Pregenerated sensors for CLDN34 (Homo sapiens)
Ensembl gene IDs: ENSG00000234469Ensembl transcript IDs: ENST00000445307.4
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTaGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCG | + |
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Preference number: 1 (lower is better) Translates to: SVSHIQIHKITEGGS*PPSVPNYPCHGLES Trigger: CGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR CCA 90 bp | GGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGTTaGAAATATTTGGTAGAGCATGCTAATAACATTTTCCATAAACTC | + |
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Preference number: 1 (lower is better) Translates to: GHLLSQTTHATVLSR*KYLVEHANNIFHKL Trigger: GAGTTTATGGAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCGTCCCAAACTACCCATaGCACGGTCTTGAGTCGTTG | + |
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Preference number: 2 (lower is better) Translates to: SEPHSDTQDNRRRQLATFVPNYP*HGLESL Trigger: CAACGACTCAAGACCGTGGCATGGGTAGTTTGGGAC...GAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR CAA 90 bp | GAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTaGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTTC | + |
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Preference number: 2 (lower is better) Translates to: EAVGHLLSQTTHATV*SRWKYLVEHANNIF Trigger: GAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR-3UTR TCA 90 bp | CAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGCCCATGCCACGGTCTTaGGTCGTTGGAAATATTTGG | + |
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Preference number: 2 (lower is better) Translates to: QQISEPHSDTQDNRRRQLPMPRS*VVGNIW Trigger: CCAAATATTTCCAACGACTCAAGACCGTGGCATGGG...CAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR GCA 72 bp | GGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATaGCACGGTCTTGAGTCGTTGGAAATATTTGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: GGSWPPSVPNYP*HGLESLEIFGR Trigger: TCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR CCA 72 bp | CACATTCAGATACACAAGATAACAGAAGGAGGCAGTTaGCCACCTTCTGTCCCAAACTACCCATGCCACGGT | + |
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Preference number: 3 (lower is better) Translates to: HIQIHKITEGGS*PPSVPNYPCHG Trigger: ACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCACCCATGCCACGGTCTaGAGTCGTTGGAAATATTTG | + |
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Preference number: 3 (lower is better) Translates to: SEPHSDTQDNRRRQLATFTHATV*SRWKYL Trigger: CAAATATTTCCAACGACTCAAGACCGTGGCATGGGT...GAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR-3UTR CAA 90 bp | ATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCACCAGAAATCTTAGATTaGCAAAGCCAATGCAACCAG | + |
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Preference number: 3 (lower is better) Translates to: IHKITEGGSWPPSVPNYPPEILD*QSQCNQ Trigger: CTGGTTGCATTGGCTTTGCAAATCTAAGATTTCTGG...TGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGACAGAAGGAGGCAGTTaGCCACCTTCTGTCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GGSWPPSVPNYPCHGLESTEGGS*PPSVPN Trigger: GTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGT...CGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGCCACTTGAATGGCAGTaGCAACTTCCTGCACATCTG | + |
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Preference number: 4 (lower is better) Translates to: GGSWPPSVPNYPCHGLESPLEWQ*QLPAHL Trigger: CAGATGTGCAGGAAGTTGGCACTGCCATTCAAGTGG...CGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | GGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGGCGAAGACTGAAAATTaGCAGTCGGCACTGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGSWPPSVPNYPCHGLESAKTEN*QSALLQ Trigger: CTGCAACAGTGCCGACTGCCAATTTTCAGTCTTCGC...CGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | AAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACTGGTTGTGGTGCTGTTaGTGCGACGCCGGTAAATGC | + |
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Preference number: 4 (lower is better) Translates to: KITEGGSWPPSVPNYPCHWLWCC*CDAGKC Trigger: GCATTTACCGGCGTCGCACCAACAGCACCACAACCA...GTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | AAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACCCTGCACATCTGGCTTaGAGGGCATTTGGAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: KITEGGSWPPSVPNYPCHPAHLA*RAFGEM Trigger: CATCTCTCCAAATGCCCTTCAAGCCAGATGTGCAGG...GTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | AAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACTCCCTGCCACTTGAATaGCAGTGCCAACTTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KITEGGSWPPSVPNYPCHSLPLE*QCQLPA Trigger: TGCAGGAAGTTGGCACTGCCATTCAAGTGGCAGGGA...GTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | CACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCTCCCCTGTGAGTTTATaGCGGCATCGTAGTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HKITEGGSWPPSVPNYPCSPVSL*RHRSSG Trigger: TCCAGAACTACGATGCCGTCATAAACTCACAGGGGA...GCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | GTTGGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGTTGGAAACGAAGAATCCGAAAATaGTGGCAGTCAGTAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VGHLLSQTTHATVLSRWKRRIRK*WQSVGS Trigger: GCTTCCTACTGACTGCCAGCATTTTCGGATTCTTCG...TTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | AGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTCTGAAATACCAGGATaGACTTGGCCGTACGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SEPHSDTQDNRRRQLATFSEIPG*TWPYGG Trigger: TCCCCCGTACGGCCAAGTGCATCCTGGTATTTCAGA...GAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | AAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACAACTTCCTGCACATCTaGCTTGAAGGGCATTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KITEGGSWPPSVPNYPCHNFLHI*LEGHLE Trigger: CTCCAAATGCCCTTCAAGCCAGATGTGCAGGAAGTT...GTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | CAAACTACCCATGCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTGGTAAGGGCGAAGACTaGAAATTGGCAGTCGGCACT | + |
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Preference number: 4 (lower is better) Translates to: QTTHATVLSRWKYLVEHAGKGED*KLAVGT Trigger: AGTGCCGACTGCCAATTTTCAGTCTTCGCCCTTACC...AGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | AGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCGAAGGTGATCCCCTGTaGGTTTATGACGGCATCGTA | + |
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Preference number: 4 (lower is better) Translates to: SEPHSDTQDNRRRQLATFEGDPL*VYDGIV Trigger: TACGATGCCGTCATAAACTCACAGGGGATCACCTTC...GAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | AAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACAGAATCCGAAAATGCTaGCAGTCAGTAGGAAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: KITEGGSWPPSVPNYPCHRIRKC*QSVGSV Trigger: AACGCTTCCTACTGACTGCCAGCATTTTCGGATTCT...GTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR CAA 72 bp | GGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTaGAGTCGTTGGAAATATTTGGTAGAGCATGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: GHLLSQTTHATV*SRWKYLVEHAN Trigger: ATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | CAAACTACCCATGCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTCCCATGCCACGGTCTTaGGTCGTTGGAAATATTTGG | + |
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Preference number: 4 (lower is better) Translates to: QTTHATVLSRWKYLVEHAPMPRS*VVGNIW Trigger: CCAAATATTTCCAACGACTCAAGACCGTGGCATGGG...AGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | ATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCAAACAAAATTTGGTTGTaGTGCTGTTGGTGCGACGCC | + |
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Preference number: 4 (lower is better) Translates to: IHKITEGGSWPPSVPNYPNKIWL*CCWCDA Trigger: GGCGTCGCACCAACAGCACCACAACCAAATTTTGTT...TGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | CACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCATCGGTAACAAAATTTaGTTGTGGTGCTGTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HKITEGGSWPPSVPNYPCIGNKI*LWCCWC Trigger: GCACCAACAGCACCACAACCAAATTTTGTTACCGAT...GCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | CAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGTTGTGGTGCTGTTGGTaGGACGCCGGTAAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QQISEPHSDTQDNRRRQLLWCCW*DAGKCR Trigger: TCTGCATTTACCGGCGTCGCACCAACAGCACCACAA...CAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | GCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTTCGGGCATTTGGAGAGATaGCAGGAAGGTGATCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ATVLSRWKYLVEHANNIFGHLER*QEGDPL Trigger: CAGGGGATCACCTTCCTGCCATCTCTCCAAATGCCC...GAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | ATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCAGGAAGCGTTGAGCCATaGAAATTTCAAAAGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: IHKITEGGSWPPSVPNYPGSVEP*KFQKGE Trigger: TTCTCCCTTTTGAAATTTCCATGGCTCAACGCTTCC...TGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | GCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTTCATACCAGGATGCACTTaGCCGTACGGGGGACATTTG | + |
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Preference number: 4 (lower is better) Translates to: ATVLSRWKYLVEHANNIFIPGCT*PYGGHL Trigger: CAAATGTCCCCCGTACGGCCAAGTGCATCCTGGTAT...GAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | CAAACTACCCATGCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTCAACCAACAAATCAGTaGGCCACATTCAGATACACA | + |
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Preference number: 4 (lower is better) Translates to: QTTHATVLSRWKYLVEHAQPTNQ*ATFRYT Trigger: TGTGTATCTGAATGTGGCTCACTGATTTGTTGGTTG...AGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | GCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTTCAAAATTTGGTTGTGGTaGTGTTGGTGCGACGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: ATVLSRWKYLVEHANNIFKIWLW*CWCDAG Trigger: ACCGGCGTCGCACCAACAGCACCACAACCAAATTTT...GAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | AATTCAACCAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGCAGTGCCAACTTCCTaGACATCTGGCTTGAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NSTNKSVSHIQIHKITEGAVPTS*TSGLKG Trigger: GCCCTTCAAGCCAGATGTGCAGGAAGTTGGCACTGC...TCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTGGTTGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | GCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTTCGTCAGTAGGAAGCGTTaGGCCATGGAAATTTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: ATVLSRWKYLVEHANNIFVSRKR*AMEISK Trigger: TTTTGAAATTTCCATGGCTCAACGCTTCCTACTGAC...GAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CCA 90 bp | CATGCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTGCAATAAGACCAACTaGCAGGTGGGAAGACTTTTA | + |
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Preference number: 4 (lower is better) Translates to: HATVLSRWKYLVEHANNICNKTN*QVGRLL Trigger: TAAAAGTCTTCCCACCTGCCAGTTGGTCTTATTGCA...AATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR GCA 90 bp | TCAACCAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCGATTTGCAAAGCCAATaGAACCAGGAAATTCACATT | + |
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Preference number: 4 (lower is better) Translates to: STNKSVSHIQIHKITEGGDLQSQ*NQEIHI Trigger: AATGTGAATTTCCTGGTTGCATTGGCTTTGCAAATC...GCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTGGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| 3UTR CAA 72 bp | ACTACCCATGCCACGGTCTTGAGTCGTTGGAAATATTaGGTAGAGCATGCTAATAACATTTTCCATAAACTC | + |
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Preference number: 4 (lower is better) Translates to: TTHATVLSRWKY*VEHANNIFHKL Trigger: GAGTTTATGGAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR TCA 90 bp | AATTCAACCAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGACTTAGTTTACAGGGTTaGTTATTTGCTGTAGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: NSTNKSVSHIQIHKITEGLSLQG*LFAVAN Trigger: GTTGGCTACAGCAAATAATCAACCCTGTAAACTAAG...TCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTGGTTGAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | GGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGACCCATGCCACGGTCTaGAGTCGTTGGAAATATTTG | + |
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Preference number: 5 (lower is better) Translates to: GGSWPPSVPNYPCHGLESTHATV*SRWKYL Trigger: CAAATATTTCCAACGACTCAAGACCGTGGCATGGGT...CGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS TCA 90 bp | AACATCCCAGTTAACAGCATCGGCAAGACACCTATCCCTGCCACTTaGATGGCAGTGCCAACTTCCTGCACATCTGGCTTGAAGGGCATT | + |
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Preference number: 5 (lower is better) Translates to: NIPVNSIGKTPIPAT*MAVPTSCTSGLKGI Trigger: AATGCCCTTCAAGCCAGATGTGCAGGAAGTTGGCACTGCCATTCAAGTGGCAGGGATAGGTGTCTTGCCGATGCTGTTAACTGGGATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | GATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCAACAGAAGGAGGCAGTaGGCCACCTTCTGTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: DTQDNRRRQLATFCPKLPNRRRQ*ATFCPK Trigger: TTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTT...GGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | ATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCAACCTATCCCTGCCACTaGAATGGCAGTGCCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: IHKITEGGSWPPSVPNYPTYPCH*NGSANF Trigger: GAAGTTGGCACTGCCATTCAAGTGGCAGGGATAGGT...TGGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | GATACACAAGATAACAGAAGGAGGCAGTTGGCCACCTTCTGTCCCAAACTACCCGGTAACAAAATTTGGTaGTGGTGCTGTTGGTGCGAC | + |
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Preference number: 5 (lower is better) Translates to: DTQDNRRRQLATFCPKLPGNKIW*WCCWCD Trigger: GTCGCACCAACAGCACCACAACCAAATTTTGTTACC...GGGTAGTTTGGGACAGAAGGTGGCCAACTGCCTCCTTCTGTTATCTTGTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS CCA 90 bp | CGAAGAATCCGAAAATGCTGGCAGTCAGTAGGAAGCGTTGAGCCATaGAAATTTCAAAAGGGAGAAAGGTGTCCTGGTAGCTGTATCGGT | + |
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Preference number: 5 (lower is better) Translates to: RRIRKCWQSVGSVEP*KFQKGERCPGSCIG Trigger: ACCGATACAGCTACCAGGACACCTTTCTCCCTTTTGAAATTTCCATGGCTCAACGCTTCCTACTGACTGCCAGCATTTTCGGATTCTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | CTTCTGTCCCAAACTACCCATGCCACGGTCTTGAGTCGTTGGAAATATTTGGTAACACCAGCAGCAATGTaGAGAATTCCTGAAACAACG | + |
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Preference number: 5 (lower is better) Translates to: LLSQTTHATVLSRWKYLVTPAAM*RIPETT Trigger: CGTTGTTTCAGGAATTCTCAACATTGCTGCTGGTGT...TACCAAATATTTCCAACGACTCAAGACCGTGGCATGGGTAGTTTGGGACAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | GCCACGGTCTTGAGTCGTTGGAAATATTTGGTAGAGCATGCTAATAACATTTTCAATACCAGGATGCACTaGGCCGTACGGGGGACATTT | + |
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Preference number: 5 (lower is better) Translates to: ATVLSRWKYLVEHANNIFNTRMH*AVRGTF Trigger: AAATGTCCCCCGTACGGCCAAGTGCATCCTGGTATT...GAAAATGTTATTAGCATGCTCTACCAAATATTTCCAACGACTCAAGACCGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS GCA 90 bp | ATTGTAGGTGTCCTCCTCAAACATTCTCATGGACATGTTTCTAAGTaGAAACATGTTAAAGGCTCTCCCGAAGAATCCGAAAATGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: IVGVLLKHSHGHVSK*KHVKGSPEESENAG Trigger: GCCAGCATTTTCGGATTCTTCGGGAGAGCCTTTAACATGTTTGCACTTAGAAACATGTCCATGAGAATGTTTGAGGAGGACACCTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | CAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCAGTTGCACGGTCTTGAGTCGTaGGAAATATTTGGTAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: QQISEPHSDTQDNRRRQLHGLES*EIFGRA Trigger: TGCTCTACCAAATATTTCCAACGACTCAAGACCGTG...CAACTGCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | TCAACCAACAAATCAGTGAGCCACATTCAGATACACAAGATAACAGAAGGAGGCCCAGAAATCTTAGATTaGCAAAGCCAATGCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: STNKSVSHIQIHKITEGGPEILD*QSQCNQ Trigger: CTGGTTGCATTGGCTTTGCAAATCTAAGATTTCTGG...GCCTCCTTCTGTTATCTTGTGTATCTGAATGTGGCTCACTGATTTGTTGGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS-3UTR CAA 90 bp | TTAAGAGGGAAATGTGAGAAGTTAATGTACTCAGAAACTCTTATTTCCCTACTCTCCTGCACATCTGGCTaGAAGGGCATTTGGAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LRGKCEKLMYSETLISLLSCTSG*KGIWRD Trigger: ATCTCTCCAAATGCCCTTCAAGCCAGATGTGCAGGA...GAGTAGGGAAATAAGAGTTTCTGAGTACATTAACTTCTCACATTTCCCTCTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS TCA 72 bp | GGGCATTTGGAGAGATGGCAGGAAGGTGATCCCCTGTaGGTTTATGACGGCATCGTAGTTCTGGAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: GHLERWQEGDPL*VYDGIVVLEHS Trigger: GCTGTGCTCCAGAACTACGATGCCGTCATAAACTCACAGGGGATCACCTTCCTGCCATCTCTCCAAATGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS TCA 72 bp | GGAGAGGATCCATCCTATGGTGGTAAGGGCGAAGACTaGAAATTGGCAGTCGGCACTGTTGCAGAACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GEDPSYGGKGED*KLAVGTVAEPD Trigger: GTCTGGTTCTGCAACAGTGCCGACTGCCAATTTTCAGTCTTCGCCCTTACCACCATAGGATGGATCCTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS CCA 72 bp | TGTCCTGGTAGCTGTATCGGTAACAAAATTTGGTTGTaGTGCTGTTGGTGCGACGCCGGTAAATGCAGACTC | + |
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Preference number: 6 (lower is better) Translates to: CPGSCIGNKIWL*CCWCDAGKCRL Trigger: GAGTCTGCATTTACCGGCGTCGCACCAACAGCACCACAACCAAATTTTGTTACCGATACAGCTACCAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS CAA 72 bp | AGGTGTCCTGGTAGCTGTATCGGTAACAAAATTTGGTaGTGGTGCTGTTGGTGCGACGCCGGTAAATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RCPGSCIGNKIW*WCCWCDAGKCR Trigger: TCTGCATTTACCGGCGTCGCACCAACAGCACCACAACCAAATTTTGTTACCGATACAGCTACCAGGACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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| CDS GCA 72 bp | GTCCTCCTCAAACATTCTCATGGACATGTTTCTAAGTaGAAACATGTTAAAGGCTCTCCCGAAGAATCCGAA | + |
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Preference number: 6 (lower is better) Translates to: VLLKHSHGHVSK*KHVKGSPEESE Trigger: TTCGGATTCTTCGGGAGAGCCTTTAACATGTTTGCACTTAGAAACATGTCCATGAGAATGTTTGAGGAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445307.4 |
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