGCCGGCCCTGCCTCCATTTCAGCTGTGACAA...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTTGTCACAGCTGAAATaGAGGCAGGGCCGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARLSQLK*RQGRRP
Trigger: TGGGCGCCGGCCCTGCCTCCATTTCAGCTGTGACAA...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCCGTCCTTGTCATGCTTaGGCCAACACGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPRPCHA*ANTALR
Trigger: CCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACG...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCTGGGACACACACAGATaGGCAGTGGGGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVWDTHR*AVGTVA
Trigger: GGCCACTGTCCCCACTGCCCATCTGTGTGTGTCCCA...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR CCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTCTTGCACCAGCTGCTaGACTCGCAGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLSCTSC*TRRSIS
Trigger: TGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGA...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTGTCGTCTGGCTGGCCTaGCTTCCAGTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPVVWLA*LPVLEA
Trigger: GGCTTCCAGAACTGGAAGCCAGGCCAGCCAGACGAC...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS-3UTR CCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGCCTGCCGTTCCTGCTTaGAACCCTCCACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREPAVPA*NPPPQL
Trigger: AAGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGG...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp CCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCTCCTTCAGGGTCACTaGGGCCCATCCAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: PSAYFSPRAVLRGGREKSLLQGH*GPSRCM
Trigger: CATACACCTGGATGGGCCTCAGTGACCCTGAAGGAG...ACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCTCCTTCAGGGTCACTaGGGCCCATCCAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVLLQGH*GPSRCM
Trigger: CATACACCTGGATGGGCCTCAGTGACCCTGAAGGAG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGACTTGCGAGGAGGTCGTaGGAAGAGTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: NLPVLISLPERSCEEVVRLARRS*EESSSH
Trigger: GTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAG...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp GATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGAAGGAGCATTTCAGAATaGACTGCCTGCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: DHWPGNREVVGLPRGMRGRSISE*TACRSC
Trigger: GCAGGAACGGCAGGCAGTTCATTCTGAAATGCTCCT...TCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416562.7
CDS-3UTR GCA 90 bp CCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCACGTTGGTTGTGCTaGAAGGACCAGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PSAYFSPRAVLRGGREKSPRWLC*KDQRWD
Trigger: GTCCCACCTCTGGTCCTTGCAGCACAACCAACGTGG...ACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp TCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGCCTGCCTGCCGTTCCTaGTTGAAACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: SPSAYFSPRAVLRGGREKPACRS*LKPSTS
Trigger: TGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGCAGG...CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR GCA 90 bp GCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: ASNLPVLISLPERSCEEVLPERS*EEVVRR
Trigger: TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG...GACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVLPERS*EEVVRR
Trigger: TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGACACAGAAAGCCAGGGTaGACTCACTGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRHRKPG*THWKPV
Trigger: GACCGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTG...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp GAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGTGGGGTAGAGGTGACTaGAGTCCTGCTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EVDHWPGNREVVGLPRGMWGRGD*SPAGLG
Trigger: CCCAAGACCAGCAGGACTCCAGTCACCTCTACCCCA...CATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGTGGGGTAGAGGTGACTaGAGTCCTGCTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREWGRGD*SPAGLG
Trigger: CCCAAGACCAGCAGGACTCCAGTCACCTCTACCCCA...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGTGGGGTAGAGGTGACTaGAGTCCTGCTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPSAYFSPRAVLRGGREKWGRGD*SPAGLG
Trigger: CCCAAGACCAGCAGGACTCCAGTCACCTCTACCCCA...CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGGACGTCACTCAGAGTTaGGAGCGCTGTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EVDHWPGNREVVGLPRGMDVTQS*ERCVLE
Trigger: CTCCAGGACACAGCGCTCCCAACTCTGAGTGACGTC...CATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp GGCACAGAAAGCCAGGGTGCACTCACTGGAAGCCGGTCGCATAGTCTGTTCCATTGCAAGGACCAGAGGTaGGACGTCACTCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GTESQGALTGSRSHSLFHCKDQR*DVTQSW
Trigger: CCAACTCTGAGTGACGTCCCACCTCTGGTCCTTGCA...ATGGAACAGACTATGCGACCGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCGTCCTTGTCATGCTTaGGCCAACACGGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVRPCHA*ANTALR
Trigger: CCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCTCCAAGCTGCTGCCCTaGGAAGTCAGTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: ASNLPVLISLPERSCEEVSKLLP*EVSAWI
Trigger: GATCCAGGCACTGACTTCCCAGGGCAGCAGCTTGGA...GACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGTCCAAGCTGCTGCCCTaGGAAGTCAGTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVSKLLP*EVSAWI
Trigger: GATCCAGGCACTGACTTCCCAGGGCAGCAGCTTGGA...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCACACAGATGGGCAGTaGGGACAGTGGCCTAGGTGT +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVHTDGQ*GQWPRC
Trigger: ACACCTAGGCCACTGTCCCCACTGCCCATCTGTGTG...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR CCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGTTGAGAGTAGCCACCTaGCAGGTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPLRVAT*QVSFFR
Trigger: CCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAA...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTTGAGAGTAGCCACCTaGCAGGTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLLRVAT*QVSFFR
Trigger: CCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAA...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCATTTCTGTGGCCGGGTaGTCCCACCAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ASNLPVLISLPERSCEEVISVAG*SHQRQL
Trigger: GAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAAT...GACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGATTTCTGTGGCCGGGTaGTCCCACCAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLPISQCLFLSQSGLARRISVAG*SHQRQL
Trigger: GAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAAT...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGATTTCTGTGGCCGGGTaGTCCCACCAAAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVISVAG*SHQRQL
Trigger: GAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAAT...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGAGTAGATCACTGGCCTaGAAACAGGGAAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPSRSLA*KQGSGW
Trigger: CCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACT...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTGTCGTCTGGCTGGCCTaGCTTCCAGTTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGVVWLA*LPVPAP
Trigger: AGGAGCAGGAACTGGAAGCCAGGCCAGCCAGACGAC...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576549.6
CDS-3UTR CCA 90 bp TCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGGCTGACGGAGGACATTaGCACAGAAAGCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SPSAYFSPRAVLRGGREKADGGH*HRKPGC
Trigger: GCACCCTGGCTTTCTGTGCCAATGTCCTCCGTCAGC...CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGTCGTCTGGCTGGCCTaGCTTCCAGTTCCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGVVWLA*LPVPER
Trigger: CCTCTCAGGAACTGGAAGCCAGGCCAGCCAGACGAC...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
3UTR CAA 72 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAV*RGGREKSPPPT
Trigger: GGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTGCTGGTCTTGGGTCTaGAATCCCAGGAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARCWSWV*NPRSPI
Trigger: GATAGGGCTCCTGGGATTTCAGACCCAAGACCAGCA...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTGAGGTCTGGAGGGTGTaGTTCCCACGTTGGTTGTGC +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGEVWRV*FPRWLC
Trigger: GCACAACCAACGTGGGAATCACACCCTCCAGACCTC...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTCCTGCCGTTCCTGCTTaGAACCCTCCACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRPAVPA*NPPPQL
Trigger: AAGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGG...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGACCTGCCGTTCCTGCTTaGAACCCTCCACCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NLPVLISLPERSCEEVVRPAVPA*NPPPQL
Trigger: AAGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGG...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCTCCTTCAGGGTCACTaGGGCCCATCCAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGLLQGH*GPSRCM
Trigger: CATACACCTGGATGGGCCTCAGTGACCCTGAAGGAG...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGACCACGTTGGTTGTGCTaGAAGGACCAGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGPRWLC*KDQRWD
Trigger: GTCCCACCTCTGGTCCTTGCAGCACAACCAACGTGG...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTCCACGTTGGTTGTGCTaGAAGGACCAGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRPRWLC*KDQRWD
Trigger: GTCCCACCTCTGGTCCTTGCAGCACAACCAACGTGG...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCTCGTTTCTTCCAAGCTaGTGCCCTGGGAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPSFLPS*CPGKSV
Trigger: CACTGACTTCCCAGGGCAGCAGCTTGGAAGAAACGA...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp AGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGAGGTCTTGCACCAGCTaGTGGACTCGCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SRSLAWKQGSGWTAQRHERSCTS*WTRRSI
Trigger: AATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCT...CTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGCGTCGTCATTCCACCTaGCGTCTGGATGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAVLRGGRERRHST*RLDGSE
Trigger: CTCACTTCCATCCAGACGGCAGGTGGAATGACGACG...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTACTGCCTGCCGTTCCTaGTTGAAACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPTACRS*LKPSTS
Trigger: TGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGCAGT...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCCACAGAGACCATGTGTaGGTGGGGAGAGTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPHRDHV*VGRVGF
Trigger: AAACCCAACTCTCCCCACCCACACATGGTCTCTGTG...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR CCA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTTGGGGTAGAGGTGACTaGAGTCCTGCTGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRWGRGD*SPAGLG
Trigger: CCCAAGACCAGCAGGACTCCAGTCACCTCTACCCCA...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTGCAAGGACCAGAGGTaGGACGTCACTCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARCKDQR*DVTQSW
Trigger: CCAACTCTGAGTGACGTCCCACCTCTGGTCCTTGCA...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGTGCAAGGACCAGAGGTaGGACGTCACTCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SPSAYFSPRAVLRGGREKCKDQR*DVTQSW
Trigger: CCAACTCTGAGTGACGTCCCACCTCTGGTCCTTGCA...CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGGGCCGGCGCCCAGTCTaGGGTGGAGCTGTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: EARPINSEKEVDHWPGNRGRRPV*GGAVGG
Trigger: ACCTCCCACAGCTCCACCCCAGACTGGGCGCCGGCC...CCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGATCCAAGCTGCTGCCCTaGGAAGTCAGTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGSKLLP*EVSAWI
Trigger: GATCCAGGCACTGACTTCCCAGGGCAGCAGCTTGGA...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTTCCAAGCTGCTGCCCTaGGAAGTCAGTGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGSKLLP*EVSAWI
Trigger: GATCCAGGCACTGACTTCCCAGGGCAGCAGCTTGGA...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGATTGAGAGTAGCCACCTaGCAGGTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DHWPGNREVVGLPRGMRGLRVAT*QVSFFR
Trigger: CCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAA...TCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGCTGGAAACAGGGAAGTaGTTGGACTGCCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VLPISQCLFLSQSGLARRLETGK*LDCPEA
Trigger: TGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAG...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGTGCTGGTCTTGGGTCTaGAATCCCAGGAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: SSASNLPVLISLPERSCECWSWV*NPRSPI
Trigger: GATAGGGCTCCTGGGATTTCAGACCCAAGACCAGCA...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp GAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGCTCTCCTGGCTGGTCTaGCCCAGGCCAGCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: EARPINSEKEVDHWPGNRLSWLV*PRPASQ
Trigger: CTGCGAGGCTGGCCTGGGTCAGACCAGCCAGGAGAG...CCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAAGGAGCATTTCAGAATaGACTGCCTGCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRRSISE*TACRSC
Trigger: GCAGGAACGGCAGGCAGTTCATTCTGAAATGCTCCT...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGGACAAAATTCTGCGGTaGCAGAAGGGCAGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREDKILR*QKGSGD
Trigger: GTCACCACTGCCCTTCTGTCACCGCAGAATTTTGTC...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR GCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGCATACGTCCTTGTCATaGTTGGGCCAACACGGCTCT +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARHTSLS*LGQHGS
Trigger: AGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATG...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGACATACGTCCTTGTCATaGTTGGGCCAACACGGCTCT +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRHTSLS*LGQHGS
Trigger: AGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATG...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp AGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGTTTCTTCCAAGCTGCTaGCCTGGGAAGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SRSLAWKQGSGWTAQRHEFLPSC*PGKSVP
Trigger: AGGCACTGACTTCCCAGGGCAGCAGCTTGGAAGAAA...CTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTTTCTTCCAAGCTGCTaGCCTGGGAAGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLPISQCLFLSQSGLARRFLPSC*PGKSVP
Trigger: AGGCACTGACTTCCCAGGGCAGCAGCTTGGAAGAAA...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTTTTCTTCCAAGCTGCTaGCCTGGGAAGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPFLPSC*PGKSVP
Trigger: AGGCACTGACTTCCCAGGGCAGCAGCTTGGAAGAAA...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTTCGTTTCTTCCAAGCTaGTGCCCTGGGAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPSFLPS*CPGKSV
Trigger: CACTGACTTCCCAGGGCAGCAGCTTGGAAGAAACGA...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGATCGTTTCTTCCAAGCTaGTGCCCTGGGAAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRSFLPS*CPGKSV
Trigger: CACTGACTTCCCAGGGCAGCAGCTTGGAAGAAACGA...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGTCAGATACCCCTGCCTaGCGTTCCTGCTTGAAACCC +
Preference number: 4 (lower is better)
Translates to: SSASNLPVLISLPERSCESDTPA*RSCLKP
Trigger: GGGTTTCAAGCAGGAACGGCAGGCAGGGGTATCTGA...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR GCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTAGGTCTTGCACCAGCTaGTGGACTCGCAGGAGCATT +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGRSCTS*WTRRSI
Trigger: AATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCT...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp AGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGGAAGTGCCCAGCCCGTGCCCCTaGCAGTCGTCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RPINSEKEVDHWPGNREVPSPCP*QSSGWP
Trigger: AGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGG...CACTTCCCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTCGTCATTCCACCTaGCGTCTGGATGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGRRHST*RLDGSE
Trigger: CTCACTTCCATCCAGACGGCAGGTGGAATGACGACG...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTGGGAAGTCAGTGCCTaGATCTCCGCCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARWEVSA*ISATVF
Trigger: AAACACTGTGGCGGAGATCCAGGCACTGACTTCCCA...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGTGGGAAGTCAGTGCCTaGATCTCCGCCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SPSAYFSPRAVLRGGREKWEVSA*ISATVF
Trigger: AAACACTGTGGCGGAGATCCAGGCACTGACTTCCCA...CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGATTCCACCTGCCGTCTaGATGGAAGTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARIPPAV*MEVSTV
Trigger: GACTGTGCTCACTTCCATCCAGACGGCAGGTGGAAT...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGATTCCACCTGCCGTCTaGATGGAAGTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREIPPAV*MEVSTV
Trigger: GACTGTGCTCACTTCCATCCAGACGGCAGGTGGAAT...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp CCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTAAACAGGGAAGTGGTTaGACTGCCCAGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PSAYFSPRAVLRGGREKSKQGSG*TAQRHE
Trigger: CTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTT...ACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTAGGGTGTGGCACAGATaGCAGTCATTCTGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGRVWHR*QSFWKL
Trigger: GAGCTTCCAGAATGACTGTCATCTGTGCCACACCCT...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR GCA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGACATACGTCCTTGTCATaGTTGGGCCAACACGGCTCT +
Preference number: 4 (lower is better)
Translates to: NLPVLISLPERSCEEVVRHTSLS*LGQHGS
Trigger: AGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATG...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp GGCACAGAAAGCCAGGGTGCACTCACTGGAAGCCGGTCGCATAGTCTGTTCCATCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GTESQGALTGSRSHSLFHLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...ATGGAACAGACTATGCGACCGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTAGGAGCCCTATCATCTaGGACATCCCATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPRSPII*DIPSPQ
Trigger: TTGAGGAGATGGGATGTCCCAGATGATAGGGCTCCT...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGGAGCCCTATCATCTaGGACATCCCATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVRSPII*DIPSPQ
Trigger: TTGAGGAGATGGGATGTCCCAGATGATAGGGCTCCT...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCAGGAGCCCTATCATCTaGGACATCCCATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVRSPII*DIPSPQ
Trigger: TTGAGGAGATGGGATGTCCCAGATGATAGGGCTCCT...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAAGGAGCCCTATCATCTaGGACATCCCATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRRSPII*DIPSPQ
Trigger: TTGAGGAGATGGGATGTCCCAGATGATAGGGCTCCT...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTTTGTCACAGCTGAAATaGAGGCAGGGCCGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLLSQLK*RQGRRP
Trigger: TGGGCGCCGGCCCTGCCTCCATTTCAGCTGTGACAA...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CCCACCGCCATTTCTGTGGCCGGGTGGTCCCACCAAAGGCAGCTCAGTGACTCTCCATTTTTAAACCCCTaGACTTTCACCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: PTAISVAGWSHQRQLSDSPFLNP*TFTLFS
Trigger: GGAGAATAAGGTGAAAGTCCAGGGGTTTAAAAATGG...AGAGTCACTGAGCTGCCTTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGTCTTGCACCAGCTGCTaGACTCGCAGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: SSASNLPVLISLPERSCESCTSC*TRRSIS
Trigger: TGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGA...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGATCTTGCACCAGCTGCTaGACTCGCAGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGSCTSC*TRRSIS
Trigger: TGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGA...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTTGAGAGTAGCCACCTaGCAGGTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARLRVAT*QVSFFR
Trigger: CCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAA...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTTGCCAGTCGTCTGGCTaGCCTGGCTTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLCQSSG*PGFQFW
Trigger: CCAGAACTGGAAGCCAGGCCAGCCAGACGACTGGCA...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS-3UTR CCA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGATTCCACCTGCCGTCTaGATGGAAGTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: SSASNLPVLISLPERSCEIPPAV*MEVSTV
Trigger: GACTGTGCTCACTTCCATCCAGACGGCAGGTGGAAT...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTATTCCACCTGCCGTCTaGATGGAAGTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRIPPAV*MEVSTV
Trigger: GACTGTGCTCACTTCCATCCAGACGGCAGGTGGAAT...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR TCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTCTCCTTCAGGGTCACTaGGGCCCATCCAGGTGTATG +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLLLQGH*GPSRCM
Trigger: CATACACCTGGATGGGCCTCAGTGACCCTGAAGGAG...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp CTAGAAGCTCTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACCCCAGCCCGTGCCCCTaGCAGTCGTCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LEALEEARPINSEKEVDHPSPCP*QSSGWP
Trigger: AGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGG...GTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAGAGCTTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp GAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: EVDHWPGNREVVGLPRGMLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...CATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGATTCTGGACAAAATTCTaGGGTGACAGAAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRFWTKF*GDRRAV
Trigger: CACTGCCCTTCTGTCACCGCAGAATTTTGTCCAGAA...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGACGTCACTCAGAGTTaGGAGCGCTGTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLDVTQS*ERCVLE
Trigger: CTCCAGGACACAGCGCTCCCAACTCTGAGTGACGTC...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTAGTAGATCACTGGCCTaGAAACAGGGAAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGSRSLA*KQGSGW
Trigger: CCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACT...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCGTCACCAGGTCCCTCTaGAATTTGGAATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPVTRSL*NLEFWN
Trigger: ATTCCAAAATTCCAAATTTCAGAGGGACCTGGTGAC...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR TCA 90 bp GGCACAGAAAGCCAGGGTGCACTCACTGGAAGCCGGTCGCATAGTCTGTTCCATGTCACCAGGTCCCTCTaGAATTTGGAATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GTESQGALTGSRSHSLFHVTRSL*NLEFWN
Trigger: ATTCCAAAATTCCAAATTTCAGAGGGACCTGGTGAC...ATGGAACAGACTATGCGACCGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR GCA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGTTCTGGACAAAATTCTaGTCCTCCCTGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREFWTKF*SSLELM
Trigger: CATCAACTCCAGGGAGGAGCAGAATTTTGTCCAGAA...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTTGCAAGGACCAGAGGTaGGACGTCACTCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLCKDQR*DVTQSW
Trigger: CCAACTCTGAGTGACGTCCCACCTCTGGTCCTTGCA...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp GGCACAGAAAGCCAGGGTGCACTCACTGGAAGCCGGTCGCATAGTCTGTTCCATGAGCCTAGATATTTCTaGACAAAATTCTGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: GTESQGALTGSRSHSLFHEPRYF*TKFCGD
Trigger: GTCACCGCAGAATTTTGTCCAGAAATATCTAGGCTC...ATGGAACAGACTATGCGACCGGCTTCCAGTGAGTGCACCCTGGCTTTCTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGGCTAGGAAGGGTAGATaGAGTAGAATTCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVARKGR*SRIQFR
Trigger: CCTGAACTGAATTCTACTCCATCTACCCTTCCTAGC...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR TCA 90 bp GAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGGTCACCAGGTCCCTCTaGAATTTGGAATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: EVDHWPGNREVVGLPRGMVTRSL*NLEFWN
Trigger: ATTCCAAAATTCCAAATTTCAGAGGGACCTGGTGAC...CATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp AGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGGAAGTGCTTGCGAGGAGGTCGTaGGAAGAGTCCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: RPINSEKEVDHWPGNREVLARRS*EESSSH
Trigger: GTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAG...CACTTCCCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTCATACGTCCTTGTCATaGTTGGGCCAACACGGCTCT +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLHTSLS*LGQHGS
Trigger: AGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATG...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGCTCAGCTTTCAGAGATaGTATCGTTTCTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: AVLPISQCLFLSQSGLARLSFQR*YRFFQA
Trigger: AGCTTGGAAGAAACGATAGCATCTCTGAAAGCTGAG...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCAGCTTTCAGAGATaGTATCGTTTCTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PVLISLPERSCEEVVRRVLSFQR*YRFFQA
Trigger: AGCTTGGAAGAAACGATAGCATCTCTGAAAGCTGAG...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGCTCAGCTTTCAGAGATaGTATCGTTTCTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVLSFQR*YRFFQA
Trigger: AGCTTGGAAGAAACGATAGCATCTCTGAAAGCTGAG...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGATTCTGGACAAAATTCTaGTCCTCCCTGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGFWTKF*SSLELM
Trigger: CATCAACTCCAGGGAGGAGCAGAATTTTGTCCAGAA...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS-3UTR GCA 90 bp AAAAGACAACAGCAAGCTAGGAAGGGTAGATGGAGTAGAATTCAGTTCAGGGGACTCCCAGAGCGGTCTTaGGAGGAGGTCGTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KRQQQARKGRWSRIQFRGLPERS*EEVVRR
Trigger: TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG...TCCCCTGAACTGAATTCTACTCCATCTACCCTTCCTAGCTTGCTGTTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGGGGAGCGCTGTGTCCTaGAGAGCTGGGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQGSAVS*RAGVEV
Trigger: CACCTCTACCCCAGCTCTCCAGGACACAGCGCTCCC...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp AAAAGACAACAGCAAGCTAGGAAGGGTAGATGGAGTAGAATTCAGTTCAGGGGAGACGTCACTCAGAGTTaGGAGCGCTGTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KRQQQARKGRWSRIQFRGDVTQS*ERCVLE
Trigger: CTCCAGGACACAGCGCTCCCAACTCTGAGTGACGTC...TCCCCTGAACTGAATTCTACTCCATCTACCCTTCCTAGCTTGCTGTTGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTTCTTGCACCAGCTGCTaGACTCGCAGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLSCTSC*TRRSIS
Trigger: TGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGA...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp AGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGGAAGTGTGCCAGTCGTCTGGCTaGCCTGGCTTCCAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RPINSEKEVDHWPGNREVCQSSG*PGFQFW
Trigger: CCAGAACTGGAAGCCAGGCCAGCCAGACGACTGGCA...CACTTCCCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTAGCAGGTCCCTTCAGTaGAGGCTTCCTCACCATTGT +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLSRSLQ*RLPHHC
Trigger: ACAATGGTGAGGAAGCCTCCACTGAAGGGACCTGCT...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571664.1
CDS-3UTR TCA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTGTCACCAGGTCCCTCTaGAATTTGGAATTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGVTRSL*NLEFWN
Trigger: ATTCCAAAATTCCAAATTTCAGAGGGACCTGGTGAC...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGACTCAGCTTTCAGAGATaGTATCGTTTCTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: NLPVLISLPERSCEEVVRLSFQR*YRFFQA
Trigger: AGCTTGGAAGAAACGATAGCATCTCTGAAAGCTGAG...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp GAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGCCATTTTTAAACCCCTaGACTTTCACCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: EVDHWPGNREVVGLPRGMPFLNP*TFTLFS
Trigger: GGAGAATAAGGTGAAAGTCCAGGGGTTTAAAAATGG...CATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGGGTCCCTCTGAAATTTaGAATTTTGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: SNLPVLISLPERSCEEVVGPSEI*NFGIQP
Trigger: TGGTTGGATTCCAAAATTCCAAATTTCAGAGGGACC...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGGTCCCTCTGAAATTTaGAATTTTGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRGPSEI*NFGIQP
Trigger: TGGTTGGATTCCAAAATTCCAAATTTCAGAGGGACC...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCCACCGCCATTTCTGTaGCCGGGTGGTCCCACCAAA +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQPPPFL*PGGPTK
Trigger: TTTGGTGGGACCACCCGGCCACAGAAATGGCGGTGG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGATTGGAGATGTTTCTCTaGATGCTCAGGCCTATTAAA +
Preference number: 4 (lower is better)
Translates to: LPVLISLPERSCEEVVRRLEMFL*MLRPIK
Trigger: TTTAATAGGCCTGAGCATCCAGAGAAACATCTCCAA...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR GCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCCACGTTGGTTGTGCTaGAAGGACCAGAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQPRWLC*KDQRWD
Trigger: GTCCCACCTCTGGTCCTTGCAGCACAACCAACGTGG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp AGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGGAAGTGTTCCCACGTTGGTTGTaGTGCAAGGACCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RPINSEKEVDHWPGNREVFPRWL*CKDQRW
Trigger: CCACCTCTGGTCCTTGCAGCACAACCAACGTGGGAA...CACTTCCCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp AGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGAAACAGGGAAGTGGAGCTCAGATACCCCTaGCTGCCGTTCCTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: RPINSEKEVDHWPGNREVELRYP*LPFLLE
Trigger: TTCAAGCAGGAACGGCAGGCAGGGGTATCTGAGCTC...CACTTCCCTGTTTCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR GCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGACTGCCTGCCGTTCCTaGTTGAAACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: IQNVSSASNLPVLISLPETACRS*LKPSTS
Trigger: TGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGCAGT...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGACCATTTTTAAACCCCTaGACTTTCACCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: NLPVLISLPERSCEEVVRPFLNP*TFTLFS
Trigger: GGAGAATAAGGTGAAAGTCCAGGGGTTTAAAAATGG...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGGTCCCTCTGAAATTTaGAATTTTGGAATCCAACCA +
Preference number: 4 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRGPSEI*NFGIQP
Trigger: TGGTTGGATTCCAAAATTCCAAATTTCAGAGGGACC...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CCA 90 bp AGTCACCTAGGCATGCATATTTGTCAAAGTCATCTCTACTCTTTAAATGAGTGCGTCGTCTGGCTGGCCTaGCTTCCAGTTCTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SHLGMHICQSHLYSLNECVVWLA*LPVLEA
Trigger: GGCTTCCAGAACTGGAAGCCAGGCCAGCCAGACGAC...GCACTCATTTAAAGAGTAGAGATGACTTTGACAAATATGCATGCCTAGGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CCA 90 bp CTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACTGGCCTGGACTGGAAACAGGGAAGTaGTTGGACTGCCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LEEARPINSEKEVDHWPGLETGK*LDCPEA
Trigger: TGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAG...TCCAGGCCAGTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR TCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGTGCTGGTCTTGGGTCTaGAATCCCAGGAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQCWSWV*NPRSPI
Trigger: GATAGGGCTCCTGGGATTTCAGACCCAAGACCAGCA...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCGTCGTCATTCCACCTaGCGTCTGGATGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQRRHST*RLDGSE
Trigger: CTCACTTCCATCCAGACGGCAGGTGGAATGACGACG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTCATTTCAGAATGAACTaGGACACACACAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLHFRMN*DTHRWA
Trigger: TGCCCATCTGTGTGTGTCCCAGTTCATTCTGAAATG...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS-3UTR CCA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGTCTTGCACCAGCTGCTaGACTCGCAGGAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: IQNVSSASNLPVLISLPESCTSC*TRRSIS
Trigger: TGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGA...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp AAAAGACAACAGCAAGCTAGGAAGGGTAGATGGAGTAGAATTCAGTTCAGGGGATTGAGAGTAGCCACCTaGCAGGTCAGTTTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KRQQQARKGRWSRIQFRGLRVAT*QVSFFR
Trigger: CCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAA...TCCCCTGAACTGAATTCTACTCCATCTACCCTTCCTAGCTTGCTGTTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CCA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGAAACAGGGAAGTGGTTaGACTGCCCAGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: IQNVSSASNLPVLISLPEKQGSG*TAQRHE
Trigger: CTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTT...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGTTTCTTCCAAGCTGCTaGCCTGGGAAGTCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQFLPSC*PGKSVP
Trigger: AGGCACTGACTTCCCAGGGCAGCAGCTTGGAAGAAA...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR GCA 90 bp CTAGAAGCTCTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACACTGCCTGCCGTTCCTaGTTGAAACCCTCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LEALEEARPINSEKEVDHTACRS*LKPSTS
Trigger: TGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGCAGT...GTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAGAGCTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416562.7
CDS-3UTR CCA 90 bp AGTCACCTAGGCATGCATATTTGTCAAAGTCATCTCTACTCTTTAAATGAGTGCTGGGAAGTCAGTGCCTaGATCTCCGCCACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SHLGMHICQSHLYSLNECWEVSA*ISATVF
Trigger: AAACACTGTGGCGGAGATCCAGGCACTGACTTCCCA...GCACTCATTTAAAGAGTAGAGATGACTTTGACAAATATGCATGCCTAGGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR GCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCTTCCAATCTCCCAGTaGTTATTTCTCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQLPISQ*LFLSQS
Trigger: GCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR GCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCTCAGCTTTCAGAGATaGTATCGTTTCTTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQLSFQR*YRFFQA
Trigger: AGCTTGGAAGAAACGATAGCATCTCTGAAAGCTGAG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CCA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCCATTTTTAAACCCCTaGACTTTCACCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQPFLNP*TFTLFS
Trigger: GGAGAATAAGGTGAAAGTCCAGGGGTTTAAAAATGG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCAGCCTGCCGTTCCTGCTaGAAACCCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPACRSC*KPSTSA
Trigger: AGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGC...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp CCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTGGTGGGGGGAGTCCTGCTGGTCTaGGGTCTGAAATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PGNREVVGLPRGMRGLVGGVLLV*GLKSQE
Trigger: CTCCTGGGATTTCAGACCCAAGACCAGCAGGACTCC...CCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp GAGAGGCTGCCAGTCAGATCCCTGGGGGAAACGCTGACGGAGGACATTGGCACAGCCTGCCGTTCCTGCTaGAAACCCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ERLPVRSLGETLTEDIGTACRSC*KPSTSA
Trigger: AGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGC...TGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACTGGCAGCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CAA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCCAGTTTCTTCAGGTCTaGCACCAGCTGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: SPRAVLRGGREKSPPPTAQFLQV*HQLLDS
Trigger: CGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTG...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp GAGAGGCTGCCAGTCAGATCCCTGGGGGAAACGCTGACGGAGGACATTGGCACAGGAGTCCTGCTGGTCTaGGGTCTGAAATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: ERLPVRSLGETLTEDIGTGVLLV*GLKSQE
Trigger: CTCCTGGGATTTCAGACCCAAGACCAGCAGGACTCC...TGTGCCAATGTCCTCCGTCAGCGTTTCCCCCAGGGATCTGACTGGCAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CAA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCAACACGGCTCTGAGGTaGTCACAGCTGAAATGGAGG +
Preference number: 5 (lower is better)
Translates to: SPRAVLRGGREKSPPPTANTALR*SQLKWR
Trigger: CCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTT...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATCAGTGGAGGCATTGTaGTTGAGAGTAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPSVEAL*LRVATW
Trigger: CCAGGTGGCTACTCTCAACAACAATGCCTCCACTGA...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp TCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGTGGCCGGGTGTGATTCCCACGTaGGTTGTGCTGCAAGGACCA +
Preference number: 5 (lower is better)
Translates to: SCEEVVRRVLLPPPFLWPGVIPT*VVLQGP
Trigger: TGGTCCTTGCAGCACAACCAACGTGGGAATCACACC...CGGCCACAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp GATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGAACGTCCTTGTCATGCTaGGGCCAACACGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: DHWPGNREVVGLPRGMRGTSLSC*GQHGSE
Trigger: CTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGT...TCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp TATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCGCCTGCCGTTCCTGCTaGAAACCCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: YFSPRAVLRGGREKSPPPACRSC*KPSTSA
Trigger: AGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGC...GGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGGGACGTCACTCAGAGTaGGGAGCGCTGTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: AVLPISQCLFLSQSGLARGRHSE*GALCPG
Trigger: TCCAGGACACAGCGCTCCCAACTCTGAGTGACGTCC...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCAAGTTTTCATACGTCCTaGTCATGCTTGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: LPERSCEEVVRRVLLPPPSFHTS*SCLGQH
Trigger: GTGTTGGCCCAAGCATGACAAGGACGTATGAAAACT...TGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGGCCTGCCGTTCCTGCTaGAAACCCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: AVLPISQCLFLSQSGLARACRSC*KPSTSA
Trigger: AGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGC...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp GAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCATTTCTGCCTTCAGTGGAGGCATaGTTGTTGAGAGTAGCCACC +
Preference number: 5 (lower is better)
Translates to: ERSCEEVVRRVLLPPPFLPSVEA*LLRVAT
Trigger: GGTGGCTACTCTCAACAACAATGCCTCCACTGAAGG...CAGAAATGGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp AGTAGATCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SRSLAWKQGSGWTAQRHESPRAV*RGGREK
Trigger: CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA...CTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGATCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: AVLPISQCLFLSQSGLARSPRAV*RGGREK
Trigger: CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp CCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PSAYFSPRAVLRGGREKSSPRAV*RGGREK
Trigger: CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA...ACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGGGAGTCCTGCTGGTCTaGGGTCTGAAATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREGVLLV*GLKSQE
Trigger: CTCCTGGGATTTCAGACCCAAGACCAGCAGGACTCC...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGGAGTCCTGCTGGTCTaGGGTCTGAAATCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LPVLISLPERSCEEVVRRGVLLV*GLKSQE
Trigger: CTCCTGGGATTTCAGACCCAAGACCAGCAGGACTCC...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp TCACTGGCCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTAACACGGCTCTGAGGTaGTCACAGCTGAAATGGAGG +
Preference number: 5 (lower is better)
Translates to: SLAWKQGSGWTAQRHEGTNTALR*SQLKWR
Trigger: CCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTT...AGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGGCCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAACGTCCTTGTCATGCTaGGGCCAACACGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LPVLISLPERSCEEVVRRTSLSC*GQHGSE
Trigger: CTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGT...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGCCTGCCGTTCCTGCTaGAAACCCTCCACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: SSASNLPVLISLPERSCEACRSC*KPSTSA
Trigger: AGCTGAGGTGGAGGGTTTCAAGCAGGAACGGCAGGC...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS CCA 90 bp CCTTCAGTGGAGGCTTCCTCACCATTGTTGTTGAGAGTAGCCACCTaGCAGGTCAGTTTCTTCAGGTCTTGCACCAGCTGCTGGACTCGC +
Preference number: 5 (lower is better)
Translates to: PSVEASSPLLLRVAT*QVSFFRSCTSCWTR
Trigger: GCGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAACAACAATGGTGAGGAAGCCTCCACTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571664.1
CDS-3UTR CAA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGGGTGTGATTCCCACGTaGGTTGTGCTGCAAGGACCA +
Preference number: 5 (lower is better)
Translates to: SNLPVLISLPERSCEEVVGVIPT*VVLQGP
Trigger: TGGTCCTTGCAGCACAACCAACGTGGGAATCACACC...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAACGTCCTTGTCATGCTaGGGCCAACACGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: NLPVLISLPERSCEEVVRTSLSC*GQHGSE
Trigger: CTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGT...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAACGTCCTTGTCATGCTaGGGCCAACACGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: QCFQSPSAYFSPRAVLRGTSLSC*GQHGSE
Trigger: CTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGT...TCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGCAGTTTCTTCAGGTCTaGCACCAGCTGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREQFLQV*HQLLDS
Trigger: CGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTG...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGGTGGAGGCATTGTTGTaGAGAGTAGCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AVLPISQCLFLSQSGLARVEALL*RVATWQ
Trigger: CTGCCAGGTGGCTACTCTCAACAACAATGCCTCCAC...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp TCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTCCCACCGCCCCTAGGCATGCATATTaGTCAAAGTCATCTCTACTC +
Preference number: 5 (lower is better)
Translates to: SPRAVLRGGREKSPPPTAPRHAY*SKSSLL
Trigger: GAGTAGAGATGACTTTGACAAATATGCATGCCTAGG...GGCGGTGGGAGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS GCA 90 bp CGTCAGAGGCTGGGGCCTGACCTCCTCAGAGTTAGGACCCACCAGTaGGCGTGGTGGAGGTACAGAAATGATAGGAGAAATCCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: RQRLGPDLLRVRTHQ*AWWRYRNDRRNPSK
Trigger: TTTAGAAGGATTTCTCCTATCATTTCTGTACCTCCACCACGCGCACTGGTGGGTCCTAACTCTGAGGAGGTCAGGCCCCAGCCTCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS-3UTR CAA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGGTGTGATTCCCACGTaGGTTGTGCTGCAAGGACCA +
Preference number: 5 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRGVIPT*VVLQGP
Trigger: TGGTCCTTGCAGCACAACCAACGTGGGAATCACACC...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTAACACGGCTCTGAGGTaGTCACAGCTGAAATGGAGG +
Preference number: 5 (lower is better)
Translates to: PSAYFSPRAVLRGGREKSNTALR*SQLKWR
Trigger: CCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTT...ACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGACAGTTTCTTCAGGTCTaGCACCAGCTGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: NLPVLISLPERSCEEVVRQFLQV*HQLLDS
Trigger: CGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTG...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGTGGAGGCATTGTTGTaGAGAGTAGCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SSASNLPVLISLPERSCEVEALL*RVATWQ
Trigger: CTGCCAGGTGGCTACTCTCAACAACAATGCCTCCAC...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTGTGGAGGCATTGTTGTaGAGAGTAGCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGVEALL*RVATWQ
Trigger: CTGCCAGGTGGCTACTCTCAACAACAATGCCTCCAC...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp GCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCCTCCTTCAGTGGAGGCATTGTaGTTGAGAGTAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: AYFSPRAVLRGGREKSPPSVEAL*LRVATW
Trigger: CCAGGTGGCTACTCTCAACAACAATGCCTCCACTGA...AGGAGGACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp GTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGCCTTCAGTGGAGGCATaGTTGTTGAGAGTAGCCACC +
Preference number: 5 (lower is better)
Translates to: VLPISQCLFLSQSGLARRPSVEA*LLRVAT
Trigger: GGTGGCTACTCTCAACAACAATGCCTCCACTGAAGG...CCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp CCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTCTCCTCACCATTGTTGTaGAGAGTAGCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PVLISLPERSCEEVVRRVSSPLL*RVATWQ
Trigger: CTGCCAGGTGGCTACTCTCAACAACAATGGTGAGGA...GACTCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571664.1
CDS-3UTR CAA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGGCTTCCTCACCATTGTaGTTGAGAGTAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: QSPSAYFSPRAVLRGGREASSPL*LRVATW
Trigger: CCAGGTGGCTACTCTCAACAACAATGGTGAGGAAGC...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571664.1
CDS-3UTR CAA 90 bp TCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGGAGGCTTCCTCACCATaGTTGTTGAGAGTAGCCACC +
Preference number: 5 (lower is better)
Translates to: SNLPVLISLPERSCEEVVEASSP*LLRVAT
Trigger: GGTGGCTACTCTCAACAACAATGGTGAGGAAGCCTC...CACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571664.1
CDS-3UTR CAA 90 bp TTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTAACACGGCTCTGAGGTaGTCACAGCTGAAATGGAGG +
Preference number: 5 (lower is better)
Translates to: FQSPSAYFSPRAVLRGGRNTALR*SQLKWR
Trigger: CCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTT...ACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGATCAGTGGAGGCATTGTaGTTGAGAGTAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: NLPVLISLPERSCEEVVRSVEAL*LRVATW
Trigger: CCAGGTGGCTACTCTCAACAACAATGCCTCCACTGA...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTTCTCCCAGAGCGGTCTaGCGAGGAGGTCGTGAGAAG +
Preference number: 5 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLSPRAV*RGGREK
Trigger: CTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGA...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAAGTTTTCATACGTCCTaGTCATGCTTGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: LPVLISLPERSCEEVVRRSFHTS*SCLGQH
Trigger: GTGTTGGCCCAAGCATGACAAGGACGTATGAAAACT...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CCTGGAAACAGGGAAGTGGTTGGACTGCCCAGAGGCATGAGGGGACTGGTGGGGCTGAAATTTGGAATTTaGGAATCCAACCACACAGAT +
Preference number: 5 (lower is better)
Translates to: PGNREVVGLPRGMRGLVGLKFGI*ESNHTD
Trigger: ATCTGTGTGGTTGGATTCCAAAATTCCAAATTTCAG...CCCCACCAGTCCCCTCATGCCTCTGGGCAGTCCAACCACTTCCCTGTTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS TCA 90 bp CTCTGGATGCTCAGGCCTATTAAATCTCTGAGGGTGTGGCACAGATaGCAGTCATTCTGGAAGCTCCCAGATGATTCCAATGTGCGGCCA +
Preference number: 5 (lower is better)
Translates to: LWMLRPIKSLRVWHR*QSFWKLPDDSNVRP
Trigger: TGGCCGCACATTGGAATCATCTGGGAGCTTCCAGAATGACTGTCATCTGTGCCACACCCTCAGAGATTTAATAGGCCTGAGCATCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS CCA 90 bp AGGCTGGGGCCTGACCTCCTCAGAGTTAGGACCCACCAGTGCGCGTaGTGGAGGTACAGAAATGATAGGAGAAATCCTTCTAAACATATA +
Preference number: 5 (lower is better)
Translates to: RLGPDLLRVRTHQCA*WRYRNDRRNPSKHI
Trigger: TATATGTTTAGAAGGATTTCTCCTATCATTTCTGTACCTCCACCACGCGCACTGGTGGGTCCTAACTCTGAGGAGGTCAGGCCCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS-3UTR CAA 90 bp AGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGAGTTTTCATACGTCCTaGTCATGCTTGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: SSASNLPVLISLPERSCESFHTS*SCLGQH
Trigger: GTGTTGGCCCAAGCATGACAAGGACGTATGAAAACT...CTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp ATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTCAGTTTCTTCAGGTCTaGCACCAGCTGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: MLAVLPISQCLFLSQSGLQFLQV*HQLLDS
Trigger: CGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTG...AAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS CCA 90 bp CTGGGGCCTGACCTCCTCAGAGTTAGGACCCACCAGTGCGCGTGGTaGAGGTACAGAAATGATAGGAGAAATCCTTCTAAACATATAAAG +
Preference number: 5 (lower is better)
Translates to: LGPDLLRVRTHQCAW*RYRNDRRNPSKHIK
Trigger: CTTTATATGTTTAGAAGGATTTCTCCTATCATTTCTGTACCTCCACCACGCGCACTGGTGGGTCCTAACTCTGAGGAGGTCAGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS-3UTR CAA 90 bp CTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAAGAGTGTTTGAGGTGAAGTaGCTAAAATCTGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: LPVLISLPERSCEEVVRRVFEVK*LKSVLR
Trigger: CCTGAGAACAGATTTTAGCAACTTCACCTCAAACAC...TCTTCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp GCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGGTGTTTGAGGTGAAGTaGCTAAAATCTGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: AVLPISQCLFLSQSGLARVFEVK*LKSVLR
Trigger: CCTGAGAACAGATTTTAGCAACTTCACCTCAAACAC...CCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS TCA 90 bp TCTGAGGGTGTGGCACAGATGACAGTCATTCTGGAAGCTCCCAGATaGTTCCAATGTGCGGCCAAGCTTAAGAACCATTTCCCTAAATGG +
Preference number: 5 (lower is better)
Translates to: SEGVAQMTVILEAPR*FQCAAKLKNHFPKW
Trigger: CCATTTAGGGAAATGGTTCTTAAGCTTGGCCGCACATTGGAATCATCTGGGAGCTTCCAGAATGACTGTCATCTGTGCCACACCCTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS TCA 90 bp GGAGTTTGGAGATGTTTCTCTGGATGCTCAGGCCTATTAAATCTCTaGGGGTGTGGCACAGATGACAGTCATTCTGGAAGCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: GVWRCFSGCSGLLNL*GCGTDDSHSGSSQM
Trigger: CATCTGGGAGCTTCCAGAATGACTGTCATCTGTGCCACACCCTCAGAGATTTAATAGGCCTGAGCATCCAGAGAAACATCTCCAAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS CCA 90 bp CTTATTCTCCAAGTACTGGAAGTTTTCATACGTCCTTGTCATGCTTaGGCCAACACGGCTCTGAGGTTGTCACAGCTGAAATGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LILQVLEVFIRPCHA*ANTALRLSQLKWRQ
Trigger: CTGCCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAACTTCCAGTACTTGGAGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp AATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGAGTGTTTGAGGTGAAGTaGCTAAAATCTGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: NLPVLISLPERSCEEVVRVFEVK*LKSVLR
Trigger: CCTGAGAACAGATTTTAGCAACTTCACCTCAAACAC...TCTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp TGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCCTAGGCATGCATATTaGTCAAAGTCATCTCTACTC +
Preference number: 5 (lower is better)
Translates to: CFQSPSAYFSPRAVLRGGPRHAY*SKSSLL
Trigger: GAGTAGAGATGACTTTGACAAATATGCATGCCTAGG...ACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS GCA 90 bp TCACCTTATTCTCCAAGTACTGGAAGTTTTCATACGTCCTTGTCATaGTTGGGCCAACACGGCTCTGAGGTTGTCACAGCTGAAATGGAG +
Preference number: 5 (lower is better)
Translates to: SPYSPSTGSFHTSLS*LGQHGSEVVTAEME
Trigger: CTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAACTTCCAGTACTTGGAGAATAAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp CAATCTCCCAGTGCTTATTTCTCTCCCAGAGCGGTCTTGCGAGGAGGTCGTGAGCTGAAATTTGGAATTTaGGAATCCAACCACACAGAT +
Preference number: 5 (lower is better)
Translates to: QSPSAYFSPRAVLRGGRELKFGI*ESNHTD
Trigger: ATCTGTGTGGTTGGATTCCAAAATTCCAAATTTCAG...CTCACGACCTCCTCGCAAGACCGCTCTGGGAGAGAAATAAGCACTGGGAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp AAAAGACAACAGCAAGCTAGGAAGGGTAGATGGAGTAGAATTCAGTTCAGGGGATCAGTGGAGGCATTGTaGTTGAGAGTAGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: KRQQQARKGRWSRIQFRGSVEAL*LRVATW
Trigger: CCAGGTGGCTACTCTCAACAACAATGCCTCCACTGA...TCCCCTGAACTGAATTCTACTCCATCTACCCTTCCTAGCTTGCTGTTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CAA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGCAGTTTCTTCAGGTCTaGCACCAGCTGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQQFLQV*HQLLDS
Trigger: CGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTG...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS-3UTR CAA 90 bp AGTCACCTAGGCATGCATATTTGTCAAAGTCATCTCTACTCTTTAAATGAGTGCGGTGTGATTCCCACGTaGGTTGTGCTGCAAGGACCA +
Preference number: 5 (lower is better)
Translates to: SHLGMHICQSHLYSLNECGVIPT*VVLQGP
Trigger: TGGTCCTTGCAGCACAACCAACGTGGGAATCACACC...GCACTCATTTAAAGAGTAGAGATGACTTTGACAAATATGCATGCCTAGGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp CTAGAAGCTCTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACGTGGAGGCATTGTTGTaGAGAGTAGCCACCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LEALEEARPINSEKEVDHVEALL*RVATWQ
Trigger: CTGCCAGGTGGCTACTCTCAACAACAATGCCTCCAC...GTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAGAGCTTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp CTAGAAGCTCTAGAAGAGGCAAGGCCAATAAATAGTGAAAAAGAAGTAGATCACCCTTCAGTGGAGGCATaGTTGTTGAGAGTAGCCACC +
Preference number: 5 (lower is better)
Translates to: LEALEEARPINSEKEVDHPSVEA*LLRVAT
Trigger: GGTGGCTACTCTCAACAACAATGCCTCCACTGAAGG...GTGATCTACTTCTTTTTCACTATTTATTGGCCTTGCCTCTTCTAGAGCTTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254868.8
ENST00000416562.7
CDS-3UTR CAA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGTTTTCATACGTCCTaGTCATGCTTGGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQSFHTS*SCLGQH
Trigger: GTGTTGGCCCAAGCATGACAAGGACGTATGAAAACT...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGAATCAACTGAGGAGTTaGGAGATGTTTCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: IQNVSSASNLPVLISLPENQLRS*EMFLWM
Trigger: CATCCAGAGAAACATCTCCAAACTCCTCAGTTGATT...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS-3UTR CAA 90 bp AAATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGGTGTTTGAGGTGAAGTaGCTAAAATCTGTTCTCAGG +
Preference number: 5 (lower is better)
Translates to: KFKMLAVLPISQCLFLSQVFEVK*LKSVLR
Trigger: CCTGAGAACAGATTTTAGCAACTTCACCTCAAACAC...CTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS-3UTR CAA 90 bp ATTCAAAATGTTAGCAGTGCTTCCAATCTCCCAGTGCTTATTTCTCTCCCAGAGCTGAAATTTGGAATTTaGGAATCCAACCACACAGAT +
Preference number: 5 (lower is better)
Translates to: IQNVSSASNLPVLISLPELKFGI*ESNHTD
Trigger: ATCTGTGTGGTTGGATTCCAAAATTCCAAATTTCAG...CTCTGGGAGAGAAATAAGCACTGGGAGATTGGAAGCACTGCTAACATTTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS CCA 72 bp ACCCAGCCCGTGCCCCTGCCAGTCGTCTGGCTGGCCTaGCTTCCAGTTCTGGAAGCCGGTCGCATAGTCTGT +
Preference number: 6 (lower is better)
Translates to: TQPVPLPVVWLA*LPVLEAGRIVC
Trigger: ACAGACTATGCGACCGGCTTCCAGAACTGGAAGCCAGGCCAGCCAGACGACTGGCAGGGGCACGGGCTGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
CDS CCA 72 bp TGCTGCAAGGACCAGAGGTGGGACGTCACTCAGAGTTaGGAGCGCTGTGTCCTGGAGAGCTGGGGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: CCKDQRWDVTQS*ERCVLESWGRG
Trigger: ACCTCTACCCCAGCTCTCCAGGACACAGCGCTCCCAACTCTGAGTGACGTCCCACCTCTGGTCCTTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS CAA 90 bp GTCTGGGGTGGAGCTGTGGGAGGTCTGGAGGGTGTGATTCCCACGTaGGTTGTGCTGCAAGGACCAGAGGTGGGACGTCACTCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: VWGGAVGGLEGVIPT*VVLQGPEVGRHSEL
Trigger: CAACTCTGAGTGACGTCCCACCTCTGGTCCTTGCAGCACAACCAACGTGGGAATCACACCCTCCAGACCTCCCACAGCTCCACCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS CCA 72 bp CAGTGGCCTAGGTGTGCCTTCTGCGTAGTGTGTTCCTaGAGCTCAGATACCCCTGCCTGCCGTTCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: QWPRCAFCVVCS*SSDTPACRSCL
Trigger: CAAGCAGGAACGGCAGGCAGGGGTATCTGAGCTCCAGGAACACACTACGCAGAAGGCACACCTAGGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254868.8
CDS CAA 90 bp GTTTTCATACGTCCTTGTCATGCTTGGGCCAACACGGCTCTGAGGTaGTCACAGCTGAAATGGAGGCAGGGCCGGCGCCCAGTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: VFIRPCHAWANTALR*SQLKWRQGRRPVWG
Trigger: ACCCCAGACTGGGCGCCGGCCCTGCCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS GCA 72 bp CTGGGGCCTGACCTCCTCAGAGTTAGGACCCACCAGTaGGCGTGGTGGAGGTACAGAAATGATAGGAGAAAT +
Preference number: 6 (lower is better)
Translates to: LGPDLLRVRTHQ*AWWRYRNDRRN
Trigger: ATTTCTCCTATCATTTCTGTACCTCCACCACGCGCACTGGTGGGTCCTAACTCTGAGGAGGTCAGGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS CAA 72 bp GAGAGTAGCCACCTGGCAGGTCAGTTTCTTCAGGTCTaGCACCAGCTGCTGGACTCGCAGGAGCATTTCAGA +
Preference number: 6 (lower is better)
Translates to: ESSHLAGQFLQV*HQLLDSQEHFR
Trigger: TCTGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTGACCTGCCAGGTGGCTACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS CAA 72 bp ACTGTGATCCTCCCTGTCCCAGTCTTTCTAGAGACCTaGCATCCTCTTCACACTAGGCCCGTCAGAGGCTGG +
Preference number: 6 (lower is better)
Translates to: TVILPVPVFLET*HPLHTRPVRGW
Trigger: CCAGCCTCTGACGGGCCTAGTGTGAAGAGGATGCAAGGTCTCTAGAAAGACTGGGACAGGGAGGATCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS GCA 72 bp AGAGTAGCCACCTGGCAGGTCAGTTTCTTCAGGTCTTaGACCAGCTGCTGGACTCGCAGGAGCATTTCAGAA +
Preference number: 6 (lower is better)
Translates to: RVATWQVSFFRS*TSCWTRRSISE
Trigger: TTCTGAAATGCTCCTGCGAGTCCAGCAGCTGGTGCAAGACCTGAAGAAACTGACCTGCCAGGTGGCTACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576549.6
ENST00000576617.5
CDS CCA 72 bp GTTTCTTCCAAGCTGCTGCCCTGGGAAGTCAGTGCCTaGATCTCCGCCACAGTGTTTGAGGTGAAGTTGCTA +
Preference number: 6 (lower is better)
Translates to: VSSKLLPWEVSA*ISATVFEVKLL
Trigger: TAGCAACTTCACCTCAAACACTGTGGCGGAGATCCAGGCACTGACTTCCCAGGGCAGCAGCTTGGAAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS CAA 72 bp CAGGTCCCTTCAGTGGAGGCTTCCTCACCATTGTTGTaGAGAGTAGCCACCTGGCAGGTCAGTTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: QVPSVEASSPLL*RVATWQVSFFR
Trigger: CCTGAAGAAACTGACCTGCCAGGTGGCTACTCTCAACAACAATGGTGAGGAAGCCTCCACTGAAGGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571664.1
CDS CCA 72 bp CCTGACCTCCTCAGAGTTAGGACCCACCAGTGCGCGTaGTGGAGGTACAGAAATGATAGGAGAAATCCTTCT +
Preference number: 6 (lower is better)
Translates to: PDLLRVRTHQCA*WRYRNDRRNPS
Trigger: AGAAGGATTTCTCCTATCATTTCTGTACCTCCACCACGCGCACTGGTGGGTCCTAACTCTGAGGAGGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS TCA 72 bp CTGGGAAGTCAGTGCCTGGATCTCCGCCACAGTGTTTaGGGTGAAGTTGCTAAAATCTGTTCTCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: LGSQCLDLRHSV*GEVAKICSQGH
Trigger: GTGACCCTGAGAACAGATTTTAGCAACTTCACCTCAAACACTGTGGCGGAGATCCAGGCACTGACTTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571664.1
ENST00000576617.5
CDS TCA 72 bp AGAACCATTTCCCTAAATGGGACATGTCTTAGGAACTaGGTACCAGAAGCCCTCACCTGCTCCTCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: RTISLNGTCLRN*VPEALTCSSLE
Trigger: CTCCAGGGAGGAGCAGGTGAGGGCTTCTGGTACTCAGTTCCTAAGACATGTCCCATTTAGGGAAATGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS GCA 72 bp TCTCCAAGTACTGGAAGTTTTCATACGTCCTTGTCATaGTTGGGCCAACACGGCTCTGAGGTTGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: SPSTGSFHTSLS*LGQHGSEVVTA
Trigger: AGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAACTTCCAGTACTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS CCA 72 bp GACCTCCTCAGAGTTAGGACCCACCAGTGCGCGTGGTaGAGGTACAGAAATGATAGGAGAAATCCTTCTAAA +
Preference number: 6 (lower is better)
Translates to: DLLRVRTHQCAW*RYRNDRRNPSK
Trigger: TTTAGAAGGATTTCTCCTATCATTTCTGTACCTCCACCACGCGCACTGGTGGGTCCTAACTCTGAGGAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571624.1
CDS CAA 72 bp CCAAGTACTGGAAGTTTTCATACGTCCTTGTCATGCTaGGGCCAACACGGCTCTGAGGTTGTCACAGCTGAA +
Preference number: 6 (lower is better)
Translates to: PSTGSFHTSLSC*GQHGSEVVTAE
Trigger: TTCAGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAACTTCCAGTACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS CAA 90 bp CCTTATTCTCCAAGTACTGGAAGTTTTCATACGTCCTTGTCATGCTaGGGCCAACACGGCTCTGAGGTTGTCACAGCTGAAATGGAGGCA +
Preference number: 6 (lower is better)
Translates to: PYSPSTGSFHTSLSC*GQHGSEVVTAEMEA
Trigger: TGCCTCCATTTCAGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAACTTCCAGTACTTGGAGAATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS TCA 72 bp GTGGCACAGATGACAGTCATTCTGGAAGCTCCCAGATaGTTCCAATGTGCGGCCAAGCTTAAGAACCATTTC +
Preference number: 6 (lower is better)
Translates to: VAQMTVILEAPR*FQCAAKLKNHF
Trigger: GAAATGGTTCTTAAGCTTGGCCGCACATTGGAATCATCTGGGAGCTTCCAGAATGACTGTCATCTGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS CCA 72 bp CAAGTACTGGAAGTTTTCATACGTCCTTGTCATGCTTaGGCCAACACGGCTCTGAGGTTGTCACAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: QVLEVFIRPCHA*ANTALRLSQLK
Trigger: TTTCAGCTGTGACAACCTCAGAGCCGTGTTGGCCCAAGCATGACAAGGACGTATGAAAACTTCCAGTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254868.8
ENST00000416562.7
ENST00000571624.1
ENST00000571664.1
ENST00000576617.5
CDS TCA 72 bp CTCAGGCCTATTAAATCTCTGAGGGTGTGGCACAGATaGCAGTCATTCTGGAAGCTCCCAGATGATTCCAAT +
Preference number: 6 (lower is better)
Translates to: LRPIKSLRVWHR*QSFWKLPDDSN
Trigger: ATTGGAATCATCTGGGAGCTTCCAGAATGACTGTCATCTGTGCCACACCCTCAGAGATTTAATAGGCCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS TCA 72 bp AGATGTTTCTCTGGATGCTCAGGCCTATTAAATCTCTaGGGGTGTGGCACAGATGACAGTCATTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: RCFSGCSGLLNL*GCGTDDSHSGS
Trigger: GCTTCCAGAATGACTGTCATCTGTGCCACACCCTCAGAGATTTAATAGGCCTGAGCATCCAGAGAAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS CCA 72 bp TCGTTAAATCAACTGAGGAGTTTGGAGATGTTTCTCTaGATGCTCAGGCCTATTAAATCTCTGAGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SLNQLRSLEMFL*MLRPIKSLRVW
Trigger: CCACACCCTCAGAGATTTAATAGGCCTGAGCATCCAGAGAAACATCTCCAAACTCCTCAGTTGATTTAACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5
CDS CAA 90 bp CTAGTGATTCTCAACTTTAGCTCTTCGTTAAATCAACTGAGGAGTTaGGAGATGTTTCTCTGGATGCTCAGGCCTATTAAATCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: LVILNFSSSLNQLRS*EMFLWMLRPIKSLR
Trigger: CCTCAGAGATTTAATAGGCCTGAGCATCCAGAGAAACATCTCCAAACTCCTCAGTTGATTTAACGAAGAGCTAAAGTTGAGAATCACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576617.5