Pregenerated sensors for CLDN11 (Homo sapiens)
Ensembl gene IDs: ENSG00000013297Ensembl transcript IDs: ENST00000064724.8, ENST00000468358.5, ENST00000477531.3, ENST00000486429.1, ENST00000488989.1, ENST00000489485.5, ENST00000643053.1
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAAAATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTaGTATACCATCAGTGTTTACACCCGTAAAGCCAAATTCAACAGT | + |
|
Preference number: 1 (lower is better) Translates to: IKCTISIWRVWGLRY*YTISVYTRKAKFNS Trigger: ACTGTTGAATTTGGCTTTACGGGTGTAAACACTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCATTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR TCA 90 bp | ATTAACTGCATAATGCTGAGAACTTTGTTTCTGATTGCTGCCCATTaGTCGATGATTAAAGATGCCATAAAGTCACCCCACTTAAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: INCIMLRTLFLIAAH*SMIKDAIKSPHLRN Trigger: GTTTCTTAAGTGGGGTGACTTTATGGCATCTTTAATCATCGATCAATGGGCAGCAATCAGAAACAAAGTTCTCAGCATTATGCAGTTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCGGCTTCCCCACACTGTaGCGAGCAAACCTAGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TTKCQTGCFSRPLALEPGGFPTL*RANLGP Trigger: GGGCCCTAGGTTTGCTCGTCACAGTGTGGGGAAGCC...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCTTTGGCTTTAGAGCCTaGCAGAGGAATGGGCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPFGFRA*QRNGLP Trigger: GGGAAGCCCATTCCTCTGCCAGGCTCTAAAGCCAAA...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGAGCCTGGCAGAGGAATaGGCTTCCCCACACTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: EVCQNRLQCVFLDQARNLSLAEE*ASPHCD Trigger: GTCACAGTGTGGGGAAGCCCATTCCTCTGCCAGGCT...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGGCAAACCTAGGGCCCTaGGCCCAGCATCTACAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: NVWALSELEISFKATKRWANLGP*AQHLQH Trigger: GTGCTGTAGATGCTGGGCCCAGGGCCCTAGGTTTGC...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCATCCCATGTCCCCAATaGTATCTTTTTCTGTCTCGT | + |
|
Preference number: 2 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPIPCPQ*YLFLSR Trigger: ACGAGACAGAAAAAGATAGCATTGGGGACATGGGAT...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCAAAAGATGGGGGAAATaGGGAGAAGTTAAGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPKRWGK*GEVKTT Trigger: TGTAGTCTTAACTTCTCCCCATTTCCCCCATCTTTT...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCGTTAAGACTACAAAATaGCAGACAGGATGCTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPVKTTK*QTGCFS Trigger: AGAAAAGCATCCTGTCTGGCATTTTGTAGTCTTAAC...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGAACTTTGTTTCTGATTaGTGCCCATTGATCGATGAT | + |
|
Preference number: 2 (lower is better) Translates to: EVCQNRLQCVFLDQARNLNFVSD*CPLIDD Trigger: ATCATCGATCAATGGGCAGCAATCAGAAACAAAGTT...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR CAA 90 bp | TTATTGCACAGATTTCACTTCAAGAATAAAATGCACCATCAGTATTaGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGTGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LLHRFHFKNKMHHQY*ESLGSQILIYHQCL Trigger: TAAACACTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCATTTTATTCTTGAAGTGAAATCTGTGCAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR CCA 72 bp | CCCTGGCCCTCAACTTACAAAAGGGAAAGTTTCCCATaGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PWPSTYKRESFP*KVRSTIALPPP Trigger: TGGGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGTAAGTTGAGGGCCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCTGCTTTTCTAGACCTTaGGCTTTAGAGCCTGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPCFSRP*ALEPGR Trigger: TCTGCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCA...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGAGGCGGGAGGATACTTaGAGTCCAGGAGTTCGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EVCQNRLQCVFLDQARNLRREDT*SPGVRD Trigger: GTCTCGAACTCCTGGACTCAAAGTATCCTCCCGCCT...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGAGTTTGAAAAGCATCTaGGCCGGTGTGGTGGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VCQNRLQCVFLDQARNLMSLKSI*AGVVAH Trigger: GTGAGCCACCACACCGGCCAAGATGCTTTTCAAACT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGCACCATCAGTATTaGGAGAGTTTGGGGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: EVCQNRLQCVFLDQARNLMHHQY*ESLGSQ Trigger: CTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGGTCATCTGTATCAGTTaGAAAAGCATCTTGGCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: VCQNRLQCVFLDQARNLMVICIS*KSILAG Trigger: ACCGGCCAAGATGCTTTTCAAACTGATACAGATGAC...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGCAGTATTTGGAGAGTTaGGGGTCTCAGATACTGATA | + |
|
Preference number: 3 (lower is better) Translates to: VCQNRLQCVFLDQARNLMQYLES*GSQILI Trigger: TATCAGTATCTGAGACCCCAAACTCTCCAAATACTG...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR TCA 72 bp | ACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTaGTATACCATCAGTGTTTACACCCGTAAAGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TISIWRVWGLRY*YTISVYTRKAK Trigger: TTTGGCTTTACGGGTGTAAACACTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGCAACTCAATGTGTCTTaGTCCAAAATGTCCAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: EVCQNRLQCVFLDQARNLQLNVS*SKMSKQ Trigger: CTGTTTGGACATTTTGGACAAAGACACATTGAGTTG...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR TCA 72 bp | ATAATGCTGAGAACTTTGTTTCTGATTGCTGCCCATTaGTCGATGATTAAAGATGCCATAAAGTCACCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: IMLRTLFLIAAH*SMIKDAIKSPH Trigger: GTGGGGTGACTTTATGGCATCTTTAATCATCGATCAATGGGCAGCAATCAGAAACAAAGTTCTCAGCATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR TCA 72 bp | AATGACCTTGAAGGGAAGAAACAAAAGCCATCTTTATaGGGCTCCCATTGTCATCTGTATCAGTTTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NDLEGKKQKPSL*GSHCHLYQFEK Trigger: CTTTTCAAACTGATACAGATGACAATGGGAGCCTCATAAAGATGGCTTTTGTTTCTTCCCTTCAAGGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCGCGGGACACTGGAGGTaGAGGTGGGCGCCGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPAGHWR*RWAPEA Trigger: AGCCTCCGGCGCCCACCTCCACCTCCAGTGTCCCGC...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCCCCGAGGCGGGACACTaGAGGTGGAGGTGGGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TTKCQTGCFSRPLALEPGPEAGH*RWRWAP Trigger: CGGCGCCCACCTCCACCTCCAGTGTCCCGCCTCGGG...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCCAGCGCAGCAGAGGATaGCACAGCCACCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPQRSRG*HSHPRG Trigger: GCCTCGTGGGTGGCTGTGTCATCCTCTGCTGCGCTG...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCCCAGCTTGCGGCAGGTaGGGATGGTGTAGCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPPACGR*GWCSRR Trigger: CCTGCGGCTACACCATCCCCACCTGCCGCAAGCTGG...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCCGGCCCACAGCCCCTTaGAGCCCAGCTCATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPRPTAP*SPAHPA Trigger: AGCTGGATGAGCTGGGCTCCAAGGGGCTGTGGGCCG...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCAGCCCACGAAGCTCGTaGCGAAGCCCACCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPSPRSS*RSPPPA Trigger: TGCAGGTGGTGGGCTTCGTCACGAGCTTCGTGGGCT...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGACAGCCCCGTGGCCATaGCGCAGTCGGCCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMTAPWP*RSRPTA Trigger: GGCTGTGGGCCGACTGCGTCATGGCCACGGGGCTGT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCCCAGCTCATCCAGCTTaGGGCAGGTGGGGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPPAHPA*GRWGWC Trigger: ACACCATCCCCACCTGCCGCAAGCTGGATGAGCTGG...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCTGGGCACTCTTCGCATaGGTCGGGGAGCTAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTKCQTGCFSRPLALEPGWALFA*VGELEP Trigger: GGGCTCTAGCTCCCCGACTCATGCGAAGAGTGCCCA...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGGTGGGCGCCGGAGGCTaGGAGCTCAGCGGCGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVWALSELEISFKATKRWVGAGG*ELSGEG Trigger: CCCTTCGCCGCTGAGCTCGCAGCCTCCGGCGCCCAC...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGGCCAGGATGTCCCCGTaGCTCGCCCCTCACGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQARMSP*LAPHGC Trigger: ACAGCCGTGAGGGGCGAGGCACGGGGACATCCTGGC...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCCCTGGCCCATCCGGATaGAGGGAAGAACAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPPGPSG*REEQSA Trigger: TGCTGACTGTTCTTCCCTGCATCCGGATGGGCCAGG...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGGGCACGTGGCCACCATaGTGGCCGCCAGGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQGTWPP*WPPGCP Trigger: GGGACATCCTGGCGGCCACCATGGTGGCCACGTGCC...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGCCACCTGCAGGCACGTaGCCACCATGGTGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVCQNRLQCVFLDQARNLPPAGT*PPWWPP Trigger: TGGCGGCCACCATGGTGGCCACGTGCCTGCAGGTGG...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGGCCACACCGGGCTCCTaGCCCATCCGGATGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQATPGS*PIRMQG Trigger: TCCCTGCATCCGGATGGGCCAGGAGCCCGGTGTGGC...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGCGTAGCCCGGCAGGATaGGGATGTCCACCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMRSPAG*GCPPGA Trigger: AGCCCCTGGTGGACATCCTCATCCTGCCGGGCTACG...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGGCCTGGGCTGGACAGTaGCTGCCCAGGTACGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMAWAGQ*LPRYVS Trigger: GGAGACGTACCTGGGCAGGCACTGTCCAGCCCAGGC...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGACGTGGCCACCATGGTaGCCGCCAGGATGTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EVCQNRLQCVFLDQARNLTWPPW*PPGCPR Trigger: ACGGGGACATCCTGGCGGCCACCATGGTGGCCACGT...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCTTTTCACCAAAGGCCTaGGCATCTCCAGCGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPFSPKA*ASPAQQ Trigger: CTGCTGCGCTGGAGATGCCCAGGCCTTTGGTGAAAA...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGTGGAGGTGGTCACGATaGCCCCGATCCAGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQWRWSR*PRSSPR Trigger: TCGTGGGCTGGATCGGGGTCATCGTGACCACCTCCA...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGGGCTTCCCCACACTGTaGCGAGCAAACCTAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQGFPTL*RANLGP Trigger: GGGCCCTAGGTTTGCTCGTCACAGTGTGGGGAAGCC...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGACGAAGCCCACCACCTaGAGGCACGTGGCCACCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMTKPTT*RHVATM Trigger: CATGGTGGCCACGTGCCTGCAGGTGGTGGGCTTCGT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGTGTCCACCAGGGGCTTaGAGTGGTACAGCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVCQNRLQCVFLDQARNLCPPGA*SGTAPW Trigger: CCACGGGGCTGTACCACTGCAAGCCCCTGGTGGACA...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGACCAGGGGCTTGCAGTaGTACAGCCCCGTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMTRGLQ*YSPVAM Trigger: CATGGCCACGGGGCTGTACCACTGCAAGCCCCTGGT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCAAAACACCAGCCAGCTaGGCCCGCCTGTACTTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTKCQTGCFSRPLALEPGKTPAS*ARLYLA Trigger: GGCTAAGTACAGGCGGGCCCAGCTGGCTGGTGTTTT...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGTGCCTGGGCCTGGGCTaGACAGTGCCTGCCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NVWALSELEISFKATKRWCLGLG*TVPAQV Trigger: TACCTGGGCAGGCACTGTCCAGCCCAGGCCCAGGCA...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGAGCCAAAGCTCACGATaGTGGTCTCACGGTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQSQSSR*WSHGGR Trigger: GCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCT...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGGCAAACCTAGGGCCCTaGGCCCAGCATCTACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQANLGP*AQHLQH Trigger: GTGCTGTAGATGCTGGGCCCAGGGCCCTAGGTTTGC...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR CAA 72 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTaGGCTTTAGAGCCTGGCAGAGGAATGGGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTKCQTGCFSRP*ALEPGRGMGFP Trigger: GGGGAAGCCCATTCCTCTGCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGTCAGCAGCAGTAAAATaGCCGGCAGACCCAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: EVCQNRLQCVFLDQARNLSAAVK*PADPGP Trigger: CGGTCCTGGGTCTGCCGGCCATTTTACTGCTGCTGA...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGCAGGGAACCAGATGGTaGCAACAAGGGCGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVCQNRLQCVFLDQARNLQGTRW*QQGRRE Trigger: CTCTCTGCGCCCTTGTTGCCACCATCTGGTTCCCTG...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGCAAAGCTCACGATGGTaGTCTCACGGTGGGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMQSSRW*SHGGRT Trigger: TGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTG...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGAGCCTGGCAGAGGAATaGGCTTCCCCACACTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMSLAEE*ASPHCD Trigger: GTCACAGTGTGGGGAAGCCCATTCCTCTGCCAGGCT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGATGGTGGTCTCACGGTaGGCGCACACAGGGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVWALSELEISFKATKRWMVVSR*AHTGNQ Trigger: CTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCAT...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGAGAGAGCCAGCAGAATaGGCAAAACACCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQREPAE*AKHQPA Trigger: AGCTGGCTGGTGTTTTGCTCATTCTGCTGGCTCTCT...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGAGCACCAATCCAGCCTaGATACAGGGAGTAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQSTNPA*IQGVAK Trigger: TTTGGCTACTCCCTGTATGCAGGCTGGATTGGTGCT...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGACACAGGGAACCAGATaGTGGCAACAAGGGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVWALSELEISFKATKRWTQGTR*WQQGRR Trigger: TCTGCGCCCTTGTTGCCACCATCTGGTTCCCTGTGT...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCAAATATCCCTACCCCTaGCCCTCAACTTACAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTKCQTGCFSRPLALEPGKYPYP*PSTYKR Trigger: CCTTTTGTAAGTTGAGGGCCAGGGGTAGGGATATTT...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCTGGGGTCTCAGATACTaGTATACCATCAGTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TTKCQTGCFSRPLALEPGWGLRY*YTISVY Trigger: GTAAACACTGATGGTATATCAGTATCTGAGACCCCA...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCAGAATTACTTGTTCTTaGATCACTGATCAGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPRITCS*ITDQIP Trigger: GGGAATCTGATCAGTGATTCAAGAACAAGTAATTCT...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGTCATCTGTATCAGTTTaGAAAGCATCTTGGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMSSVSV*KASWPV Trigger: CACCGGCCAAGATGCTTTTCAAACTGATACAGATGA...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGAAACCTAGAGAGCACTaGGGTTATGCTTTCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: MHHQYLESLGSQILIYHQKPREH*GYAFMT Trigger: GGTCATGAAAGCATAACCTCAGTGCTCTCTAGGTTT...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCATTGAAGGCCAGTTTTaGAGACAGTCTGTTATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPIEGQF*RQSVIL Trigger: TAAAATAACAGACTGTCTGCAAAACTGGCCTTCAAT...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGAAAAGATGGGGGAAATaGGGAGAAGTTAAGACTACA | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMKRWGK*GEVKTT Trigger: TGTAGTCTTAACTTCTCCCCATTTCCCCCATCTTTT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGAGGGAAAGTTTCCCATaGAAAGTTCGTTCCACTATT | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMRESFP*KVRSTI Trigger: AATAGTGGAACGAACTTTCCATGGGAAACTTTCCCT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGTGCACCATCAGTATTTaGAGAGTTTGGGGTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVWALSELEISFKATKRWCTISI*RVWGLR Trigger: TCTGAGACCCCAAACTCTCCAAATACTGATGGTGCA...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR TCA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGGATACAACAGAAGATTaGAGGCCAGTTTTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NVWALSELEISFKATKRWDTTED*RPVLQT Trigger: TGTCTGCAAAACTGGCCTTCAATCTTCTGTTGTATC...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGAACTTTGTTTCTGATTaGTGCCCATTGATCGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMNFVSD*CPLIDD Trigger: ATCATCGATCAATGGGCAGCAATCAGAAACAAAGTT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGATGATGAAGGACATTAACTaGATAATGCTGAGAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCQNRLQCVFLDQARNLMMKDIN*IMLRTL Trigger: CAAAGTTCTCAGCATTATGCAGTTAATGTCCTTCAT...CATCAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| 3UTR CAA 72 bp | AGATTTCACTTCAAGAATAAAATGCACCATCAGTATTaGGAGAGTTTGGGGTCTCAGATACTGATATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFHFKNKMHHQY*ESLGSQILIYH Trigger: ATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCATTTTATTCTTGAAGTGAAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS CCA 90 bp | CTGGACAGTGCCTGCCCAGGTACGTCTCCCACGCTCGCGAGCCGCTaGAGGGCGACGGCCCGAGGCGGGACACTGGAGGTGGAGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDSACPGTSPTLASR*RATARGGTLEVEVG Trigger: GCCCACCTCCACCTCCAGTGTCCCGCCTCGGGCCGTCGCCCTCCAGCGGCTCGCGAGCGTGGGAGACGTACCTGGGCAGGCACTGTCCAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS GCA 90 bp | CATGGTGGCCGCCAGGATGTCCCCGTGCCTCGCCCCTCACGGCTGTaGCTGGGCCTGGGCTGGACAGTGCCTGCCCAGGTACGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGGRQDVPVPRPSRL*LGLGWTVPAQVRLP Trigger: TGGGAGACGTACCTGGGCAGGCACTGTCCAGCCCAGGCCCAGGCACAGCCGTGAGGGGCGAGGCACGGGGACATCCTGGCGGCCACCATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS GCA 90 bp | ATGACCCCGATCCAGCCCACGAAGCTCGTGACGAAGCCCACCACCTaGAGGCACGTGGCCACCATGGTGGCCGCCAGGATGTCCCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MTPIQPTKLVTKPTT*RHVATMVAARMSPC Trigger: GCACGGGGACATCCTGGCGGCCACCATGGTGGCCACGTGCCTGCAGGTGGTGGGCTTCGTCACGAGCTTCGTGGGCTGGATCGGGGTCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 90 bp | CGGCCCACAGCCCCTTGGAGCCCAGCTCATCCAGCTTGCGGCAGGTaGGGATGGTGTAGCCGCAGGTCACCACCCAGTCATTGGTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPTAPWSPAHPACGR*GWCSRRSPPSHWWR Trigger: CCTCCACCAATGACTGGGTGGTGACCTGCGGCTACACCATCCCCACCTGCCGCAAGCTGGATGAGCTGGGCTCCAAGGGGCTGTGGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 90 bp | ACAAGGGCGCAGAGAGCCAGCAGAATGAGCAAAACACCAGCCAGCTaGGCCCGCCTGTACTTAGCCACACCGGGCTCCTGGCCCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TRAQRASRMSKTPAS*ARLYLATPGSWPIR Trigger: CCGGATGGGCCAGGAGCCCGGTGTGGCTAAGTACAGGCGGGCCCAGCTGGCTGGTGTTTTGCTCATTCTGCTGGCTCTCTGCGCCCTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 90 bp | ACAGCCCCTTGGAGCCCAGCTCATCCAGCTTGCGGCAGGTGGGGATaGTGTAGCCGCAGGTCACCACCCAGTCATTGGTGGAGGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAPWSPAHPACGRWG*CSRRSPPSHWWRWS Trigger: TGACCACCTCCACCAATGACTGGGTGGTGACCTGCGGCTACACCATCCCCACCTGCCGCAAGCTGGATGAGCTGGGCTCCAAGGGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 90 bp | CCTGGCCCATCCGGATGCAGGGAAGAACAGTCAGCAGCAGTAAAATaGCCGGCAGACCCAGGACCGAGGCAGCAATCATCAGGGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPSGCREEQSAAVK*PADPGPRQQSSGRG Trigger: GCCGCGCCCTGATGATTGCTGCCTCGGTCCTGGGTCTGCCGGCCATTTTACTGCTGCTGACTGTTCTTCCCTGCATCCGGATGGGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000486429.1 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 90 bp | ACACCAGCCAGCTGGGCCCGCCTGTACTTAGCCACACCGGGCTCCTaGCCCATCCGGATGCAGGGAAGAACAGTCAGCAGCAGTAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TPASWARLYLATPGS*PIRMQGRTVSSSKM Trigger: CATTTTACTGCTGCTGACTGTTCTTCCCTGCATCCGGATGGGCCAGGAGCCCGGTGTGGCTAAGTACAGGCGGGCCCAGCTGGCTGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000486429.1 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 90 bp | CCACCGCACTCCAGCCTGCATACAGGGAGTAGCCAAAGCTCACGATaGTGGTCTCACGGTGGGCGCACACAGGGAACCAGATGGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPHSSLHTGSSQSSR*WSHGGRTQGTRWWQ Trigger: TTGCCACCATCTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGAGTGCGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468358.5 |
||
| CDS CCA 90 bp | GAGAAAGCTGTCTTACCCAGCAGAATGAGCAAAACACCAGCCAGCTaGGCCCGCCTGTACTTAGCCACACCGGGCTCCTGGCCCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EKAVLPSRMSKTPAS*ARLYLATPGSWPIR Trigger: CCGGATGGGCCAGGAGCCCGGTGTGGCTAAGTACAGGCGGGCCCAGCTGGCTGGTGTTTTGCTCATTCTGCTGGGTAAGACAGCTTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS CCA 90 bp | CCGCACTCCAGCCTGCATACAGGGAGTAGCCAAAGCTCACGATGGTaGTCTCACGGTGGGCGCACACAGGGAACCAGATGGTGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PHSSLHTGSSQSSRW*SHGGRTQGTRWWQQ Trigger: TTGTTGCCACCATCTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGAGTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468358.5 |
||
| CDS GCA 90 bp | GATGACACAGCCACCCACGAGGCACAGCACAGCACCAATCCAGCCTaGATACAGGGAGTAGCCAAAGCTCACGATGGTGGTCTCACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DDTATHEAQHSTNPA*IQGVAKAHDGGLTV Trigger: CACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGATTGGTGCTGTGCTGTGCCTCGTGGGTGGCTGTGTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000064724.8 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 90 bp | CAGCACCAATCCAGCCTGCATACAGGGAGTAGCCAAAGCTCACGATaGTGGTCTCACGGTGGGCGCACACAGGGAACCAGATGGTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QHQSSLHTGSSQSSR*WSHGGRTQGTRWWQ Trigger: TTGCCACCATCTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGATTGGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000064724.8 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 90 bp | CACCAATCCAGCCTGCATACAGGGAGTAGCCAAAGCTCACGATGGTaGTCTCACGGTGGGCGCACACAGGGAACCAGATGGTGGCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: HQSSLHTGSSQSSRW*SHGGRTQGTRWWQQ Trigger: TTGTTGCCACCATCTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGATTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000064724.8 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS TCA 90 bp | GGCAGGGAAGGAGATGTCCTCCAAGGATGCTTCCATAGCAAGCTGTaGGCCTTGAGGAGCCGCAGAAGAAAGCACCTCTGCCCTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GREGDVLQGCFHSKL*ALRSRRRKHLCPIC Trigger: GCAGATAGGGCAGAGGTGCTTTCTTCTGCGGCTCCTCAAGGCTCACAGCTTGCTATGGAAGCATCCTTGGAGGACATCTCCTTCCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||
| CDS GCA 90 bp | ATGCAGGTTCTGAAATCCATGGCACTGGCTGTCCACATGCTACAGTaGCAAGGCCATGTCCGGACACCAAAAGATAGGGACAGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: MQVLKSMALAVHMLQ*QGHVRTPKDRDRGL Trigger: CAGTCCTCTGTCCCTATCTTTTGGTGTCCGGACATGGCCTTGGCACTGTAGCATGTGGACAGCCAGTGCCATGGATTTCAGAACCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 90 bp | TCAGTCTCCATTAAGCTGCACATCTGGCTGTCACACACTCTTTTGTaGGGACATCTCAATGGTAGCACTGATGCCGCCTCTCTTCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSIKLHIWLSHTLL*GHLNGSTDAASLRG Trigger: GCCTCGAAGAGAGGCGGCATCAGTGCTACCATTGAGATGTCCCCACAAAAGAGTGTGTGACAGCCAGATGTGCAGCTTAATGGAGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS-3UTR CAA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGCCCAGCTCATCCAGCTaGCGGCAGGTGGGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EVCQNRLQCVFLDQARNLPSSSS*RQVGMV Trigger: CACCATCCCCACCTGCCGCAAGCTGGATGAGCTGGG...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CAA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCCTTGAGCCGGGGAGGTaGAGGCTACATGAGCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TTKCQTGCFSRPLALEPGLEPGR*RLHEPR Trigger: TCTCGGCTCATGTAGCCTCAACCTCCCCGGCTCAAG...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CAA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCAGGCGGGAGGATACTTaGAGTCCAGGAGTTCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTKCQTGCFSRPLALEPGRREDT*SPGVRD Trigger: GTCTCGAACTCCTGGACTCAAAGTATCCTCCCGCCT...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS GCA 90 bp | TGTGCCAATGTTCCACCCACAATCCTGGTTCAGTCTCCATTAAGCTaGACATCTGGCTGTCACACACTCTTTTGTGGGGACATCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CANVPPTILVQSPLS*TSGCHTLFCGDISM Trigger: CATTGAGATGTCCCCACAAAAGAGTGTGTGACAGCCAGATGTGCAGCTTAATGGAGACTGAACCAGGATTGTGGGTGGAACATTGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS CCA 90 bp | TGTTCCACCCACAATCCTGGTTCAGTCTCCATTAAGCTGCACATCTaGCTGTCACACACTCTTTTGTGGGGACATCTCAATGGTAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: CSTHNPGSVSIKLHI*LSHTLLWGHLNGST Trigger: AGTGCTACCATTGAGATGTCCCCACAAAAGAGTGTGTGACAGCCAGATGTGCAGCTTAATGGAGACTGAACCAGGATTGTGGGTGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS CCA 90 bp | CAAAGGGATACAGATTGTGGGAGTCCATCCCCCACTGGCTTCACTTaGCTTCCTTTCACATTTCTCTTGAACTTGAGAAGGCAGCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: QRDTDCGSPSPTGFT*LPFTFLLNLRRQQP Trigger: TGGTTGCTGCCTTCTCAAGTTCAAGAGAAATGTGAAAGGAAGCCAAGTGAAGCCAGTGGGGGATGGACTCCCACAATCTGTATCCCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS-3UTR CAA 90 bp | ATGCACCATCAGTATTTGGAGAGTTTGGGGTCTCAGATACTGATATACCATCAGGTCACCACCCAGTCATaGGTGGAGGTGGTCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: MHHQYLESLGSQILIYHQVTTQS*VEVVTM Trigger: CATCGTGACCACCTCCACCAATGACTGGGTGGTGAC...CTGATGGTATATCAGTATCTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAAGGGAAAGTTTCCCATGGAAAGTTCGTTCCACTATTGCCCTCCCTCCCCGTCATCTGTATCAGTTaGAAAAGCATCTTGGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKGKVSHGKFVPLLPSLPVICIS*KSILAG Trigger: ACCGGCCAAGATGCTTTTCAAACTGATACAGATGAC...GGGGAGGGAGGGCAATAGTGGAACGAACTTTCCATGGGAAACTTTCCCTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS TCA 90 bp | TGGGACCTGGGCATAGGTGTTCAAAAAGGATTCCACTGTGAAGACTaGGAAGGCTTCCATCTTTCAGGTCTTTCCCTTAGGTATTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: WDLGIGVQKGFHCED*EGFHLSGLSLRYFL Trigger: TAGGAAATACCTAAGGGAAAGACCTGAAAGATGGAAGCCTTCTCAGTCTTCACAGTGGAATCCTTTTTGAACACCTATGCCCAGGTCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS TCA 90 bp | CATGTCAATCTTTTAAGAGAAGGTGGAGATTGGATTAACCAACGTTaGTGGAAAGGGCAGGGAAGGAGATGTCCTCCAAGGATGCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVNLLREGGDWINQR*WKGQGRRCPPRMLP Trigger: TGGAAGCATCCTTGGAGGACATCTCCTTCCCTGCCCTTTCCATCAACGTTGGTTAATCCAATCTCCACCTTCTCTTAAAAGATTGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||
| CDS GCA 90 bp | AATATAGATTCCTCAAGAGCTGCTATTCAAGCCATAAGCAGCATGTaGCAATGTTCCACCCACAATCCTGGTTCAGTCTCCATTAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIDSSRAAIQAISSM*QCSTHNPGSVSIKL Trigger: CAGCTTAATGGAGACTGAACCAGGATTGTGGGTGGAACATTGGCACATGCTGCTTATGGCTTGAATAGCAGCTCTTGAGGAATCTATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS-3UTR CAA 90 bp | GAAGTCTGCCAAAATAGATTGCAATGTGTTTTCTTAGACCAGGCCCGTAACTTGTGCTTTTCTAGACCTTaGGCTTTAGAGCCTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EVCQNRLQCVFLDQARNLCFSRP*ALEPGR Trigger: TCTGCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCA...CAAGTTACGGGCCTGGTCTAAGAAAACACATTGCAATCTATTTTGGCAGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CAA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGAGTTTGAAAAGCATCTaGGCCGGTGTGGTGGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NVWALSELEISFKATKRWSLKSI*AGVVAH Trigger: GTGAGCCACCACACCGGCCAAGATGCTTTTCAAACT...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CAA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCCAACTCAATGTGTCTTaGTCCAAAATGTCCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: TTKCQTGCFSRPLALEPGQLNVS*SKMSKQ Trigger: CTGTTTGGACATTTTGGACAAAGACACATTGAGTTG...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS GCA 90 bp | TCTAAGATTCTGCATGAGGTAGAGAAATATAGATTCCTCAAGAGCTaGTATTCAAGCCATAAGCAGCATGTGCCAATGTTCCACCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SKILHEVEKYRFLKS*YSSHKQHVPMFHPQ Trigger: TTGTGGGTGGAACATTGGCACATGCTGCTTATGGCTTGAATAGCAGCTCTTGAGGAATCTATATTTCTCTACCTCATGCAGAATCTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS GCA 90 bp | CAAAGCAGCCCCTTTCATGTACTGAGATTAAGTTTAAGATGCGGATaGAATGTCCTTGGCTTCCTCACTCGTCATGTCAATCTTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSSPFHVLRLSLRCG*NVLGFLTRHVNLLR Trigger: TCTTAAAAGATTGACATGACGAGTGAGGAAGCCAAGGACATTGCATCCGCATCTTAAACTTAATCTCAGTACATGAAAGGGGCTGCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||
| CDS-3UTR CAA 90 bp | AATGTCTGGGCATTATCTGAGCTAGAGATTTCTTTTAAGGCAACCAAAAGATGGATGCACCATCAGTATTaGGAGAGTTTGGGGTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVWALSELEISFKATKRWMHHQY*ESLGSQ Trigger: CTGAGACCCCAAACTCTCCAAATACTGATGGTGCAT...CCATCTTTTGGTTGCCTTAAAAGAAATCTCTAGCTCAGATAATGCCCAGACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS-3UTR CAA 90 bp | ACTACAAAATGCCAGACAGGATGCTTTTCTAGACCTTTGGCTTTAGAGCCTGGCGTCTGCCAAAATAGATaGCAATGTGTTTTCTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TTKCQTGCFSRPLALEPGVCQNR*QCVFLD Trigger: GTCTAAGAAAACACATTGCAATCTATTTTGGCAGAC...GCCAGGCTCTAAAGCCAAAGGTCTAGAAAAGCATCCTGTCTGGCATTTTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000064724.8 |
||
| CDS GCA 72 bp | GGCGGGACACTGGAGGTGGAGGTGGGCGCCGGAGGCTaGGAGCTCAGCGGCGAAGGGCGCACGGCGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: GGTLEVEVGAGG*ELSGEGRTAGT Trigger: TGTCCCCGCCGTGCGCCCTTCGCCGCTGAGCTCGCAGCCTCCGGCGCCCACCTCCACCTCCAGTGTCCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS GCA 72 bp | CTCACGGCTGTGCCTGGGCCTGGGCTGGACAGTGCCTaGCCAGGTACGTCTCCCACGCTCGCGAGCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTAVPGPGLDSA*PGTSPTLASRW Trigger: CCAGCGGCTCGCGAGCGTGGGAGACGTACCTGGGCAGGCACTGTCCAGCCCAGGCCCAGGCACAGCCGTGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 72 bp | CGAAGCCCACCACCTGCAGGCACGTGGCCACCATGGTaGCCGCCAGGATGTCCCCGTGCCTCGCCCCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: RSPPPAGTWPPW*PPGCPRASPLT Trigger: CGTGAGGGGCGAGGCACGGGGACATCCTGGCGGCCACCATGGTGGCCACGTGCCTGCAGGTGGTGGGCTTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 72 bp | CCCGGCAGGATGAGGATGTCCACCAGGGGCTTGCAGTaGTACAGCCCCGTGGCCATGACGCAGTCGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGRMRMSTRGLQ*YSPVAMTQSAH Trigger: GTGGGCCGACTGCGTCATGGCCACGGGGCTGTACCACTGCAAGCCCCTGGTGGACATCCTCATCCTGCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS GCA 72 bp | ATCCAGCCCACGAAGCTCGTGACGAAGCCCACCACCTaGAGGCACGTGGCCACCATGGTGGCCGCCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: IQPTKLVTKPTT*RHVATMVAARM Trigger: CATCCTGGCGGCCACCATGGTGGCCACGTGCCTGCAGGTGGTGGGCTTCGTCACGAGCTTCGTGGGCTGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 72 bp | GCCCCTTGGAGCCCAGCTCATCCAGCTTGCGGCAGGTaGGGATGGTGTAGCCGCAGGTCACCACCCAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: APWSPAHPACGR*GWCSRRSPPSH Trigger: ATGACTGGGTGGTGACCTGCGGCTACACCATCCCCACCTGCCGCAAGCTGGATGAGCTGGGCTCCAAGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS CCA 72 bp | AGCTGGGCCCGCCTGTACTTAGCCACACCGGGCTCCTaGCCCATCCGGATGCAGGGAAGAACAGTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SWARLYLATPGS*PIRMQGRTVSS Trigger: GCTGCTGACTGTTCTTCCCTGCATCCGGATGGGCCAGGAGCCCGGTGTGGCTAAGTACAGGCGGGCCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000486429.1 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 72 bp | TGGAGCCCAGCTCATCCAGCTTGCGGCAGGTGGGGATaGTGTAGCCGCAGGTCACCACCCAGTCATTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WSPAHPACGRWG*CSRRSPPSHWW Trigger: CCACCAATGACTGGGTGGTGACCTGCGGCTACACCATCCCCACCTGCCGCAAGCTGGATGAGCTGGGCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000064724.8 ENST00000486429.1 |
||
| CDS TCA 72 bp | CACCAAAGGCCTGGGCATCTCCAGCGCAGCAGAGGATaGCACAGCCACCCACGAGGCACAGCACAGCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: HQRPGHLQRSRG*HSHPRGTAQHQ Trigger: TTGGTGCTGTGCTGTGCCTCGTGGGTGGCTGTGTCATCCTCTGCTGCGCTGGAGATGCCCAGGCCTTTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000064724.8 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS GCA 72 bp | GCCACCCACGAGGCACAGCACAGCACCAATCCAGCCTaGATACAGGGAGTAGCCAAAGCTCACGATGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ATHEAQHSTNPA*IQGVAKAHDGG Trigger: ACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGATTGGTGCTGTGCTGTGCCTCGTGGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000064724.8 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 72 bp | AGCCTGCATACAGGGAGTAGCCAAAGCTCACGATGGTaGTCTCACGGTGGGCGCACACAGGGAACCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SLHTGSSQSSRW*SHGGRTQGTRW Trigger: CCATCTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 72 bp | TCCAGCCTGCATACAGGGAGTAGCCAAAGCTCACGATaGTGGTCTCACGGTGGGCGCACACAGGGAACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLHTGSSQSSR*WSHGGRTQGTR Trigger: TCTGGTTCCCTGTGTGCGCCCACCGTGAGACCACCATCGTGAGCTTTGGCTACTCCCTGTATGCAGGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000489485.5 ENST00000643053.1 |
||
| CDS CCA 72 bp | TCCGGATGCAGGGAAGAACAGTCAGCAGCAGTAAAATaGCCGGCAGACCCAGGACCGAGGCAGCAATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SGCREEQSAAVK*PADPGPRQQSS Trigger: TGATGATTGCTGCCTCGGTCCTGGGTCTGCCGGCCATTTTACTGCTGCTGACTGTTCTTCCCTGCATCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000064724.8 ENST00000468358.5 ENST00000477531.3 ENST00000486429.1 ENST00000489485.5 ENST00000643053.1 |
||
| CDS TCA 72 bp | AGGGTACCACTGAGAAAGCTGTCTTACCCAGCAGAATaGGCAAAACACCAGCCAGCTGGGCCCGCCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: RVPLRKLSYPAE*AKHQPAGPACT Trigger: AGTACAGGCGGGCCCAGCTGGCTGGTGTTTTGCTCATTCTGCTGGGTAAGACAGCTTTCTCAGTGGTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS TCA 72 bp | TCCTCCAAGGATGCTTCCATAGCAAGCTGTGAGCCTTaGGGAGCCGCAGAAGAAAGCACCTCTGCCCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SSKDASIASCEP*GAAEESTSALS Trigger: AGATAGGGCAGAGGTGCTTTCTTCTGCGGCTCCTCAAGGCTCACAGCTTGCTATGGAAGCATCCTTGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||
| CDS CAA 90 bp | GGTTCAGTCTCCATTAAGCTGCACATCTGGCTGTCACACACTCTTTaGTGGGGACATCTCAATGGTAGCACTGATGCCGCCTCTCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GSVSIKLHIWLSHTL*WGHLNGSTDAASLR Trigger: TCGAAGAGAGGCGGCATCAGTGCTACCATTGAGATGTCCCCACAAAAGAGTGTGTGACAGCCAGATGTGCAGCTTAATGGAGACTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS GCA 72 bp | GTTCCACCCACAATCCTGGTTCAGTCTCCATTAAGCTaGACATCTGGCTGTCACACACTCTTTTGTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPPTILVQSPLS*TSGCHTLFCGD Trigger: GTCCCCACAAAAGAGTGTGTGACAGCCAGATGTGCAGCTTAATGGAGACTGAACCAGGATTGTGGGTGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS CAA 72 bp | TCCATTAAGCTGCACATCTGGCTGTCACACACTCTTTaGTGGGGACATCTCAATGGTAGCACTGATGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SIKLHIWLSHTL*WGHLNGSTDAA Trigger: GGCGGCATCAGTGCTACCATTGAGATGTCCCCACAAAAGAGTGTGTGACAGCCAGATGTGCAGCTTAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS GCA 72 bp | TCCTCAAGAGCTGCTATTCAAGCCATAAGCAGCATGTaGCAATGTTCCACCCACAATCCTGGTTCAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRAAIQAISSM*QCSTHNPGSVS Trigger: GGAGACTGAACCAGGATTGTGGGTGGAACATTGGCACATGCTGCTTATGGCTTGAATAGCAGCTCTTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477531.3 ENST00000643053.1 |
||
| CDS TCA 72 bp | GGACCTGGGCATAGGTGTTCAAAAAGGATTCCACTGTaGAGACTGAGAAGGCTTCCATCTTTCAGGTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPGHRCSKRIPL*RLRRLPSFRSF Trigger: GAAAGACCTGAAAGATGGAAGCCTTCTCAGTCTTCACAGTGGAATCCTTTTTGAACACCTATGCCCAGGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS TCA 72 bp | CTTTTAAGAGAAGGTGGAGATTGGATTAACCAACGTTaGTGGAAAGGGCAGGGAAGGAGATGTCCTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLREGGDWINQR*WKGQGRRCPPR Trigger: CCTTGGAGGACATCTCCTTCCCTGCCCTTTCCATCAACGTTGGTTAATCCAATCTCCACCTTCTCTTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||
| CDS CAA 72 bp | CCCACTGGCTTCACTTGGCTTCCTTTCACATTTCTCTaGAACTTGAGAAGGCAGCAACCACAAGATCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTGFTWLPFTFL*NLRRQQPQDLR Trigger: TCTCAGATCTTGTGGTTGCTGCCTTCTCAAGTTCAAGAGAAATGTGAAAGGAAGCCAAGTGAAGCCAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS TCA 72 bp | GGCATAGGTGTTCAAAAAGGATTCCACTGTGAAGACTaGGAAGGCTTCCATCTTTCAGGTCTTTCCCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GIGVQKGFHCED*EGFHLSGLSLR Trigger: CCTAAGGGAAAGACCTGAAAGATGGAAGCCTTCTCAGTCTTCACAGTGGAATCCTTTTTGAACACCTATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000486429.1 |
||
| CDS CAA 72 bp | ATTGGAAACAAAGTCCCGCGTTCCTCAATAAGGAGATaGTTAAGTGCCTTCACAGTTAACTCCCCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IGNKVPRSSIRR*LSAFTVNSPFH Trigger: GTGGAAGGGGGAGTTAACTGTGAAGGCACTTAACAATCTCCTTATTGAGGAACGCGGGACTTTGTTTCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||
| CDS CAA 90 bp | AATTCCTCCATTGGAAACAAAGTCCCGCGTTCCTCAATAAGGAGATaGTTAAGTGCCTTCACAGTTAACTCCCCCTTCCACAATCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: NSSIGNKVPRSSIRR*LSAFTVNSPFHNPL Trigger: TAGAGGATTGTGGAAGGGGGAGTTAACTGTGAAGGCACTTAACAATCTCCTTATTGAGGAACGCGGGACTTTGTTTCCAATGGAGGAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000488989.1 ENST00000643053.1 |
||