Pregenerated sensors for CLDN9 (Homo sapiens)
Ensembl gene IDs: ENSG00000213937Ensembl transcript IDs: ENST00000445369.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTaGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGGTGAGGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: ALPDNSRVGRAWSAP*FWSQRAAAVLVRPG Trigger: CCCTGGCCTCACCAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR CCA 90 bp | CCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTACTGGGGAGGTaGGGGCAGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTG | + |
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Preference number: 1 (lower is better) Translates to: PASVLGNGRKQLLGR*GQARVPNTSRLPNL Trigger: CAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCTGCCCCCACCTCCCCAGTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR CCA 90 bp | CCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTaGAGCCAACGAGCTGCTGCTGTTTTGGTGAGGCCAGGGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PDNSRVGRAWSAPWF*SQRAAAVLVRPGFL Trigger: CAGGAACCCTGGCCTCACCAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTGAGCCAACGAGCTGCTaGTGTTTTGGTGAGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRPSLTTPGLGGHGLLPGEPTSC*CFGEAR Trigger: CCTGGCCTCACCAAAACAGCAGCAGCTCGTTGGCTC...ACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGACAAAGGGGACCCCACTaGGAAGAGCTCAGCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSLTTPGLGGHGLLPGFGQRGPH*EELSQA Trigger: GGCCTGGCTGAGCTCTTCTCAGTGGGGTCCCCTTTG...TCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTCTAGGCTGCCCAACTTaGGGGAGAACATCAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GRPSLTTPGLGGHGLLPGLGCPT*GRTSKG Trigger: CCCCTTTGATGTTCTCCCCCAAGTTGGGCAGCCTAG...ACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGATGGGGAAGGAGGTTGTaGTGGAGCAGGGCATCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PSLTTPGLGGHGLLPGFGWGRRL*WSRASG Trigger: ACCAGATGCCCTGCTCCATCACAACCTCCTTCCCCA...TCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAACATCAAAGGGGACCCCACTGAGAAGAGCTCAGCCAGGCCAGCTGACCATGGAGCAGGGCATCTaGTCATCAGGCCAAGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: GRTSKGTPLRRAQPGQLTMEQGI*SSGQGR Trigger: TCGACCTTGGCCTGATGACCAGATGCCCTGCTCCAT...GGTCAGCTGGCCTGGCTGAGCTCTTCTCAGTGGGGTCCCCTTTGATGTTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGGAGGTGATGGGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTGTAGCTTGGGCTTTTaGAAAGTGGGTTTTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EGGDGQALPDNSRVGRAWCSLGF*KVGFPG Trigger: CCCAGGAAAACCCACTTTCCAAAAGCCCAAGCTACA...CCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCCCATCACCTCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGACAGCCAGGTGTAGCTTaGGCTTTTGGAAAGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PSLTTPGLGGHGLLPGFGQPGVA*AFGKWV Trigger: AACCCACTTTCCAAAAGCCCAAGCTACACCTGGCTG...TCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGTTACAAATGCTCTTTATTTCCAACTCGAGGGTGGGGATGTTGGGGAGAGGGCATGGTCTGCTCCCTaGTTTTGGAGCCAACGAGCT | + |
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Preference number: 2 (lower is better) Translates to: PVTNALYFQLEGGDVGERAWSAP*FWSQRA Trigger: AGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGC...CCTCTCCCCAACATCCCCACCCTCGAGTTGGAAATAAAGAGCATTTGTAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR-3UTR CAA 90 bp | GGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTCTAGGCTGCCCAACTaGGGGGAGAACATCAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: GRPSLTTPGLGGHGLLPGSRLPN*GENIKG Trigger: CCCTTTGATGTTCTCCCCCAAGTTGGGCAGCCTAGA...ACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR CCA 72 bp | GTCCTGGGCAACGGAAGGAAACAATTACTGGGGAGGTaGGGGCAGGCCAGGGTTCCCAACACCTCTAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLGNGRKQLLGR*GQARVPNTSRL Trigger: CAGCCTAGAGGTGTTGGGAACCCTGGCCTGCCCCCACCTCCCCAGTAATTGTTTCCTTCCGTTGCCCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| 3UTR CCA 72 bp | GACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTaGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: DNSRVGRAWSAP*FWSQRAAAVLV Trigger: CACCAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | GAGGGAGGTGATGGGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGCCCAGGCGGCCTAGGTaGCTCAGAGGGTGTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: EGGDGQALPDNSRVGRAWPRRPR*LRGCVW Trigger: CCAGACACACCCTCTGAGTCACCTAGGCCGCCTGGG...CCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCCCATCACCTCCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GCATCTGGTCATCAGGCCAAGGTCGAAAGGGCGGGGCAGTGGGGAGCAGTGGGCTCCCGCTCGGCTGAGTaGTGGGTGTCACCTCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ASGHQAKVERAGQWGAVGSRSAE*WVSPRG Trigger: CCCTCGAGGTGACACCCACCACTCAGCCGAGCGGGA...GCCCACTGCTCCCCACTGCCCCGCCCTTTCGACCTTGGCCTGATGACCAGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGCCCCGCTGTCACACCTaGGCTGAGCTCGCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLGGHGLLPGFGANELLLPRCHT*AELAQA Trigger: GGCCTGTGCGAGCTCAGCCCAGGTGTGACAGCGGGG...CAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCCAGCATAAGCAGTaGAGCCGCCGCCCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSLTTPGLGGHGLLPGFGAQHKQ*SRRPAQ Trigger: CTGGGCTGGGCGGCGGCTGCACTGCTTATGCTGGGC...TCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGGAGAACATCAAAGGGGACCCCACTGAGAAGAGCTCAGCCAGGCCAGCTGACCCGCTCGGCTGAGTGGTaGGTGTCACCTCGAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRTSKGTPLRRAQPGQLTRSAEW*VSPRGA Trigger: GGCCCCTCGAGGTGACACCCACCACTCAGCCGAGCG...GGTCAGCTGGCCTGGCTGAGCTCTTCTCAGTGGGGTCCCCTTTGATGTTCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | TCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCCCGAGCGGGAGGGGATaGAGTAGCCCAGCCGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLTTPGLGGHGLLPGFGAPSGRG*SSPAEV Trigger: GACCTCGGCTGGGCTACTCCATCCCCTCCCGCTCGG...GGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | GCATCTGGTCATCAGGCCAAGGTCGAAAGGGCGGGGCAGTGGGGAGCAGTGGGCATGAAAGGCGCCTCTTaGAAGGCGCCTCCTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: ASGHQAKVERAGQWGAVGMKGAS*KAPPLR Trigger: ACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCAT...GCCCACTGCTCCCCACTGCCCCGCCCTTTCGACCTTGGCCTGATGACCAGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | GCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGGTGAGGCCAGGGTTCGACAGCCACGTCTCCTaGCGGCTGGCGCAGGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: APWFWSQRAAAVLVRPGFDSHVS*RLAQVP Trigger: GGGAACCTGCGCCAGCCGGCAGGAGACGTGGCTGTC...GAACCCTGGCCTCACCAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAGGTGATGGGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGCACGATACGGGCCTTaGCACCTTCGTCCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: EREVMGRPSLTTPGLGGHARYGP*HLRPPH Trigger: GTGTGGAGGACGAAGGTGCCAAGGCCCGTATCGTGC...ATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCCCATCACCTCCCTCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | GCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTACTGGGGAGGTGGGGGCAGGCGCAGGTTCCCACTaGGCGACTCTGACAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: ASQCPGQRKETITGEVGAGAGSH*ATLTVP Trigger: TGGCACTGTCAGAGTCGCTCAGTGGGAACCTGCGCC...TGCCCCCACCTCCCCAGTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | GCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTACTGGGGAGGTGGGGGCATCCAGCACACAGGGATaGGCACCAGGATGCCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ASQCPGQRKETITGEVGASSTQG*APGCRR Trigger: TCGCCGGCATCCTGGTGCTCATCCCTGTGTGCTGGA...TGCCCCCACCTCCCCAGTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | GGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGTGGGCAGGCCCTCCCTaGCAACTCCAGGGTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GRAWSAPWFWSQRAAAVLWAGPP*QLQGWE Trigger: CTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCCCA...CAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | GGCATCTGGTCATCAGGCCAAGGTCGAAAGGGCGGGGCAGTGGGGAGCAGTGGGTTGGAGCCAACGAGCTaGTGCTGTTTTGGTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: GIWSSGQGRKGGAVGSSGLEPTS*CCFGEA Trigger: GGCCTCACCAAAACAGCAGCAGCTCGTTGGCTCCAA...CCCACTGCTCCCCACTGCCCCGCCCTTTCGACCTTGGCCTGATGACCAGATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGTGATGGGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTTTCCAACTCGAGGGTaGGGATGTTGGGGAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EGGDGQALPDNSRVGRAWFPTRG*GCWGEG Trigger: TCCCTCTCCCCAACATCCCCACCCTCGAGTTGGAAA...CCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCCCATCACCTCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GAAGGAGGTTGTGATGGAGCAGGGCATCTGGTCATCAGGCCAAGGTCGAAAGGGACGTCTCCTGCCGGCTaGCGCAGGTTCCCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: EGGCDGAGHLVIRPRSKGTSPAG*RRFPLS Trigger: GCTCAGTGGGAACCTGCGCCAGCCGGCAGGAGACGT...CCCTTTCGACCTTGGCCTGATGACCAGATGCCCTGCTCCATCACAACCTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTGGGGGAGAACATCAAGGGGGAAGGCTTGTTaGTGTCCCCAAGCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRPGFPTPLGCPTWGRTSRGKAC*CPQARP Trigger: TGGCCTGGCTTGGGGACACCAACAAGCCTTCCCCCT...TGATGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GAAGGAGGTTGTGATGGAGCAGGGCATCTGGTCATCAGGCCAAGGTCGAAAGGGGGCAGTGGGGAGCAGTaGGCTCCCAGGGGAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: EGGCDGAGHLVIRPRSKGGSGEQ*APRGNL Trigger: GAGGTTTCCCCTGGGAGCCCACTGCTCCCCACTGCC...CCCTTTCGACCTTGGCCTGATGACCAGATGCCCTGCTCCATCACAACCTCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GAGAGGGAGGTGATGGGCAGGCCCTCCCTGACAACTCCAGGGTTGGGAGGGCATATGGAGCAGGGCATCTaGTCATCAGGCCAAGGTCGA | + |
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Preference number: 4 (lower is better) Translates to: EREVMGRPSLTTPGLGGHMEQGI*SSGQGR Trigger: TCGACCTTGGCCTGATGACCAGATGCCCTGCTCCAT...ATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGGCCTGCCCATCACCTCCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTGGGGGAGAACATCAAAGCCCACTGAGCGACTCTaGCAGTGCCACCTGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: RPGFPTPLGCPTWGRTSKPTERL*QCHLGT Trigger: AGTCCCCAGGTGGCACTGTCAGAGTCGCTCAGTGGG...CTTTGATGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTACTGGGGCCTCCGCCCATCGGATaGCCTGAGGGTGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: REGRPASVLGNGRKQLLGPPPIG*PEGAAA Trigger: AGCAGCAGCACCCTCAGGGCATCCGATGGGCGGAGG...CCCCAGTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | GGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGCTTGTCCAGTCCAGATaGACCCGAGCGGGAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GRAWSAPWFWSQRAAAVLLVQSR*TRAGGD Trigger: ATCCCCTCCCGCTCGGGTGCATCTGGACTGGACAAG...CAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGTCTGGTGTGCTGGGTaGGTGTCTCTGTGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSLTTPGLGGHGLLPGFGVWCAG*VSLCPA Trigger: TGCTGGACACAGAGACACCCACCCAGCACACCAGAC...TCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTGGGGGAGAACATCAACACACGTGGTACACTaGGCACCTGTGATGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: GRPGFPTPLGCPTWGRTSTHVVH*APVMAT Trigger: GGTGGCCATCACAGGTGCCCAGTGTACCACGTGTGT...TGATGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | GGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGGAGCCAACGAGCTGCTaGTGTTTTGGTGAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRAWSAPWFWSQRAAAVLEPTSC*CFGEAR Trigger: CCTGGCCTCACCAAAACAGCAGCAGCTCGTTGGCTC...CAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTGGGGGAGAACATCACTAGGCTGCCCAACTTaGGGGAGAACATCAAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GRPGFPTPLGCPTWGRTSLGCPT*GRTSKG Trigger: CCCCTTTGATGTTCTCCCCCAAGTTGGGCAGCCTAG...TGATGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTGGGGGAGAACATCAGCATGGTCTGCTCCCTaGTTTTGGAGCCAACGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GRPGFPTPLGCPTWGRTSAWSAP*FWSQRA Trigger: AGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGC...TGATGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTACTGGGGAGGTGGGGGCAGTCCTCAGTTCCATaGAAGGCGCCTCTTGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: RPASVLGNGRKQLLGRWGQSSVP*KAPLER Trigger: CCTTTCAAGAGGCGCCTTTCATGGAACTGAGGACTG...CCCCCACCTCCCCAGTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | TTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGGGGAAGGAGGTTGTaGTGGAGCAGGGCATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LGGHGLLPGFGANELLLFWGRRL*WSRASG Trigger: ACCAGATGCCCTGCTCCATCACAACCTCCTTCCCCA...AAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | TGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTAGGGTGTGTCTGGTGTaGTGGGTGGGTGTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WEGMVCSLVLEPTSCCCFRVCLV*WVGVSV Trigger: CACAGAGACACCCACCCAGCACACCAGACACACCCT...AAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR GCA 90 bp | GAGGGCTCAGAAGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACCCAACACCTCTAGGCTaGCCAACTTGGGGGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: EGSEEKEGQPVSWATEGNPTPLG*PTWGRT Trigger: TGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGG...GTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCTTCTGAGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GAGGGCTCAGAAGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACGAAGGAAACAATTACTaGGGAGGTGGGGGCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EGSEEKEGQPVSWATEGNEGNNY*GGGGRP Trigger: TGGCCTGCCCCCACCTCCCCAGTAATTGTTTCCTTC...GTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCTTCTGAGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | TACAAATGCTCTTTATTTCCAACTCGAGGGTGGGGATGTTGGGGAGAGGGAGGTGTAGTCCCGCTCGGCTaGGTGGTGGGTGTCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: YKCSLFPTRGWGCWGEGGVVPLG*VVGVTS Trigger: CGAGGTGACACCCACCACTCAGCCGAGCGGGACTAC...ACCTCCCTCTCCCCAACATCCCCACCCTCGAGTTGGAAATAAAGAGCATTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR TCA 90 bp | CCAGTTACAAATGCTCTTTATTTCCAACTCGAGGGTGGGGATGTTGGGGAGAGGGCCCATCGGATGCCCTaGGGGTGCTGCTGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: PVTNALYFQLEGGDVGERAHRMP*GCCCSY Trigger: GTAAGAGCAGCAGCACCCTCAGGGCATCCGATGGGC...CCTCTCCCCAACATCCCCACCCTCGAGTTGGAAATAAAGAGCATTTGTAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | TCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCTGTAGCTTGGGCTTTTaGAAAGTGGGTTTTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SLTTPGLGGHGLLPGFGACSLGF*KVGFPG Trigger: CCCAGGAAAACCCACTTTCCAAAAGCCCAAGCTACA...GGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCAACGAGCTGCTGCTGTTTTGCAGCCAGGTGTAGCTTaGGCTTTTGGAAAGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GRAWSAPWFWSQRAAAVLQPGVA*AFGKWV Trigger: AACCCACTTTCCAAAAGCCCAAGCTACACCTGGCTG...CAAAACAGCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGACCATGCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | GCTCAGAAGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTTCTTGCAGGTGTTTCTaGTCCTCGCGGAGCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: AQKRRKASQCPGQRKETISCRCF*SSRSTK Trigger: CTTTGTGCTCCGCGAGGACCAGAAACACCTGCAAGA...AATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCTTCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CCA 90 bp | TCAGAAGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTACGGCCAGCCAGTGTCCTaGGCAACGGAAGGAAACAAT | + |
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Preference number: 4 (lower is better) Translates to: SEEKEGQPVSWATEGNNYGQPVS*ATEGNN Trigger: ATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCC...GTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS GCA 90 bp | CGCTGTCACACCTGGGCTGAGCTCGCACAGGCCCTCCAGACGCACTaGCAGGCTGAGGACAGCCACGTCTCCTGCCGGCTGGCGCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: RCHTWAELAQALQTH*QAEDSHVSCRLAQV Trigger: AACCTGCGCCAGCCGGCAGGAGACGTGGCTGTCCTCAGCCTGGCAGTGCGTCTGGAGGGCCTGTGCGAGCTCAGCCCAGGTGTGACAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 90 bp | TCTGGTCCTCGCGGAGCACAAAGCAGACTCGTAGTCCCGCTCGGCTaGGTGGTGGGTGTCACCTCGAGGGGCCTCCGCCCATCGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: SGPRGAQSRLVVPLG*VVGVTSRGLRPSDA Trigger: GGCATCCGATGGGCGGAGGCCCCTCGAGGTGACACCCACCACTCAGCCGAGCGGGACTACGAGTCTGCTTTGTGCTCCGCGAGGACCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS GCA 90 bp | GGGGAAACCTCCGCCTCACACGTAGTCCCTCTTGTCCAGTCCAGATaGACCCGAGCGGGAGGGGATGGAGTAGCCCAGCCGAGGTCCGCG | + |
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Preference number: 5 (lower is better) Translates to: GETSASHVVPLVQSR*TRAGGDGVAQPRSA Trigger: CGCGGACCTCGGCTGGGCTACTCCATCCCCTCCCGCTCGGGTGCATCTGGACTGGACAAGAGGGACTACGTGTGAGGCGGAGGTTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 90 bp | CATCTGGCCCCTCGGTTAGGTCTTCTCAGCCCCAGGCGGCCTAGGTaGCTCAGAGGGTGTGTCTGGTGTGCTGGGTGGGTGTCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: HLAPRLGLLSPRRPR*LRGCVWCAGWVSLC Trigger: ACACAGAGACACCCACCCAGCACACCAGACACACCCTCTGAGTCACCTAGGCCGCCTGGGGCTGAGAAGACCTAACCGAGGGGCCAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CAA 90 bp | TCCCTGACAACTCCAGGGTTGGGAGGGCATGGTCTGCTCCCTGGTTTTGGAGCCGTCTGCTCCCTGGTTTaGGAGCCAACGAGCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: SLTTPGLGGHGLLPGFGAVCSLV*EPTSCC Trigger: GCAGCAGCTCGTTGGCTCCAAAACCAGGGAGCAGAC...GGCTCCAAAACCAGGGAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 90 bp | TGTCCCCAAGCCAGGCCAGTCCTCAGTTCCATGAAAGGCGCCTCTTaGAAGGCGCCTCCTCTCCGTGCCTCTTGCAGGTGTTTCTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: CPQARPVLSSMKGAS*KAPPLRASCRCFWS Trigger: GGACCAGAAACACCTGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATGGAACTGAGGACTGGCCTGGCTTGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 90 bp | GGAAGGCTTGTTGGTGTCCCCAAGCCAGGCCAGTCCTCAGTTCCATaGAAGGCGCCTCTTGAAAGGCGCCTCCTCTCCGTGCCTCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: GRLVGVPKPGQSSVP*KAPLERRLLSVPLA Trigger: TGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATGGAACTGAGGACTGGCCTGGCTTGGGGACACCAACAAGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS GCA 90 bp | CCTCAGTTCCATGAAAGGCGCCTCTTGAAAGGCGCCTCCTCTCCGTaGCTCTTGCAGGTGTTTCTGGTCCTCGCGGAGCACAAAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: PQFHERRLLKGASSP*LLQVFLVLAEHKAD Trigger: GTCTGCTTTGTGCTCCGCGAGGACCAGAAACACCTGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATGGAACTGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CAA 90 bp | CAGGCCAGGGTTCCCAACACCTCTAGGCTGCCCAACTTGGGGGAGAACATCAAACATGAAAGGCGCCTCTaGAAAGGCGCCTCCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: QARVPNTSRLPNLGENIKHERRL*KGASSP Trigger: CGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATG...TTTGATGTTCTCCCCCAAGTTGGGCAGCCTAGAGGTGTTGGGAACCCTGGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CAA 90 bp | GAGGGCTCAGAAGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACTCTAGGCTGCCCAACTaGGGGGAGAACATCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: EGSEEKEGQPVSWATEGNSRLPN*GENIKG Trigger: CCCTTTGATGTTCTCCCCCAAGTTGGGCAGCCTAGA...GTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCTTCTGAGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CAA 90 bp | GCTCAGAAGAGAAGGAAGGCCAGCCAGTGTCCTGGGCAACGGAAGGAAACAATTCTGACAACTCCAGGGTaGGGAGGGCATGGTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: AQKRRKASQCPGQRKETILTTPG*GGHGLL Trigger: GAGCAGACCATGCCCTCCCAACCCTGGAGTTGTCAG...AATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCTTCCTTCTCTTCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CAA 90 bp | TACAAATGCTCTTTATTTCCAACTCGAGGGTGGGGATGTTGGGGAGAGGGAGGTAGCACGATACGGGCCTaGGCACCTTCGTCCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: YKCSLFPTRGWGCWGEGGSTIRA*APSSST Trigger: TGTGGAGGACGAAGGTGCCAAGGCCCGTATCGTGCT...ACCTCCCTCTCCCCAACATCCCCACCCTCGAGTTGGAAATAAAGAGCATTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS-3UTR CAA 90 bp | CCAGTTACAAATGCTCTTTATTTCCAACTCGAGGGTGGGGATGTTGGGGAGAGGCGAGCTGCTGCTGTTTaGGTGAGGCCAGGGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PVTNALYFQLEGGDVGERRAAAV*VRPGFL Trigger: CAGGAACCCTGGCCTCACCAAAACAGCAGCAGCTCG...CCTCTCCCCAACATCCCCACCCTCGAGTTGGAAATAAAGAGCATTTGTAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CCA 72 bp | TCTTGTCCAGTCCAGATGCACCCGAGCGGGAGGGGATaGAGTAGCCCAGCCGAGGTCCGCGGGGCCGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: SCPVQMHPSGRG*SSPAEVRGAAR Trigger: TCGAGCGGCCCCGCGGACCTCGGCTGGGCTACTCCATCCCCTCCCGCTCGGGTGCATCTGGACTGGACAAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 72 bp | GCTGCTGCTCTTACCACCCCGCTGTCACACCTGGGCTaGGCTCGCACAGGCCCTCCAGACGCACTGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AAALTTPLSHLG*ARTGPPDALPG Trigger: GCCTGGCAGTGCGTCTGGAGGGCCTGTGCGAGCTCAGCCCAGGTGTGACAGCGGGGTGGTAAGAGCAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CCA 72 bp | ACTGCCAGGCTGAGGACAGCCACGTCTCCTGCCGGCTaGCGCAGGTTCCCACTGAGCGACTCTGACAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: TARLRTATSPAG*RRFPLSDSDSA Trigger: GGCACTGTCAGAGTCGCTCAGTGGGAACCTGCGCCAGCCGGCAGGAGACGTGGCTGTCCTCAGCCTGGCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CCA 72 bp | TCTGGTCATCAGGCCAAGGTCGAAAGGGCGGGGCAGTaGGGAGCAGTGGGCTCCCAGGGGAAACCTCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SGHQAKVERAGQ*GAVGSQGKPPP Trigger: AGGCGGAGGTTTCCCCTGGGAGCCCACTGCTCCCCACTGCCCCGCCCTTTCGACCTTGGCCTGATGACCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 72 bp | CCTCGGTTAGGTCTTCTCAGCCCCAGGCGGCCTAGGTaGCTCAGAGGGTGTGTCTGGTGTGCTGGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PRLGLLSPRRPR*LRGCVWCAGWV Trigger: CACCCACCCAGCACACCAGACACACCCTCTGAGTCACCTAGGCCGCCTGGGGCTGAGAAGACCTAACCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS TCA 72 bp | GCCAGGCCAGTCCTCAGTTCCATGAAAGGCGCCTCTTaGAAGGCGCCTCCTCTCCGTGCCTCTTGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ARPVLSSMKGAS*KAPPLRASCRC Trigger: ACACCTGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATGGAACTGAGGACTGGCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CCA 72 bp | AAGGCGCCTCCTCTCCGTGCCTCTTGCAGGTGTTTCTaGTCCTCGCGGAGCACAAAGCAGACTCGTAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: KAPPLRASCRCF*SSRSTKQTRSP Trigger: GGGACTACGAGTCTGCTTTGTGCTCCGCGAGGACCAGAAACACCTGCAAGAGGCACGGAGAGGAGGCGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CAA 72 bp | AGGCGCCTCTTGAAAGGCGCCTCCTCTCCGTGCCTCTaGCAGGTGTTTCTGGTCCTCGCGGAGCACAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RRLLKGASSPCL*QVFLVLAEHKA Trigger: TGCTTTGTGCTCCGCGAGGACCAGAAACACCTGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CAA 72 bp | AGCCAGGCCAGTCCTCAGTTCCATGAAAGGCGCCTCTaGAAAGGCGCCTCCTCTCCGTGCCTCTTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SQASPQFHERRL*KGASSPCLLQV Trigger: CACCTGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATGGAACTGAGGACTGGCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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| CDS CAA 90 bp | GTGTCCCCAAGCCAGGCCAGTCCTCAGTTCCATGAAAGGCGCCTCTaGAAAGGCGCCTCCTCTCCGTGCCTCTTGCAGGTGTTTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VSPSQASPQFHERRL*KGASSPCLLQVFLV Trigger: GACCAGAAACACCTGCAAGAGGCACGGAGAGGAGGCGCCTTTCAAGAGGCGCCTTTCATGGAACTGAGGACTGGCCTGGCTTGGGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445369.3 |
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