Pregenerated sensors for CLDND2 (Homo sapiens)
Ensembl gene IDs: ENSG00000160318Ensembl transcript IDs: ENST00000291715.5, ENST00000593841.1, ENST00000601435.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCCCAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGAAGGCGCTCGTGGTCTaGCCCCGCAGCGACTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: PQAGCSHRHTGNPLMASVKALVV*PRSDSP Trigger: GGGCGAGTCGCTGCGGGGCCAGACCACGAGCGCCTT...CACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR CCA 90 bp | GCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTGCGAGGAAGGTGGGCCCTaGGGCGGATGGCCGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGCSHRHTGNPLMASVLCEEGGP*GGWPGG Trigger: CCCTCCCGGCCATCCGCCCCAGGGCCCACCTTCCTC...GCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR CCA 90 bp | CCCCAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGAGAGGAAGGCGCTCGTaGTCTGGCCCCGCAGCGACT | + |
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Preference number: 4 (lower is better) Translates to: PQAGCSHRHTGNPLMASVRGRRS*SGPAAT Trigger: AGTCGCTGCGGGGCCAGACCACGAGCGCCTTCCTCT...CACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR GCA 90 bp | CAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCCTCCAAGGGGGTCTCTaGCGGGTCTGCGGGAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: QAGCSHRHTGNPLMASVLLQGGL*RVCGSR Trigger: ACGACTCCCGCAGACCCGGCAGAGACCCCCTTGGAG...GAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTTCCTGGGAGGGCAGCTaGGGAGCCTATCAAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: APGRLQSQTHGESTDGVGSWEGS*GAYQGG Trigger: ACCGCCTTGATAGGCTCCCCAGCTGCCCTCCCAGGA...ACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCAGAAAGCAGAAGCCTaGGGGGACGGGGGTGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGRLQSQTHGESTDGVGAQKAEA*GDGGAE Trigger: CTCCGCACCCCCGTCCCCCCAGGCTTCTGCTTTCTG...AGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR GCA 90 bp | AGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTGCATCTGCCCCAGGCAGGCTaGAGTCACAGACACACGGGG | + |
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Preference number: 4 (lower is better) Translates to: RLQSQTHGESTDGVGALHLPQAG*SHRHTG Trigger: CCCCGTGTGTCTGTGACTGCAGCCTGCCTGGGGCAG...ATGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGAGTCGTTAGTGTGTTaGGGAGTCCCCGAGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: APGRLQSQTHGESTDGVGESLVC*GVPERS Trigger: GGACCTCTCGGGGACTCCCCAACACACTAACGACTC...ACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR TCA 90 bp | GGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTGCATGACACGGGGAATCCACTaGTGGCGTCGGTGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GCSHRHTGNPLMASVLCMTRGIH*WRRCSA Trigger: TGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGT...CATGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR GCA 90 bp | GCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTGCATGGCGTCGGTGCTCTaGATGATCATGTCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGCSHRHTGNPLMASVLCMASVL*MIMSAS Trigger: GCTGGCAGACATGATCATGCAGAGCACCGACGCCAT...GCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS-3UTR GCA 90 bp | AGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTGCATCTGCATGATCATGTCTaGCAGCAGAAAGCAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RLQSQTHGESTDGVGALHLHDHV*QQKAEA Trigger: GGCTTCTGCTTTCTGCTGGCAGACATGATCATGCAG...ATGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS CCA 90 bp | GTCAGCAGCAGCAGTCCGCCGAGGAAGAGGAAGGCGCTCGTGGTCTaGCCCCGCAGCGACTCGCCCTCGTCGCACCGAATCCGCAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: VSSSSPPRKRKALVV*PRSDSPSSHRIRSP Trigger: GGGACTGCGGATTCGGTGCGACGAGGGCGAGTCGCTGCGGGGCCAGACCACGAGCGCCTTCCTCTTCCTCGGCGGACTGCTGCTGCTGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291715.5 ENST00000593841.1 ENST00000601435.1 |
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| CDS CCA 90 bp | AGGCGGTCAGCAGCAGCAGTCCGCCGAGGAAGAGGAAGGCGCTCGTaGTCTGGCCCCGCAGCGACTCGCCCTCGTCGCACCGAATCCGCA | + |
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Preference number: 5 (lower is better) Translates to: RRSAAAVRRGRGRRS*SGPAATRPRRTESA Trigger: TGCGGATTCGGTGCGACGAGGGCGAGTCGCTGCGGGGCCAGACCACGAGCGCCTTCCTCTTCCTCGGCGGACTGCTGCTGCTGACCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291715.5 ENST00000593841.1 ENST00000601435.1 |
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| CDS CCA 90 bp | ACCATGAGGACGTTGGCCACGAGGCTGAGCAGAATGCCCCCACTCTaGAGGCTCCGCTTCACCCCCATGCCACTGAGGACCCAGTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: TMRTLATRLSRMPPL*RLRFTPMPLRTQCP Trigger: AGGGCACTGGGTCCTCAGTGGCATGGGGGTGAAGCGGAGCCTCCAGAGTGGGGGCATTCTGCTCAGCCTCGTGGCCAACGTCCTCATGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000601435.1 |
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| CDS-3UTR CAA 90 bp | CCAGGCAGGCTGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTGGAGTCGTTAGTGTGTaGGGGAGTCCCCGAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: PGRLQSQTHGESTDGVGAGVVSV*GSPREV Trigger: GACCTCTCGGGGACTCCCCAACACACTAACGACTCC...AGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCAGCCTGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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| CDS GCA 90 bp | TGCAGTCACAGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTaGATGATCATGTCTGCCAGCAGAAAGCAGAAGCCCGCGAGAATT | + |
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Preference number: 5 (lower is better) Translates to: CSHRHTGNPLMASVL*MIMSASRKQKPARI Trigger: AATTCTCGCGGGCTTCTGCTTTCTGCTGGCAGACATGATCATGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCTGTGACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291715.5 ENST00000601435.1 |
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| CDS CCA 72 bp | GCAGCAGCAGTCCGCCGAGGAAGAGGAAGGCGCTCGTaGTCTGGCCCCGCAGCGACTCGCCCTCGTCGCACC | + |
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Preference number: 6 (lower is better) Translates to: AAAVRRGRGRRS*SGPAATRPRRT Trigger: GGTGCGACGAGGGCGAGTCGCTGCGGGGCCAGACCACGAGCGCCTTCCTCTTCCTCGGCGGACTGCTGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291715.5 ENST00000593841.1 ENST00000601435.1 |
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| CDS CCA 72 bp | AGCAGTCCGCCGAGGAAGAGGAAGGCGCTCGTGGTCTaGCCCCGCAGCGACTCGCCCTCGTCGCACCGAATC | + |
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Preference number: 6 (lower is better) Translates to: SSPPRKRKALVV*PRSDSPSSHRI Trigger: GATTCGGTGCGACGAGGGCGAGTCGCTGCGGGGCCAGACCACGAGCGCCTTCCTCTTCCTCGGCGGACTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000291715.5 ENST00000593841.1 ENST00000601435.1 |
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| CDS CCA 72 bp | ACGTTGGCCACGAGGCTGAGCAGAATGCCCCCACTCTaGAGGCTCCGCTTCACCCCCATGCCACTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLATRLSRMPPL*RLRFTPMPLRL Trigger: CAGCCTCAGTGGCATGGGGGTGAAGCGGAGCCTCCAGAGTGGGGGCATTCTGCTCAGCCTCGTGGCCAACGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000291715.5 |
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| CDS CCA 72 bp | ACGTTGGCCACGAGGCTGAGCAGAATGCCCCCACTCTaGAGGCTCCGCTTCACCCCCATGCCACTGAGGACC | + |
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Preference number: 6 (lower is better) Translates to: TLATRLSRMPPL*RLRFTPMPLRT Trigger: GGTCCTCAGTGGCATGGGGGTGAAGCGGAGCCTCCAGAGTGGGGGCATTCTGCTCAGCCTCGTGGCCAACGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000601435.1 |
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| CDS CAA 90 bp | GATGCCGTGGTTGCATTCCTGCCACAGGCCACTGTGGCCCTCTTGTaGGCGGGTCCAGTAGTTGGTGGCCGTGGAGAGCACCATGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: DAVVAFLPQATVALL*AGPVVGGRGEHHED Trigger: GTCCTCATGGTGCTCTCCACGGCCACCAACTACTGGACCCGCCAACAAGAGGGCCACAGTGGCCTGTGGCAGGAATGCAACCACGGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291715.5 ENST00000601435.1 |
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| CDS CAA 90 bp | GCAGATGCCGTGGTTGCATTCCTGCCACAGGCCACTGTGGCCCTCTaGTTGGCGGGTCCAGTAGTTGGTGGCCGTGGAGAGCACCATGAG | + |
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Preference number: 6 (lower is better) Translates to: ADAVVAFLPQATVAL*LAGPVVGGRGEHHE Trigger: CTCATGGTGCTCTCCACGGCCACCAACTACTGGACCCGCCAACAAGAGGGCCACAGTGGCCTGTGGCAGGAATGCAACCACGGCATCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291715.5 ENST00000601435.1 |
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| CDS GCA 72 bp | AGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTaGATGATCATGTCTGCCAGCAGAAAGCAGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RHTGNPLMASVL*MIMSASRKQKP Trigger: GGGCTTCTGCTTTCTGCTGGCAGACATGATCATGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291715.5 ENST00000601435.1 |
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| CDS GCA 72 bp | AGACACACGGGGAATCCACTGATGGCGTCGGTGCTCTaGATGATCATGTCTGCCAGCAGAAAGCAGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RHTGNPLMASVL*MIMSASRKQKP Trigger: AGGCTTCTGCTTTCTGCTGGCAGACATGATCATGCAGAGCACCGACGCCATCAGTGGATTCCCCGTGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593841.1 |
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