RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLDND1 (Homo sapiens)

Ensembl gene IDs: ENSG00000080822

Ensembl transcript IDs: ENST00000341181.11, ENST00000394180.6, ENST00000394181.6, ENST00000394185.6, ENST00000502288.5, ENST00000502299.5, ENST00000502980.1, ENST00000503004.5, ENST00000503621.5, ENST00000503799.5, ENST00000506575.1, ENST00000506885.5, ENST00000506927.1, ENST00000507411.5, ENST00000507874.5, ENST00000507944.5, ENST00000508071.1, ENST00000508503.5, ENST00000508659.5, ENST00000508902.5, ENST00000510541.5, ENST00000510545.5, ENST00000511081.5, ENST00000511667.5, ENST00000512147.5, ENST00000513287.5, ENST00000513452.5, ENST00000513873.1, ENST00000513988.1, ENST00000514537.5, ENST00000515620.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGGAAAGGCACATCATATTACCACAAGAAATAAAGACCATAGTTaGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTT +
Preference number: 1 (lower is better)
Translates to: QGKAHHITTRNKDHS*RLMDSQNFRSCGRF
Trigger: AAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCTTGTGGTAATATGATGTGCCTTTCCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
3UTR-3UTR CCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCACTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAA +
Preference number: 2 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSLARLN*NSCSYK
Trigger: TTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAG...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATGTAGACAGACACAGTaGAGATACAAACAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSCRQTQ*RYKQLP
Trigger: TGGCAGCTGTTTGTATCTGCACTGTGTCTGTCTACA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR CCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCCTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAA +
Preference number: 2 (lower is better)
Translates to: LDLVVGFPALEGHYGETFLARLN*NSCSYK
Trigger: TTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAG...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR TCA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATTCTTCCCTGGTTTCCTaGGTCCAGCTAGGTCAATTT +
Preference number: 2 (lower is better)
Translates to: WWCVLGVCISARCHFTMHSSLVS*VQLGQF
Trigger: AAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGA...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTGTAGACAGACACAGTaGAGATACAAACAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: LDLVVGFPALEGHYGETFCRQTQ*RYKQLP
Trigger: TGGCAGCTGTTTGTATCTGCACTGTGTCTGTCTACA...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR CCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTACTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAA +
Preference number: 2 (lower is better)
Translates to: VVGFPALEGHYGETFFIVLARLN*NSCSYK
Trigger: TTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAG...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR CAA 90 bp TCTGAGGGTGGAAGTAGATTCGAGGGTGATTTCAGGGAAGTAGATTaGTCTTTTCCTCCAGGGAATAATCAAGGTTCTTCCCAAATCCCT +
Preference number: 2 (lower is better)
Translates to: SEGGSRFEGDFREVD*SFPPGNNQGSSQIP
Trigger: AGGGATTTGGGAAGAACCTTGATTATTCCCTGGAGGAAAAGACAAATCTACTTCCCTGAAATCACCCTCGAATCTACTTCCACCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAACTAATACTGCTGGTTaGCTGGCTATCTACAACAGC +
Preference number: 2 (lower is better)
Translates to: VVGFPALEGHYGETFFIVTNTAG*LAIYNS
Trigger: GCTGTTGTAGATAGCCAGTCAACCAGCAGTATTAGT...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAACAATTTGGTGGTACTaGAAATCTTACGGAGAGTTA +
Preference number: 2 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSTIWWY*KSYGEL
Trigger: TAACTCTCCGTAAGATTTTCAGTACCACCAAATTGT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR TCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTGGTTGCATCGTCCATaGGTGGAAATTTTACAGTTC +
Preference number: 2 (lower is better)
Translates to: LNACIDFFPGFLSPARSIWLHRP*VEILQF
Trigger: GAACTGTAAAATTTCCACTCATGGACGATGCAACCA...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR GCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTCATCTTCTCAGAGATTaGATCTGTTGGTTGCATCGT +
Preference number: 2 (lower is better)
Translates to: LNACIDFFPGFLSPARSIHLLRD*ICWLHR
Trigger: ACGATGCAACCAACAGATGCAATCTCTGAGAAGATG...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR CCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAATACTGCTGGTTGACTaGCTATCTACAACAGCAAAG +
Preference number: 2 (lower is better)
Translates to: VVGFPALEGHYGETFFIVILLVD*LSTTAK
Trigger: CTTTGCTGTTGTAGATAGCCAGTCAACCAGCAGTAT...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCATACTGCTGGTTGACTaGCTATCTACAACAGCAAAG +
Preference number: 2 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPILLVD*LSTTAK
Trigger: CTTTGCTGTTGTAGATAGCCAGTCAACCAGCAGTAT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR TCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCACAATTTGGTGGTACTaGAAATCTTACGGAGAGTTA +
Preference number: 2 (lower is better)
Translates to: LDLVVGFPALEGHYGETFTIWWY*KSYGEL
Trigger: TAACTCTCCGTAAGATTTTCAGTACCACCAAATTGT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAGAAGCTATGTGTCAATaGTTAGGGAAAATGATCTTA +
Preference number: 2 (lower is better)
Translates to: VVGFPALEGHYGETFFIVEAMCQ*LGKMIL
Trigger: TAAGATCATTTTCCCTAAGCATTGACACATAGCTTC...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR GCA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACATTGCATCTGTTGGTTaGATCGTCCATGAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDIASVG*IVHEWK
Trigger: TTTCCACTCATGGACGATGCAACCAACAGATGCAAT...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR CCA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACCCAGAGCAGAAAAACTaGGAAGAAATACTCAACCTA +
Preference number: 2 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDPEQKN*EEILNL
Trigger: TAGGTTGAGTATTTCTTCCCAGTTTTTCTGCTCTGG...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR CCA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACTGCATCGTCCATGAGTaGAAATTTTACAGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDCIVHE*KFYSSK
Trigger: CTTTGAACTGTAAAATTTCCACTCATGGACGATGCA...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR CAA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTCATCTTCTCAGAGATaGCATCTGTTGGTTGCATCG +
Preference number: 3 (lower is better)
Translates to: LNACIDFFPGFLSPARSISSSQR*HLLVAS
Trigger: CGATGCAACCAACAGATGCAATCTCTGAGAAGATGA...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR CAA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCAGTGAACATAAAGTTTaGACGATGAGAGGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: LDLVVGFPALEGHYGETFSEHKV*TMRGFP
Trigger: TGGGAAACCTCTCATCGTCAAAACTTTATGTTCACT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR CAA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGTGAACATAAAGTTTaGACGATGAGAGGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPSEHKV*TMRGFP
Trigger: TGGGAAACCTCTCATCGTCAAAACTTTATGTTCACT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR-3UTR CAA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACCAGAGATTGCATCTGTaGGTTGCATCGTCCATGAGT +
Preference number: 3 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDQRLHL*VASSMS
Trigger: ACTCATGGACGATGCAACCAACAGATGCAATCTCTG...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR TCA 72 bp GTGCAGATACAAACAGCTGCCATATCTCACCTCAGATaGAGCTATGTGTCAATGCTTAGGGAAAATGATCTT +
Preference number: 3 (lower is better)
Translates to: VQIQTAAISHLR*SYVSMLRENDL
Trigger: AAGATCATTTTCCCTAAGCATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR GCA 72 bp TTGTGGTTTCCGGGATCAACAAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTCACACATTTTGTGACC +
Preference number: 3 (lower is better)
Translates to: LWFPGSTNFSMN*SVSVKLTHFVT
Trigger: GGTCACAAAATGTGTGAGTTTCACACTAACTGAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503799.5
3UTR-3UTR CAA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACTTCAGGGAAGTAGATTaGTCTTTTCCTCCAGGGAAT +
Preference number: 3 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDFREVD*SFPPGN
Trigger: ATTCCCTGGAGGAAAAGACAAATCTACTTCCCTGAA...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
3UTR-3UTR CAA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAGTGAACATAAAGTTTaGACGATGAGAGGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: VLKILRRVKNNTNPRPAESEHKV*TMRGFP
Trigger: TGGGAAACCTCTCATCGTCAAAACTTTATGTTCACT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR GCA 72 bp CTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATaGTTAGGGAAAATGATCTTAGATAATTTCCCAATT +
Preference number: 3 (lower is better)
Translates to: LPYLTSDEAMCQ*LGKMILDNFPI
Trigger: AATTGGGAAATTATCTAAGATCATTTTCCCTAAGCATTGACACATAGCTTCATCTGAGGTGAGATATGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR CCA 72 bp GCACATCATATTACCACAAGAAATAAAGACCATAGTTaGAGGTTAATGGACAGCCAGAACTTTAGATCTTGT +
Preference number: 3 (lower is better)
Translates to: AHHITTRNKDHS*RLMDSQNFRSC
Trigger: ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCTTGTGGTAATATGATGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
3UTR CCA 72 bp GAGTTAAAAATAATACTAATCCTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAAGTTAAAATTTCAAGT +
Preference number: 3 (lower is better)
Translates to: ELKIILILARLN*NSCSYKVKISS
Trigger: ACTTGAAATTTTAACTTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAGGATTAGTATTATTTTTAACTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATCTGACGCACTTCCCTaGAGAGCCCGCCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSSDALP*RARPLH
Trigger: ATGGAGGGGGCGGGCTCTGCAGGGAAGTGCGTCAGA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTCCCCGCGCCTCCTCTaGCGCACTTCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPSPRLL*RTSLQS
Trigger: GCTCTGCAGGGAAGTGCGTCAGAGGAGGCGCGGGGA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTATCCCCGCGCCTCCTCTaGCGCACTTCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVSPRLL*RTSLQS
Trigger: GCTCTGCAGGGAAGTGCGTCAGAGGAGGCGCGGGGA...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAATACGCCCATCCTCCTaGTCCGCCAGCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSIRPSS*SASFTL
Trigger: GAGGGTGAAGCTGGCGGAGCAGGAGGATGGGCGTAT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394180.6
CDS-3UTR GCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTACACGCCCATCCTCCTaGTCCGCCAGCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSITRPSS*SASFTL
Trigger: GAGGGTGAAGCTGGCGGAGCAGGAGGATGGGCGTGT...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCACACGCCCATCCTCCTaGTCCGCCAGCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPTRPSS*SASFTL
Trigger: GAGGGTGAAGCTGGCGGAGCAGGAGGATGGGCGTGT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394185.6
ENST00000510545.5
CDS-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATCTTTCCGGTTGGTGTaGGCAGCCCAGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSSFRLV*AAQMKR
Trigger: TCTCTTCATCTGGGCTGCTCACACCAACCGGAAAGA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCACAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSQGDGE*PWQWWD
Trigger: ATCCCACCATTGCCACGGGCATTCTCCATCTCCTTG...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATTCTGACGCACTTCCCTaGAGAGCCCGCCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNSDALP*RARPLH
Trigger: ATGGAGGGGGCGGGCTCTGCAGGGAAGTGCGTCAGA...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTCTGACGCACTTCCCTaGAGAGCCCGCCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRSDALP*RARPLH
Trigger: ATGGAGGGGGCGGGCTCTGCAGGGAAGTGCGTCAGA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR TCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTCCCCGCGCCTCCTCTaGCGCACTTCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCSPRLL*RTSLQS
Trigger: GCTCTGCAGGGAAGTGCGTCAGAGGAGGCGCGGGGA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGTAGGAGGGACAGACTaGAAGCTGTCTGAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRVGGTD*KLSEAA
Trigger: CGCCGCCTCAGACAGCTTTCAGTCTGTCCCTCCTAC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394180.6
CDS-3UTR TCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCATGGCCGCGGTAAAATaGCTCAAGGCAGATCGCGCT +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFMAAVK*LKADRA
Trigger: AGCGCGATCTGCCTTGAGTCATTTTACCGCGGCCAT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAGCTCGCCCATCCTCCTaGTCCGCCAGCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEARPSS*SASFTL
Trigger: GAGGGTGAAGCTGGCGGAGCAGGAGGATGGGCGAGC...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341181.11
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCACAGTGTACACAGACCTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSQCTQT*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGGTCTGTGTACACTG...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTCTGGCATTCAGACTaGTCCAGGATGCTACGGAGA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSFWHSD*SRMLRR
Trigger: TCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
CDS-3UTR GCA 90 bp CTGGCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCTTCTGGCATTCAGACTaGTCCAGGATGCTACGGAGA +
Preference number: 4 (lower is better)
Translates to: LATPKIGPKEINPAIVVSFWHSD*SRMLRR
Trigger: TCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAA...GGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR GCA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTAGCAGGAGTGGCTGTGTaGTTGGACTCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NACIDFFPGFLSPARSILAGVAV*LDSAPA
Trigger: AGCTGGAGCTGAGTCCAAGCACACAGCCACTCCTGC...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAAACGGTTATCCATTCTaGCATTCAGACTGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSNGYPF*HSDCSP
Trigger: GGGCGAGCAGTCTGAATGCCAGAATGGATAACCGTT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341181.11
CDS-3UTR CCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAAGAAGTCTGTGCCAATaGAGGCTGCCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSRSLCQ*RLPCRW
Trigger: CCATCTACATGGCAGCCTCCATTGGCACAGACTTCT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSCPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSCDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAGCAAACTGGGGTTGCTaGGTTTGGAAAATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSANWGC*VWKMGS
Trigger: ACTTCCCATTTTCCAAACTCAGCAACCCCAGTTTGC...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp CTGGCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LATPKIGPKEINPAIVVSCANGG*HVDGGN
Trigger: ATTTCCACCATCTACATGGCAGCCTCCATTGGCACA...GGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSCANGG*HVDGGN
Trigger: ATTTCCACCATCTACATGGCAGCCTCCATTGGCACA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCCAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFQGDGE*PWQWWD
Trigger: ATCCCACCATTGCCACGGGCATTCTCCATCTCCTTG...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATCTGACGCACTTCCCTaGAGAGCCCGCCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAESDALP*RARPLH
Trigger: ATGGAGGGGGCGGGCTCTGCAGGGAAGTGCGTCAGA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000510545.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAACACGCCCATCCTCCTaGTCCGCCAGCTTCACCCTC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAETRPSS*SASFTL
Trigger: GAGGGTGAAGCTGGCGGAGCAGGAGGATGGGCGTGT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394185.6
ENST00000510545.5
CDS-3UTR CCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCAGACCTGCAAGGAGATaGAGAATGCCCGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFRPARR*RMPVAM
Trigger: CATTGCCACGGGCATTCTCCATCTCCTTGCAGGTCT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp GCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATTGCCTGTCCTTTCTaGTGGGCTATACCAATGCAT +
Preference number: 4 (lower is better)
Translates to: ATPKIGPKEINPAIVVSGIACPF*WAIPMH
Trigger: ATGCATTGGTATAGCCCACCAGAAAGGACAGGCAAT...CCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAACACTCCCAAGGCGTaGACAGGGCTCAACGGCAGT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRNTPKA*TGLNGS
Trigger: ACTGCCGTTGAGCCCTGTCCACGCCTTGGGAGTGTT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATGTTTTTGGGTATGGTaGTACACCGTCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSCFWVW*YTVSTI
Trigger: GATTGTGGAGACGGTGTATCACCATACCCAAAAACA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTATCTTTCCGGTTGGTGTaGGCAGCCCAGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVSFRLV*AAQMKR
Trigger: TCTCTTCATCTGGGCTGCTCACACCAACCGGAAAGA...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTACAAGGCAGATCGCGCTaGGTCAAATACTACACGGCA +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVQGRSR*VKYYTA
Trigger: TGCCGTGTAGTATTTGACTCAGCGCGATCTGCCTTG...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCCAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPQGDGE*PWQWWD
Trigger: ATCCCACCATTGCCACGGGCATTCTCCATCTCCTTG...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTACAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: NACIDFFPGFLSPARSILQGDGE*PWQWWD
Trigger: ATCCCACCATTGCCACGGGCATTCTCCATCTCCTTG...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCCAGTGTACACAGACCTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFQCTQT*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGGTCTGTGTACACTG...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAGCAGTTTCTTGCTCATaGCACACGATATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSAVSCS*HTICLH
Trigger: ATGAAGGCATATCGTGTGGCATGAGCAAGAAACTGC...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTCTGGCATTCAGACTaGTCCAGGATGCTACGGAGA +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFFWHSD*SRMLRR
Trigger: TCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAA...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGACCTGCAAGGAGATaGAGAATGCCCGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPRPARR*RMPVAM
Trigger: CATTGCCACGGGCATTCTCCATCTCCTTGCAGGTCT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAGGGAGCTCTAGTTTCTaGTGGAGTAGTTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSGSSSF*WSSSIP
Trigger: TGGAATTGAACTACTCCACCAGAAACTAGAGCTCCC...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp ATTTTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAGGACTCAGCTCCAGCTaGAAGCATGCTCTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: ILNACIDFFPGFLSPARSGLSSS*KHALLC
Trigger: ACAAAGGAGAGCATGCTTCCAGCTGGAGCTGAGTCC...TGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATTCTTTCCGGTTGGTGTaGGCAGCCCAGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNSFRLV*AAQMKR
Trigger: TCTCTTCATCTGGGCTGCTCACACCAACCGGAAAGA...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTCTTTCCGGTTGGTGTaGGCAGCCCAGATGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRSFRLV*AAQMKR
Trigger: TCTCTTCATCTGGGCTGCTCACACCAACCGGAAAGA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSISFGK*KHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTAT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGCAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRQGDGE*PWQWWD
Trigger: ATCCCACCATTGCCACGGGCATTCTCCATCTCCTTG...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTACAGTGTACACAGACCTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVQCTQT*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGGTCTGTGTACACTG...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCCAGTGTACACAGACCTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPQCTQT*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGGTCTGTGTACACTG...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCAAGCAGGCAGTTTCTTaGTCATGCCACACGATATGC +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFKQAVS*SCHTIC
Trigger: GCATATCGTGTGGCATGAGCAAGAAACTGCCTGCTT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTTCTGGCATTCAGACTaGTCCAGGATGCTACGGAGA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPFWHSD*SRMLRR
Trigger: TCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
CDS-3UTR GCA 90 bp ATTTTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCATTCTGGCATTCAGACTaGTCCAGGATGCTACGGAGA +
Preference number: 4 (lower is better)
Translates to: ILNACIDFFPGFLSPARSFWHSD*SRMLRR
Trigger: TCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAA...TGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATGCTCTCCTTTGTCACTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: WWCVLGVCISARCHFTMHALLCH*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGTGACAAAGGAGAGC...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTCTCCAGCTGGAAGCATaGTCTCCTTTGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSILQLEA*SPLSLQ
Trigger: TTGCAGTGACAAAGGAGAGCATGCTTCCAGCTGGAG...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCACCTCAACAGAAATCTTaGTCTCTCCCTAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSPQQKS*SLPKSS
Trigger: TGAGGATTTAGGGAGAGAGCAAGATTTCTGTTGAGG...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPCPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAGACCTGCAAGGAGATaGAGAATGCCCGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRRPARR*RMPVAM
Trigger: CATTGCCACGGGCATTCTCCATCTCCTTGCAGGTCT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAAGCTCTAGTTTCTGGTaGAGTAGTTCAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSSSSFW*SSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTGGGCACCTAATGAAATaGTGGTGTGTTTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSIGHLMK*WCVLGV
Trigger: CACCCCCAAAACACACCACCATTTCATTAGGTGCCC...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPCDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTATGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVCDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTATGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: NACIDFFPGFLSPARSILCDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSNSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTATCTTCCCTGGTTTCCTaGGTCCAGCTAGGTCAATTT +
Preference number: 4 (lower is better)
Translates to: NACIDFFPGFLSPARSILSSLVS*VQLGQF
Trigger: AAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGA...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: WWCVLGVCISARCHFTMHCANGG*HVDGGN
Trigger: ATTTCCACCATCTACATGGCAGCCTCCATTGGCACA...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGCAGTGTACACAGACCTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRQCTQT*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGGTCTGTGTACACTG...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAAGCAGGCAGTTTCTTaGTCATGCCACACGATATGC +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPKQAVS*SCHTIC
Trigger: GCATATCGTGTGGCATGAGCAAGAAACTGCCTGCTT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTCTGGCATTCAGACTaGTCCAGGATGCTACGGAGA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRFWHSD*SRMLRR
Trigger: TCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGCATTCAGACCAGGATaGTACGGAGACAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRAFRPG*YGDRGL
Trigger: AAGACCTCTGTCTCCGTAGCATCCTGGTCTGAATGC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510545.5
CDS-3UTR GCA 90 bp AAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAATGGAACAAGAACAATTaGCTGTCCTTTCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KIGPKEINPAIVVSGINKWNKNN*LSFLVG
Trigger: GCCCACCAGAAAGGACAGGCAATTGTTCTTGTTCCA...TTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAGAAGTCTGTGCCAATaGAGGCTGCCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNRSLCQ*RLPCRW
Trigger: CCATCTACATGGCAGCCTCCATTGGCACAGACTTCT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AAGGAACTGGCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGTCAATCCCGCTATTGTaGTTTCCGGGATCAACAAAT +
Preference number: 4 (lower is better)
Translates to: KELATPKIGPKEINPAIVSIPLL*FPGSTN
Trigger: ATTTGTTGATCCCGGAAACCACAATAGCGGGATTGA...CACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAGTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATTGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNCPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCCTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPLARLN*NSCSYK
Trigger: TTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAG...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATCACTGGAATTTTCTTaGACTGGACTTCGATATTCA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSSLEFS*TGLRYS
Trigger: TGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGA...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTATGTTTTTGGGTATGGTaGTACACCGTCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVCFWVW*YTVSTI
Trigger: GATTGTGGAGACGGTGTATCACCATACCCAAAAACA...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp CCTAAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAATTTCTCCATTGTTTTTGGGTATGGTaGTACACCGTCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: PKEINPAIVVSGINKFLHCFWVW*YTVSTI
Trigger: GATTGTGGAGACGGTGTATCACCATACCCAAAAACA...ATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR TCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTGTTTTTGGGTATGGTaGTACACCGTCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSICFWVW*YTVSTI
Trigger: GATTGTGGAGACGGTGTATCACCATACCCAAAAACA...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRCDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCACTAATACTGCTGGTTaGCTGGCTATCTACAACAGC +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPTNTAG*LAIYNS
Trigger: GCTGTTGTAGATAGCCAGTCAACCAGCAGTATTAGT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAGGCAAGTATACACCGTaGCCGCACCAAACACCTTAC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEGKYTP*PHQTPY
Trigger: GTAAGGTGTTTGGTGCGGTCACGGTGTATACTTGCC...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRCANGG*HVDGGN
Trigger: ATTTCCACCATCTACATGGCAGCCTCCATTGGCACA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAAGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: KIGPKEINPAIVVSGINKGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...TTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR GCA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: WWCVLGVCISARCHFTMHGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAGCAGTTTCTTGCTCATaGCACACGATATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVAVSCS*HTICLH
Trigger: ATGAAGGCATATCGTGTGGCATGAGCAAGAAACTGC...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAAGCAGGCAGTTTCTTaGTCATGCCACACGATATGC +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNKQAVS*SCHTIC
Trigger: GCATATCGTGTGGCATGAGCAAGAAACTGCCTGCTT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTGTAGACAGACACAGTaGAGATACAAACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPCRQTQ*RYKQLP
Trigger: TGGCAGCTGTTTGTATCTGCACTGTGTCTGTCTACA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTCAATCCCGCTATTGTaGTTTCCGGGATCAACAAAT +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFSIPLL*FPGSTN
Trigger: ATTTGTTGATCCCGGAAACCACAATAGCGGGATTGA...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAGACCTGCAAGGAGATaGAGAATGCCCGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAERPARR*RMPVAM
Trigger: CATTGCCACGGGCATTCTCCATCTCCTTGCAGGTCT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCAGCTCTAGTTTCTGGTaGAGTAGTTCAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFSSSFW*SSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCGGGAGCTCTAGTTTCTaGTGGAGTAGTTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPGSSSF*WSSSIP
Trigger: TGGAATTGAACTACTCCACCAGAAACTAGAGCTCCC...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATCTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNLARLN*NSCSYK
Trigger: TTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAG...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATTGTTTTTGGGTATGGTaGTACACCGTCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNCFWVW*YTVSTI
Trigger: GATTGTGGAGACGGTGTATCACCATACCCAAAAACA...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGACTAATACTGCTGGTTaGCTGGCTATCTACAACAGC +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRTNTAG*LAIYNS
Trigger: GCTGTTGTAGATAGCCAGTCAACCAGCAGTATTAGT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTTGGAAAATGGGAAGTaGCTCAGGAAAGATAAGAGC +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPLENGK*LRKDKS
Trigger: GCTCTTATCTTTCCTGAGTCACTTCCCATTTTCCAA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCCCTTACAAAGGTTCATaGAAACAGACTCGCAAACTG +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPPYKGS*KQTRKL
Trigger: CAGTTTGCGAGTCTGTTTTCATGAACCTTTGTAAGG...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTATCCACAATCCCACTGTaGCATTGTATCGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVSTIPL*HCIEKV
Trigger: CACTTTTTCGATACAATGGCACAGTGGGATTGTGGA...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTCCACAATCCCACTGTaGCATTGTATCGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSISTIPL*HCIEKV
Trigger: CACTTTTTCGATACAATGGCACAGTGGGATTGTGGA...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPISFGK*KHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTAT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAACAGTGTACACAGACCTaGAAGGAGATGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEQCTQT*KEMENA
Trigger: GGCATTCTCCATCTCCTTGCAGGTCTGTGTACACTG...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATGCAGTTTCTTGCTCATaGCACACGATATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNAVSCS*HTICLH
Trigger: ATGAAGGCATATCGTGTGGCATGAGCAAGAAACTGC...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGCAGTTTCTTGCTCATaGCACACGATATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRAVSCS*HTICLH
Trigger: ATGAAGGCATATCGTGTGGCATGAGCAAGAAACTGC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAGAAGCTATGTGTCAATaGTTAGGGAAAATGATCTTA +
Preference number: 4 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSEAMCQ*LGKMIL
Trigger: TAAGATCATTTTCCCTAAGCATTGACACATAGCTTC...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTATTGCATCTGTTGGTTaGATCGTCCATGAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSIIASVG*IVHEWK
Trigger: TTTCCACTCATGGACGATGCAACCAACAGATGCAAT...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp ATTTTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCACATCTTCTCAGAGATTaGATCTGTTGGTTGCATCGT +
Preference number: 4 (lower is better)
Translates to: ILNACIDFFPGFLSPARSHLLRD*ICWLHR
Trigger: ACGATGCAACCAACAGATGCAATCTCTGAGAAGATG...TGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTATCCCTAAATCCTCAGTaGAACATACGTCCGCAAAAA +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVSLNPQ*NIRPQK
Trigger: TTTTTGCGGACGTATGTTGCACTGAGGATTTAGGGA...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAGAAGTCTGTGCCAATaGAGGCTGCCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAERSLCQ*RLPCRW
Trigger: CCATCTACATGGCAGCCTCCATTGGCACAGACTTCT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp ACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATCGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: TPKIGPKEINPAIVVSGIGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...GATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCTCAATCCCGCTATTGTaGTTTCCGGGATCAACAAAT +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPSIPLL*FPGSTN
Trigger: ATTTGTTGATCCCGGAAACCACAATAGCGGGATTGA...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATTCAATCCCGCTATTGTaGTTTCCGGGATCAACAAAT +
Preference number: 4 (lower is better)
Translates to: WWCVLGVCISARCHFTMHSIPLL*FPGSTN
Trigger: ATTTGTTGATCCCGGAAACCACAATAGCGGGATTGA...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAECPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACTGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDCPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTAGACCTGCAAGGAGATaGAGAATGCCCGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCRPARR*RMPVAM
Trigger: CATTGCCACGGGCATTCTCCATCTCCTTGCAGGTCT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTAGTTTCTGGTaGAGTAGTTCAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPSSSFW*SSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAACGGTTATCCATTCTaGCATTCAGACCAGGATGCT +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNNGYPF*HSDQDA
Trigger: AGCATCCTGGTCTGAATGCCAGAATGGATAACCGTT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510545.5
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAGAAGCAGTGGAAATTaGCTTCTCCCAGTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRRSSGN*LLPVSS
Trigger: AGAGGAAACTGGGAGAAGCCAATTTCCACTGCTTCT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR TCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTCACTGGAATTTTCTTaGACTGGACTTCGATATTCA +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFSLEFS*TGLRYS
Trigger: TGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGA...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAECDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPNSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp ATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAATTTCTCCATGAACTGCTCAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: INPAIVVSGINKFLHELLNSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...GAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR TCA 90 bp ATTTTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: ILNACIDFFPGFLSPARSNSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...TGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACT +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVGGSLW*NVLYST
Trigger: AGTACTATAAAGAACGTTTCACCATAATGACCCTCC...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACT +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPGGSLW*NVLYST
Trigger: AGTACTATAAAGAACGTTTCACCATAATGACCCTCC...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR TCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCTCTCCCAGTTTCCTCTaGAGAGGGAAGCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSISPSFL*RGKPPK
Trigger: TTTAGGAGGCTTCCCTCTTCAGAGGAAACTGGGAGA...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAECANGG*HVDGGN
Trigger: ATTTCCACCATCTACATGGCAGCCTCCATTGGCACA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATTCCACAATCCCACTGTaGCATTGTATCGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNSTIPL*HCIEKV
Trigger: CACTTTTTCGATACAATGGCACAGTGGGATTGTGGA...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTCCACAATCCCACTGTaGCATTGTATCGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRSTIPL*HCIEKV
Trigger: CACTTTTTCGATACAATGGCACAGTGGGATTGTGGA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAATTTCTCCATGAATCCACAATCCCACTGTaGCATTGTATCGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: KEINPAIVVSGINKFLHESTIPL*HCIEKV
Trigger: CACTTTTTCGATACAATGGCACAGTGGGATTGTGGA...TTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR GCA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: LDLVVGFPALEGHYGETFNFSMN*SVSVKL
Trigger: GAGTTTCACACTAACTGAGCAGTTCATGGAGAAATT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRISFGK*KHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTAT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAAGCAGGCAGTTTCTTaGTCATGCCACACGATATGC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEKQAVS*SCHTIC
Trigger: GCATATCGTGTGGCATGAGCAAGAAACTGCCTGCTT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGCAAGCTTCTTTACGCTaGCAAATGCTTCACTCCTAT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRQASLR*QMLHSY
Trigger: ATAGGAGTGAAGCATTTGGCAGCGTAAAGAAGCTTG...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAGAAGTCTGTGCCAATaGAGGCTGCCATGTAGATGG +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIRSLCQ*RLPCRW
Trigger: CCATCTACATGGCAGCCTCCATTGGCACAGACTTCT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCTGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSICPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCCPWQW*DISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAGCTCTAGTTTCTGGTaGAGTAGTTCAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRSSSFW*SSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAGCTCTAGTTTCTGGTaGAGTAGTTCAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNSSSFW*SSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATATACTGCTGGTTGACTaGCTATCTACAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNILLVD*LSTTAK
Trigger: CTTTGCTGTTGTAGATAGCCAGTCAACCAGCAGTAT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAATAAAGACCATAGTTaGAGGTTAATGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPNKDHS*RLMDSQ
Trigger: CTGGCTGTCCATTAACCTCCAACTATGGTCTTTATT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTACCAGAGCAGAAAAACTaGGAAGAAATACTCAACCTA +
Preference number: 4 (lower is better)
Translates to: NACIDFFPGFLSPARSILPEQKN*EEILNL
Trigger: TAGGTTGAGTATTTCTTCCCAGTTTTTCTGCTCTGG...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGCTGAGTTTGGAAAATaGGAAGTGACTCAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRAEFGK*EVTQER
Trigger: TCTTTCCTGAGTCACTTCCCATTTTCCAAACTCAGC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAGGAAAAAGAAGCAGTaGAAATTGGCTTCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNRKKKQ*KLASPS
Trigger: ACTGGGAGAAGCCAATTTCCACTGCTTCTTTTTCCT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR TCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATGTTTTTGGGTATGGTaGTACACCGTCTCCACAATC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAECFWVW*YTVSTI
Trigger: GATTGTGGAGACGGTGTATCACCATACCCAAAAACA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTGTGACCACATCAAATaGCTCTGTCCTTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCCDHIK*LCPFWW
Trigger: CCACCAGAAAGGACAGAGTCATTTGATGTGGTCACA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNNSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRNSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAACTAATACTGCTGGTTaGCTGGCTATCTACAACAGC +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAETNTAG*LAIYNS
Trigger: GCTGTTGTAGATAGCCAGTCAACCAGCAGTATTAGT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCACAATTTGGTGGTACTaGAAATCTTACGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPTIWWY*KSYGEL
Trigger: TAACTCTCCGTAAGATTTTCAGTACCACCAAATTGT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAACAATTTGGTGGTACTaGAAATCTTACGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVTIWWY*KSYGEL
Trigger: TAACTCTCCGTAAGATTTTCAGTACCACCAAATTGT...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACT +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNGGSLW*NVLYST
Trigger: AGTACTATAAAGAACGTTTCACCATAATGACCCTCC...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACT +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRGGSLW*NVLYST
Trigger: AGTACTATAAAGAACGTTTCACCATAATGACCCTCC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGATTCCTTATACTTCTaGACCTCCTCAACAGAAATC +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRDSLYF*TSSTEI
Trigger: GATTTCTGTTGAGGAGGTTCAGAAGTATAAGGAATC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCCANGG*HVDGGN
Trigger: ATTTCCACCATCTACATGGCAGCCTCCATTGGCACA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVNFSMN*SVSVKL
Trigger: GAGTTTCACACTAACTGAGCAGTTCATGGAGAAATT...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATTTTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: ILNACIDFFPGFLSPARSNFSMN*SVSVKL
Trigger: GAGTTTCACACTAACTGAGCAGTTCATGGAGAAATT...TGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAAGCAGGCAGTTTCTTaGTCATGCCACACGATATGC +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIKQAVS*SCHTIC
Trigger: GCATATCGTGTGGCATGAGCAAGAAACTGCCTGCTT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTACAGACTGAATTTTTaGACGAGCTGCAGAGGATTA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRYRLNF*TSCRGL
Trigger: TAATCCTCTGCAGCTCGTGCAAAAATTCAGTCTGTA...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCCTCGCCCGGCTGAACTaGAATTCTTGCAGTTACAAA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSILARLN*NSCSYK
Trigger: TTTGTAACTGCAAGAATTCCAGTTCAGCCGGGCGAG...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAATAAAGACCATAGTTaGAGGTTAATGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNNKDHS*RLMDSQ
Trigger: CTGGCTGTCCATTAACCTCCAACTATGGTCTTTATT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAATAAAGACCATAGTTaGAGGTTAATGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRNKDHS*RLMDSQ
Trigger: CTGGCTGTCCATTAACCTCCAACTATGGTCTTTATT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTATCAGGAGGAAAGATaGGAAATTTTGACCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LNACIDFFPGFLSPARSIYQEER*EILTCL
Trigger: CAAACAGGTCAAAATTTCCCATCTTTCCTCCTGATA...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCACTAATACTGCTGGTTaGCTGGCTATCTACAACAGC +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSITNTAG*LAIYNS
Trigger: GCTGTTGTAGATAGCCAGTCAACCAGCAGTATTAGT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTACTAATACTGCTGGTTaGCTGGCTATCTACAACAGC +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCTNTAG*LAIYNS
Trigger: GCTGTTGTAGATAGCCAGTCAACCAGCAGTATTAGT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGACAATTTGGTGGTACTaGAAATCTTACGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRTIWWY*KSYGEL
Trigger: TAACTCTCCGTAAGATTTTCAGTACCACCAAATTGT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACTGGTTGCATCGTCCATaGGTGGAAATTTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDWLHRP*VEILQF
Trigger: GAACTGTAAAATTTCCACTCATGGACGATGCAACCA...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAACAAGCAATTACAAATaGTGTAGCAAAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVTSNYK*CSKTVI
Trigger: GATAACCGTTTTGCTACAGCATTTGTAATTGCTTGT...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTG +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCGGLYQ*MFLGMV
Trigger: CACCATACCCAAAAACATGCATTGGTATAGCCCACC...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRNFSMN*SVSVKL
Trigger: GAGTTTCACACTAACTGAGCAGTTCATGGAGAAATT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNNFSMN*SVSVKL
Trigger: GAGTTTCACACTAACTGAGCAGTTCATGGAGAAATT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp ATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAATTTAATTTCTCCATGAACTaGTCAGTTAGTGTGAAACTC +
Preference number: 4 (lower is better)
Translates to: IGPKEINPAIVVSGINKFNFSMN*SVSVKL
Trigger: GAGTTTCACACTAACTGAGCAGTTCATGGAGAAATT...AAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEISFGK*KHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTAT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDISFGK*KHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTAT...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR GCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCGCAGTTTCTTGCTCATaGCACACGATATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIAVSCS*HTICLH
Trigger: ATGAAGGCATATCGTGTGGCATGAGCAAGAAACTGC...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGCAGTTTCTTGCTCATaGCACACGATATGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCAVSCS*HTICLH
Trigger: ATGAAGGCATATCGTGTGGCATGAGCAAGAAACTGC...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCTGTAGACAGACACAGTaGAGATACAAACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSICRQTQ*RYKQLP
Trigger: TGGCAGCTGTTTGTATCTGCACTGTGTCTGTCTACA...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTGTAGACAGACACAGTaGAGATACAAACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCCRQTQ*RYKQLP
Trigger: TGGCAGCTGTTTGTATCTGCACTGTGTCTGTCTACA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: VVGFPALEGHYGETFFIVGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTAGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: NACIDFFPGFLSPARSILGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATCAATCCCGCTATTGTaGTTTCCGGGATCAACAAAT +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAESIPLL*FPGSTN
Trigger: ATTTGTTGATCCCGGAAACCACAATAGCGGGATTGA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGGAGCTCTAGTTTCTaGTGGAGTAGTTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCGSSSF*WSSSIP
Trigger: TGGAATTGAACTACTCCACCAGAAACTAGAGCTCCC...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR CCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCGGGAGCTCTAGTTTCTaGTGGAGTAGTTCAATTCCA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIGSSSF*WSSSIP
Trigger: TGGAATTGAACTACTCCACCAGAAACTAGAGCTCCC...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAATACTGCTGGTTGACTaGCTATCTACAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEILLVD*LSTTAK
Trigger: CTTTGCTGTTGTAGATAGCCAGTCAACCAGCAGTAT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
3UTR CAA 72 bp AGGTCCCAATTTTCATCTTCTCAGAGATTGCATCTGTaGGTTGCATCGTCCATGAGTGGAAATTTTACAGTT +
Preference number: 4 (lower is better)
Translates to: RSQFSSSQRLHL*VASSMSGNFTV
Trigger: AACTGTAAAATTTCCACTCATGGACGATGCAACCAACAGATGCAATCTCTGAGAAGATGAAAATTGGGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR TCA 90 bp TTGTGGTTTCCGGGATCAACAAATTTCTCCATGAACTGCTCAGTTAGTGTGAAATCACTGGAATTTTCTTaGACTGGACTTCGATATTCA +
Preference number: 4 (lower is better)
Translates to: LWFPGSTNFSMNCSVSVKSLEFS*TGLRYS
Trigger: TGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGA...TTTCACACTAACTGAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR TCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAACTCACACATTTTGTaGCCACATCAAATGACTCTG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAENSHIL*PHQMTL
Trigger: CAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGACAAGCAATTACAAATaGTGTAGCAAAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRTSNYK*CSKTVI
Trigger: GATAACCGTTTTGCTACAGCATTTGTAATTGCTTGT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATACAAGCAATTACAAATaGTGTAGCAAAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNTSNYK*CSKTVI
Trigger: GATAACCGTTTTGCTACAGCATTTGTAATTGCTTGT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTCCACAATCCCACTGTaGCATTGTATCGAAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCSTIPL*HCIEKV
Trigger: CACTTTTTCGATACAATGGCACAGTGGGATTGTGGA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIISFGK*KHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTAT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAATTTTTGCACGAGCTaGAGAGGATTAAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAENFCTS*RGLSVL
Trigger: CAGAACACTTAATCCTCTGCAGCTCGTGCAAAAATT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAGTCAGCAGTGTACCGTaGACACATTTTAAATTACAG +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEVSSVP*THFKLQ
Trigger: CTGTAATTTAAAATGTGTGCACGGTACACTGCTGAC...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CCA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: SADTNSCHISPQMKLCVNGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAGCTCTAGTTTCTGGTaGAGTAGTTCAATTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSISSSFW*SSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTATACTGCTGGTTGACTaGCTATCTACAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCILLVD*LSTTAK
Trigger: CTTTGCTGTTGTAGATAGCCAGTCAACCAGCAGTAT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAATCACTGGAATTTTCTTaGACTGGACTTCGATATTCA +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAESLEFS*TGLRYS
Trigger: TGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGA...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTAATAAAGACCATAGTTaGAGGTTAATGGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCNKDHS*RLMDSQ
Trigger: CTGGCTGTCCATTAACCTCCAACTATGGTCTTTATT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
ENST00000513873.1
CDS-3UTR TCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCTCACTGGAATTTTCTTaGACTGGACTTCGATATTCA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSISLEFS*TGLRYS
Trigger: TGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGA...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR TCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTACAATTTGGTGGTACTaGAAATCTTACGGAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCTIWWY*KSYGEL
Trigger: TAACTCTCCGTAAGATTTTCAGTACCACCAAATTGT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAGAAGCTATGTGTCAATaGTTAGGGAAAATGATCTTA +
Preference number: 4 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEEAMCQ*LGKMIL
Trigger: TAAGATCATTTTCCCTAAGCATTGACACATAGCTTC...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTACAAGCAATTACAAATaGTGTAGCAAAACGGTTATC +
Preference number: 4 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCTSNYK*CSKTVI
Trigger: GATAACCGTTTTGCTACAGCATTTGTAATTGCTTGT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR GCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCGAAGCTATGTGTCAATaGTTAGGGAAAATGATCTTA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIEAMCQ*LGKMIL
Trigger: TAAGATCATTTTCCCTAAGCATTGACACATAGCTTC...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CCA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCGGAATTTTCTTGAACTaGACTTCGATATTCATACCA +
Preference number: 4 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIGIFLN*TSIFIP
Trigger: TGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCC...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS GCA 90 bp AAGGGTCCCAGCACTGGGAACGGCGGTTCGTCCAAGCCGGACGCCTaGAGCAGCCACCTCCTGGGCCTCACGGCGGGGCCGGAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: KGPSTGNGGSSKPDA*SSHLLGLTAGPEKA
Trigger: GGCCTTCTCCGGCCCCGCCGTGAGGCCCAGGAGGTGGCTGCTGCAGGCGTCCGGCTTGGACGAACCGCCGTTCCCAGTGCTGGGACCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507944.5
ENST00000513287.5
ENST00000514537.5
CDS TCA 90 bp GCCACACGATATGCCTTCATTAAGGTGTACTCTTTCCGGTTGGTGTaGGCAGCCCAGATGAAGAGAGCAGAAGCCATGAACTGTAAGGGA +
Preference number: 5 (lower is better)
Translates to: ATRYAFIKVYSFRLV*AAQMKRAEAMNCKG
Trigger: TCCCTTACAGTTCATGGCTTCTGCTCTCTTCATCTGGGCTGCTCACACCAACCGGAAAGAGTACACCTTAATGAAGGCATATCGTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000506927.1
ENST00000510545.5
ENST00000511081.5
ENST00000513287.5
CDS TCA 90 bp GCAGTAGTAAATGGCCGCGGTAAAATGACTCAAGGCAGATCGCGCTaGGTCAAATACTACACGGCAAGTATACACCGTGACCGCACCAAA +
Preference number: 5 (lower is better)
Translates to: AVVNGRGKMTQGRSR*VKYYTASIHRDRTK
Trigger: TTTGGTGCGGTCACGGTGTATACTTGCCGTGTAGTATTTGACTCAGCGCGATCTGCCTTGAGTCATTTTACCGCGGCCATTTACTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS CCA 90 bp TGCTCTCCTTTGTCACTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAAGTCCGATCA +
Preference number: 5 (lower is better)
Translates to: CSPLSLQGDGECPWQ*WDISFGKCKHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGACAAAGGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS CCA 90 bp GAAGCATGCTCTCCTTTGTCACTGCAAGGAGATGGAGAATGCCCGTaGCAATGGTGGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: EACSPLSLQGDGECP*QWWDISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGACAAAGGAGAGCATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CAA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCG +
Preference number: 5 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSTETEV*FSSLSP
Trigger: CGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394181.6
CDS CCA 90 bp TCTCCTTTGTCACTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTCCGATCAAAG +
Preference number: 5 (lower is better)
Translates to: SPLSLQGDGECPWQW*DISFGKCKHKVRSK
Trigger: CTTTGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGACAAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS CCA 90 bp GACAAAACCTACCTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTCCGATCAAAG +
Preference number: 5 (lower is better)
Translates to: DKTYLQGDGECPWQW*DISFGKCKHKVRSK
Trigger: CTTTGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTAGGTTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS CCA 90 bp GATGACAAAACCTACCTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAAGTCCGATCA +
Preference number: 5 (lower is better)
Translates to: DDKTYLQGDGECPWQ*WDISFGKCKHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTAGGTTTTGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS CCA 90 bp TATAGTACTGGGCTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTCCGATCAAAG +
Preference number: 5 (lower is better)
Translates to: YSTGLQGDGECPWQW*DISFGKCKHKVRSK
Trigger: CTTTGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGCCCAGTACTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS CCA 90 bp CTTTATAGTACTGGGCTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAAGTCCGATCA +
Preference number: 5 (lower is better)
Translates to: LYSTGLQGDGECPWQ*WDISFGKCKHKVRS
Trigger: TGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGCCCAGTACTATAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS-3UTR CAA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACA +
Preference number: 5 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSRSIPL*WFPGST
Trigger: TGTTGATCCCGGAAACCACAATAGCGGGATTGATCT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CTGGCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCT +
Preference number: 5 (lower is better)
Translates to: LATPKIGPKEINPAIVVSTETEV*FSSLSP
Trigger: AGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGT...GGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CAA 90 bp AAGGAACTGGCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACA +
Preference number: 5 (lower is better)
Translates to: KELATPKIGPKEINPAIVRSIPL*WFPGST
Trigger: TGTTGATCCCGGAAACCACAATAGCGGGATTGATCT...CACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAGTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CAA 90 bp ATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCAAATTCACCGGATACATaGTCAGGGAGCTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: MDSQNFRSCGRFPSSGGSNSPDT*SGSSSF
Trigger: GAAACTAGAGCTCCCTGACAATGTATCCGGTGAATT...TGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCACTCGCAAACTGGGGTaGCTGAGTTTGGAAAATGGG +
Preference number: 5 (lower is better)
Translates to: LDLVVGFPALEGHYGETFTRKLG*LSLENG
Trigger: CCCATTTTCCAAACTCAGCAACCCCAGTTTGCGAGT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS GCA 90 bp GTGACCACATCAAATGACTCTGTCCTTTCTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTGATACACCGTCTCCACAATCCCACT +
Preference number: 5 (lower is better)
Translates to: VTTSNDSVLSGGLYQ*MFLGMVIHRLHNPT
Trigger: AGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGAGTCATTTGATGTGGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000503004.5
ENST00000503621.5
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS GCA 90 bp AAAGGTAAGTATGATGACAAAACCTACCTGCAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGATATAAGCTTCGGCAAATGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: KGKYDDKTYLQGDGE*PWQWWDISFGKCKH
Trigger: GTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTAGGTTTTGTCATCATACTTACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS GCA 90 bp CTGGAACAAGAACAATTGCCTGTCCTTTCTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTGATACACCGTCTCCACAATCCCACT +
Preference number: 5 (lower is better)
Translates to: LEQEQLPVLSGGLYQ*MFLGMVIHRLHNPT
Trigger: AGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGGCAATTGTTCTTGTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS GCA 90 bp CTGAACCTCCTCAACAGAAATCTTGCTCTCTCCCTAAATCCTCAGTaGAACATACGTCCGCAAAAACTAAATGATCCCTCCTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LNLLNRNLALSLNPQ*NIRPQKLNDPSSAR
Trigger: TCTGGCTGAGGAGGGATCATTTAGTTTTTGCGGACGTATGTTGCACTGAGGATTTAGGGAGAGAGCAAGATTTCTGTTGAGGAGGTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS CCA 90 bp AAGTATGATGACAAAACCTACCTGCAAGGAGATGGAGAATGCCCGTaGCAATGGTGGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: KYDDKTYLQGDGECP*QWWDISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTAGGTTTTGTCATCATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS-3UTR CAA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCAAAGCAGGCAGTTTCTaGCTCATGCCACACGATATG +
Preference number: 5 (lower is better)
Translates to: LDLVVGFPALEGHYGETFKAGSF*LMPHDM
Trigger: CATATCGTGTGGCATGAGCAAGAAACTGCCTGCTTT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCT +
Preference number: 5 (lower is better)
Translates to: LDLVVGFPALEGHYGETFTETEV*FSSLSP
Trigger: AGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATGAAGCATGCTCTCCTTaGTCACTGCAAGGAGATGGA +
Preference number: 5 (lower is better)
Translates to: WWCVLGVCISARCHFTMHEACSP*SLQGDG
Trigger: TCCATCTCCTTGCAGTGACAAAGGAGAGCATGCTTC...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CAA 90 bp GAGATCAATCCCGCTATTGTGGTTTCCGGGATCAACAAATTTCTCCATGAACTGCTGGAACAAGAACAATaGCCTGTCCTTTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: EINPAIVVSGINKFLHELLEQEQ*PVLSGG
Trigger: CCCACCAGAAAGGACAGGCAATTGTTCTTGTTCCAG...CAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS TCA 90 bp CTGTCCTTTCTGGTGGGCTATACCAATGCATGTTTTTGGGTATGGTaGTACACCGTCTCCACAATCCCACTGTGCCATTGTATCGAAAAA +
Preference number: 5 (lower is better)
Translates to: LSFLVGYTNACFWVW*YTVSTIPLCHCIEK
Trigger: TTTTTCGATACAATGGCACAGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 24 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503621.5
ENST00000503799.5
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS TCA 90 bp TTTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACTGGGCTGCAAGGAGATGGAGAATGC +
Preference number: 5 (lower is better)
Translates to: FRSCGRFPSSGGSLW*NVLYSTGLQGDGEC
Trigger: GCATTCTCCATCTCCTTGCAGCCCAGTACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS GCA 90 bp AACTGGACTTCGATATTCATACCAGAAGTCTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTAC +
Preference number: 5 (lower is better)
Translates to: NWTSIFIPEVCANGG*HVDGGNEAKHTSNY
Trigger: GTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATGGCAGCCTCCATTGGCACAGACTTCTGGTATGAATATCGAAGTCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503799.5
ENST00000506575.1
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS GCA 90 bp TTTGTGACCACATCAAATGACTCAGAAGTCTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTAC +
Preference number: 5 (lower is better)
Translates to: FVTTSNDSEVCANGG*HVDGGNEAKHTSNY
Trigger: GTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATGGCAGCCTCCATTGGCACAGACTTCTGAGTCATTTGATGTGGTCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510541.5
ENST00000512147.5
CDS-3UTR CAA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACA +
Preference number: 5 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPRSIPL*WFPGST
Trigger: TGTTGATCCCGGAAACCACAATAGCGGGATTGATCT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp TTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACA +
Preference number: 5 (lower is better)
Translates to: LNACIDFFPGFLSPARSIRSIPL*WFPGST
Trigger: TGTTGATCCCGGAAACCACAATAGCGGGATTGATCT...AATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CAA 90 bp GTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCTTTATAGTAAAAGCAGGCAGTTTCTaGCTCATGCCACACGATATG +
Preference number: 5 (lower is better)
Translates to: VVGFPALEGHYGETFFIVKAGSF*LMPHDM
Trigger: CATATCGTGTGGCATGAGCAAGAAACTGCCTGCTTT...TACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCT +
Preference number: 5 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPTETEV*FSSLSP
Trigger: AGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATCAGAGATTGCATCTGTaGGTTGCATCGTCCATGAGT +
Preference number: 5 (lower is better)
Translates to: WWCVLGVCISARCHFTMHQRLHL*VASSMS
Trigger: ACTCATGGACGATGCAACCAACAGATGCAATCTCTG...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS GCA 90 bp CATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTACAAATaGTGTAGCAAAACGGTTATCCATTCTGGCATTCAGACTGCTCGC +
Preference number: 5 (lower is better)
Translates to: HVDGGNEAKHTSNYK*CSKTVIHSGIQTAR
Trigger: GCGAGCAGTCTGAATGCCAGAATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341181.11
ENST00000502980.1
ENST00000507411.5
ENST00000512147.5
ENST00000513988.1
CDS GCA 90 bp ACTCTCCCGATTCCTTATACTTCTGAACCTCCTCAACAGAAATCTTaGTCTCTCCCTAAATCCTCAGTGCAACATACGTCCGCAAAAACT +
Preference number: 5 (lower is better)
Translates to: TLPIPYTSEPPQQKS*SLPKSSVQHTSAKT
Trigger: AGTTTTTGCGGACGTATGTTGCACTGAGGATTTAGGGAGAGAGCAAGATTTCTGTTGAGGAGGTTCAGAAGTATAAGGAATCGGGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS GCA 90 bp CATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTACAAATaGTGTAGCAAAACGGTTATCCATTCTGGCATTCAGACGCCCATC +
Preference number: 5 (lower is better)
Translates to: HVDGGNEAKHTSNYK*CSKTVIHSGIQTPI
Trigger: GATGGGCGTCTGAATGCCAGAATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508902.5
CDS-3UTR CAA 90 bp CTGGCAACGCCAAAGATAGGTCCTAAGGAGATCAATCCCGCTATTGTGGTTTCCATCACTGGAATTTTCTaGAACTGGACTTCGATATTC +
Preference number: 5 (lower is better)
Translates to: LATPKIGPKEINPAIVVSITGIF*NWTSIF
Trigger: GAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGAT...GGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CAA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACA +
Preference number: 5 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRRSIPL*WFPGST
Trigger: TGTTGATCCCGGAAACCACAATAGCGGGATTGATCT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAAAGCAGGCAGTTTCTaGCTCATGCCACACGATATG +
Preference number: 5 (lower is better)
Translates to: SADTNSCHISPQMKLCVNKAGSF*LMPHDM
Trigger: CATATCGTGTGGCATGAGCAAGAAACTGCCTGCTTT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp TGGTGGTGTGTTTTGGGGGTGTGTATTTCTGCTAGATGCCATTTCACTATGCATTCATCTTCTCAGAGATaGCATCTGTTGGTTGCATCG +
Preference number: 5 (lower is better)
Translates to: WWCVLGVCISARCHFTMHSSSQR*HLLVAS
Trigger: CGATGCAACCAACAGATGCAATCTCTGAGAAGATGA...ATGCATAGTGAAATGGCATCTAGCAGAAATACACACCCCCAAAACACACCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS GCA 90 bp CATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTACAAATaGTGTAGCAAAACGGTTATCCATTCTGGCATTCAGACTGCTCCA +
Preference number: 5 (lower is better)
Translates to: HVDGGNEAKHTSNYK*CSKTVIHSGIQTAP
Trigger: TGGAGCAGTCTGAATGCCAGAATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000503799.5
ENST00000506575.1
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000510541.5
ENST00000514537.5
CDS GCA 90 bp CATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTACAAATaGTGTAGCAAAACGGTTATCCATTCTGGCATTCAGACCAGGATG +
Preference number: 5 (lower is better)
Translates to: HVDGGNEAKHTSNYK*CSKTVIHSGIQTRM
Trigger: CATCCTGGTCTGAATGCCAGAATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000502299.5
ENST00000508659.5
ENST00000510545.5
ENST00000513452.5
ENST00000515620.5
CDS-3UTR CAA 90 bp CATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGTTTCCCAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: HSWRLMDSQNFRSCGRFPNPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...GGGAAACCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CCGCTATTGTGGTTTCCGGGATCAACAAATTTCTCCATGAACTGCTCAGTTAGTAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: PLLWFPGSTNFSMNCSVSNPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...ACTAACTGAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS-3UTR CAA 90 bp ATTTTAAATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: ILNACIDFFPGFLSPARSNPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...TGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATTTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS-3UTR CAA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAATTCACCGGATACATaGTCAGGGAGCTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: SADTNSCHISPQMKLCVNNSPDT*SGSSSF
Trigger: GAAACTAGAGCTCCCTGACAATGTATCCGGTGAATT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAATTCACCGGATACATaGTCAGGGAGCTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRNSPDT*SGSSSF
Trigger: GAAACTAGAGCTCCCTGACAATGTATCCGGTGAATT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AATGCCTGCATTGACTTCTTCCCTGGTTTCCTGAGTCCAGCTAGGTCAATTTTATTCAGGGAAGTAGATTaGTCTTTTCCTCCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: NACIDFFPGFLSPARSILFREVD*SFPPGN
Trigger: ATTCCCTGGAGGAAAAGACAAATCTACTTCCCTGAA...TAAAATTGACCTAGCTGGACTCAGGAAACCAGGGAAGAAGTCAATGCAGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS GCA 90 bp CAATCTCTCCCTAATCCATTAAAGCTAAGCCAAGCTTCTTTACGCTaGCAAATGCTTCACTCCTATCTACTCTCCCGATTCCTTATACTT +
Preference number: 5 (lower is better)
Translates to: QSLPNPLKLSQASLR*QMLHSYLLSRFLIL
Trigger: AAGTATAAGGAATCGGGAGAGTAGATAGGAGTGAAGCATTTGGCAGCGTAAAGAAGCTTGGCTTAGCTTTAATGGATTAGGGAGAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS GCA 90 bp GTTAAAATAAGAGAAATACCTGTCCTTTCTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTGATACACCGTCTCCACAATCCCACT +
Preference number: 5 (lower is better)
Translates to: VKIREIPVLSGGLYQ*MFLGMVIHRLHNPT
Trigger: AGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGGTATTTCTCTTATTTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502980.1
CDS GCA 90 bp CATGTAGATGGTGGAAATGAGGCTAAGCACACAAGCAATTACAAATaGTGTAGCAAAACGGTTATCCATTCTGGCATTCAGACTGCTCTT +
Preference number: 5 (lower is better)
Translates to: HVDGGNEAKHTSNYK*CSKTVIHSGIQTAL
Trigger: AAGAGCAGTCTGAATGCCAGAATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513287.5
CDS CCA 90 bp AAATCAAAGTACTCACAGGTCCTAAGGAGATCAATCCCGCTATTGTaGTTTCCGGGATCAACAAATTTCTCCATGAACTGCTCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: KSKYSQVLRRSIPLL*FPGSTNFSMNCSVS
Trigger: ACTAACTGAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTGTGAGTACTTTGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513988.1
CDS-3UTR CAA 90 bp TTAGATCTTGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTGAAACGTTCATCACTGGAATTTTCTaGAACTGGACTTCGATATTC +
Preference number: 5 (lower is better)
Translates to: LDLVVGFPALEGHYGETFITGIF*NWTSIF
Trigger: GAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGAT...GAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACAAGATCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: SADTNSCHISPQMKLCVNNPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAAAGCAGGCAGTTTCTaGCTCATGCCACACGATATG +
Preference number: 5 (lower is better)
Translates to: VLKILRRVKNNTNPRPAEKAGSF*LMPHDM
Trigger: CATATCGTGTGGCATGAGCAAGAAACTGCCTGCTTT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AGTATGCAAGGTAGGATTCAACTACTATCAGGAGGAAAGATGGGAAATTTTGACACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCT +
Preference number: 5 (lower is better)
Translates to: SMQGRIQLLSGGKMGNFDTETEV*FSSLSP
Trigger: AGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGT...GTCAAAATTTCCCATCTTTCCTCCTGATAGTAGTTGAATCCTACCTTGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS CCA 90 bp TTCATCCCAGATGCTTTTATTCAAATCACTGGAATTTTCTTGAACTaGACTTCGATATTCATACCAGAAGTCTGTGCCAATGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: FIPDAFIQITGIFLN*TSIFIPEVCANGGC
Trigger: GCAGCCTCCATTGGCACAGACTTCTGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGATTTGAATAAAAGCATCTGGGATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 24 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503621.5
ENST00000503799.5
ENST00000506575.1
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS-3UTR CAA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAATTCACCGGATACATaGTCAGGGAGCTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: VLKILRRVKNNTNPRPAENSPDT*SGSSSF
Trigger: GAAACTAGAGCTCCCTGACAATGTATCCGGTGAATT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAAAGCAGGCAGTTTCTaGCTCATGCCACACGATATG +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIKAGSF*LMPHDM
Trigger: CATATCGTGTGGCATGAGCAAGAAACTGCCTGCTTT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTGGTAGGAGTGAACATAAAGTTTaGACGATGAGAGGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KDHSWRLMDSQNFRSCGRSEHKV*TMRGFP
Trigger: TGGGAAACCTCTCATCGTCAAAACTTTATGTTCACT...CCTACCACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCT +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSITETEV*FSSLSP
Trigger: AGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS GCA 90 bp GATACACCGTCTCCACAATCCCACTGTGCCATTGTATCGAAAAAGTaGATCATTATAAGTCTTTTCATCTGCCTCATCACTAATGAATTC +
Preference number: 5 (lower is better)
Translates to: DTPSPQSHCAIVSKK*IIISLFICLITNEF
Trigger: GAATTCATTAGTGATGAGGCAGATGAAAAGACTTATAATGATGCACTTTTTCGATACAATGGCACAGTGGGATTGTGGAGACGGTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 25 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503621.5
ENST00000503799.5
ENST00000506575.1
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS-3UTR CAA 90 bp AGTGCAGATACAAACAGCTGCCATATCTCACCTCAGATGAAGCTATGTGTCAATATCACTGGAATTTTCTaGAACTGGACTTCGATATTC +
Preference number: 5 (lower is better)
Translates to: SADTNSCHISPQMKLCVNITGIF*NWTSIF
Trigger: GAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGAT...ATTGACACATAGCTTCATCTGAGGTGAGATATGGCAGCTGTTTGTATCTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp GTACTGAAAATCTTACGGAGAGTTAAAAATAATACTAATCCTCGCCCGGCTGAAAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: VLKILRRVKNNTNPRPAENPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...TTCAGCCGGGCGAGGATTAGTATTATTTTTAACTCTCCGTAAGATTTTCAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAATTCACCGGATACATaGTCAGGGAGCTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSINSPDT*SGSSSF
Trigger: GAAACTAGAGCTCCCTGACAATGTATCCGGTGAATT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSINPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTAATCCCACTGTGCCATaGTATCGAAAAAGTGCATCA +
Preference number: 5 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCNPTVP*YRKSAS
Trigger: TGATGCACTTTTTCGATACAATGGCACAGTGGGATT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCTTACAGACTGAATTTTaGCACGAGCTGCAGAGGATT +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSILQTEF*HELQRI
Trigger: AATCCTCTGCAGCTCGTGCAAAAATTCAGTCTGTAA...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CAA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTTTATAGTACTGGGATaGTCAGGGAGCTCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCFIVLG*SGSSSF
Trigger: GAAACTAGAGCTCCCTGACAATCCCAGTACTATAAA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513873.1
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCAGTGAACATAAAGTTTaGACGATGAGAGGTTTCCCA +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSISEHKV*TMRGFP
Trigger: TGGGAAACCTCTCATCGTCAAAACTTTATGTTCACT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTTTAAGTGTTCTGGGTTaGAGTGTTAAAAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCLSVLG*SVKKAQ
Trigger: CTGTGCCTTTTTAACACTCAAACCCAGAACACTTAA...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS-3UTR CAA 90 bp CGGTCACATTCCTACTCCCAATTTTCTTTCATAAATTTGTGTCAAGTCTCTATCATCACTGGAATTTTCTaGAACTGGACTTCGATATTC +
Preference number: 5 (lower is better)
Translates to: RSHSYSQFSFINLCQVSIITGIF*NWTSIF
Trigger: GAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGAT...GATAGAGACTTGACACAAATTTATGAAAGAAAATTGGGAGTAGGAATGTGACCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS-3UTR CAA 90 bp AGAAATAAAGACCATAGTTGGAGGTTAATGGACAGCCAGAACTTTAGATCTTGTATCACTGGAATTTTCTaGAACTGGACTTCGATATTC +
Preference number: 5 (lower is better)
Translates to: RNKDHSWRLMDSQNFRSCITGIF*NWTSIF
Trigger: GAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGAT...ACAAGATCTAAAGTTCTGGCTGTCCATTAACCTCCAACTATGGTCTTTATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000510545.5
CDS GCA 72 bp CCCTACTCTCCCCGCGCCTCCTCTGACGCACTTCCCTaGAGAGCCCGCCCCCTCCATAACTCCCGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PYSPRASSDALP*RARPLHNSRAS
Trigger: GGAGGCGCGGGAGTTATGGAGGGGGCGGGCTCTGCAGGGAAGTGCGTCAGAGGAGGCGCGGGGAGAGTAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000508902.5
CDS CCA 72 bp TCTGGCATTCAGACTGCTCTTAAAGGGTCCCAGCACTaGGAACGGCGGTTCGTCCAAGCCGGACGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SGIQTALKGSQH*ERRFVQAGRLQ
Trigger: CTGCAGGCGTCCGGCTTGGACGAACCGCCGTTCCCAGTGCTGGGACCCTTTAAGAGCAGTCTGAATGCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513287.5
CDS CCA 72 bp TGTTCTCTAGTCTATCACCTTAAAGGGTCCCAGCACTaGGAACGGCGGTTCGTCCAAGCCGGACGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: CSLVYHLKGSQH*ERRFVQAGRLQ
Trigger: CTGCAGGCGTCCGGCTTGGACGAACCGCCGTTCCCAGTGCTGGGACCCTTTAAGGTGATAGACTAGAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507944.5
ENST00000515620.5
CDS CAA 72 bp TTCAGACTGCTCCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCGCCCATCCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: FRLLQDATETEV*FSSLSPPILLL
Trigger: GAGCAGGAGGATGGGCGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGAGCAGTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394181.6
ENST00000508503.5
CDS CAA 72 bp TGGCATTCAGACCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCGCCCATCCTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: WHSDQDATETEV*FSSLSPPILLL
Trigger: GAGCAGGAGGATGGGCGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGTCTGAATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508659.5
CDS CAA 90 bp ATTCTGGCATTCAGACTGCTCCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACGCCCATCCTCCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: ILAFRLLQDATETEV*FSSLSPAYAHPPAP
Trigger: CGGAGCAGGAGGATGGGCGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394180.6
ENST00000503799.5
ENST00000510541.5
CDS CCA 72 bp GGGCTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: GLQGDGECPWQW*DISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS CAA 72 bp TTCAGACTGCTCCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCGCCGGGAACATGGAAC +
Preference number: 6 (lower is better)
Translates to: FRLLQDATETEV*FSSLSPPGTWN
Trigger: GTTCCATGTTCCCGGCGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGAGCAGTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508071.1
CDS CAA 90 bp TATCCATTCTGGCATTCAGACCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACGCCCATCCTCCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: YPFWHSDQDATETEV*FSSLSPAYAHPPAP
Trigger: CGGAGCAGGAGGATGGGCGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGTCTGAATGCCAGAATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502299.5
CDS GCA 72 bp TGCCCGTGGCAATGGTGGGATATAAGCTTCGGCAAATaGAAGCACAAAGTCCGATCAAAGCCCCAAAGCACA +
Preference number: 6 (lower is better)
Translates to: CPWQWWDISFGK*KHKVRSKPQST
Trigger: TGTGCTTTGGGGCTTTGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502288.5
ENST00000502299.5
ENST00000503004.5
ENST00000506885.5
ENST00000506927.1
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508902.5
ENST00000510541.5
ENST00000510545.5
ENST00000511081.5
ENST00000511667.5
ENST00000512147.5
ENST00000513287.5
ENST00000513452.5
ENST00000513873.1
ENST00000514537.5
ENST00000515620.5
CDS GCA 72 bp GCATGCTCTCCTTTGTCACTGCAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGATATAAGCTTCGGCAAA +
Preference number: 6 (lower is better)
Translates to: ACSPLSLQGDGE*PWQWWDISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGACAAAGGAGAGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS CCA 72 bp GACCTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: DLQGDGECPWQW*DISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000503004.5
ENST00000506927.1
ENST00000508902.5
ENST00000510541.5
ENST00000510545.5
ENST00000511081.5
ENST00000511667.5
ENST00000512147.5
ENST00000513287.5
ENST00000513452.5
ENST00000513873.1
ENST00000514537.5
CDS CCA 72 bp ACTGGGCTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: TGLQGDGECPWQ*WDISFGKCKHK
Trigger: TTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS CAA 72 bp TTCAGACTGCTCCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACGCCCATCCT +
Preference number: 6 (lower is better)
Translates to: FRLLQDATETEV*FSSLSPAYAHP
Trigger: AGGATGGGCGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGAGCAGTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394180.6
ENST00000503799.5
ENST00000510541.5
CDS CAA 72 bp TGGCATTCAGACCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACGCCCATCCT +
Preference number: 6 (lower is better)
Translates to: WHSDQDATETEV*FSSLSPAYAHP
Trigger: AGGATGGGCGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGTCTGAATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502299.5
CDS TCA 72 bp AATGGCCGCGGTAAAATGACTCAAGGCAGATCGCGCTaGGTCAAATACTACACGGCAAGTATACACCGTGAC +
Preference number: 6 (lower is better)
Translates to: NGRGKMTQGRSR*VKYYTASIHRD
Trigger: GTCACGGTGTATACTTGCCGTGTAGTATTTGACTCAGCGCGATCTGCCTTGAGTCATTTTACCGCGGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS CCA 72 bp TCACTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: SLQGDGECPWQW*DISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS CCA 72 bp TACCTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: YLQGDGECPWQW*DISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS CCA 72 bp ACCTACCTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: TYLQGDGECPWQ*WDISFGKCKHK
Trigger: TTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS CCA 72 bp TATAGTACTGGGCTGCAAGGAGATGGAGAATGCCCGTaGCAATGGTGGGATATAAGCTTCGGCAAATGCAAG +
Preference number: 6 (lower is better)
Translates to: YSTGLQGDGECP*QWWDISFGKCK
Trigger: CTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGCCCAGTACTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS CAA 90 bp GAGACACAAGCCAGGCAGAAGGACCATCCAAATTCACCGGATACATaGTCAGGGAGCTCTAGTTTCTGGTGGAGTAGTTCAATTCCAGCA +
Preference number: 6 (lower is better)
Translates to: ETQARQKDHPNSPDT*SGSSSFWWSSSIPA
Trigger: TGCTGGAATTGAACTACTCCACCAGAAACTAGAGCTCCCTGACAATGTATCCGGTGAATTTGGATGGTCCTTCTGCCTGGCTTGTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000503004.5
ENST00000506927.1
ENST00000508902.5
ENST00000510545.5
ENST00000511081.5
ENST00000511667.5
ENST00000512147.5
ENST00000513287.5
ENST00000513452.5
CDS CAA 90 bp ATTCTGGCATTCAGACTGCTCCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACTTAAAGGGTCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: ILAFRLLQDATETEV*FSSLSPAYLKGPST
Trigger: AGTGCTGGGACCCTTTAAGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGAGCAGTCTGAATGCCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514537.5
CDS TCA 72 bp CTGGTGGGCTATACCAATGCATGTTTTTGGGTATGGTaGTACACCGTCTCCACAATCCCACTGTGCCATTGT +
Preference number: 6 (lower is better)
Translates to: LVGYTNACFWVW*YTVSTIPLCHC
Trigger: ACAATGGCACAGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 24 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503621.5
ENST00000503799.5
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS TCA 72 bp TATGCCTTCATTAAGGTGTACTCTTTCCGGTTGGTGTaGGCAGCCCAGATGAAGAGAGCAGAAGCCATGAAC +
Preference number: 6 (lower is better)
Translates to: YAFIKVYSFRLV*AAQMKRAEAMN
Trigger: GTTCATGGCTTCTGCTCTCTTCATCTGGGCTGCTCACACCAACCGGAAAGAGTACACCTTAATGAAGGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000503004.5
ENST00000506927.1
ENST00000510545.5
ENST00000511081.5
ENST00000513287.5
CDS GCA 72 bp GTTCTTTATAGTACTGGGCTGCAAGGAGATGGAGAATaGCCGTGGCAATGGTGGGATATAAGCTTCGGCAAA +
Preference number: 6 (lower is better)
Translates to: VLYSTGLQGDGE*PWQWWDISFGK
Trigger: TTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGCCCAGTACTATAAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS CCA 72 bp TTGTCACTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: LSLQGDGECPWQ*WDISFGKCKHK
Trigger: TTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507874.5
CDS CCA 72 bp TTTCTGCAAGGAGATGGAGAATGCCCGTGGCAATGGTaGGATATAAGCTTCGGCAAATGCAAGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: FLQGDGECPWQW*DISFGKCKHKV
Trigger: GACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502288.5
CDS CAA 72 bp CCTGTCCTTTCTGGTGGGCTATACCAATGCATGTTTTaGGGTATGGTGATACACCGTCTCCACAATCCCACT +
Preference number: 6 (lower is better)
Translates to: PVLSGGLYQCMF*GMVIHRLHNPT
Trigger: AGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502980.1
ENST00000503799.5
CDS CAA 90 bp GAACAATTGCCTGTCCTTTCTGGTGGGCTATACCAATGCATGTTTTaGGGTATGGTGATACACCGTCTCCACAATCCCACTGTGCCATTG +
Preference number: 6 (lower is better)
Translates to: EQLPVLSGGLYQCMF*GMVIHRLHNPTVPL
Trigger: CAATGGCACAGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGGCAATTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS CAA 90 bp TATCCATTCTGGCATTCAGACCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACTTAAAGGGTCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: YPFWHSDQDATETEV*FSSLSPAYLKGPST
Trigger: AGTGCTGGGACCCTTTAAGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGTCTGAATGCCAGAATGGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513452.5
CDS CAA 90 bp TCAAATGACTCTGTCCTTTCTGGTGGGCTATACCAATGCATGTTTTaGGGTATGGTGATACACCGTCTCCACAATCCCACTGTGCCATTG +
Preference number: 6 (lower is better)
Translates to: SNDSVLSGGLYQCMF*GMVIHRLHNPTVPL
Trigger: CAATGGCACAGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGAGTCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000503004.5
ENST00000503621.5
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS CAA 90 bp AGAGAAATACCTGTCCTTTCTGGTGGGCTATACCAATGCATGTTTTaGGGTATGGTGATACACCGTCTCCACAATCCCACTGTGCCATTG +
Preference number: 6 (lower is better)
Translates to: REIPVLSGGLYQCMF*GMVIHRLHNPTVPL
Trigger: CAATGGCACAGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGGTATTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502980.1
CDS TCA 72 bp TGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACTGGGCTGCAAGGAGAT +
Preference number: 6 (lower is better)
Translates to: CGRFPSSGGSLW*NVLYSTGLQGD
Trigger: ATCTCCTTGCAGCCCAGTACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506885.5
CDS TCA 72 bp TGTGGTAGGTTTCCCAGCTCTGGAGGGTCATTATGGTaGAACGTTCTTTATAGTACTGGGATTGTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: CGRFPSSGGSLW*NVLYSTGIVRE
Trigger: CTCCCTGACAATCCCAGTACTATAAAGAACGTTTCACCATAATGACCCTCCAGAGCTGGGAAACCTACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513873.1
CDS GCA 72 bp TCGATATTCATACCAGAAGTCTGTGCCAATGGAGGCTaGCATGTAGATGGTGGAAATGAGGCTAAGCACACA +
Preference number: 6 (lower is better)
Translates to: SIFIPEVCANGG*HVDGGNEAKHT
Trigger: TGTGTGCTTAGCCTCATTTCCACCATCTACATGGCAGCCTCCATTGGCACAGACTTCTGGTATGAATATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503799.5
ENST00000506575.1
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS GCA 72 bp GAACAATTGCCTGTCCTTTCTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTGATACACCGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: EQLPVLSGGLYQ*MFLGMVIHRLH
Trigger: GTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGGCAATTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503799.5
CDS CCA 72 bp AGTTTTCTGCAAGGAGATGGAGAATGCCCGTGGCAATaGTGGGATATAAGCTTCGGCAAATGCAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: SFLQGDGECPWQ*WDISFGKCKHK
Trigger: TTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502288.5
CDS CAA 72 bp TCTGTCCTTTCTGGTGGGCTATACCAATGCATGTTTTaGGGTATGGTGATACACCGTCTCCACAATCCCACT +
Preference number: 6 (lower is better)
Translates to: SVLSGGLYQCMF*GMVIHRLHNPT
Trigger: AGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000503004.5
ENST00000503621.5
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS CAA 72 bp TTCAGACTGCTCCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACTTAAAGGGT +
Preference number: 6 (lower is better)
Translates to: FRLLQDATETEV*FSSLSPAYLKG
Trigger: ACCCTTTAAGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGAGCAGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514537.5
CDS CAA 72 bp TGGCATTCAGACCAGGATGCTACGGAGACAGAGGTCTaGTTCTCTAGTCTATCACCTGCATACTTAAAGGGT +
Preference number: 6 (lower is better)
Translates to: WHSDQDATETEV*FSSLSPAYLKG
Trigger: ACCCTTTAAGTATGCAGGTGATAGACTAGAGAACAAGACCTCTGTCTCCGTAGCATCCTGGTCTGAATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513452.5
CDS TCA 72 bp AAGAAGCAGTGGAAATTGGCTTCTCCCAGTTTCCTCTaGAGAGGGAAGCCTCCTAAAACAAAGGTAAGAGTC +
Preference number: 6 (lower is better)
Translates to: KKQWKLASPSFL*RGKPPKTKVRV
Trigger: GACTCTTACCTTTGTTTTAGGAGGCTTCCCTCTTCAGAGGAAACTGGGAGAAGCCAATTTCCACTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS GCA 72 bp TCAAATGACTCTGTCCTTTCTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTGATACACCGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: SNDSVLSGGLYQ*MFLGMVIHRLH
Trigger: GTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGAGTCATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000503004.5
ENST00000503621.5
ENST00000506885.5
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510545.5
ENST00000511667.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS GCA 72 bp AGAGAAATACCTGTCCTTTCTGGTGGGCTATACCAATaGATGTTTTTGGGTATGGTGATACACCGTCTCCAC +
Preference number: 6 (lower is better)
Translates to: REIPVLSGGLYQ*MFLGMVIHRLH
Trigger: GTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGGTATTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502980.1
CDS CCA 72 bp TACTCACAGGTCCTAAGGAGATCAATCCCGCTATTGTaGTTTCCGGGATCAACAAATTTCTCCATGAACTGC +
Preference number: 6 (lower is better)
Translates to: YSQVLRRSIPLL*FPGSTNFSMNC
Trigger: GCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTGTGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513988.1
CDS CAA 72 bp AAGTACTCACAGGTCCTAAGGAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACAAATTTCTCCATGAAC +
Preference number: 6 (lower is better)
Translates to: KYSQVLRRSIPL*WFPGSTNFSMN
Trigger: GTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTGTGAGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513988.1
CDS CAA 90 bp GTGAAATCAAAGTACTCACAGGTCCTAAGGAGATCAATCCCGCTATaGTGGTTTCCGGGATCAACAAATTTCTCCATGAACTGCTCAGTT +
Preference number: 6 (lower is better)
Translates to: VKSKYSQVLRRSIPL*WFPGSTNFSMNCSV
Trigger: AACTGAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTGTGAGTACTTTGATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513988.1
CDS TCA 72 bp AAATCCTCAGTGCAACATACGTCCGCAAAAACTAAATaGTCCCTCCTCAGCCAGACAGAAAACTCTCAACAT +
Preference number: 6 (lower is better)
Translates to: KSSVQHTSAKTK*SLLSQTENSQH
Trigger: ATGTTGAGAGTTTTCTGTCTGGCTGAGGAGGGATCATTTAGTTTTTGCGGACGTATGTTGCACTGAGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS GCA 72 bp GGTGGAAATGAGGCTAAGCACACAAGCAATTACAAATaGTGTAGCAAAACGGTTATCCATTCTGGCATTCAG +
Preference number: 6 (lower is better)
Translates to: GGNEAKHTSNYK*CSKTVIHSGIQ
Trigger: CTGAATGCCAGAATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000341181.11
ENST00000394180.6
ENST00000394181.6
ENST00000394185.6
ENST00000502299.5
ENST00000502980.1
ENST00000503004.5
ENST00000503799.5
ENST00000506575.1
ENST00000507411.5
ENST00000507874.5
ENST00000507944.5
ENST00000508071.1
ENST00000508503.5
ENST00000508659.5
ENST00000508902.5
ENST00000510541.5
ENST00000510545.5
ENST00000512147.5
ENST00000513287.5
ENST00000513452.5
ENST00000513988.1
ENST00000514537.5
ENST00000515620.5
CDS GCA 72 bp ATTCCTTATACTTCTGAACCTCCTCAACAGAAATCTTaGTCTCTCCCTAAATCCTCAGTGCAACATACGTCC +
Preference number: 6 (lower is better)
Translates to: IPYTSEPPQQKS*SLPKSSVQHTS
Trigger: GGACGTATGTTGCACTGAGGATTTAGGGAGAGAGCAAGATTTCTGTTGAGGAGGTTCAGAAGTATAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS GCA 72 bp CAAACAATAGACATGCCCATGGTCAGCAGTGTACCGTaGACACATTTTAAATTACAGACTGAATTTTTGCAC +
Preference number: 6 (lower is better)
Translates to: QTIDMPMVSSVP*THFKLQTEFLH
Trigger: GTGCAAAAATTCAGTCTGTAATTTAAAATGTGTGCACGGTACACTGCTGACCATGGGCATGTCTATTGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS CAA 72 bp GTACCGTGCACACATTTTAAATTACAGACTGAATTTTaGCACGAGCTGCAGAGGATTAAGTGTTCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: VPCTHFKLQTEF*HELQRIKCSGF
Trigger: AAACCCAGAACACTTAATCCTCTGCAGCTCGTGCAAAAATTCAGTCTGTAATTTAAAATGTGTGCACGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503004.5
CDS TCA 72 bp GAGCTTTTCAGGCAATGTGACAGGGCAGTTAATACGTaGACATTTCAGATTTATAACTCTTTGGTCCCTAAA +
Preference number: 6 (lower is better)
Translates to: ELFRQCDRAVNT*TFQIYNSLVPK
Trigger: TTTAGGGACCAAAGAGTTATAAATCTGAAATGTTCACGTATTAACTGCCCTGTCACATTGCCTGAAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507411.5
CDS CCA 72 bp GGAGAGAGAGAACCAACAAACCTGCTTACATGTAATTaGGCAATCATTACGTCGTTTTGTCTATTATTAACC +
Preference number: 6 (lower is better)
Translates to: GEREPTNLLTCN*AIITSFCLLLT
Trigger: GGTTAATAATAGACAAAACGACGTAATGATTGCCCAATTACATGTAAGCAGGTTTGTTGGTTCTCTCTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502980.1
CDS GCA 72 bp ATTTATTTCTTTAAGGAGAGAGAGAACCAACAAACCTaGTTACATGTAATTGGGCAATCATTACGTCGTTTT +
Preference number: 6 (lower is better)
Translates to: IYFFKERENQQT*LHVIGQSLRRF
Trigger: AAAACGACGTAATGATTGCCCAATTACATGTAAGCAGGTTTGTTGGTTCTCTCTCTCCTTAAAGAAATAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502980.1