Pregenerated sensors for CLDN22 (Homo sapiens)
Ensembl gene IDs: ENSG00000177300Ensembl transcript IDs: ENST00000323319.7
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTaGCCCCCACAGGCTGCTCAGTGCCTGGGAAGCCAGAAACGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: VPGGYLPTHPSPALP*PPQAAQCLGSQKRC Trigger: GCAGCGTTTCTGGCTTCCCAGGCACTGAGCAGCCTGTGGGGGGCACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR GCA 90 bp | CTCCAGAATATGTGCTCTGTGGTCGCTGCGCCTGGGCTGGCAGTGTaGTCCACAGAGAGGCAGCCGTCCCAGGAGGTTATCTACCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: LQNMCSVVAAPGLAV*STERQPSQEVIYPH Trigger: GTGTGGGTAGATAACCTCCTGGGACGGCTGCCTCTCTGTGGAGCACACTGCCAGCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR TCA 90 bp | CCCCCACAGGCTGCTCAGTGCCTGGGAAGCCAGAAACGCTGCCCGTaGAATACAGAACACAGGATGCAGAAGCACGTTTGTGTGGCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: PPQAAQCLGSQKRCP*NTEHRMQKHVCVAE Trigger: CTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTCACGGGCAGCGTTTCTGGCTTCCCAGGCACTGAGCAGCCTGTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR GCA 90 bp | GCCTGGGAAGCCAGAAACGCTGCCCGTGAAATACAGAACACAGGATaGAGAAGCACGTTTGTGTGGCAGAGTCTACTTGAATCATCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: AWEARNAAREIQNTG*RSTFVWQSLLESSK Trigger: TTTGGATGATTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTCACGGGCAGCGTTTCTGGCTTCCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTAAAAGCACAGTGAGATaGCTAGAGCGGGACATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: RQPSQEVIYPHTPVLPCRKSTVR*LERDIL Trigger: TAGGATGTCCCGCTCTAGTCATCTCACTGTGCTTTT...ACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGGCTCCAGAATATGTGCTCTGTGGTCGCTGCGCCTGGGCTGGCAGTGTGCTCGTGGCAGAGTCTACTTaGATCATCCAAAACCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RAPEYVLCGRCAWAGSVLVAEST*IIQNPR Trigger: TCTTGGGTTTTGGATGATTCAAGTAGACTCTGCCAC...GAGCACACTGCCAGCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR CAA 90 bp | TACAGAACACAGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTaGAATCATCCAAAACCCAAGATCGCCCTCCTGCCTCTGACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: YRTQDAEARLCGRVY*NHPKPKIALLPLTV Trigger: TACTGTCAGAGGCAGGAGGGCGATCTTGGGTTTTGGATGATTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR GCA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTCCTGGGCTGGCAGTGTaGTCCACAGAGAGGCAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCPGLAV*STERQP Trigger: CGGCTGCCTCTCTGTGGAGCACACTGCCAGCCCAGG...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR GCA 90 bp | AATACATCACATAGATTAACTGGTTTCTGCACTTTCCATGTGTTTGTGGGTGGACCACAGGCTGCTCAGTaGCTGGGAAGCCAGAAACGC | + |
|
Preference number: 2 (lower is better) Translates to: NTSHRLTGFCTFHVFVGGPQAAQ*LGSQKR Trigger: GCGTTTCTGGCTTCCCAGGCACTGAGCAGCCTGTGG...TCCACCCACAAACACATGGAAAGTGCAGAAACCAGTTAATCTATGTGATGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTTCGCCCTCCTGCCTCTaGCAGTATAGAAGGCGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCSPSCL*QYRRRD Trigger: GTCACGCCTTCTATACTGTCAGAGGCAGGAGGGCGA...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR TCA 90 bp | GAAATACAGAACACAGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTTGAACTATTCAGTCTTGATTaGTTTTGGTCTCAGACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: EIQNTGCRSTFVWQSLLELFSLD*FWSQTR Trigger: TCTAGTCTGAGACCAAAATCAATCAAGACTGAATAG...TTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTTATAGAAGGCGTGACTaGATGTGGCTGCCTTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCYRRRD*MWLPFE Trigger: TTCAAAAGGCAGCCACATTCAGTCACGCCTTCTATA...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR TCA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTATTGAGCAAATAAAATaGAGGGCTCCAGAATATGTG | + |
|
Preference number: 2 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCIEQIK*RAPEYV Trigger: CACATATTCTGGAGCCCTTCATTTTATTTGCTCAAT...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTGCCCTACCAAATCCAGTGTaGAGCAAGCGTCTCCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QPSQEVIYPHTPVLPCRALPNPV*SKRLLN Trigger: GTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAG...GGCACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTGCCGATGCAGAAGCACGTTaGTGTGGCAGAGTCTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: QPSQEVIYPHTPVLPCRADAEAR*CGRVYL Trigger: CAAGTAGACTCTGCCACACAAACGTGCTTCTGCATC...GGCACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR CCA 72 bp | GCAAATAAAATGAAGGGCTCCAGAATATGTGCTCTGTaGTCGCTGCGCCTGGGCTGGCAGTGTGCTCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: ANKMKGSRICAL*SLRLGWQCAPQ Trigger: CTGTGGAGCACACTGCCAGCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAGCCCTTCATTTTATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR TCA 72 bp | AGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTTaGATCATCCAAAACCCAAGATCGCCCTCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RMQKHVCVAEST*IIQNPRSPSCL Trigger: GAGGCAGGAGGGCGATCTTGGGTTTTGGATGATTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR GCA 72 bp | GCCAGAAACGCTGCCCGTGAAATACAGAACACAGGATaGAGAAGCACGTTTGTGTGGCAGAGTCTACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: ARNAAREIQNTG*RSTFVWQSLLE Trigger: TTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTCACGGGCAGCGTTTCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR CCA 72 bp | GAAATACAGAACACAGGATGCAGAAGCACGTTTGTGTaGCAGAGTCTACTTGAATCATCCAAAACCCAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EIQNTGCRSTFV*QSLLESSKTQD Trigger: ATCTTGGGTTTTGGATGATTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTTGTGGTCGCTGCGCCTaGGCTGGCAGTGTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQPSQEVIYPHTPVLPCRCGRCA*AGSVLH Trigger: GTGGAGCACACTGCCAGCCCAGGCGCAGCGACCACA...ACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGCTCCACAGAGAGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCGTGCTCTGTGGTCGCTaGGCCTGGGCTGGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QCAPQRGSRPRRLSTHTPVLCGR*AWAGSV Trigger: CACACTGCCAGCCCAGGCGCAGCGACCACAGAGCAC...GGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCTCTCTGTGGAGCACACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | ACTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGAGTCCTGCCCTGCCGTaGCCCCCACAGGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRAGHPTKSSVEQASPEQSPALP*PPQAAQ Trigger: CTGAGCAGCCTGTGGGGGGCACGGCAGGGCAGGACT...CTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | GCAAATAAAATGAAGGGCTCCAGAATATGTGCTCTGTGGTCGCTGCGCCTGGGCCCTGGGCTGGCAGTGTaGTCCACAGAGAGGCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ANKMKGSRICALWSLRLGPGLAV*STERQP Trigger: CGGCTGCCTCTCTGTGGAGCACACTGCCAGCCCAGG...GCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAGCCCTTCATTTTATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CCA 90 bp | CGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCAGACGCAGAATATGTGCTCTGTaGTCGCTGCGCCTGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDILPNPVLSKRLLNSRRRICAL*SLRLGW Trigger: CCAGCCCAGGCGCAGCGACCACAGAGCACATATTCT...GCGTCTGCTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGCTCCACAGAGAGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCAAAAGCACAGTGAGATaGCTAGAGCGGGACATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QCAPQRGSRPRRLSTHTPKSTVR*LERDIL Trigger: TAGGATGTCCCGCTCTAGTCATCTCACTGTGCTTTT...GGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCTCTCTGTGGAGCACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTGCCATACAAAATATTTCATaGAGAAATCCCCAGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPSQEVIYPHTPVLPCRAIQNIS*RNPQAG Trigger: GCCAGCCTGGGGATTTCTTCATGAAATATTTTGTAT...GGCACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCCAGAATATGTGCTCTGTGGTCGCTGCGCCTGGGCTGGCAGTGTGCTCATACAGAACACAGGATaGAGAAGCACGTTTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAPEYVLCGRCAWAGSVLIQNTG*RSTFVW Trigger: CCACACAAACGTGCTTCTGCATCCTGTGTTCTGTAT...GAGCACACTGCCAGCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | ACTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCCACAGGCTGCTCAGTaGCTGGGAAGCCAGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: TRAGHPTKSSVEQASPEQPQAAQ*LGSQKR Trigger: GCGTTTCTGGCTTCCCAGGCACTGAGCAGCCTGTGG...CTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTCTTAGTGTTTCAGGTTaGTGTTTCTCGTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQPSQEVIYPHTPVLPCRLSVSG*CFSSPV Trigger: AACTGGAGACGAGAAACACCAACCTGAAACACTAAG...ACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTCTATTCAGTCTTGATTaGTTTTGGTCTCAGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQPSQEVIYPHTPVLPCRLFSLD*FWSQTR Trigger: TCTAGTCTGAGACCAAAATCAATCAAGACTGAATAG...ACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | GCAAATAAAATGAAGGGCTCCAGAATATGTGCTCTGTGGTCGCTGCGCCTGGGCCAGAAACGCTGCCCGTaGAATACAGAACACAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ANKMKGSRICALWSLRLGQKRCP*NTEHRM Trigger: CATCCTGTGTTCTGTATTTCACGGGCAGCGTTTCTG...GCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAGCCCTTCATTTTATTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | CGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCAGACGCAGCCAAACTAACTCCTaGCCTTCGGTTGCTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDILPNPVLSKRLLNSRRSQTNS*PSVAVK Trigger: TTTCACAGCAACCGAAGGGCAGGAGTTAGTTTGGCT...GCGTCTGCTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | ACTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGATGATCTTGTGTTTGTaGCACTGCGTAGTGGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TRAGHPTKSSVEQASPEQMILCL*HCVVAR Trigger: TCGGGCCACTACGCAGTGGCACAAACACAAGATCAT...CTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGCTCCACAGAGAGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCGTTTATTTCCCTGATTaGCACAAACACAAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCAPQRGSRPRRLSTHTPVYFPD*HKHKSF Trigger: GAAACTCTTGTGTTTGTGCCAATCAGGGAAATAAAC...GGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCTCTCTGTGGAGCACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR CAA 72 bp | CAGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTaGAATCATCCAAAACCCAAGATCGCCCTCCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDAEARLCGRVY*NHPKPKIALLP Trigger: AGGCAGGAGGGCGATCTTGGGTTTTGGATGATTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | CTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCTATAGAAGGCGTGACTaGATGTGGCTGCCTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LERDILPNPVLSKRLLNSYRRRD*MWLPFE Trigger: TTCAAAAGGCAGCCACATTCAGTCACGCCTTCTATA...GCTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | GAAATACAGAACACAGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTTGAATCGCCCTCCTGCCTCTaGCAGTATAGAAGGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EIQNTGCRSTFVWQSLLESPSCL*QYRRRD Trigger: GTCACGCCTTCTATACTGTCAGAGGCAGGAGGGCGA...TTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | CGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCAGACGCGAAACTCCAGCTAGTTaGGCTACAGTTCTAAATACT | + |
|
Preference number: 4 (lower is better) Translates to: RDILPNPVLSKRLLNSRRETPAS*ATVLNT Trigger: AGTATTTAGAACTGTAGCTCAACTAGCTGGAGTTTC...GCGTCTGCTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | CTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCTTCAGTTTATTTCCCTaGTTGGCACAAACACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LERDILPNPVLSKRLLNSFSLFP*LAQTQE Trigger: CTCTTGTGTTTGTGCCAATCAGGGAAATAAACTGAA...GCTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CCA 90 bp | ACTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGAAGAAATCCCCAGGCTaGCAGTTTGTGATGAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRAGHPTKSSVEQASPEQKKSPG*QFVMNS Trigger: ACTATTCATCACAAACTGCCAGCCTGGGGATTTCTT...CTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | CTAGAGCGGGACATCCTACCAAATCCAGTGTTGAGCAAGCGTCTCCTGAACAGCATTGAGCAAATAAAATaGAGGGCTCCAGAATATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LERDILPNPVLSKRLLNSIEQIK*RAPEYV Trigger: CACATATTCTGGAGCCCTTCATTTTATTTGCTCAAT...GCTGTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | GGGTGTCATTACTATTCAGTCTTGATTGATTTTGGTCTCAGACTAGAAGATAAAGGGCTCCAGAATATGTaGTCTGTGGTCGCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCHYYSVLIDFGLRLEDKGLQNM*SVVAAP Trigger: AGGCGCAGCGACCACAGAGCACATATTCTGGAGCCC...TTTATCTTCTAGTCTGAGACCAAAATCAATCAAGACTGAATAGTAATGACACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CCA 90 bp | GAAATACAGAACACAGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTTGAAAGAAGCACGTTTGTGTaGCAGAGTCTACTTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: EIQNTGCRSTFVWQSLLERSTFV*QSLLES Trigger: TGATTCAAGTAGACTCTGCCACACAAACGTGCTTCT...TTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | GAAATACAGAACACAGGATGCAGAAGCACGTTTGTGTGGCAGAGTCTACTTGAAACACAAGAGTTTCCTTaGACCATGTACCAAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EIQNTGCRSTFVWQSLLETQEFP*TMYQAN Trigger: ATTTGCTTGGTACATGGTTCAAGGAAACTCTTGTGT...TTCAAGTAGACTCTGCCACACAAACGTGCTTCTGCATCCTGTGTTCTGTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR TCA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTGTGGCAGAGTCTACTTaGATCATCCAAAACCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCVAEST*IIQNPR Trigger: TCTTGGGTTTTGGATGATTCAAGTAGACTCTGCCAC...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR GCA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTAGATTAACTGGTTTCTaGACTTTCCATGTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCRLTGF*TFHVFV Trigger: CACAAACACATGGAAAGTGCAGAAACCAGTTAATCT...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| 3UTR CAA 72 bp | CTCATCCACAGTAATGGGTGTCATTACTATTCAGTCTaGATTGATTTTGGTCTCAGACTAGAAGATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIHSNGCHYYSV*IDFGLRLEDKN Trigger: ATTTTTATCTTCTAGTCTGAGACCAAAATCAATCAAGACTGAATAGTAATGACACCCATTACTGTGGATGAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCCAGTCCTGCCCTGCCGTCTACCAAATCCAGTGTaGAGCAAGCGTCTCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RQPSQEVIYPHTPVLPCRLPNPV*SKRLLN Trigger: GTTCAGGAGACGCTTGCTCAACACTGGATTTGGTAG...ACGGCAGGGCAGGACTGGGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGCTCCACAGAGAGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCTGTGGCAGAGTCTACTaGAATCATCCAAAACCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QCAPQRGSRPRRLSTHTPCGRVY*NHPKPK Trigger: CTTGGGTTTTGGATGATTCAAGTAGACTCTGCCACA...GGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCTCTCTGTGGAGCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGCTCCACAGAGAGGCAGCCGTCCCAGGAGGTTATCTACCCACACACCCTCTCGTCTCCAGTTCTaGATGATGATCTTGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCAPQRGSRPRRLSTHTPSRLQF*MMILCL Trigger: CAAACACAAGATCATCATCAAGAACTGGAGACGAGA...GGGTGTGTGGGTAGATAACCTCCTGGGACGGCTGCCTCTCTGTGGAGCACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CAA 90 bp | GCAAATAAAATGAAGGGCTCCAGAATATGTGCTCTGTGGTCGCTGCGCCTGGGCAACACAAGAGTTTCCTaGAACCATGTACCAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ANKMKGSRICALWSLRLGNTRVS*NHVPSK Trigger: TTTGCTTGGTACATGGTTCAAGGAAACTCTTGTGTT...GCCCAGGCGCAGCGACCACAGAGCACATATTCTGGAGCCCTTCATTTTATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CAA 90 bp | AATACATCACATAGATTAACTGGTTTCTGCACTTTCCATGTGTTTGTGGGTGGAATGATGATCTTGTGTTaGTGCCACTGCGTAGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NTSHRLTGFCTFHVFVGGMMILC*CHCVVA Trigger: GGCCACTACGCAGTGGCACAAACACAAGATCATCAT...TCCACCCACAAACACATGGAAAGTGCAGAAACCAGTTAATCTATGTGATGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS-3UTR CAA 90 bp | AAATATTTCATGAAGAAATCCCCAGGCTGGCAGTTTGTGATGAATAGTTCTTGTGATGCAGAAGCACGTTaGTGTGGCAGAGTCTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KYFMKKSPGWQFVMNSSCDAEAR*CGRVYL Trigger: CAAGTAGACTCTGCCACACAAACGTGCTTCTGCATC...ACAAGAACTATTCATCACAAACTGCCAGCCTGGGGATTTCTTCATGAAATATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS CAA 90 bp | CTTTCTGGCTTAGTGTTTCAGGTTGGTGTTTCTCGTCTCCAGTTCTaGATGATGATCTTGTGTTTGTGCCACTGCGTAGTGGCCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSGLVFQVGVSRLQF*MMILCLCHCVVARS Trigger: GCTTCGGGCCACTACGCAGTGGCACAAACACAAGATCATCATCAAGAACTGGAGACGAGAAACACCAACCTGAAACACTAAGCCAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS CCA 72 bp | GCAGACGCTTGTCCTTTCTGGCTTAGTGTTTCAGGTTaGTGTTTCTCGTCTCCAGTTCTTGATGATGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ADACPFWLSVSG*CFSSPVLDDDL Trigger: AAGATCATCATCAAGAACTGGAGACGAGAAACACCAACCTGAAACACTAAGCCAGAAAGGACAAGCGTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||
| CDS CAA 72 bp | TTAGTGTTTCAGGTTGGTGTTTCTCGTCTCCAGTTCTaGATGATGATCTTGTGTTTGTGCCACTGCGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVFQVGVSRLQF*MMILCLCHCVV Trigger: CACTACGCAGTGGCACAAACACAAGATCATCATCAAGAACTGGAGACGAGAAACACCAACCTGAAACACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000323319.7 |
||