Pregenerated sensors for CLDN16 (Homo sapiens)
Ensembl gene IDs: ENSG00000113946Ensembl transcript IDs: ENST00000264734.3, ENST00000456423.2, ENST00000468220.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAACTAGATTGGAACTGCTTCAGAGAATACTGTTAAAGATACTCTaGGAAGTAATAAACAGCAATCTCGAAACGTTAATTCATGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: PTRLELLQRILLKIL*EVINSNLETLIHVV Trigger: TACTACATGAATTAACGTTTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAGCAGTTCCAATCTAGTTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAACTGGAGTGCAATGGTaGGATCTCCGCTCACTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LQRILLKILWEVINSNLETGVQW*DLRSLQ Trigger: TTGCAGTGAGCGGAGATCGCACCATTGCACTCCAGT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATACTCTCACCAGTGGCTaGTATACGAAGTTGTTATTT | + |
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Preference number: 2 (lower is better) Translates to: MSNILLGADDSVVCGHLNTLTSG*YTKLLF Trigger: AAATAACAACTTCGTATACCAGCCACTGGTGAGAGT...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATTTTAACTCTCACCAGTaGCTGGTATACGAAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: MSNILLGADDSVVCGHLNFNSHQ*LVYEVV Trigger: AACAACTTCGTATACCAGCCACTGGTGAGAGTTAAA...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAATATAGGGAAAGTGTGTaGATAAGGTGGAAGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LQRILLKILWEVINSNLEYRESV*IRWKVS Trigger: GCTAACCTTCCACCTTATGCACACACTTTCCCTATA...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAGGCTGGTATACGAAGTaGTTATTTCCTTTTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: LQRILLKILWEVINSNLEGWYTK*LFPFSV Trigger: AACAGAAAAAGGAAATAACAACTTCGTATACCAGCC...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| 3UTR CCA 72 bp | TTGGAACTGCTTCAGAGAATACTGTTAAAGATACTCTaGGAAGTAATAAACAGCAATCTCGAAACGTTAATT | + |
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Preference number: 3 (lower is better) Translates to: LELLQRILLKIL*EVINSNLETLI Trigger: AATTAACGTTTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAGCAGTTCCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | GCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGGCAGACACCAGCCCTaGCCCCACTTAAGTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: AVSVRGAEYDLAMETPAAGRHQP*PHLSGG Trigger: CCCGCCACTTAAGTGGGGCCAGGGCTGGTGTCTGCC...AGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR TCA 90 bp | CTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGGGGAAACACCCGCGGCTaGATAGGCTTTCCTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LCEGLSMTWPWKHPRLNRGNTRG*IGFPQG Trigger: TCCTTGAGGAAAGCCTATTCAGCCGCGGGTGTTTCC...CCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | CTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGGCTGGCCCCACTTAAGTaGCGGGTGTCAGTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LCEGLSMTWPWKHPRLNRLAPLK*RVSVFC Trigger: ACAGAAGACTGACACCCGCCACTTAAGTGGGGCCAG...CCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGGCTTTCCGGGCTGAGTATGACTTaGCCATGGAAACACCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: EGLSMTWPWKHPRLNRLSGLSMT*PWKHPR Trigger: CCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCC...GGAAAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGCAGCCCATCAGGATaGCAACATGGGCAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: SLCEGLSMTWPWKHPRLNSSPSG*QHGQTP Trigger: TGGTGTCTGCCCATGTTGCCATCCTGATGGGCTGCT...ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR GCA 90 bp | TGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGGCTTTTTCTCACGCCCTGCTaGAGGTGTCTTGAGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: CEGLSMTWPWKHPRLNRLFLTPC*RCLELQ Trigger: CTGCAACTCAAGACACCTGCAGCAGGGCGTGAGAAA...AAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR GCA 90 bp | GTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAACTTTTTCTCACGCCCTaGTGCAGGTGTCTTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VSVRGAEYDLAMETPAAELFLTP*CRCLEL Trigger: CAACTCAAGACACCTGCAGCAGGGCGTGAGAAAAAG...TTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATGAAGATCCCTCATTGTaGCAAGCAGCCCATCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: SLCEGLSMTWPWKHPRLNEDPSL*QAAHQD Trigger: ATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTC...ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGTATGACTTGGCCATaGAAACACCCGCGGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SLCEGLSMTWPWKHPRLNSMTWP*KHPRLN Trigger: ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACT...ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR TCA 90 bp | CCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGTGGTACCTGGCAATGTaGAAATACTGGTCTTTTACT | + |
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Preference number: 4 (lower is better) Translates to: PSLCEGLSMTWPWKHPRLWYLAM*KYWSFT Trigger: AGTAAAAGACCAGTATTTTCACATTGCCAGGTACCA...CAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR TCA 90 bp | TTGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGAAGCAAGCGATGTATTaGAGAAGATCCCTCATTGTG | + |
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Preference number: 4 (lower is better) Translates to: LAVSVRGAEYDLAMETPAKQAMY*RRSLIV Trigger: CACAATGAGGGATCTTCTTCAATACATCGCTTGCTT...CGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAACAGTCAGTCCAGGTaGCCACAATCAAAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLCEGLSMTWPWKHPRLNNSQSR*PQSKTQ Trigger: CTGGGTTTTTGATTGTGGCCACCTGGACTGACTGTT...ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR GCA 90 bp | GCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGCAGGTGTCTTGAGTTaGAGTAAGAATAATACAAAC | + |
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Preference number: 4 (lower is better) Translates to: AVSVRGAEYDLAMETPAAAGVLS*SKNNTN Trigger: GTTTGTATTATTCTTACTGCAACTCAAGACACCTGC...AGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGGCAGACACCAGCCCTaGCCCCACTTAAGTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNGRHQP*PHLSGG Trigger: CCCGCCACTTAAGTGGGGCCAGGGCTGGTGTCTGCC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATCTTGGCCTCCCAAAGTaGGGGGATTACAGACGCGAG | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNLGLPK*GDYRRE Trigger: CTCGCGTCTGTAATCCCCGCACTTTGGGAGGCCAAG...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATATCAGGATGGCAACATaGGCAGACACCAGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNIRMAT*ADTSPG Trigger: GCCAGGGCTGGTGTCTGCCCATGTTGCCATCCTGAT...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAAGCCTCCCGAGTAGCTaGGACTACAGGCACCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLESLPSS*DYRHRH Trigger: GTGGCGGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATCAGACTGGAGTGCAATaGTGCGATCTCCGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNQTGVQ*CDLRSL Trigger: CAGTGAGCGGAGATCGCACCATTGCACTCCAGTCTG...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATACCACACAGAGCCAATaGTTCCTGGGGTACCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNTTQSQ*FLGYLL Trigger: TAGCAGGTACCCCAGGAATCATTGGCTCTGTGTGGT...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGGCCTCGGCATTTTGTaGTCACCTCCAGAGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNGLGIL*SPPESH Trigger: ATGACTCTCTGGAGGTGAGCACAAAATGCCGAGGCC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGAAGATCCCTCATTGTaGCAAGCAGCCCATCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNEDPSL*QAAHQD Trigger: ATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAGGGCTGAGTATGACTTaGCCATGGAAACACCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEGLSMT*PWKHPR Trigger: CCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCC...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGATATAAGCAGCAGGTaGGAACAGCTCCAGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNDISSR*EQLQPK Trigger: TTTTGGCTGGAGCTGTTCTCACCTGCTGCTTATATC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAGGAAACACCCGCGGCTaGATAGGCTTTCCTCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEGNTRG*IGFPQG Trigger: TCCTTGAGGAAAGCCTATTCAGCCGCGGGTGTTTCC...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAACTGGCCCCACTTAAGTaGCGGGTGTCAGTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLELAPLK*RVSVFC Trigger: ACAGAAGACTGACACCCGCCACTTAAGTGGGGCCAG...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAAGCAGCCCATCAGGATaGCAACATGGGCAGACACCA | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLESSPSG*QHGQTP Trigger: TGGTGTCTGCCCATGTTGCCATCCTGATGGGCTGCT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAGACCAAGGAGCAGGGTaGGAAATCCAAACCCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEDQGAG*EIQTQL Trigger: TAGCTGGGTTTGGATTTCTCACCCTGCTCCTTGGTC...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAATTTCTCACGCCCTGCTaGAGGTGTCTTGAGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEFLTPC*RCLELQ Trigger: CTGCAACTCAAGACACCTGCAGCAGGGCGTGAGAAA...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAATTTTGGCCGTCTCTGTaGGAGGGGCTGAGTATGACT | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEFWPSL*EGLSMT Trigger: AGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAA...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATCTGCTATTAGTAACGTaGCTCCAGCAACAAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNLLLVT*LQQQSR Trigger: TCTGCTTTGTTGCTGGAGCCACGTTACTAATAGCAG...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAACTACAGCATACATTTTaGCCGTCTCTGTGCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLELQHTF*PSLCEG Trigger: CCCCTCGCACAGAGACGGCCAAAATGTATGCTGTAG...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAACATCAAAAGCATTTGTaGCGCATTCCCACCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEHQKHL*RIPTRG Trigger: GCCTCTGGTGGGAATGCGTCACAAATGCTTTTGATG...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAACTTTTTCTCACGCCCTaGTGCAGGTGTCTTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLELFLTP*CRCLEL Trigger: CAACTCAAGACACCTGCAGCAGGGCGTGAGAAAAAG...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAACCAGCTTCAAGGGATaGTCCGCAAGTATGGAATCG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLETSFKG*SASMES Trigger: CGATTCCATACTTGCGGAGCATCCCTTGAAGCTGGT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAAGTATGACTTGGCCATaGAAACACCCGCGGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLESMTWP*KHPRLN Trigger: ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATTGGTACCTGGCAATGTaGAAATACTGGTCTTTTACT | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNWYLAM*KYWSFT Trigger: AGTAAAAGACCAGTATTTTCACATTGCCAGGTACCA...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAAACAGTCAGTCCAGGTaGCCACAATCAAAAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLENSQSR*PQSKTQ Trigger: CTGGGTTTTTGATTGTGGCCACCTGGACTGACTGTT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAGATGCTCCGCAAGTATaGAATCGTACTCATCACAGG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEDAPQV*NRTHHR Trigger: CCTGTGATGAGTACGATTCCATACTTGCGGAGCATC...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAATATGCAAACACACCCTaGAACGTGCATTTTACACCC | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEYANTP*NVHFTP Trigger: GGGTGTAAAATGCACGTTTCAGGGTGTGTTTGCATA...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGAACTAATTTCTGGGTaGGTTGATATTCTTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNELISG*VDILFR Trigger: CCTGAAAAGAATATCAACTCACCCAGAAATTAGTTC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAACACACCCTGAAACGTaGATTTTACACCCTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLETHPET*ILHPCV Trigger: GACACAAGGGTGTAAAATGCACGTTTCAGGGTGTGT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR GCA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATATTCTTTTCAGGTACTaGAAGGGTACCATAAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSNILLGADDSVVCGHLNILFRY*KGTIKV Trigger: TACCTTTATGGTACCCTTGCAGTACCTGAAAAGAAT...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR TCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAAAGCAAGCGATGTATTaGAGAAGATCCCTCATTGTG | + |
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Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEKQAMY*RRSLIV Trigger: CACAATGAGGGATCTTCTTCAATACATCGCTTGCTT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAATTCTCCAACTAGATTaGAACTGCTTCAGAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LQRILLKILWEVINSNLEILQLD*NCFREY Trigger: GTATTCTCTGAAGCAGTTCCAATCTAGTTGGAGAAT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS GCA 90 bp | TCCACGAGAGAAAGCGAGCAGGGACGCAGCTCTGGTGCCTGGTCCTaGCGGGTGGTCCCCACGCCGCCAGCCGCGCGTTCCCCAACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: STRESEQGRSSGAWS*RVVPTPPAARSPTG Trigger: CCCGGTTGGGGAACGCGCGGCTGGCGGCGTGGGGACCACCCGGCAGGACCAGGCACCAGAGCTGCGTCCCTGCTCGCTTTCTCTCGTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS CCA 90 bp | AGGAGCGAGAAGATCCACGAGAGAAAGCGAGCAGGGACGCAGCTCTaGTGCCTGGTCCTGCCGGGTGGTCCCCACGCCGCCAGCCGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RSEKIHERKRAGTQL*CLVLPGGPHAASRA Trigger: CGCGCGGCTGGCGGCGTGGGGACCACCCGGCAGGACCAGGCACCAGAGCTGCGTCCCTGCTCGCTTTCTCTCGTGGATCTTCTCGCTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS GCA 90 bp | AGCGAGAAGATCCACGAGAGAAAGCGAGCAGGGACGCAGCTCTGGTaGCTGGTCCTGCCGGGTGGTCCCCACGCCGCCAGCCGCGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: SEKIHERKRAGTQLW*LVLPGGPHAASRAF Trigger: GAACGCGCGGCTGGCGGCGTGGGGACCACCCGGCAGGACCAGGCACCAGAGCTGCGTCCCTGCTCGCTTTCTCTCGTGGATCTTCTCGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS-3UTR CAA 90 bp | TGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGGAAGAAGATCCCTCATaGTGGCAAGCAGCCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: WPSLCEGLSMTWPWKHPREEDPS*WQAAHQ Trigger: CTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTC...CCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATGGGGCTGAGTATGACTaGGCCATGGAAACACCCGCG | + |
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Preference number: 5 (lower is better) Translates to: SLCEGLSMTWPWKHPRLNGAEYD*AMETPA Trigger: CGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCC...ATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS CCA 90 bp | TGGCAAGCAGCCCATCAGGATGGCAACATGGGCAGACACCAGCCCTaGCCCCACTTAAGTGGCGGGTGTCAGTCTTCTGTGTTTCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: WQAAHQDGNMGRHQP*PHLSGGCQSSVFLV Trigger: TACCAGAAACACAGAAGACTGACACCCGCCACTTAAGTGGGGCCAGGGCTGGTGTCTGCCCATGTTGCCATCCTGATGGGCTGCTTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CCA 90 bp | TCAGGATGGCAACATGGGCAGACACCAGCCCTGGCCCCACTTAAGTaGCGGGTGTCAGTCTTCTGTGTTTCTGGTACCTGGCAATGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGWQHGQTPALAPLK*RVSVFCVSGTWQCE Trigger: TTCACATTGCCAGGTACCAGAAACACAGAAGACTGACACCCGCCACTTAAGTGGGGCCAGGGCTGGTGTCTGCCCATGTTGCCATCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS-3UTR CAA 90 bp | TGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCCTGCTGCAGGTGTCTaGAGTTGCAGTAAGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: WPSLCEGLSMTWPWKHPRPAAGV*SCSKNN Trigger: ATTATTCTTACTGCAACTCAAGACACCTGCAGCAGG...CCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS CCA 90 bp | CAGCATACATTTTGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTaGCCATGGAAACACCCGCGGCTGAATAGGCTTTCCTCAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QHTFWPSLCEGLSMT*PWKHPRLNRLSSRN Trigger: ATTCCTTGAGGAAAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAATGTATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS CCA 90 bp | ACATTTTGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATaGAAACACCCGCGGCTGAATAGGCTTTCCTCAAGGAATAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TFWPSLCEGLSMTWP*KHPRLNRLSSRNKD Trigger: ATCCTTATTCCTTGAGGAAAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS TCA 90 bp | TGGAATCGTACTCATCACAGGTGCGAATCCCATCAAAAGCATTTGTaGCGCATTCCCACCAGAGGCCTCGGCATTTTGTGCTCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WNRTHHRCESHQKHL*RIPTRGLGILCSPP Trigger: TGGAGGTGAGCACAAAATGCCGAGGCCTCTGGTGGGAATGCGTCACAAATGCTTTTGATGGGATTCGCACCTGTGATGAGTACGATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS CCA 90 bp | AAAAGGCAAAGAAGCAAGCGATGTATTGAAGAAGATCCCTCATTGTaGCAAGCAGCCCATCAGGATGGCAACATGGGCAGACACCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRQRSKRCIEEDPSL*QAAHQDGNMGRHQP Trigger: GGGCTGGTGTCTGCCCATGTTGCCATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTCAATACATCGCTTGCTTCTTTGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS-3UTR CAA 90 bp | TGCGAGGGGCTGAGTATGACTTGGCCATGGAAACACCCGCGGCTGAATAGGCTTGAAGCAAGCGATGTATaGAAGAAGATCCCTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CEGLSMTWPWKHPRLNRLEASDV*KKIPHC Trigger: ACAATGAGGGATCTTCTTCAATACATCGCTTGCTTC...AAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456423.2 |
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| CDS TCA 90 bp | TGGAATCGTACTCATCACAGGTGCGAATCCCATCAAAAGCATTTGTaGCGCATTCCCACCAGAGGCCTCGGCATTTTGTGCTCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WNRTHHRCESHQKHL*RIPTRGLGILCSPS Trigger: TGAAGGTGAGCACAAAATGCCGAGGCCTCTGGTGGGAATGCGTCACAAATGCTTTTGATGGGATTCGCACCTGTGATGAGTACGATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS-3UTR CAA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATAGAGGCCTCGGCATTTaGTGCTCACCTCCAGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MSNILLGADDSVVCGHLNRGLGI*CSPPES Trigger: ACTCTCTGGAGGTGAGCACAAAATGCCGAGGCCTCT...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS TCA 90 bp | ATCAAAAACCCAGCAGAGAAAAAGGCAAAGAAGCAAGCGATGTATTaGAGAAGATCCCTCATTGTGGCAAGCAGCCCATCAGGATGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: IKNPAEKKAKKQAMY*RRSLIVASSPSGWQ Trigger: TTGCCATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTCAATACATCGCTTGCTTCTTTGCCTTTTTCTCTGCTGGGTTTTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CCA 90 bp | GCTCACCTTCACATGCTGTATGTGTTAGATCCAACCACAAGAGAATaGTTTTCCAAACAGGTGGCCAACAACGAGTTCAGTCATGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: AHLHMLYVLDPTTRE*FSKQVANNEFSHDH Trigger: GTGATCATGACTGAACTCGTTGTTGGCCACCTGTTTGGAAAACCATTCTCTTGTGGTTGGATCTAACACATACAGCATGTGAAGGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS-3UTR CAA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGAAGAAGATCCCTCATaGTGGCAAGCAGCCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: MSNILLGADDSVVCGHLNEEDPS*WQAAHQ Trigger: CTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAGGGGCTGAGTATGACTaGGCCATGGAAACACCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LQRILLKILWEVINSNLEGAEYD*AMETPA Trigger: CGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCC...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CAA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATTCTACAGCATACATTTaGGCCGTCTCTGTGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MSNILLGADDSVVCGHLNSTAYI*AVSVRG Trigger: CCCTCGCACAGAGACGGCCAAAATGTATGCTGTAGA...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CAA 90 bp | ATGTCTAATATATTGCTTGGTGCTGATGATTCAGTGGTGTGTGGGCACTTGAATGAAGCAAGCGATGTATaGAAGAAGATCCCTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: MSNILLGADDSVVCGHLNEASDV*KKIPHC Trigger: ACAATGAGGGATCTTCTTCAATACATCGCTTGCTTC...ATTCAAGTGCCCACACACCACTGAATCATCAGCACCAAGCAATATATTAGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS-3UTR CAA 90 bp | CTTCAGAGAATACTGTTAAAGATACTCTGGGAAGTAATAAACAGCAATCTCGAAAATTCTCCAACTAGATaGGAACTGCTTCAGAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: LQRILLKILWEVINSNLENSPTR*ELLQRI Trigger: TATTCTCTGAAGCAGTTCCAATCTAGTTGGAGAATT...TTCGAGATTGCTGTTTATTACTTCCCAGAGTATCTTTAACAGTATTCTCTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS GCA 72 bp | GAAAGCGAGCAGGGACGCAGCTCTGGTGCCTGGTCCTaGCGGGTGGTCCCCACGCCGCCAGCCGCGCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ESEQGRSSGAWS*RVVPTPPAARS Trigger: GGAACGCGCGGCTGGCGGCGTGGGGACCACCCGGCAGGACCAGGCACCAGAGCTGCGTCCCTGCTCGCTTTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS GCA 72 bp | ATCCACGAGAGAAAGCGAGCAGGGACGCAGCTCTGGTaGCTGGTCCTGCCGGGTGGTCCCCACGCCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IHERKRAGTQLW*LVLPGGPHAAS Trigger: GCTGGCGGCGTGGGGACCACCCGGCAGGACCAGGCACCAGAGCTGCGTCCCTGCTCGCTTTCTCTCGTGGAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS CCA 72 bp | GCCCATCAGGATGGCAACATGGGCAGACACCAGCCCTaGCCCCACTTAAGTGGCGGGTGTCAGTCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AHQDGNMGRHQP*PHLSGGCQSSV Trigger: CACAGAAGACTGACACCCGCCACTTAAGTGGGGCCAGGGCTGGTGTCTGCCCATGTTGCCATCCTGATGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CCA 72 bp | AGAAGATCCCTCATTGTGGCAAGCAGCCCATCAGGATaGCAACATGGGCAGACACCAGCCCTGGCCCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: RRSLIVASSPSG*QHGQTPALAPL Trigger: AAGTGGGGCCAGGGCTGGTGTCTGCCCATGTTGCCATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CCA 72 bp | CCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATaGAAACACCCGCGGCTGAATAGGCTTTCCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLCEGLSMTWP*KHPRLNRLSSR Trigger: CCTTGAGGAAAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CCA 72 bp | TTTTGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTaGCCATGGAAACACCCGCGGCTGAATAGGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWPSLCEGLSMT*PWKHPRLNRLS Trigger: GGAAAGCCTATTCAGCCGCGGGTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS GCA 72 bp | CCCTTGTGTCTACAGCATACATTTTGGCCGTCTCTGTaGGAGGGGCTGAGTATGACTTGGCCATGGAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: PLCLQHTFWPSL*EGLSMTWPWKH Trigger: GTGTTTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAATGTATGCTGTAGACACAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS TCA 72 bp | ACTCATCACAGGTGCGAATCCCATCAAAAGCATTTGTaGCGCATTCCCACCAGAGGCCTCGGCATTTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: THHRCESHQKHL*RIPTRGLGILC Trigger: GCACAAAATGCCGAGGCCTCTGGTGGGAATGCGTCACAAATGCTTTTGATGGGATTCGCACCTGTGATGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000468220.1 |
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| CDS CAA 90 bp | ACCCTGAAACGTGCATTTTACACCCTTGTGTCTACAGCATACATTTaGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTGGCCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TLKRAFYTLVSTAYI*AVSVRGAEYDLAME Trigger: TTCCATGGCCAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAATGTATGCTGTAGACACAAGGGTGTAAAATGCACGTTTCAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS CCA 72 bp | AGAAGCAAGCGATGTATTGAAGAAGATCCCTCATTGTaGCAAGCAGCCCATCAGGATGGCAACATGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSKRCIEEDPSL*QAAHQDGNMGR Trigger: TCTGCCCATGTTGCCATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTCAATACATCGCTTGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CCA 72 bp | GAGTTACCACCAGCTTCAAGGGATGCTCCGCAAGTATaGAATCGTACTCATCACAGGTGCGAATCCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: ELPPASRDAPQV*NRTHHRCESHQ Trigger: TTGATGGGATTCGCACCTGTGATGAGTACGATTCCATACTTGCGGAGCATCCCTTGAAGCTGGTGGTAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000468220.1 |
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| CDS CAA 72 bp | CAAAGAAGCAAGCGATGTATTGAAGAAGATCCCTCATaGTGGCAAGCAGCCCATCAGGATGGCAACATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QRSKRCIEEDPS*WQAAHQDGNMG Trigger: GCCCATGTTGCCATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTCAATACATCGCTTGCTTCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CAA 72 bp | CGTGCATTTTACACCCTTGTGTCTACAGCATACATTTaGGCCGTCTCTGTGCGAGGGGCTGAGTATGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: RAFYTLVSTAYI*AVSVRGAEYDL Trigger: CAAGTCATACTCAGCCCCTCGCACAGAGACGGCCAAAATGTATGCTGTAGACACAAGGGTGTAAAATGCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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| CDS CAA 90 bp | AGAAAAAGGCAAAGAAGCAAGCGATGTATTGAAGAAGATCCCTCATaGTGGCAAGCAGCCCATCAGGATGGCAACATGGGCAGACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RKRQRSKRCIEEDPS*WQAAHQDGNMGRHQ Trigger: CTGGTGTCTGCCCATGTTGCCATCCTGATGGGCTGCTTGCCACAATGAGGGATCTTCTTCAATACATCGCTTGCTTCTTTGCCTTTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CAA 90 bp | AAAGCCAGTCTGAGTCCCAAAACTCAAGAACTTGGAGTCCGATGTTaGAGGGCAGGAATCATAGGAGCGAGAAGATCCACGAGAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KASLSPKTQELGVRC*RAGIIGARRSTRES Trigger: GCTTTCTCTCGTGGATCTTCTCGCTCCTATGATTCCTGCCCTCAAACATCGGACTCCAAGTTCTTGAGTTTTGGGACTCAGACTGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS CCA 72 bp | CAAGAAAGCCAGTCTGAGTCCCAAAACTCAAGAACTTaGAGTCCGATGTTTGAGGGCAGGAATCATAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QESQSESQNSRT*SPMFEGRNHRS Trigger: GCTCCTATGATTCCTGCCCTCAAACATCGGACTCCAAGTTCTTGAGTTTTGGGACTCAGACTGGCTTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468220.1 |
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| CDS CCA 72 bp | AGTCATCAGCATTCACCATCCAACAGTCAGTCCAGGTaGCCACAATCAAAAACCCAGCAGAGAAAAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SHQHSPSNSQSR*PQSKTQQRKRQ Trigger: TTGCCTTTTTCTCTGCTGGGTTTTTGATTGTGGCCACCTGGACTGACTGTTGGATGGTGAATGCTGATGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000264734.3 ENST00000456423.2 |
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| CDS CAA 90 bp | AGCCAACAGGACCAACCAAATTTATATTGGATACCAAGAAATATATaGTGCAAAACCAAAGTAGAACGTTCCACATACACATCAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SQQDQPNLYWIPRNI*CKTKVERSTYTSTA Trigger: TGCTGTTGATGTGTATGTGGAACGTTCTACTTTGGTTTTGCACAATATATTTCTTGGTATCCAATATAAATTTGGTTGGTCCTGTTGGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264734.3 |
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