Pregenerated sensors for CLDN17 (Homo sapiens)
Ensembl gene IDs: ENSG00000156282Ensembl transcript IDs: ENST00000286808.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACAACAGCCACACACATaGGGGCCCGGGCTGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRQQPHT*GPGLFP Trigger: TGGAAACAGCCCGGGCCCTCATGTGTGTGGCTGTTG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGCAGACCCCCTCCAATaGAGAGGACAGCAGCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRADPLQ*RGQQRL Trigger: CAAGCGCTGCTGTCCTCTTCATTGGAGGGGGTCTGC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACCCAGCTCTCGTTTCTaGCCTATGTGGATGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRPSSRF*PMWMAG Trigger: CCCAGCCATCCACATAGGTCAGAAACGAGAGCTGGG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGCTGATACTCTCCACTaGGGCAGAAGGGTTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRADTLH*GRRVVA Trigger: TGCCACAACCCTTCTGCCTCAGTGGAGAGTATCAGC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACCTGTGCACTGGACCTaGTTCATGCCACAGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRPVHWT*FMPQMP Trigger: TGGCATCTGTGGCATGAAGCAGGTCCAGTGCACAGG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGGAGGACAGCAGCGCTTaGCCAGCCAAGGAAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMEDSSA*PAKEKC Trigger: GCACTTTTCCTTGGCTGGGCAAGCGCTGCTGTCCTC...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGGAGGCAGAAGGGTTGTaGCAAGAGTCCCCACCATGC | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMEAEGL*QESPPC Trigger: GCATGGTGGGGACTCTTGCCACAACCCTTCTGCCTC...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGCTGCCAACAAAAGCTaGTACTCTCCACTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRAANKS*YSPLRQ Trigger: CTGCCTCAGTGGAGAGTATCAGCTTTTGTTGGCAGC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACAAGAGTCCCCACCATaGCAAGGAACCCAAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRQESPP*QGTQEP Trigger: TGGTTCTTGGGTTCCTTGGCATGGTGGGGACTCTTG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACCCTGGCTTGTCGGATaGAATTCATCCAGAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRPWLVG*NSSRAL Trigger: AAGGGCTCTGGATGAATTGCATCCGACAAGCCAGGG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGATTAGAGCCTGTGCACTaGACCTGCTTCATGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRLEPVH*TCFMPQ Trigger: CTGTGGCATGAAGCAGGTCCAGTGCACAGGCTCTAA...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGTCGCTTATCTGTGTGTaGCACACGGTAGCCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMSLICV*HTVARH Trigger: GTGCCTGGCTACCGTGTGCCACACACAGATAAGCGA...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGATGAAGAGGACTCCTaGAGTTCCCAGAAGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRDEEDS*SSQKVC Trigger: GCATACCTTCTGGGAACTTCAGGAGTCCTCTTCATC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGAGATGCCCGTCAGGATaGAGAGGACTCCTGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMRCPSG*RGLLKF Trigger: GAACTTCAGGAGTCCTCTTCATCCTGACGGGCATCT...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGGCCAAGGAAAAGTGCTaGTCCCAGCTCTCGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMAKEKC*SQLSFL Trigger: CAGAAACGAGAGCTGGGAGCAGCACTTTTCCTTGGC...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACGGAGTGGTAGAAGATaGTCAAGATGTAGAACGTGG | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRRSGRR*SRCRTW Trigger: CCACGTTCTACATCTTGAGCATCTTCTACCACTCCG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGAGGAGCTATAGAACTTaGATTGCAACCGGACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMRSYRT*IATGPW Trigger: CCAGGGTCCGGTTGCAATGCAAGTTCTATAGCTCCT...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAAGTTCCCAGAAGGTATaGTTTGGCCCTCTCGTTAGA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRSSQKV*FGPLVR Trigger: TCTAACGAGAGGGCCAAAGCATACCTTCTGGGAACT...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGATTGCAACCGGACCCTaGCTTGTCGGATGCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMIATGP*LVGCNS Trigger: TGAATTGCATCCGACAAGCCAGGGTCCGGTTGCAAT...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGACGGTAGCCAGGCACTaGATATCTGTACCCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMTVARH*ISVPLL Trigger: AAGCAAGGGTACAGATATCCAGTGCCTGGCTACCGT...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGGATATCTGTACCCTTaGTTCTTTCTGTTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRGYLYP*FFLLQQ Trigger: CTGCTGCAACAGAAAGAAGCAAGGGTACAGATATCC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR TCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGACCATTGCCTTTACTTTaGAGACTGGTTCAATTCGGA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRPLPLL*RLVQFG Trigger: TCCGAATTGAACCAGTCTTCAAAGTAAAGGCAATGG...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGTCTGACCTATGTGGATaGCTGGGTTGTAGAAATCTC | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMSDLCG*LGCRNL Trigger: GAGATTTCTACAACCCAGCCATCCACATAGGTCAGA...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGATCAAGATGTAGAACGTaGAAGCCTTTTGAGTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRSRCRT*KPFESR Trigger: TCTAGACTCAAAAGGCTTCCACGTTCTACATCTTGA...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR GCA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGATTGCAAGGGATAAAATaGCATTGCCTTTACTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRLQGIK*HCLYFE Trigger: TTCAAAGTAAAGGCAATGGCATTTTATCCCTTGCAA...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CCA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGTTAGAATATGAAAATTaGAGCAGCGATTGGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMLEYEN*SSDWVQ Trigger: TTGGACCCAATCGCTGCTCCAATTTTCATATTCTAA...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 90 bp | TGGCTGTCCAGCTCACCGGAATCAGAACGAAGATGCCCGTCAGGATaGAGAGGACTCCTGAAGTTCCCAGAAGGTATGCTTTGGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: WLSSSPESERRCPSG*RGLLKFPEGMLWPS Trigger: AGAGGGCCAAAGCATACCTTCTGGGAACTTCAGGAGTCCTCTTCATCCTGACGGGCATCTTCGTTCTGATTCCGGTGAGCTGGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS GCA 90 bp | CTGTTTCCAGGGCAGGCGGGAGAGCCAACAAGGAGCTATAGAACTTaGATTGCAACCGGACCCTGGCTTGTCGGATGCAATTCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LFPGQAGEPTRSYRT*IATGPWLVGCNSSR Trigger: TCTGGATGAATTGCATCCGACAAGCCAGGGTCCGGTTGCAATGCAAGTTCTATAGCTCCTTGTTGGCTCTCCCGCCTGCCCTGGAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CCA 90 bp | GTTCCCAGAAGGTATGCTTTGGCCCTCTCGTTAGAGCCTGTGCACTaGACCTGCTTCATGCCACAGATGCCAATAAGCAGGGCGATCAAG | + |
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Preference number: 5 (lower is better) Translates to: VPRRYALALSLEPVH*TCFMPQMPISRAIK Trigger: CTTGATCGCCCTGCTTATTGGCATCTGTGGCATGAAGCAGGTCCAGTGCACAGGCTCTAACGAGAGGGCCAAAGCATACCTTCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 90 bp | CACCGGAATCAGAACGAAGATGCCCGTCAGGATGAAGAGGACTCCTaGAGTTCCCAGAAGGTATGCTTTGGCCCTCTCGTTAGAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: HRNQNEDARQDEEDS*SSQKVCFGPLVRAC Trigger: ACAGGCTCTAACGAGAGGGCCAAAGCATACCTTCTGGGAACTTCAGGAGTCCTCTTCATCCTGACGGGCATCTTCGTTCTGATTCCGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS GCA 90 bp | AGAAGGTATGCTTTGGCCCTCTCGTTAGAGCCTGTGCACTGGACCTaGTTCATGCCACAGATGCCAATAAGCAGGGCGATCAAGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: RRYALALSLEPVHWT*FMPQMPISRAIKER Trigger: TCTCTCCTTGATCGCCCTGCTTATTGGCATCTGTGGCATGAAGCAGGTCCAGTGCACAGGCTCTAACGAGAGGGCCAAAGCATACCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 90 bp | TTCCCAGAGCCTCTCAAAGACAATAATGTTGCTGCCAACAAAAGCTaGTACTCTCCACTGAGGCAGAAGGGTTGTGGCAAGAGTCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: FPEPLKDNNVAANKS*YSPLRQKGCGKSPH Trigger: GTGGGGACTCTTGCCACAACCCTTCTGCCTCAGTGGAGAGTATCAGCTTTTGTTGGCAGCAACATTATTGTCTTTGAGAGGCTCTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 90 bp | TCAAAGACAATAATGTTGCTGCCAACAAAAGCTGATACTCTCCACTaGGGCAGAAGGGTTGTGGCAAGAGTCCCCACCATGCCAAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SKTIMLLPTKADTLH*GRRVVARVPTMPRN Trigger: GTTCCTTGGCATGGTGGGGACTCTTGCCACAACCCTTCTGCCTCAGTGGAGAGTATCAGCTTTTGTTGGCAGCAACATTATTGTCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CCA 90 bp | CGTATTTCTTCGCTTATCTGTGTGTGGCACACGGTAGCCAGGCACTaGATATCTGTACCCTTGCTTCTTTCTGTTGCAGCAGCAAAATCC | + |
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Preference number: 5 (lower is better) Translates to: RISSLICVWHTVARH*ISVPLLLSVAAAKS Trigger: GGATTTTGCTGCTGCAACAGAAAGAAGCAAGGGTACAGATATCCAGTGCCTGGCTACCGTGTGCCACACACAGATAAGCGAAGAAATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CCA 90 bp | GGAGGTCTTACTAAGCATTGTCGTATTTCTTCGCTTATCTGTGTGTaGCACACGGTAGCCAGGCACTGGATATCTGTACCCTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: GGLTKHCRISSLICV*HTVARHWISVPLLL Trigger: AAGAAGCAAGGGTACAGATATCCAGTGCCTGGCTACCGTGTGCCACACACAGATAAGCGAAGAAATACGACAATGCTTAGTAAGACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGAGAGGACAGCAGCGCTaGCCCAGCCAAGGAAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMRGQQR*PSQGKV Trigger: CACTTTTCCTTGGCTGGGCAAGCGCTGCTGTCCTCT...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGCAACCGGACCCTGGCTaGTCGGATGCAATTCATCCA | + |
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Preference number: 5 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMQPDPG*SDAIHP Trigger: TGGATGAATTGCATCCGACAAGCCAGGGTCCGGTTG...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGCTATAGAACTTGCATaGCAACCGGACCCTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRAIELA*QPDPGL Trigger: CAAGCCAGGGTCCGGTTGCAATGCAAGTTCTATAGC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGCCCAGAAGGTATGCTTaGGCCCTCTCGTTAGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMPRRYA*ALSLEP Trigger: AGGCTCTAACGAGAGGGCCAAAGCATACCTTCTGGG...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGATTGATGATGTTCTCCTaGGCTGCTGCCCATAACGTT | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRLMMFS*AAAHNV Trigger: AACGTTATGGGCAGCAGCCAAGGAGAACATCATCAA...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGACCATAGTCCATACTaGGAGCCAAAAGGAGGCATT | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRDHSPY*EPKGGI Trigger: AATGCCTCCTTTTGGCTCCAAGTATGGACTATGGTC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 90 bp | CCAGCCCAGCAATTTGCAAGGGATAAAATGCCATTGCCTTTACTTTaGAGACTGGTTCAATTCGGAGTGGTAGAAGATGCTCAAGATGTA | + |
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Preference number: 5 (lower is better) Translates to: PAQQFARDKMPLPLL*RLVQFGVVEDAQDV Trigger: TACATCTTGAGCATCTTCTACCACTCCGAATTGAACCAGTCTTCAAAGTAAAGGCAATGGCATTTTATCCCTTGCAAATTGCTGGGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAGAACGTGGAAGCCTTTaGAGTCTAGAGAAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRERGSL*SLEKSL Trigger: CAAAGACTTCTCTAGACTCAAAAGGCTTCCACGTTC...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAAACCAGCCCAGCAATTaGCAAGGGATAAAATGCCAT | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRNQPSN*QGIKCH Trigger: ATGGCATTTTATCCCTTGCAAATTGCTGGGCTGGTT...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGTCTCTGATGATTATATaGGCTGTCCAGCTCACCGGA | + |
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Preference number: 5 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMSLMII*AVQLTG Trigger: TCCGGTGAGCTGGACAGCCAATATAATCATCAGAGA...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAAGTCTAGAGAAGTCTTaGATGATGTTCTCCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRSLEKS*MMFSLA Trigger: AGCCAAGGAGAACATCATCAAAGACTTCTCTAGACT...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | CAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGAATGAAATTGGAGCAGCGATaGGGTCCAACAATAGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: QRLGPTIVNAFNTPEVRMKLEQR*GPTIVN Trigger: ATTGACTATTGTTGGACCCAATCGCTGCTCCAATTT...CATTCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS-3UTR CAA 90 bp | GAGCAGCGATTGGGTCCAACAATAGTCAATGCATTTAATACACCTGAAGTCAGATCAAAGACAATAATGTaGCTGCCAACAAAAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: EQRLGPTIVNAFNTPEVRSKTIM*LPTKAD Trigger: ATCAGCTTTTGTTGGCAGCAACATTATTGTCTTTGA...TCTGACTTCAGGTGTATTAAATGCATTGACTATTGTTGGACCCAATCGCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS GCA 72 bp | AAGCAGACCCCCTCCAATGAAGAGGACAGCAGCGCTTaGCCAGCCAAGGAAAAGTGCTGCTCCCAGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: KQTPSNEEDSSA*PAKEKCCSQLS Trigger: CGAGAGCTGGGAGCAGCACTTTTCCTTGGCTGGGCAAGCGCTGCTGTCCTCTTCATTGGAGGGGGTCTGCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | TTCCAGGGCAGGCGGGAGAGCCAACAAGGAGCTATAGAACTTGCATaGCAACCGGACCCTGGCTTGTCGGATGCAATTCATCCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: FQGRRESQQGAIELA*QPDPGLSDAIHPEP Trigger: GGGCTCTGGATGAATTGCATCCGACAAGCCAGGGTCCGGTTGCAATGCAAGTTCTATAGCTCCTTGTTGGCTCTCCCGCCTGCCCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS GCA 72 bp | GCTTTGGCCCTCTCGTTAGAGCCTGTGCACTGGACCTaGTTCATGCCACAGATGCCAATAAGCAGGGCGATC | + |
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Preference number: 6 (lower is better) Translates to: ALALSLEPVHWT*FMPQMPISRAI Trigger: GATCGCCCTGCTTATTGGCATCTGTGGCATGAAGCAGGTCCAGTGCACAGGCTCTAACGAGAGGGCCAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | CCCGTCAGGATGAAGAGGACTCCTGAAGTTCCCAGAAGGTATGCTTaGGCCCTCTCGTTAGAGCCTGTGCACTGGACCTGCTTCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: PVRMKRTPEVPRRYA*ALSLEPVHWTCFMP Trigger: TGGCATGAAGCAGGTCCAGTGCACAGGCTCTAACGAGAGGGCCAAAGCATACCTTCTGGGAACTTCAGGAGTCCTCTTCATCCTGACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 72 bp | TGCAGCAGCAAAATCCACAAAGCAGACCCCCTCCAATaGAGAGGACAGCAGCGCTTGCCCAGCCAAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: CSSKIHKADPLQ*RGQQRLPSQGK Trigger: TTTTCCTTGGCTGGGCAAGCGCTGCTGTCCTCTTCATTGGAGGGGGTCTGCTTTGTGGATTTTGCTGCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS GCA 72 bp | AGAACTTGCATTGCAACCGGACCCTGGCTTGTCGGATaGAATTCATCCAGAGCCCTTCCCAGAGCCTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: RTCIATGPWLVG*NSSRALPRASQ Trigger: TTGAGAGGCTCTGGGAAGGGCTCTGGATGAATTGCATCCGACAAGCCAGGGTCCGGTTGCAATGCAAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 72 bp | ATGAAGAGGACTCCTGAAGTTCCCAGAAGGTATGCTTaGGCCCTCTCGTTAGAGCCTGTGCACTGGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: MKRTPEVPRRYA*ALSLEPVHWTC Trigger: GCAGGTCCAGTGCACAGGCTCTAACGAGAGGGCCAAAGCATACCTTCTGGGAACTTCAGGAGTCCTCTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 72 bp | CAGAACGAAGATGCCCGTCAGGATGAAGAGGACTCCTaGAGTTCCCAGAAGGTATGCTTTGGCCCTCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: QNEDARQDEEDS*SSQKVCFGPLV Trigger: AACGAGAGGGCCAAAGCATACCTTCTGGGAACTTCAGGAGTCCTCTTCATCCTGACGGGCATCTTCGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 72 bp | CAACAAAAGCTGATACTCTCCACTGAGGCAGAAGGGTaGTGGCAAGAGTCCCCACCATGCCAAGGAACCCAA | + |
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Preference number: 6 (lower is better) Translates to: QQKLILSTEAEG*WQESPPCQGTQ Trigger: TTGGGTTCCTTGGCATGGTGGGGACTCTTGCCACAACCCTTCTGCCTCAGTGGAGAGTATCAGCTTTTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 72 bp | AGGCGGGAGAGCCAACAAGGAGCTATAGAACTTGCATaGCAACCGGACCCTGGCTTGTCGGATGCAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: RRESQQGAIELA*QPDPGLSDAIH Trigger: ATGAATTGCATCCGACAAGCCAGGGTCCGGTTGCAATGCAAGTTCTATAGCTCCTTGTTGGCTCTCCCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | ATCTGTGTGTGGCACACGGTAGCCAGGCACTGGATATCTGTACCCTaGCTTCTTTCTGTTGCAGCAGCAAAATCCACAAAGCAGACCCCC | + |
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Preference number: 6 (lower is better) Translates to: ICVWHTVARHWISVP*LLSVAAAKSTKQTP Trigger: GGGGGTCTGCTTTGTGGATTTTGCTGCTGCAACAGAAAGAAGCAAGGGTACAGATATCCAGTGCCTGGCTACCGTGTGCCACACACAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 72 bp | AGCTCACCGGAATCAGAACGAAGATGCCCGTCAGGATaGAGAGGACTCCTGAAGTTCCCAGAAGGTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSPESERRCPSG*RGLLKFPEGML Trigger: AAGCATACCTTCTGGGAACTTCAGGAGTCCTCTTCATCCTGACGGGCATCTTCGTTCTGATTCCGGTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CCA 72 bp | TCGCTTATCTGTGTGTGGCACACGGTAGCCAGGCACTaGATATCTGTACCCTTGCTTCTTTCTGTTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLICVWHTVARH*ISVPLLLSVAA Trigger: TGCTGCAACAGAAAGAAGCAAGGGTACAGATATCCAGTGCCTGGCTACCGTGTGCCACACACAGATAAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 72 bp | ATAATGTTGCTGCCAACAAAAGCTGATACTCTCCACTaGGGCAGAAGGGTTGTGGCAAGAGTCCCCACCATG | + |
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Preference number: 6 (lower is better) Translates to: IMLLPTKADTLH*GRRVVARVPTM Trigger: CATGGTGGGGACTCTTGCCACAACCCTTCTGCCTCAGTGGAGAGTATCAGCTTTTGTTGGCAGCAACATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CCA 72 bp | ACTAAGCATTGTCGTATTTCTTCGCTTATCTGTGTGTaGCACACGGTAGCCAGGCACTGGATATCTGTACCC | + |
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Preference number: 6 (lower is better) Translates to: TKHCRISSLICV*HTVARHWISVP Trigger: GGGTACAGATATCCAGTGCCTGGCTACCGTGTGCCACACACAGATAAGCGAAGAAATACGACAATGCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | AAGAGTCCCCACCATGCCAAGGAACCCAAGAACCAGCCCAGCAATTaGCAAGGGATAAAATGCCATTGCCTTTACTTTGAAGACTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KSPHHAKEPKNQPSN*QGIKCHCLYFEDWF Trigger: GAACCAGTCTTCAAAGTAAAGGCAATGGCATTTTATCCCTTGCAAATTGCTGGGCTGGTTCTTGGGTTCCTTGGCATGGTGGGGACTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | TTCGGAGTGGTAGAAGATGCTCAAGATGTAGAACGTGGAAGCCTTTaGAGTCTAGAGAAGTCTTTGATGATGTTCTCCTTGGCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FGVVEDAQDVERGSL*SLEKSLMMFSLAAA Trigger: GGCAGCAGCCAAGGAGAACATCATCAAAGACTTCTCTAGACTCAAAAGGCTTCCACGTTCTACATCTTGAGCATCTTCTACCACTCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS TCA 72 bp | CCTCTCAAAGACAATAATGTTGCTGCCAACAAAAGCTaGTACTCTCCACTGAGGCAGAAGGGTTGTGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PLKDNNVAANKS*YSPLRQKGCGK Trigger: CTTGCCACAACCCTTCTGCCTCAGTGGAGAGTATCAGCTTTTGTTGGCAGCAACATTATTGTCTTTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | CGTGGAAGCCTTTTGAGTCTAGAGAAGTCTTTGATGATGTTCTCCTaGGCTGCTGCCCATAACGTTTTAGTCCAAATCAGTAGCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RGSLLSLEKSLMMFS*AAAHNVLVQISSCD Trigger: GTCACAGCTACTGATTTGGACTAAAACGTTATGGGCAGCAGCCAAGGAGAACATCATCAAAGACTTCTCTAGACTCAAAAGGCTTCCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 90 bp | GCTCAAGATGTAGAACGTGGAAGCCTTTTGAGTCTAGAGAAGTCTTaGATGATGTTCTCCTTGGCTGCTGCCCATAACGTTTTAGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: AQDVERGSLLSLEKS*MMFSLAAAHNVLVQ Trigger: TTGGACTAAAACGTTATGGGCAGCAGCCAAGGAGAACATCATCAAAGACTTCTCTAGACTCAAAAGGCTTCCACGTTCTACATCTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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| CDS CAA 72 bp | CTTTTGAGTCTAGAGAAGTCTTTGATGATGTTCTCCTaGGCTGCTGCCCATAACGTTTTAGTCCAAATCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLSLEKSLMMFS*AAAHNVLVQIS Trigger: ACTGATTTGGACTAAAACGTTATGGGCAGCAGCCAAGGAGAACATCATCAAAGACTTCTCTAGACTCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286808.5 |
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