RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLDN14 (Homo sapiens)

Ensembl gene IDs: ENSG00000159261

Ensembl transcript IDs: ENST00000342108.2, ENST00000399135.6, ENST00000399136.5, ENST00000399137.5, ENST00000399139.5

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTaGCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACA +
Preference number: 1 (lower is better)
Translates to: KDISSHSHYFLGYKN*PEVNFVLEPLPPLT
Trigger: TGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
3UTR-3UTR TCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAAACCCCTGCCTCCATTaGCAGTCCCGCCGGGGACCC +
Preference number: 2 (lower is better)
Translates to: PCALKTFPRIHIISLDTKNPCLH*QSRRGP
Trigger: GGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTT...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
3UTR-3UTR CAA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 3 (lower is better)
Translates to: FINSHIRKVYSWITNQPHEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
3UTR-3UTR CAA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 3 (lower is better)
Translates to: PCALKTFPRIHIISLDTKEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
3UTR-3UTR CAA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 3 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGTGGTCGTGGTGGCCCTaGGCGGGGCCTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGWSWWP*AGPGRA
Trigger: GGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCA...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGGCTGCACGGCCGTGCTaGCCATGGTGCGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGAARPC*PWCGCL
Trigger: CAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGC...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGGAAGCTGCACGGCCGTaGTGGCCATGGTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGEAARP*WPWCGC
Trigger: GCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTC...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGCTCCCCTTCCCAGCCTaGCAGGGTTGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGLPFPA*QGCRAS
Trigger: GGACGCCCTGCAACCCTGCCAGGCTGGGAAGGGGAG...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGAGGAGACGGCCACCATaGACAGGAGGCCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGRRRPP*TGGRPG
Trigger: TCCTGGCCGGCCTCCTGTGCATGGTGGCCGTCTCCT...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGGCGGCAGGATGGTGGTaGTCAACGTGCCCACCATGC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGAAGWW*STCPPC
Trigger: GCATGGTGGGCACGTTGATCACCACCATCCTGCCGC...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGGRTRP*GCWCPR
Trigger: ACGTGGGCACCAACATCCTCACGGCCGTGTCCTACC...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGGCAGGGTGCCACCAATaGGCGAGAGGGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGAGCHQ*ARGTRR
Trigger: TCTCCTCGTCCCTCTCGCTCATTGGTGGCACCCTGC...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGGCTGTCCTCCGCCAGTaGGGCAGGATGGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGAVLRQ*GRMVVI
Trigger: GATCACCACCATCCTGCCGCACTGGCGGAGGACAGC...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGTGGCAAAGGTGGTCTTaGCGGGTGTGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGWQRWS*RVCPWR
Trigger: GCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCA...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGAGAGGGACGAGGAGATaGAGCCCAGGTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGRGTRR*SPGTGP
Trigger: AGGCCCTGTACCTGGGCTTCATCTCCTCGTCCCTCT...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGTCTGCACCACGTCGTTaGTGGTCCAGGAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGSAPRR*WSRRRP
Trigger: TGGCCGTCTCCTGGACCACCAACGACGTGGTGCAGA...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCGAAGCTGCACGGCCGTaGTGGCCATGGTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPEAARP*WPWCGC
Trigger: GCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTC...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGTCCAGTGCCCAAGAGTaGCCGCCAGTGGAAACAGAC +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGSSAQE*PPVETD
Trigger: GTCTGTTTCCACTGGCGGCCACTCTTGGGCACTGGA...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR CCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCGGGTGCCGCCGAGGATaGCAAAGGTGGTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPGCRRG*QRWSWR
Trigger: CCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCC...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCGGAGGCCGGCCAGGATaGAGAGGGTGCCGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTGGRPG*RGCRRG
Trigger: TCCTCGGCGGCACCCTCTTCATCCTGGCCGGCCTCC...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCTGGCCATGGTGCGGCTaGCTGCCTAGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTWPWCG*LPRPAG
Trigger: CCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCA...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGTGGCCATGGTGCGGCTaGCTGCCTAGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGWPWCG*LPRPAG
Trigger: CCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCA...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCTGCGCCCTGACCACCTaGCCACAGCGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPCALTT*PQRLCP
Trigger: AGGACACAGTCGCTGTGGGCAGGTGGTCAGGGCGCA...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCGCACCACGTCGTTGGTaGTCCAGGAGACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPAPRRW*SRRRPP
Trigger: TGGTGGCCGTCTCCTGGACCACCAACGACGTGGTGC...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGTTCCCTCCTGCGCCCTaGCCACCTGCCCACAGCGAC +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGFPPAP*PPAHSD
Trigger: GTCGCTGTGGGCAGGTGGTCAGGGCGCAGGAGGGAA...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCGAAGCTGCACGGCCGTaGTGGCCATGGTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTEAARP*WPWCGC
Trigger: GCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTC...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCTCTGCACCACGTCGTTaGTGGTCCAGGAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPSAPRR*WSRRRP
Trigger: TGGCCGTCTCCTGGACCACCAACGACGTGGTGCAGA...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGGGGTGCCGCCGAGGATaGCAAAGGTGGTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGGCRRG*QRWSWR
Trigger: CCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCC...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCGTCTTTGTAGGCAGCTaGTGGCTGGTAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPVFVGS*WLVGRC
Trigger: GCACCTGCCTACCAGCCACCAGCTGCCTACAAAGAC...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCTGTACCCGCTGTGCGTaGCCGAGGTCACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTCTRCA*PRSLRG
Trigger: CCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACA...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCGGGAGAAGCAGGCTGTaGGGACTCACACGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPGRSRL*GLTRSR
Trigger: ACGACTACGTGTGAGTCCCCACAGCCTGCTTCTCCC...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
3UTR CAA 72 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPP*TVPPGTQPTAA
Trigger: GGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGGCAGGGTGCCACCAATaGGCGAGAGGGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGAGCHQ*ARGTRR
Trigger: TCTCCTCGTCCCTCTCGCTCATTGGTGGCACCCTGC...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCGCTGTCCTCCGCCAGTaGGGCAGGATGGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTAVLRQ*GRMVVI
Trigger: GATCACCACCATCCTGCCGCACTGGCGGAGGACAGC...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCAGCCTGTACCCGCTGTaGGTGGCCGAGGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTSLYPL*VAEVTE
Trigger: CTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCT...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCAATGCACGATACACCTaGACCTGGGCATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPNARYT*TWASPS
Trigger: GGAAGGAGATGCCCAGGTTCAGGTGTATCGTGCATT...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGCTTGCTGGTCTCCAGTaGCCAAGAGTGGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGLAGLQ*PRVAAS
Trigger: ACTGGCGGCCACTCTTGGGCACTGGAGACCAGCAAG...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR CCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGCGAGGATGGCAAAGGTaGTCTTGGCGGGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGRGWQR*SWRVCP
Trigger: AGGGCACACCCGCCAAGACCACCTTTGCCATCCTCG...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAAACCAACCCCACTaGCCAAACTCCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPTNQPH*PNSQVT
Trigger: AGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGT...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCCATGGTGCGGCTGCCTaGCTAGGCCAGCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPHGAAA*LGQPGS
Trigger: GCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATG...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAATGGCCATGGTGCGGCTaGCTGCCTAGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQWPWCG*LPRPAG
Trigger: CCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCA...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGCAGTGGAAACAGACCTaGTGTTCTAAATCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGQWKQT*CSKSQF
Trigger: AAACTGAGATTTAGAACACCAGGTCTGTTTCCACTG...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR TCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCAGGTGCCTGGCTCGTaGCTTCTGCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPQVPGS*LLPGWA
Trigger: AGCCCAGCCAGGCAGAAGTCACGAGCCAGGCACCTG...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR TCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAACCCCTGCCTCCATTaGCAGTCCCGCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTNPCLH*QSRRGP
Trigger: GGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTT...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCAGTCCAGCCTACGCCTaGCCAGGCTCTCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPSPAYA*PGSRLR
Trigger: CCGGAGCCGAGAGCCTGGGCAGGCGTAGGCTGGACT...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAAACTTCATGCCGCTaGGCAGCAGCGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTQTSCR*AAAGCR
Trigger: TCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTG...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCTGGTCGTGGTGGCCCTaGGCGGGGCCTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVWSWWP*AGPGRA
Trigger: GGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCA...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCTTGCAGTGGTCGTGGTaGCCCTGGGCGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPLQWSW*PWAGPG
Trigger: ACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAA...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGGTGCGGTGTTTGCAGTaGTCGTGGTGGCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPVRCLQ*SWWPWA
Trigger: CGCCCAGGGCCACCACGACCACTGCAAACACCGCAC...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCCGCAAGGTTTATTCCTaGATCACAAACCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPRKVYS*ITNQPH
Trigger: GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCG...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGTTAGAATGGCCTGCGTaGGCACACGTGCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGLEWPA*AHVPLG
Trigger: ACCAAGTGGCACGTGTGCCCACGCAGGCCATTCTAA...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPGRTRP*GCWCPR
Trigger: ACGTGGGCACCAACATCCTCACGGCCGTGTCCTACC...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCATGGTGCGGCTGCCTaGCTAGGCCAGCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVHGAAA*LGQPGS
Trigger: GCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATG...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTTGGCCATGGTGCGGCTaGCTGCCTAGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSWPWCG*LPRPAG
Trigger: CCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCA...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCCGCAGGCGCAGGCTATaGCCGAGAGCAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTRRRRL*PRAGRR
Trigger: TCTCCTGCCTGCTCTCGGGCATAGCCTGCGCCTGCG...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGGGCAGGTGCGGTGTTTaGAGTGGTCGTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPGRCGV*SGRGGP
Trigger: AGGGCCACCACGACCACTGCAAACACCGCACCTGCC...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCCCTCCTGGGCGGCTaGACACCAGCTCATGGCCGC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVPLLGG*TPAHGR
Trigger: GCGGCCATGAGCTGGTGTGCAGCCGCCCAGGAGGGG...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000399136.5
CDS-3UTR CCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCAAACAAGAGGCCATATaGTTTGGCTGGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTKQEAI*FGWAGW
Trigger: CCACCCAGCCCAGCCAAACCATATGGCCTCTTGTTT...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGTGGCAAAGGTGGTCTTaGCGGGTGTGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPWQRWS*RVCPWR
Trigger: GCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCA...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAAGGGTGCCGCCGAGGATaGCAAAGGTGGTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQGCRRG*QRWSWR
Trigger: CCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCC...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCTTGCAGTGGTCGTGGTaGCCCTGGGCGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASLQWSW*PWAGPG
Trigger: ACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAA...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCTGTACCCGCTGTGCGTaGCCGAGGTCACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPCTRCA*PRSLRG
Trigger: CCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACA...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGAACCCCTGCCTCCATTaGCAGTCCCGCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLNPCLH*QSRRGP
Trigger: GGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTT...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCAACCCCTGCCTCCATTaGCAGTCCCGCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVNPCLH*QSRRGP
Trigger: GGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTT...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACAAACCAACCCCACTaGCCAAACTCCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGTNQPH*PNSQVT
Trigger: AGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGT...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCGGCCTTGCAGCCCCGTaGTGCTGTGTCCTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTGLAAP*CCVLSQ
Trigger: TTGGCTGAGGACACAGCAGCACGGGGCTGCAAGGCC...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR GCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAGGAAGCCCAGAAGCTaGACGGCCGTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTRKPRS*TAVLAM
Trigger: CATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCCT...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCTGGTCTTGGCGGGTGTaGCCTTGGCGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVWSWRV*PWRSAC
Trigger: GCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCA...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCGGCAGGTGCGGTGTTTaGAGTGGTCGTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTGRCGV*SGRGGP
Trigger: AGGGCCACCACGACCACTGCAAACACCGCACCTGCC...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCTGCGCCCTGACCACCTaGCCACAGCGACTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPCALTT*PQRLCP
Trigger: AGGACACAGTCGCTGTGGGCAGGTGGTCAGGGCGCA...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCTCTTGGCAGGTGCCTaGCTCGTGACTTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPLLAGA*LVTSAW
Trigger: CCAGGCAGAAGTCACGAGCCAGGCACCTGCCAAGAG...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR CCA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCGGGTGCCGCCGAGGATaGCAAAGGTGGTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASGCRRG*QRWSWR
Trigger: CCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCC...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGCAGCCGGAGCCGCTCTaGAGCCTGGCTGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLQPEPL*SLAGLQ
Trigger: CTGGAGTCCAGCCAGGCTCCAGAGCGGCTCCGGCTG...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAAAGAGGGACGAGGAGATaGAGCCCAGGTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQRGTRR*SPGTGP
Trigger: AGGCCCTGTACCTGGGCTTCATCTCCTCGTCCCTCT...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCGACTGTGTCCTCCTCTaGGCCACCACCTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASDCVLL*ATTWRL
Trigger: CAACCGCCAGGTGGTGGCTCAGAGGAGGACACAGTC...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399135.6
CDS-3UTR TCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTTTCCCTCCTGCGCCCTaGCCACCTGCCCACAGCGAC +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPFPPAP*PPAHSD
Trigger: GTCGCTGTGGGCAGGTGGTCAGGGCGCAGGAGGGAA...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCCCTGGCTGGGCTGCCTaGCTCTCTCAGCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPPGWAA*LSQLFP
Trigger: TGGGAAAAGCTGAGAGAGGCAGGCAGCCCAGCCAGG...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR GCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAACAGATCTCTGGGCCTTaGAGCCCCGTGCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQQISGP*SPVLLC
Trigger: ACACAGCAGCACGGGGCTGCAAGGCCCAGAGATCTG...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR GCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTACGCCGCTCCTCAGGTaGCAGCCGGAGCCCTCATAC +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSTPLLR*QPEPSY
Trigger: GTATGAGGGCTCCGGCTGGCACCTGAGGAGCGGCGT...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR GCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTTGGTCTTGGCGGGTGTaGCCTTGGCGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPWSWRV*PWRSAC
Trigger: GCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCA...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACAGGAGACGGCCACCATaGACAGGAGGCCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHRRRPP*TGGRPG
Trigger: TCCTGGCCGGCCTCCTGTGCATGGTGGCCGTCTCCT...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGTTGTGTCCAGATCTCTaGGCCTTGCAGCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPLCPDL*ALQPRA
Trigger: AGCACGGGGCTGCAAGGCCCAGAGATCTGGACACAA...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR CCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACGCTGCACGGCCGTGCTaGCCATGGTGCGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYAARPC*PWCGCL
Trigger: CAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGC...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGTGGCGGGTGTGCCCTTaGCGCAGCGCGTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLWRVCP*RSACTS
Trigger: TGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCA...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTTGGCGGGTGTGCCCTTaGCGCAGCGCGTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSWRVCP*RSACTS
Trigger: TGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCA...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCTGGCAAAGGTGGTCTTaGCGGGTGTGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASWQRWS*RVCPWR
Trigger: GCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCA...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCCGAGGATGGCAAAGGTaGTCTTGGCGGGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTRGWQR*SWRVCP
Trigger: AGGGCACACCCGCCAAGACCACCTTTGCCATCCTCG...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAACGAGGATGGCAAAGGTaGTCTTGGCGGGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQRGWQR*SWRVCP
Trigger: AGGGCACACCCGCCAAGACCACCTTTGCCATCCTCG...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACGGGTGCCGCCGAGGATaGCAAAGGTGGTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHGCRRG*QRWSWR
Trigger: CCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCC...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGTTTGCAGTGGTCGTaGTGGCCCTGGGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHCLQWS*WPWAGP
Trigger: AGGCCCCGCCCAGGGCCACCACGACCACTGCAAACA...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGTACCCGCTGTGCGTaGCCGAGGTCACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHCTRCA*PRSLRG
Trigger: CCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACA...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCACTTCCCTGTGTCCTaGAACTGCCTGATTGTTGTA +
Preference number: 4 (lower is better)
Translates to: EVNFVLEPLPPLTVPPGTHFPVS*NCLIVV
Trigger: TACAACAATCAGGCAGTTCCAGGACACAGGGAAGTG...GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCGGCTCCGGGTCCATTaGCTGTTCACACTCACTTCC +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPRLRVH*LFTLTS
Trigger: GGAAGTGAGTGTGAACAGCCAATGGACCCGGAGCCG...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGTGCACTTCATCCCGATaGCGGCGCAGGCGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLCTSSR*RRRRRL
Trigger: TAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCA...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGCACTTCATCCCGATaGCGGCGCAGGCGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHCTSSR*RRRRRL
Trigger: TAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCA...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACGCAGGGTGCCACCAATaGGCGAGAGGGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHAGCHQ*ARGTRR
Trigger: TCTCCTCGTCCCTCTCGCTCATTGGTGGCACCCTGC...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACACATGGTGCGGCTGCCTaGCTAGGCCAGCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTHGAAA*LGQPGS
Trigger: GCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATG...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACCCGTGCTGGCCATGGTaGGGCTGCCTGCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYPCWPW*GCLPRP
Trigger: TGGCCTAGGCAGGCAGCCGCACCATGGCCAGCACGG...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTAGGAGACGGCCACCATaGACAGGAGGCCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPRRRPP*TGGRPG
Trigger: TCCTGGCCGGCCTCCTGTGCATGGTGGCCGTCTCCT...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAGCTGCACGGCCGTGCTaGCCATGGTGCGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTAARPC*PWCGCL
Trigger: CAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGC...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCTGGCAAAGGTGGTCTTaGCGGGTGTGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVWQRWS*RVCPWR
Trigger: GCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCA...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGGCACCACGTCGTTGGTaGTCCAGGAGACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLAPRRW*SRRRPP
Trigger: TGGTGGCCGTCTCCTGGACCACCAACGACGTGGTGC...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAATGGTCGTGGTGGCCCTaGGCGGGGCCTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKWSWWP*AGPGRA
Trigger: GGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCA...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAATTTGTAGGCAGCTGGTaGCTGGTAGGCAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQFVGSW*LVGRCG
Trigger: ACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAA...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGGGAGAAGCAGGCTGTaGGGACTCACACGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPGRSRL*GLTRSR
Trigger: ACGACTACGTGTGAGTCCCCACAGCCTGCTTCTCCC...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACCAGCCGGAGCCGCTCTaGAGCCTGGCTGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYQPEPL*SLAGLQ
Trigger: CTGGAGTCCAGCCAGGCTCCAGAGCGGCTCCGGCTG...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPGRTRP*GCWCPR
Trigger: ACGTGGGCACCAACATCCTCACGGCCGTGTCCTACC...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTAGAGGGACGAGGAGATaGAGCCCAGGTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSRGTRR*SPGTGP
Trigger: AGGCCCTGTACCTGGGCTTCATCTCCTCGTCCCTCT...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAACCCCTGCCTCCATTaGCAGTCCCGCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTNPCLH*QSRRGP
Trigger: GGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTT...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCCTCTCTTGGCAGGTaGCTGGCTCGTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVPSLGR*LARDFC
Trigger: GCAGAAGTCACGAGCCAGGCACCTGCCAAGAGAGGG...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTCATGGTGCGGCTGCCTaGCTAGGCCAGCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVHGAAA*LGQPGS
Trigger: GCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATG...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAACATGGTGCGGCTGCCTaGCTAGGCCAGCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKHGAAA*LGQPGS
Trigger: GCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATG...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTTGGCCATGGTGCGGCTaGCTGCCTAGGCCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVWPWCG*LPRPAG
Trigger: CCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCA...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACACCGTGCTGGCCATGGTaGGGCTGCCTGCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTPCWPW*GCLPRP
Trigger: TGGCCTAGGCAGGCAGCCGCACCATGGCCAGCACGG...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTAGGAAGCCCAGAAGCTaGACGGCCGTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPRKPRS*TAVLAM
Trigger: CATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCCT...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCTCTGGCACTGGTAGATaGCTGTGCTGTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPSGTGR*LCCATH
Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGA...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCTCTGGCACTGGTAGATaGCTGTGCTGTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTSGTGR*LCCATH
Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGA...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACCGCAGGCGCAGGCTATaGCCGAGAGCAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYRRRRL*PRAGRR
Trigger: TCTCCTGCCTGCTCTCGGGCATAGCCTGCGCCTGCG...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAGAGGCCATATGGTTTaGCTGGGCTGGGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTRGHMV*LGWVVS
Trigger: AGAGACCACCCAGCCCAGCCAAACCATATGGCCTCT...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTGCTGCACGGCCGTGCTaGCCATGGTGCGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVAARPC*PWCGCL
Trigger: CAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGC...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTGCACCACGTCGTTGGTaGTCCAGGAGACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPAPRRW*SRRRPP
Trigger: TGGTGGCCGTCTCCTGGACCACCAACGACGTGGTGC...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCCAAACTTCATGCCGCTaGGCAGCAGCGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPQTSCR*AAAGCR
Trigger: TCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTG...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTATGGTCGTGGTGGCCCTaGGCGGGGCCTGGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVWSWWP*AGPGRA
Trigger: GGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCA...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAATGTTTGCAGTGGTCGTaGTGGCCCTGGGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKCLQWS*WPWAGP
Trigger: AGGCCCCGCCCAGGGCCACCACGACCACTGCAAACA...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACGTGCGGTGTTTGCAGTaGTCGTGGTGGCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYVRCLQ*SWWPWA
Trigger: CGCCCAGGGCCACCACGACCACTGCAAACACCGCAC...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGAAGAGTGGCCGCCAGTaGAAACAGACCTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPKSGRQ*KQTWCS
Trigger: AGAACACCAGGTCTGTTTCCACTGGCGGCCACTCTT...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR TCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAGGAGGCCGGCCAGGATaGAGAGGGTGCCGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVGGRPG*RGCRRG
Trigger: TCCTCGGCGGCACCCTCTTCATCCTGGCCGGCCTCC...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTAGAGGGACGAGGAGATaGAGCCCAGGTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPRGTRR*SPGTGP
Trigger: AGGCCCTGTACCTGGGCTTCATCTCCTCGTCCCTCT...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACGCAGGGTGCCACCAATaGGCGAGAGGGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYAGCHQ*ARGTRR
Trigger: TCTCCTCGTCCCTCTCGCTCATTGGTGGCACCCTGC...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAAGCAGGGTGCCACCAATaGGCGAGAGGGACGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKAGCHQ*ARGTRR
Trigger: TCTCCTCGTCCCTCTCGCTCATTGGTGGCACCCTGC...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTAACCCCTGCCTCCATTaGCAGTCCCGCCGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVNPCLH*QSRRGP
Trigger: GGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTT...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAAAATGCACGATACACCTaGACCTGGGCATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQNARYT*TWASPS
Trigger: GGAAGGAGATGCCCAGGTTCAGGTGTATCGTGCATT...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCTTGCAGCCCCGTGCTaGTGTGTCCTCAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPLAAPC*CVLSQV
Trigger: GACTTGGCTGAGGACACAGCAGCACGGGGCTGCAAG...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAACCGTGCTGGCCATGGTaGGGCTGCCTGCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKPCWPW*GCLPRP
Trigger: TGGCCTAGGCAGGCAGCCGCACCATGGCCAGCACGG...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAGGAAGCCCAGAAGCTaGACGGCCGTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYRKPRS*TAVLAM
Trigger: CATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCCT...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTTGGTCTTGGCGGGTGTaGCCTTGGCGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVWSWRV*PWRSAC
Trigger: GCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCA...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAACGCCGCTCCTCAGGTaGCAGCCGGAGCCATGCAGA +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTTPLLR*QPEPCR
Trigger: TCTGCATGGCTCCGGCTGGCACCTGAGGAGCGGCGT...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399135.6
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAACGCCGCTCCTCAGGTaGCAGCCGGAGCCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKTPLLR*QPEPVP
Trigger: CGGAACTGGCTCCGGCTGGCACCTGAGGAGCGGCGT...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS-3UTR GCA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAAACGCCGCTCCTCAGGTaGCAGCCGGAGCCCTTCATT +
Preference number: 4 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKTPLLR*QPEPFI
Trigger: AATGAAGGGCTCCGGCTGGCACCTGAGGAGCGGCGT...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR CCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAGCTGCACGGCCGTGCTaGCCATGGTGCGGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVAARPC*PWCGCL
Trigger: CAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGC...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCGAGGATGGCAAAGGTaGTCTTGGCGGGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPRGWQR*SWRVCP
Trigger: AGGGCACACCCGCCAAGACCACCTTTGCCATCCTCG...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTTTGCAGTGGTCGTGGTaGCCCTGGGCGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVLQWSW*PWAGPG
Trigger: ACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAA...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCTTTGTAGGCAGCTGGTaGCTGGTAGGCAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVFVGSW*LVGRCG
Trigger: ACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAA...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGTTTGTAGGCAGCTGGTaGCTGGTAGGCAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLFVGSW*LVGRCG
Trigger: ACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAA...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACGGGAGAAGCAGGCTGTaGGGACTCACACGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHGRSRL*GLTRSR
Trigger: ACGACTACGTGTGAGTCCCCACAGCCTGCTTCTCCC...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCGGCTCCGGGTCCATTaGCTGTTCACACTCACTTCC +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSRLRVH*LFTLTS
Trigger: GGAAGTGAGTGTGAACAGCCAATGGACCCGGAGCCG...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGGAGGCCGGCCAGGATaGAGAGGGTGCCGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCGGRPG*RGCRRG
Trigger: TCCTCGGCGGCACCCTCTTCATCCTGGCCGGCCTCC...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTACGCCGCTCCTCAGGTaGCAGCCGGAGCCCTCATAC +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVTPLLR*QPEPSY
Trigger: GTATGAGGGCTCCGGCTGGCACCTGAGGAGCGGCGT...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR GCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCGAAGCTGCACGGCCGTaGTGGCCATGGTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTEAARP*WPWCGC
Trigger: GCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTC...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCAGAAGCTGCACGGCCGTaGTGGCCATGGTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSEAARP*WPWCGC
Trigger: GCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTC...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTCTGGCACTGGTAGATaGCTGTGCTGTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHSGTGR*LCCATH
Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGA...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTCGCAGGCGCAGGCTATaGCCGAGAGCAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVRRRRL*PRAGRR
Trigger: TCTCCTGCCTGCTCTCGGGCATAGCCTGCGCCTGCG...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAACGCAGGCGCAGGCTATaGCCGAGAGCAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKRRRRL*PRAGRR
Trigger: TCTCCTGCCTGCTCTCGGGCATAGCCTGCGCCTGCG...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTATGGTCTTGGCGGGTGTaGCCTTGGCGCAGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVWSWRV*PWRSAC
Trigger: GCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCA...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAGGCAGGTGCGGTGTTTaGAGTGGTCGTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTGRCGV*SGRGGP
Trigger: AGGGCCACCACGACCACTGCAAACACCGCACCTGCC...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAGCCTGTACCCGCTGTaGGTGGCCGAGGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTSLYPL*VAEVTE
Trigger: CTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCT...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCTTCCTTAGAATGGCCTaGGTGGGCACACGTGCCACT +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVFLRMA*VGTRAT
Trigger: AGTGGCACGTGTGCCCACGCAGGCCATTCTAAGGAA...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAACCTGTTCAGGTCCCTTaGCAGCCGGAGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKPVQVP*QPEPLW
Trigger: CCAGAGCGGCTCCGGCTGGCAAGGGACCTGAACAGG...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTCCTGTTCAGGTCCCTTaGCAGCCGGAGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVPVQVP*QPEPLW
Trigger: CCAGAGCGGCTCCGGCTGGCAAGGGACCTGAACAGG...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCAGAGGCCATATGGTTTaGCTGGGCTGGGTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVRGHMV*LGWVVS
Trigger: AGAGACCACCCAGCCCAGCCAAACCATATGGCCTCT...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACTCTGCACCACGTCGTTaGTGGTCCAGGAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYSAPRR*WSRRRP
Trigger: TGGCCGTCTCCTGGACCACCAACGACGTGGTGCAGA...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACCAAACTTCATGCCGCTaGGCAGCAGCGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHQTSCR*AAAGCR
Trigger: TCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTG...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCAAACTTCATGCCGCTaGGCAGCAGCGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVQTSCR*AAAGCR
Trigger: TCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTG...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGCAAACTTCATGCCGCTaGGCAGCAGCGGGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLQTSCR*AAAGCR
Trigger: TCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTG...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTGTGCGGTGTTTGCAGTaGTCGTGGTGGCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVVRCLQ*SWWPWA
Trigger: CGCCCAGGGCCACCACGACCACTGCAAACACCGCAC...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAATGTACCCGCTGTGCGTaGCCGAGGTCACTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKCTRCA*PRSLRG
Trigger: CCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACA...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTGGGAGAAGCAGGCTGTaGGGACTCACACGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPGRSRL*GLTRSR
Trigger: ACGACTACGTGTGAGTCCCCACAGCCTGCTTCTCCC...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCACTCCCCTTCCCAGCCTaGCAGGGTTGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSLPFPA*QGCRAS
Trigger: GGACGCCCTGCAACCCTGCCAGGCTGGGAAGGGGAG...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTTTAGAATGGCCTGCGTaGGCACACGTGCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSLEWPA*AHVPLG
Trigger: ACCAAGTGGCACGTGTGCCCACGCAGGCCATTCTAA...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVGRTRP*GCWCPR
Trigger: ACGTGGGCACCAACATCCTCACGGCCGTGTCCTACC...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCACAAACCAACCCCACTaGCCAAACTCCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASTNQPH*PNSQVT
Trigger: AGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGT...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTACTGGCTCGTGACTTCTaGCTGGCTGGGCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVLARDF*LAGLPA
Trigger: GGCAGGCAGCCCAGCCAGGCAGAAGTCACGAGCCAG...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR GCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTCCGTGCTGGCCATGGTaGGGCTGCCTGCCTAGGCCA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCPCWPW*GCLPRP
Trigger: TGGCCTAGGCAGGCAGCCGCACCATGGCCAGCACGG...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACACTGGTAGATGCCTGTaGTGTGCCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHTGRCL*CATHTP
Trigger: TGGAGTGTGTGTGGCACAGCACAGGCATCTACCAGT...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAGGCAGGTGCGGTGTTTaGAGTGGTCGTGGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKGRCGV*SGRGGP
Trigger: AGGGCCACCACGACCACTGCAAACACCGCACCTGCC...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTAGTCCAGCCTACGCCTaGCCAGGCTCTCGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCSPAYA*PGSRLR
Trigger: CCGGAGCCGAGAGCCTGGGCAGGCGTAGGCTGGACT...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAACCAGCCTGGCAGGGTTaGAGGGCGTCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKPAWQG*RASIVQ
Trigger: CTGGACTATGGACGCCCTGCAACCCTGCCAGGCTGG...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTCCAGCCTGGCAGGGTTaGAGGGCGTCCATAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVPAWQG*RASIVQ
Trigger: CTGGACTATGGACGCCCTGCAACCCTGCCAGGCTGG...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCTGGCGGGTGTGCCCTTaGCGCAGCGCGTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTWRVCP*RSACTS
Trigger: TGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCA...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAATGGCAAAGGTGGTCTTaGCGGGTGTGCCCTTGGCGC +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKWQRWS*RVCPWR
Trigger: GCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCA...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACACGAGGATGGCAAAGGTaGTCTTGGCGGGTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTRGWQR*SWRVCP
Trigger: AGGGCACACCCGCCAAGACCACCTTTGCCATCCTCG...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAGCACCACGTCGTTGGTaGTCCAGGAGACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKAPRRW*SRRRPP
Trigger: TGGTGGCCGTCTCCTGGACCACCAACGACGTGGTGC...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAATTGCAGTGGTCGTGGTaGCCCTGGGCGGGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: KDISSHSHYFLGYKNCPELQWSW*PWAGPG
Trigger: ACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAA...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCTGTTTGCAGTGGTCGTaGTGGCCCTGGGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTCLQWS*WPWAGP
Trigger: AGGCCCCGCCCAGGGCCACCACGACCACTGCAAACA...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTATGTTTGCAGTGGTCGTaGTGGCCCTGGGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVCLQWS*WPWAGP
Trigger: AGGCCCCGCCCAGGGCCACCACGACCACTGCAAACA...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAAGTCTTTGTAGGCAGCTaGTGGCTGGTAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKVFVGS*WLVGRC
Trigger: GCACCTGCCTACCAGCCACCAGCTGCCTACAAAGAC...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACGTCTTTGTAGGCAGCTaGTGGCTGGTAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYVFVGS*WLVGRC
Trigger: GCACCTGCCTACCAGCCACCAGCTGCCTACAAAGAC...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAACGCAAGGTTTATTCCTaGATCACAAACCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: TATSARFIPGSQTNPTDQRKVYS*ITNQPH
Trigger: GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCG...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCAGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGT +
Preference number: 4 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSGRTRP*GCWCPR
Trigger: ACGTGGGCACCAACATCCTCACGGCCGTGTCCTACC...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCATGCACTTCATCCCGATaGCGGCGCAGGCGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSCTSSR*RRRRRL
Trigger: TAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCA...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCTGCACTTCATCCCGATaGCGGCGCAGGCGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTCTSSR*RRRRRL
Trigger: TAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCA...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCAGCTGTCCTCCGCCAGTaGGGCAGGATGGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSAVLRQ*GRMVVI
Trigger: GATCACCACCATCCTGCCGCACTGGCGGAGGACAGC...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACTCTGGCACTGGTAGATaGCTGTGCTGTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYSGTGR*LCCATH
Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGA...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTCGCAGGCGCAGGCTATaGCCGAGAGCAGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCRRRRL*PRAGRR
Trigger: TCTCCTGCCTGCTCTCGGGCATAGCCTGCGCCTGCG...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAAGGAGACGGCCACCATaGACAGGAGGCCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KDISSHSHYFLGYKNCPERRRPP*TGGRPG
Trigger: TCCTGGCCGGCCTCCTGTGCATGGTGGCCGTCTCCT...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCAAGCCTGTACCCGCTGTaGGTGGCCGAGGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSSLYPL*VAEVTE
Trigger: CTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCT...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAACTCCAGCTCCCATGTaGAAGAGGACTCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTTPAPM*KRTQPG
Trigger: TCCCGGCTGAGTCCTCTTGCACATGGGAGCTGGAGT...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTTGGCGGGTGTGCCCTTaGCGCAGCGCGTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCWRVCP*RSACTS
Trigger: TGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCA...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGTGCGGTGTTTGCAGTaGTCGTGGTGGCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCVRCLQ*SWWPWA
Trigger: CGCCCAGGGCCACCACGACCACTGCAAACACCGCAC...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTGTCCAGTGCTATATCTaGAAGTTCTTCCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPVQCYI*KFFRSS
Trigger: GGAGCTCCGGAAGAACTTTCAGATATAGCACTGGAC...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR TCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTTGCACTTCATCCCGATaGCGGCGCAGGCGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCCTSSR*RRRRRL
Trigger: TAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCA...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR TCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAGAGGGACGAGGAGATaGAGCCCAGGTACAGGGCCT +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVRGTRR*SPGTGP
Trigger: AGGCCCTGTACCTGGGCTTCATCTCCTCGTCCCTCT...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTAGGAAGCCCAGAAGCTaGACGGCCGTGCTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCRKPRS*TAVLAM
Trigger: CATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCCT...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGTCCTCCGCCAGTaGGGCAGGATGGTGGTGATC +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCAVLRQ*GRMVVI
Trigger: GATCACCACCATCCTGCCGCACTGGCGGAGGACAGC...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACACTGGTAGATGCCTGTaGTGTGCCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYTGRCL*CATHTP
Trigger: TGGAGTGTGTGTGGCACAGCACAGGCATCTACCAGT...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAAGCCTGTACCCGCTGTaGGTGGCCGAGGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: KDISSHSHYFLGYKNCPESLYPL*VAEVTE
Trigger: CTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCT...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTACTCCAGCTCCCATGTaGAAGAGGACTCAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVTPAPM*KRTQPG
Trigger: TCCCGGCTGAGTCCTCTTGCACATGGGAGCTGGAGT...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAAGTGTCAGTAGGAGAGTaGAGACTGCGGCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKVSVGE*RLRLQQ
Trigger: CTGTTGAAGCCGCAGTCTCCACTCTCCTACTGACAC...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCACCACGTCGTTGGTaGTCCAGGAGACGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCAPRRW*SRRRPP
Trigger: TGGTGGCCGTCTCCTGGACCACCAACGACGTGGTGC...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTATCTGCACCACGTCGTTaGTGGTCCAGGAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVSAPRR*WSRRRP
Trigger: TGGCCGTCTCCTGGACCACCAACGACGTGGTGCAGA...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTTTTGTAGGCAGCTGGTaGCTGGTAGGCAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVFVGSW*LVGRCG
Trigger: ACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAA...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCGCAAGGTTTATTCCTaGATCACAAACCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVRKVYS*ITNQPH
Trigger: GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCG...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACCGCAAGGTTTATTCCTaGATCACAAACCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHRKVYS*ITNQPH
Trigger: GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCG...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGCACTTCCCTGTGTCCTaGAACTGCCTGATTGTTGTA +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLHFPVS*NCLIVV
Trigger: TACAACAATCAGGCAGTTCCAGGACACAGGGAAGTG...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACGGCACACGTGCCACTTaGTTAGCTAGCATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYGTRAT*LASMRG
Trigger: TCCTCTCATGCTAGCTAACCAAGTGGCACGTGTGCC...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACACAGTGTTCCTTAGAATaGCCTGCGTGGGCACACGTG +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTQCSLE*PAWAHV
Trigger: CACGTGTGCCCACGCAGGCCATTCTAAGGAACACTG...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTGGCTTCAACAGTTCTTaGCTTCTTGGCTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPGFNSS*LLGLCP
Trigger: TGGACACAAGCCAAGAAGTCAAGAACTGTTGAAGCC...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR TCA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTAATCCTGGCAGAAGGTaGAGCAAACACATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSNPGRR*SKHILF
Trigger: AAAGAGGATGTGTTTGCTTCACCTTCTGCCAGGATT...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS-3UTR GCA 90 bp TGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAACTGGTAGATGCCTGTaGTGTGCCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: CPCALKTFPRIHIISLDTTGRCL*CATHTP
Trigger: TGGAGTGTGTGTGGCACAGCACAGGCATCTACCAGT...TGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAATCTGGCACTGGTAGATaGCTGTGCTGTGCCACACAC +
Preference number: 4 (lower is better)
Translates to: PCALKTFPRIHIISLDTKSGTGR*LCCATH
Trigger: GTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGA...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGCCTGTGTCCTGGAACTaGCTGATTGTTGTAGATTAC +
Preference number: 4 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLPVSWN*LIVVDY
Trigger: GTAATCTACAACAATCAGGCAGTTCCAGGACACAGG...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR GCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTTTCCTTAGAATGGCCTaGGTGGGCACACGTGCCACT +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVFLRMA*VGTRAT
Trigger: AGTGGCACGTGTGCCCACGCAGGCCATTCTAAGGAA...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCAGTTCTTGACTTCTTaGCTTGTGTCCAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVQFLTS*LVSRSL
Trigger: CAGAGATCTGGACACAAGCCAAGAAGTCAAGAACTG...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CCA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACCAGTTCTTGACTTCTTaGCTTGTGTCCAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: FINSHIRKVYSWITNQPHQFLTS*LVSRSL
Trigger: CAGAGATCTGGACACAAGCCAAGAAGTCAAGAACTG...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCGTCTTTGTAGGCAGCTaGTGGCTGGTAGGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTVFVGS*WLVGRC
Trigger: GCACCTGCCTACCAGCCACCAGCTGCCTACAAAGAC...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAGGGAGAAGCAGGCTGTaGGGACTCACACGTAGTCGT +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVGRSRL*GLTRSR
Trigger: ACGACTACGTGTGAGTCCCCACAGCCTGCTTCTCCC...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCAGTGTTCCTTAGAATaGCCTGCGTGGGCACACGTG +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTQCSLE*PAWAHV
Trigger: CACGTGTGCCCACGCAGGCCATTCTAAGGAACACTG...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAACCAGTTCCGCAGGACTaGGGAGGCCTCAGGAAACTT +
Preference number: 4 (lower is better)
Translates to: KDISSHSHYFLGYKNCPEPVPQD*GGLRKL
Trigger: AAGTTTCCTGAGGCCTCCCCAGTCCTGCGGAACTGG...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS-3UTR TCA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAACAAACCAACCCCACTaGCCAAACTCCCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVTNQPH*PNSQVT
Trigger: AGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGT...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR GCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTACTGGTAGATGCCTGTaGTGTGCCACACACACTCCA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCTGRCL*CATHTP
Trigger: TGGAGTGTGTGTGGCACAGCACAGGCATCTACCAGT...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTCGCAAGGTTTATTCCTaGATCACAAACCAACCCCAC +
Preference number: 4 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVRKVYS*ITNQPH
Trigger: GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCG...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CCA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGGCACACGTGCCACTTaGTTAGCTAGCATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCGTRAT*LASMRG
Trigger: TCCTCTCATGCTAGCTAACCAAGTGGCACGTGTGCC...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR TCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGGCTTCAACAGTTCTTaGCTTCTTGGCTTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: KDISSHSHYFLGYKNCPEGFNSS*LLGLCP
Trigger: TGGACACAAGCCAAGAAGTCAAGAACTGTTGAAGCC...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR GCA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGTGTCCTGGAACTaGCTGATTGTTGTAGATTAC +
Preference number: 4 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTPVSWN*LIVVDY
Trigger: GTAATCTACAACAATCAGGCAGTTCCAGGACACAGG...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CCA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGGAAACTTACAATCCTaGCAGAAGGTGAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: KDISSHSHYFLGYKNCPEGNLQS*QKVKQT
Trigger: TGTTTGCTTCACCTTCTGCCAGGATTGTAAGTTTCC...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS GCA 90 bp AGCCGGGCAGCTCCCTGGGCCCTCGGGGTCACGCCGCTCCTCAGGTaGCAGCCGGAGCCAGTTCCGCAGGACTGGGGAGGCCTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SRAAPWALGVTPLLR*QPEPVPQDWGGLRK
Trigger: TTTCCTGAGGCCTCCCCAGTCCTGCGGAACTGGCTCCGGCTGGCACCTGAGGAGCGGCGTGACCCCGAGGGCCCAGGGAGCTGCCCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS CCA 90 bp GTGGCTGGTAGGCAGGTGCGGTGTTTGCAGTGGTCGTGGTGGCCCTaGGCGGGGCCTGGTAGGGCCTGTAGGGTGCCTCGTCCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: VAGRQVRCLQWSWWP*AGPGRACRVPRPGR
Trigger: CCTGCCAGGACGAGGCACCCTACAGGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGACGGCCGTGAGGATGTaGGTGCCCACGTGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGTAVRM*VPTCAV
Trigger: GACAGCGCACGTGGGCACCAACATCCTCACGGCCGT...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGRQVRC*QWSWWP
Trigger: GGGCCACCACGACCACTGCAAACACCGCACCTGCCT...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 90 bp CAGCTGGTGGCTGGTAGGCAGGTGCGGTGTTTGCAGTGGTCGTGGTaGCCCTGGGCGGGGCCTGGTAGGGCCTGTAGGGTGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: QLVAGRQVRCLQWSW*PWAGPGRACRVPRP
Trigger: AGGACGAGGCACCCTACAGGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS GCA 90 bp GGGGGCCCGATTGTCTTTGTAGGCAGCTGGTGGCTGGTAGGCAGGTaGGGTGTTTGCAGTGGTCGTGGTGGCCCTGGGCGGGGCCTGGTA +
Preference number: 5 (lower is better)
Translates to: GGPIVFVGSWWLVGR*GVCSGRGGPGRGLV
Trigger: TACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAAGACAATCGGGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS GCA 90 bp ACGGCCGTGAGGATGTTGGTGCCCACGTGCGCTGTCCTCCGCCAGTaGGGCAGGATGGTGGTGATCAACGTGCCCACCATGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TAVRMLVPTCAVLRQ*GRMVVINVPTMPRK
Trigger: CTTCCTGGGCATGGTGGGCACGTTGATCACCACCATCCTGCCGCACTGGCGGAGGACAGCGCACGTGGGCACCAACATCCTCACGGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACGGCCGTGAGGATGTaGGTGCCCACGTGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPTAVRM*VPTCAV
Trigger: GACAGCGCACGTGGGCACCAACATCCTCACGGCCGT...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS TCA 90 bp GCCACACACACTCCATCCAGAGCCCTTTCAGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGTGCGCTGTCCTCCGCCAGTGCGGCA +
Preference number: 5 (lower is better)
Translates to: ATHTPSRALSGRTRP*GCWCPRALSSASAA
Trigger: TGCCGCACTGGCGGAGGACAGCGCACGTGGGCACCAACATCCTCACGGCCGTGTCCTACCTGAAAGGGCTCTGGATGGAGTGTGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS GCA 90 bp ATTGTCTTTGTAGGCAGCTGGTGGCTGGTAGGCAGGTGCGGTGTTTaGAGTGGTCGTGGTGGCCCTGGGCGGGGCCTGGTAGGGCCTGTA +
Preference number: 5 (lower is better)
Translates to: IVFVGSWWLVGRCGV*SGRGGPGRGLVGPV
Trigger: TACAGGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAAGACAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 90 bp CTGTGGGGACTCACACGTAGTCGTTCAGCCTGTACCCGCTGTGCGTaGCCGAGGTCACTGAGGGGGCCCGATTGTCTTTGTAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LWGLTRSRSACTRCA*PRSLRGPDCLCRQL
Trigger: CAGCTGCCTACAAAGACAATCGGGCCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCTGAACGACTACGTGTGAGTCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCTCGGCTCCGGGTCCATaGGCTGTTCACACTCACTTC +
Preference number: 5 (lower is better)
Translates to: NFVLEPLPPLTVPPGTQPSAPGP*AVHTHF
Trigger: GAAGTGAGTGTGAACAGCCAATGGACCCGGAGCCGA...GGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CAA 90 bp ACCCCTGCCTCCATTGACAGTCCCGCCGGGGACCCAGCCCACAGCAGCCCAGGGACAGTTCTTGACTTCTaGGCTTGTGTCCAGATCTCT +
Preference number: 5 (lower is better)
Translates to: TPASIDSPAGDPAHSSPGTVLDF*ACVQIS
Trigger: AGAGATCTGGACACAAGCCAAGAAGTCAAGAACTGT...CCCTGGGCTGCTGTGGGCTGGGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CAA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGTTCTGCACCACGTCGTaGGTGGTCCAGGAGACGGCC +
Preference number: 5 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGFCTTS*VVQETA
Trigger: GGCCGTCTCCTGGACCACCAACGACGTGGTGCAGAA...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGCCGGGGAAGAGGCCATATGGTTaGGCTGGGCTGGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: PEVNFVLEPLPPLTVPPGKRPYG*AGLGGL
Trigger: GAGACCACCCAGCCCAGCCAAACCATATGGCCTCTT...CCCCGGCGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CAA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPRQVRC*QWSWWP
Trigger: GGGCCACCACGACCACTGCAAACACCGCACCTGCCT...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 90 bp TCAGTAGGAGAGTGGAGACTGCGGCTTCAACAGTTCTTGACTTCTTaGCTTGTGTCCAGATCTCTGGGCCTTGCAGCCCCGTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SVGEWRLRLQQFLTS*LVSRSLGLAAPCCC
Trigger: ACAGCAGCACGGGGCTGCAAGGCCCAGAGATCTGGACACAAGCCAAGAAGTCAAGAACTGTTGAAGCCGCAGTCTCCACTCTCCTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR CAA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCCCAGATCTCTGGGCCTaGCAGCCCCGTGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASPDLWA*QPRAAV
Trigger: CACAGCAGCACGGGGCTGCAAGGCCCAGAGATCTGG...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR CAA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTTGGCGGGTGTGCCCTaGGCGCAGCGCGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: FINSHIRKVYSWITNQPHLAGVP*AQRVHF
Trigger: GAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAA...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCATGGCAAAGGTGGTCTaGGCGGGTGTGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: KQPHPQGLFLDHKPTPLTMAKVV*AGVPLA
Trigger: CGCCAAGGGCACACCCGCCAAGACCACCTTTGCCAT...GGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp ACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACTGACCAAATGGCAAAGGTGGTCTaGGCGGGTGTGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TATSARFIPGSQTNPTDQMAKVV*AGVPLA
Trigger: CGCCAAGGGCACACCCGCCAAGACCACCTTTGCCAT...TTGGTCAGTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASRQVRC*QWSWWP
Trigger: GGGCCACCACGACCACTGCAAACACCGCACCTGCCT...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCTCCTGTTCAGGTCCCTaGCCAGCCGGAGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASSCSGP*PAGAAL
Trigger: CAGAGCGGCTCCGGCTGGCAAGGGACCTGAACAGGA...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CAA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCTTCTGCACCACGTCGTaGGTGGTCCAGGAGACGGCC +
Preference number: 5 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASFCTTS*VVQETA
Trigger: GGCCGTCTCCTGGACCACCAACGACGTGGTGCAGAA...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: KNCPEVNFVLEPLPPLTVRQVRC*QWSWWP
Trigger: GGGCCACCACGACCACTGCAAACACCGCACCTGCCT...GACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCAGCCTGGCAGGGTaGCAGGGCGTCCATAGTCCA +
Preference number: 5 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSPSLAG*QGVHSP
Trigger: TGGACTATGGACGCCCTGCAACCCTGCCAGGCTGGG...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CAA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAATTGGCGGGTGTGCCCTaGGCGCAGCGCGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKLAGVP*AQRVHF
Trigger: GAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAA...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp GGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGATGGCAAAGGTGGTCTaGGCGGGTGTGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: GYKNCPEVNFVLEPLPPLMAKVV*AGVPLA
Trigger: CGCCAAGGGCACACCCGCCAAGACCACCTTTGCCAT...CAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAAGAACCCCTGCCTCCATaGACAGTCCCGCCGGGGACC +
Preference number: 5 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKEPLPP*TVPPGT
Trigger: GGTCCCCGGCGGGACTGTCAATGGAGGCAGGGGTTC...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp TTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTTCCTGTTCAGGTCCCTaGCCAGCCGGAGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: FLGYKNCPEVNFVLEPLPSCSGP*PAGAAL
Trigger: CAGAGCGGCTCCGGCTGGCAAGGGACCTGAACAGGA...AGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CAA 90 bp CCTGGATCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAAACGGCCGTGAGGATGTaGGTGCCCACGTGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: PGSQTNPTDQTPKSLYIKTAVRM*VPTCAV
Trigger: GACAGCGCACGTGGGCACCAACATCCTCACGGCCGT...TTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp TTCATAAACAGCCACATCCGCAAGGTTTATTCCTGGATCACAAACCAACCCCACATCTTACTCCCTCTCTaGGCAGGTGCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: FINSHIRKVYSWITNQPHILLPL*AGAWLV
Trigger: CACGAGCCAGGCACCTGCCAAGAGAGGGAGTAAGAT...GTGGGGTTGGTTTGTGATCCAGGAATAAACCTTGCGGATGTGGCTGTTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR CAA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCCTTCCGGAGCTCCTCTaGAACATCTTACTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPLPELL*NILLPL
Trigger: GAGAGGGAGTAAGATGTTCAAGAGGAGCTCCGGAAG...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS-3UTR CAA 90 bp TCACAAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTTTGGCGGGTGTGCCCTaGGCGCAGCGCGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: SQTNPTDQTPKSLYIKLVLAGVP*AQRVHF
Trigger: GAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAA...AACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTTCGGCTCCGGGTCCATaGGCTGTTCACACTCACTTC +
Preference number: 5 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSSAPGP*AVHTHF
Trigger: GAAGTGAGTGTGAACAGCCAATGGACCCGGAGCCGA...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS GCA 90 bp GCCATGGAAGAGCCTTTTAAAAACAAAGCTCTTGCTGGTCTCCAGTaGCCAAGAGTGGCCGCCAGTGGAAACAGACCTGGTGTTCTAAAT +
Preference number: 5 (lower is better)
Translates to: AMEEPFKNKALAGLQ*PRVAASGNRPGVLN
Trigger: ATTTAGAACACCAGGTCTGTTTCCACTGGCGGCCACTCTTGGGCACTGGAGACCAGCAAGAGCTTTGTTTTTAAAAGGCTCTTCCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR CAA 90 bp CTGTCCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACGCCACCACCTGGCGGTaGTCCTCACACTGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LSLCSKDISSHSHYFLGYATTWR*SSHCFG
Trigger: TCCAAAGCAGTGTGAGGACAACCGCCAGGTGGTGGC...GTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399135.6
CDS-3UTR CAA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCACGGCCGTGAGGATGTaGGTGCCCACGTGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTTAVRM*VPTCAV
Trigger: GACAGCGCACGTGGGCACCAACATCCTCACGGCCGT...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVRQVRC*QWSWWP
Trigger: GGGCCACCACGACCACTGCAAACACCGCACCTGCCT...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCGTTAAAAACAAAGCTCTaGCTGGTCTCCAGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: NCPEVNFVLEPLPPLTVPLKTKL*LVSSAQ
Trigger: TTGGGCACTGGAGACCAGCAAGAGCTTTGTTTTTAA...CGGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR CAA 90 bp CTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTACGGCCGTGAGGATGTaGGTGCCCACGTGCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LAFTLFPWIQKLPRSKLCTAVRM*VPTCAV
Trigger: GACAGCGCACGTGGGCACCAACATCCTCACGGCCGT...ACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AAACCAACCCCACTGACCAAACTCCCAAGTCACTTTATATTAAACTTGTTATCAATGGCAAAGGTGGTCTaGGCGGGTGTGCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: KPTPLTKLPSHFILNLLSMAKVV*AGVPLA
Trigger: CGCCAAGGGCACACCCGCCAAGACCACCTTTGCCAT...TGATAACAAGTTTAATATAAAGTGACTTGGGAGTTTGGTCAGTGGGGTTGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp GACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTATTCTGCACCACGTCGTaGGTGGTCCAGGAGACGGCC +
Preference number: 5 (lower is better)
Translates to: DISSHSHYFLGYKNCPEVFCTTS*VVQETA
Trigger: GGCCGTCTCCTGGACCACCAACGACGTGGTGCAGAA...TACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp ACATTATTTCCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCTTCTGCACCACGTCGTaGGTGGTCCAGGAGACGGCC +
Preference number: 5 (lower is better)
Translates to: TLFPWIQKLPRSKLCAGTFCTTS*VVQETA
Trigger: GGCCGTCTCCTGGACCACCAACGACGTGGTGCAGAA...GGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGGAAATAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 90 bp AAACAAAGCTCTTGCTGGTCTCCAGTGCCCAAGAGTGGCCGCCAGTaGAAACAGACCTGGTGTTCTAAATCTCAGTTTTTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KQSSCWSPVPKSGRQ*KQTWCSKSQFLFLS
Trigger: AGAAAGAAACAAAAACTGAGATTTAGAACACCAGGTCTGTTTCCACTGGCGGCCACTCTTGGGCACTGGAGACCAGCAAGAGCTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399137.5
CDS-3UTR CAA 90 bp CCCTGTGCTCTAAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAAAGAGGCCATATGGTTaGGCTGGGCTGGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: PCALKTFPRIHIISLDTKKRPYG*AGLGGL
Trigger: GAGACCACCCAGCCCAGCCAAACCATATGGCCTCTT...TTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTTAGAGCACAGGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CAA 90 bp AAAGACATTTCCTCGCATTCACATTATTTCCTTGGATACAAAAATTGCCCAGAATTCTGCACCACGTCGTaGGTGGTCCAGGAGACGGCC +
Preference number: 5 (lower is better)
Translates to: KDISSHSHYFLGYKNCPEFCTTS*VVQETA
Trigger: GGCCGTCTCCTGGACCACCAACGACGTGGTGCAGAA...TTCTGGGCAATTTTTGTATCCAAGGAAATAATGTGAATGCGAGGAAATGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS-3UTR CAA 90 bp AAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTCCCTCCAGGACGGAGTATTaGAGAGAAAATTGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: KLPRSKLCAGTPASIDSPSRTEY*RENCLD
Trigger: GTCTAGACAATTTTCTCTCAAATACTCCGTCCTGGA...GGGACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS-3UTR CAA 90 bp CAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCATTGACAGTACAGTTCTTGACTTCTaGGCTTGTGTCCAGATCTCT +
Preference number: 5 (lower is better)
Translates to: QKLPRSKLCAGTPASIDSTVLDF*ACVQIS
Trigger: AGAGATCTGGACACAAGCCAAGAAGTCAAGAACTGT...ACTGTCAATGGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342108.2
ENST00000399136.5
CDS-3UTR CAA 90 bp CCTTGGATACAAAAATTGCCCAGAAGTAAACTTTGTGCTGGAACCCCTGCCTCCTCCAGGACGGAGTATTaGAGAGAAAATTGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: PWIQKLPRSKLCAGTPASSRTEY*RENCLD
Trigger: GTCTAGACAATTTTCTCTCAAATACTCCGTCCTGGA...GGAGGCAGGGGTTCCAGCACAAAGTTTACTTCTGGGCAATTTTTGTATCCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS GCA 72 bp GCTCCCTGGGCCCTCGGGGTCACGCCGCTCCTCAGGTaGCAGCCGGAGCCAGTTCCGCAGGACTGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: APWALGVTPLLR*QPEPVPQDWGG
Trigger: GCCTCCCCAGTCCTGCGGAACTGGCTCCGGCTGGCACCTGAGGAGCGGCGTGACCCCGAGGGCCCAGGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS GCA 72 bp GGAAGCCCAGAAGCTGCACGGCCGTGCTGGCCATGGTaGGGCTGCCTGCCTAGGCCAGCCGGGCAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: GSPEAARPCWPW*GCLPRPAGQLP
Trigger: AGGGAGCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 72 bp GCAGGAAGCCCAGAAGCTGCACGGCCGTGCTGGCCATaGTGCGGCTGCCTGCCTAGGCCAGCCGGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: AGSPEAARPCWP*CGCLPRPAGQL
Trigger: GAGCTGCCCGGCTGGCCTAGGCAGGCAGCCGCACCATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 72 bp CAGCTGGTGGCTGGTAGGCAGGTGCGGTGTTTGCAGTaGTCGTGGTGGCCCTGGGCGGGGCCTGGTAGGGCC +
Preference number: 6 (lower is better)
Translates to: QLVAGRQVRCLQ*SWWPWAGPGRA
Trigger: GGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CAA 90 bp AGGGTGCCGCCGAGGATGGCAAAGGTGGTCTTGGCGGGTGTGCCCTaGGCGCAGCGCGTGCACTTCATCCCGATGACGGCGCAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: RVPPRMAKVVLAGVP*AQRVHFIPMTAQAQ
Trigger: CTGCGCCTGCGCCGTCATCGGGATGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS TCA 72 bp GTGTGCCCTTGGCGCAGCGCGTGCACTTCATCCCGATaGCGGCGCAGGCGCAGGCTATGCCCGAGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: VCPWRSACTSSR*RRRRRLCPRAG
Trigger: GCCTGCTCTCGGGCATAGCCTGCGCCTGCGCCGTCATCGGGATGAAGTGCACGCGCTGCGCCAAGGGCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 72 bp AGGCAGGTGCGGTGTTTGCAGTGGTCGTGGTGGCCCTaGGCGGGGCCTGGTAGGGCCTGTAGGGTGCCTCGT +
Preference number: 6 (lower is better)
Translates to: RQVRCLQWSWWP*AGPGRACRVPR
Trigger: ACGAGGCACCCTACAGGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS GCA 72 bp GTAGGCAGCTGGTGGCTGGTAGGCAGGTGCGGTGTTTaGAGTGGTCGTGGTGGCCCTGGGCGGGGCCTGGTA +
Preference number: 6 (lower is better)
Translates to: VGSWWLVGRCGV*SGRGGPGRGLV
Trigger: TACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTGCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS GCA 72 bp GCTCCCTGGGCCCTCGGGGTCACGCCGCTCCTCAGGTaGCAGCCGGAGCCATGCAGAAAACCTCGAGTCTCA +
Preference number: 6 (lower is better)
Translates to: APWALGVTPLLR*QPEPCRKPRVS
Trigger: TGAGACTCGAGGTTTTCTGCATGGCTCCGGCTGGCACCTGAGGAGCGGCGTGACCCCGAGGGCCCAGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399135.6
CDS CAA 72 bp TGTAGGCAGCTGGTGGCTGGTAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCCTGGGCGGGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: CRQLVAGRQVRC*QWSWWPWAGPG
Trigger: ACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTGCCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CAA 72 bp CCGAGGATGGCAAAGGTGGTCTTGGCGGGTGTGCCCTaGGCGCAGCGCGTGCACTTCATCCCGATGACGGCG +
Preference number: 6 (lower is better)
Translates to: PRMAKVVLAGVP*AQRVHFIPMTA
Trigger: CGCCGTCATCGGGATGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCATCCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CAA 72 bp ATGAAGAGGGTGCCGCCGAGGATGGCAAAGGTGGTCTaGGCGGGTGTGCCCTTGGCGCAGCGCGTGCACTTC +
Preference number: 6 (lower is better)
Translates to: MKRVPPRMAKVV*AGVPLAQRVHF
Trigger: GAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCACCTTTGCCATCCTCGGCGGCACCCTCTTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CAA 90 bp GATTGTCTTTGTAGGCAGCTGGTGGCTGGTAGGCAGGTGCGGTGTTaGCAGTGGTCGTGGTGGCCCTGGGCGGGGCCTGGTAGGGCCTGT +
Preference number: 6 (lower is better)
Translates to: DCLCRQLVAGRQVRC*QWSWWPWAGPGRAC
Trigger: ACAGGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCCTACCAGCCACCAGCTGCCTACAAAGACAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS TCA 72 bp ACTCCATCCAGAGCCCTTTCAGGTAGGACACGGCCGTaGGGATGTTGGTGCCCACGTGCGCTGTCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: TPSRALSGRTRP*GCWCPRALSSA
Trigger: GGCGGAGGACAGCGCACGTGGGCACCAACATCCTCACGGCCGTGTCCTACCTGAAAGGGCTCTGGATGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS GCA 72 bp AGGATGTTGGTGCCCACGTGCGCTGTCCTCCGCCAGTaGGGCAGGATGGTGGTGATCAACGTGCCCACCATG +
Preference number: 6 (lower is better)
Translates to: RMLVPTCAVLRQ*GRMVVINVPTM
Trigger: CATGGTGGGCACGTTGATCACCACCATCCTGCCGCACTGGCGGAGGACAGCGCACGTGGGCACCAACATCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 72 bp CTCACACGTAGTCGTTCAGCCTGTACCCGCTGTGCGTaGCCGAGGTCACTGAGGGGGCCCGATTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: LTRSRSACTRCA*PRSLRGPDCLC
Trigger: ACAAAGACAATCGGGCCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACAGGCTGAACGACTACGTGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000342108.2
ENST00000399135.6
ENST00000399136.5
ENST00000399137.5
ENST00000399139.5
CDS CCA 72 bp CTCCTCAGGTGCCAGCCGGAGCCAGTTCCGCAGGACTaGGGAGGCCTCAGGAAACTTACAATCCTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: LLRCQPEPVPQD*GGLRKLTILAE
Trigger: TTCTGCCAGGATTGTAAGTTTCCTGAGGCCTCCCCAGTCCTGCGGAACTGGCTCCGGCTGGCACCTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399139.5
CDS GCA 72 bp GCTCCTCTTGAACATCTTACTCCCTCTCTTGGCAGGTaGCTGGCTCGTGACTTCTGCCTGGCTGGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: APLEHLTPSLGR*LARDFCLAGLP
Trigger: AGGCAGCCCAGCCAGGCAGAAGTCACGAGCCAGGCACCTGCCAAGAGAGGGAGTAAGATGTTCAAGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS CCA 72 bp CTCTTGAACATCTTACTCCCTCTCTTGGCAGGTGCCTaGCTCGTGACTTCTGCCTGGCTGGGCTGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: LLNILLPLLAGA*LVTSAWLGCLP
Trigger: AGGCAGGCAGCCCAGCCAGGCAGAAGTCACGAGCCAGGCACCTGCCAAGAGAGGGAGTAAGATGTTCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS CAA 72 bp AGAAAACCTCGAGTCTCATCTTCCTGTTCAGGTCCCTaGCCAGCCGGAGCCGCTCTGGAGCCTGGCTGGACT +
Preference number: 6 (lower is better)
Translates to: RKPRVSSSCSGP*PAGAALEPGWT
Trigger: AGTCCAGCCAGGCTCCAGAGCGGCTCCGGCTGGCAAGGGACCTGAACAGGAAGATGAGACTCGAGGTTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5
CDS CCA 72 bp GAGTGGAGACTGCGGCTTCAACAGTTCTTGACTTCTTaGCTTGTGTCCAGATCTCTGGGCCTTGCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: EWRLRLQQFLTS*LVSRSLGLAAP
Trigger: CGGGGCTGCAAGGCCCAGAGATCTGGACACAAGCCAAGAAGTCAAGAACTGTTGAAGCCGCAGTCTCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342108.2
CDS CCA 72 bp GAGTGGAGACTGCGGCTTCAACAGTTCTTGACTTCTTaGCTTGTGTCCAGATCTCTGGGCCTTGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: EWRLRLQQFLTS*LVSRSLGLAAP
Trigger: GGGGGCTGCAAGGCCCAGAGATCTGGACACAAGCCAAGAAGTCAAGAACTGTTGAAGCCGCAGTCTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399136.5
CDS CAA 90 bp CTTCTGCCAACCAGACGCTTCCAGGACGGAGTATTTGAGAGAAAATaGTCTAGACAATTACAGTGTTCCTTAGAATGGCCTGCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: LLPTRRFQDGVFERK*SRQLQCSLEWPAWA
Trigger: TGCCCACGCAGGCCATTCTAAGGAACACTGTAATTGTCTAGACAATTTTCTCTCAAATACTCCGTCCTGGAAGCGTCTGGTTGGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399135.6
ENST00000399137.5