Pregenerated sensors for CLDN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163347Ensembl transcript IDs: ENST00000295522.4, ENST00000490800.1
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGTGAGGTGGGAAGATCAGGAATTACAAACCACCGCTTACAGATaGAGCAATAAGCTTACAGCAGCCAAATGCCTTGCTCAAACACAG | + |
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Preference number: 1 (lower is better) Translates to: TVRWEDQELQTTAYR*SNKLTAAKCLAQTQ Trigger: CTGTGTTTGAGCAAGGCATTTGGCTGCTGTAAGCTTATTGCTTCATCTGTAAGCGGTGGTTTGTAATTCCTGATCTTCCCACCTCACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR TCA 90 bp | AGCTCTGAGGGCATCACTGAACAGATAGCACCTTATGAGTTATTATaGTTCAAAAATCTCCCTTGCTGTTGGATTTACCAACACGTAGGC | + |
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Preference number: 1 (lower is better) Translates to: SSEGITEQIAPYELL*FKNLPCCWIYQHVG Trigger: GCCTACGTGTTGGTAAATCCAACAGCAAGGGAGATTTTTGAATCATAATAACTCATAAGGTGCTATCTGTTCAGTGATGCCCTCAGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CCA 90 bp | TTCAAAGCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTaGGAAGGTCAACAGGAATTTATCACTTTGGTCATGCAGAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: FKANKSAMGQSTGIV*EGQQEFITLVMQKD Trigger: ATCTTTCTGCATGACCAAAGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGCTTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR TCA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGCACGCATGAAGAATTaGAAGAATTCATCCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQARMKN*KNSSLV Trigger: TACCAAGGATGAATTCTTTCAATTCTTCATGCGTGC...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR TCA 90 bp | TACATCTGTTTAGCCACAGAAAGCATCGGGCCATACTCACTGCAGAAGATAAGAAGTGTCTCAGCCAGCTaGGCAAATAAAGACACTACA | + |
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Preference number: 2 (lower is better) Translates to: YICLATESIGPYSLQKIRSVSAS*ANKDTT Trigger: TGTAGTGTCTTTATTTGCTCAGCTGGCTGAGACACT...TCTTATCTTCTGCAGTGAGTATGGCCCGATGCTTTCTGTGGCTAAACAGATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCCCTGGGGGAACAGCATaGAGCTACTCAATTGGACAA | + |
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Preference number: 2 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIPGGTA*SYSIGQ Trigger: TTGTCCAATTGAGTAGCTGCATGCTGTTCCCCCAGG...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CCA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACTTGTGTTACAACACCTaGGGGAACAGCATGCAGCTA | + |
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Preference number: 2 (lower is better) Translates to: TQFYFTVSSLERLVKARNLCYNT*GNSMQL Trigger: TAGCTGCATGCTGTTCCCCCAGGTGTTGTAACACAA...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CAA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTaGTTTAGTGCACTCAATTTTACTTCACTGTCTCATCACTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RAILTAEDKTSSESY*FSALNFTSLSHHLR Trigger: TCTCAAGTGATGAGACAGTGAAGTAAAATTGAGTGCACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CCA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACCAAACAAGAGTGCTATaGGTCAGAGTACAGGGATTG | + |
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Preference number: 2 (lower is better) Translates to: DHTLLGRYKTHDNYTWENQTRVL*VRVQGL Trigger: CAATCCCTGTACTCTGACCCATAGCACTCTTGTTTG...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCCGGTTTGTTTCAACATaGTTTTCTCCTTTTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIRFVST*FSPFAS Trigger: AGAGGCAAAAGGAGAAAATCATGTTGAAACAAACCG...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR GCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCTTATCACTTTGGTCATaGAGAAAGATTTGCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: EQHAATQLDKYFQSKQECLSLWS*RKICLQ Trigger: TTGGAGGCAAATCTTTCTGCATGACCAAAGTGATAA...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CAA 90 bp | AGAGAATATTTGTCACCAGATTATCACTCCAGAAAGTCTAGCACTTaGTTCAGACAAACAGACCACACCTTATTAGGAAGATATAAAACG | + |
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Preference number: 2 (lower is better) Translates to: REYLSPDYHSRKSST*FRQTDHTLLGRYKT Trigger: CGTTTTATATCTTCCTAATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAATCTGGTGACAAATATTCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR TCA 90 bp | GTAACTGATATCCACATGGAATTACACTCACACATCATGAAGATCTATGTATGTGGTAGAAAGATTAAGTaGCTTGCTTACAGCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: VTDIHMELHSHIMKIYVCGRKIK*LAYSYR Trigger: TCTGTAGCTGTAAGCAAGTCACTTAATCTTTCTACC...ACATACATAGATCTTCATGATGTGTGAGTGTAATTCCATGTGGATATCAGTTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CCA 90 bp | GTAACTGATATCCACATGGAATTACACTCACACATCATGAAGATCTATGTATGTGCATTCTGTACAGACTaGAAAAGTAAGAGCAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: VTDIHMELHSHIMKIYVCAFCTD*KSKSSC Trigger: ACAACTGCTCTTACTTTTCCAGTCTGTACAGAATGC...ACATACATAGATCTTCATGATGTGTGAGTGTAATTCCATGTGGATATCAGTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR TCA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACGGAGATAGAGACCAATaGAACACAAAACAAATAAGG | + |
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Preference number: 2 (lower is better) Translates to: DHTLLGRYKTHDNYTWENGDRDQ*NTKQIR Trigger: CCTTATTTGTTTTGTGTTTCATTGGTCTCTATCTCC...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR GCA 90 bp | GTAACTGATATCCACATGGAATTACACTCACACATCATGAAGATCTATGTATGTTTCAAAAATCTCCCTTaGTGTTGGATTTACCAACAC | + |
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Preference number: 2 (lower is better) Translates to: VTDIHMELHSHIMKIYVCFKNLP*CWIYQH Trigger: GTGTTGGTAAATCCAACAGCAAGGGAGATTTTTGAA...ACATACATAGATCTTCATGATGTGTGAGTGTAATTCCATGTGGATATCAGTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCAGGAATTTATCACTTTaGTCATGCAGAAAGATTTGC | + |
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Preference number: 2 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIRNLSL*SCRKIC Trigger: GCAAATCTTTCTGCATGACCAAAGTGATAAATTCCT...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR GCA 72 bp | TACCATTTCCAAACTAACTATCCTAGCAGCGTCAGCTaGCAGCTAACAGCAAGAGCTCTGAGGGCATCACTG | + |
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Preference number: 3 (lower is better) Translates to: YHFQTNYPSSVS*QLTARALRASL Trigger: CAGTGATGCCCTCAGAGCTCTTGCTGTTAGCTGGCAGCTGACGCTGCTAGGATAGTTAGTTTGGAAATGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR TCA 72 bp | TTACAGCAGCCAAATGCCTTGCTCAAACACAGACGGTaGTTGATAGCACCAAGACTCAAATCCAGGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LQQPNALLKHRR*LIAPRLKSRSP Trigger: TGGAGACCTGGATTTGAGTCTTGGTGCTATCAATCACCGTCTGTGTTTGAGCAAGGCATTTGGCTGCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR GCA 72 bp | AGCACCAAGACTCAAATCCAGGTCTCCAGACACCAATaGCAACACCCTTTCCATTACATCATCTTGCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: STKTQIQVSRHQ*QHPFHYIILLK Trigger: CTTGAGCAAGATGATGTAATGGAAAGGGTGTTGGCATTGGTGTCTGGAGACCTGGATTTGAGTCTTGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CAA 90 bp | TACATCTGTTTAGCCACAGAAAGCATCGGGCCATACTCACTGCAGAAGATAAGATCACTGTCTCATCACTaGAGAGACTGGTTAAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: YICLATESIGPYSLQKIRSLSHH*RDWLRQ Trigger: TTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGA...TCTTATCTTCTGCAGTGAGTATGGCCCGATGCTTTCTGTGGCTAAACAGATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CCA 72 bp | AACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTaGGAAGGTCAACAGGAATTTATCACTTTGGTCATG | + |
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Preference number: 3 (lower is better) Translates to: NKSAMGQSTGIV*EGQQEFITLVM Trigger: CATGACCAAAGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CAA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCCACCCCTTCCCCCAGTaGAGTATGATTACTCAATGG | + |
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Preference number: 3 (lower is better) Translates to: EQHAATQLDKYFQSKQECHPFPQ*SMITQW Trigger: CCATTGAGTAATCATACTCAACTGGGGGAAGGGGTG...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CAA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCGTCAGAGTACAGGGATaGTGTGGGAAGGTCAACAGG | + |
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Preference number: 3 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIVRVQG*CGKVNR Trigger: CCTGTTGACCTTCCCACACAATCCCTGTACTCTGAC...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CAA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTAGAAAGTCTAGCACTTaGTTCAGACAAACAGACCAC | + |
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Preference number: 3 (lower is better) Translates to: RAILTAEDKTSSESYLFSRKSST*FRQTDH Trigger: GTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCT...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTGCTGTTGGATTTACCAACACGTAGGCTTTTATTTCTTCCCATTACATCTGCAGGAATTTATCACTTaGGTCATGCAGAAAGATTTG | + |
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Preference number: 3 (lower is better) Translates to: PCCWIYQHVGFYFFPLHLQEFIT*VMQKDL Trigger: CAAATCTTTCTGCATGACCAAAGTGATAAATTCCTG...CAGATGTAATGGGAAGAAATAAAAGCCTACGTGTTGGTAAATCCAACAGCAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR-3UTR CAA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACATTCAATCAATAAAGTaGTGTTACAACACCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: DHTLLGRYKTHDNYTWENIQSIK*CYNTWG Trigger: CCCCCAGGTGTTGTAACACAACTTTATTGATTGAAT...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CCA 72 bp | TTAAAAATTCAATCAATAAAGTTGTGTTACAACACCTaGGGGAACAGCATGCAGCTACTCAATTGGACAAAT | + |
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Preference number: 3 (lower is better) Translates to: LKIQSIKLCYNT*GNSMQLLNWTN Trigger: ATTTGTCCAATTGAGTAGCTGCATGCTGTTCCCCCAGGTGTTGTAACACAACTTTATTGATTGAATTTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGACTCCCGAAGGTGGCTaGGCCCCGCGGAGGAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQTPEGG*APRRKL Trigger: TAACTTCCTCCGCGGGGCCCAGCCACCTTCGGGAGT...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGCTCAGGGGTGGCAGGTaGAGAAGGCGGAGAGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQLRGGR*RRRRVC Trigger: GCAAACTCTCCGCCTTCTGCACCTGCCACCCCTGAG...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | CCTTGCTGTTGGATTTACCAACACGTAGGCTTTTATTTCTTCCCATTACATCTGCCGCTGGAGAAGCTCTaGGTCGGGGTTGGGGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PCCWIYQHVGFYFFPLHLPLEKL*VGVGVR Trigger: GCGGACCCCAACCCCGACCCAGAGCTTCTCCAGCGG...CAGATGTAATGGGAAGAAATAAAAGCCTACGTGTTGGTAAATCCAACAGCAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | AAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGAATTTCGGAGAGTTTGCAGGTaGGCAACCCGGACTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: KSAMGQSTGIVWEGQQEFRRVCR*ATRTPE Trigger: TTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCG...AAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACGGGGCAGGGCAGTGCTaGCGATGGCGCCGATCCATC | + |
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Preference number: 4 (lower is better) Translates to: TQFYFTVSSLERLVKARNGAGQC*RWRRSI Trigger: GATGGATCGGCGCCATCGTCAGCACTGCCCTGCCCC...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCGGGAGCCCTGCTCGCTaGGCCGCCGCTGGAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIGSPAR*AAAGEA Trigger: AGCTTCTCCAGCGGCGGCGCAGCGAGCAGGGCTCCC...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCTCGCTGCGCCGCCGCTaGAGAAGCTCTGGGTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PKMSIGLFPGVVEEYKKISLRRR*RSSGSG Trigger: CCCCGACCCAGAGCTTCTCCAGCGGCGGCGCAGCGA...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCCCGGACTCCCGAAGGTaGCTGGGCCCCGCGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIPDSRR*LGPAEE Trigger: TTCCTCCGCGGGGCCCAGCCACCTTCGGGAGTCCGG...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATGCGCTGGCTCAGGGGTaGCAGGTGCAGAAGGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYALAQG*QVQKAE Trigger: CTCCGCCTTCTGCACCTGCCACCCCTGAGCCAGCGC...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGCTTACAGCAGCCAAATaGCTTGCTCAAACACAGACG | + |
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Preference number: 4 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQLTAAK*LAQTQT Trigger: CGTCTGTGTTTGAGCAAGGCATTTGGCTGCTGTAAG...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | GCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTATATCGCACCCCCAATaGCAGCCATCCTCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AMGQSTGIVWEGQQEFITISHPQ*QPSSSS Trigger: AGAAGATGAGGATGGCTGTCATTGGGGGTGCGATAT...AGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATATGAAGCCCAACAGCTaGAGCCCCGCGTTGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYMKPNS*SPALAM Trigger: CATGGCCAACGCGGGGCTGCAGCTGTTGGGCTTCAT...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | AAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGAATTTCCTGGGGGAACAGCATaGAGCTACTCAATTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: KSAMGQSTGIVWEGQQEFPGGTA*SYSIGQ Trigger: TTGTCCAATTGAGTAGCTGCATGCTGTTCCCCCAGG...AAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACACAGCCCCTCGTACATaGCCTGGGCGGTCACGATGT | + |
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Preference number: 4 (lower is better) Translates to: TQFYFTVSSLERLVKARNTAPRT*PGRSRC Trigger: ACATCGTGACCGCCCAGGCCATGTACGAGGGGCTGT...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATACTAGAAGCTGCGGTTaGTCCCAGGCTCGGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYTRSCG*SQAREL Trigger: CAGTTCCCGAGCCTGGGAGCAACCGCAGCTTCTAGT...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | TACATCTGTTTAGCCACAGAAAGCATCGGGCCATACTCACTGCAGAAGATAAGAGGGTTGCTTGCAATGTaGTGCTCAGATTCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: YICLATESIGPYSLQKIRGLLAM*CSDSAR Trigger: CCTTGCTGAATCTGAGCAGCACATTGCAAGCAACCC...TCTTATCTTCTGCAGTGAGTATGGCCCGATGCTTTCTGTGGCTAAACAGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | CAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTTTGGTCATGCAGAAAGCGTAGTCTTTCCCGCTaGAAGGTGCAGGTTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: QGLCGKVNRNLSLWSCRKRSLSR*KVQVLD Trigger: ATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACG...CTTTCTGCATGACCAAAGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTCCAGTGAAGAGAGCCTaGCCAAATTCGTACCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: RAILTAEDKTSSESYLFSPVKRA*PNSYLA Trigger: TGCCAGGTACGAATTTGGTCAGGCTCTCTTCACTGG...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCCTGGATACTAGAAGCTaGGGTTGCTCCCAGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PKMSIGLFPGVVEEYKKILDTRS*GCSQAR Trigger: CCGAGCCTGGGAGCAACCGCAGCTTCTAGTATCCAG...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCCCTAGCAGCGTCAGCTaGCAGCTAACAGCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQHAATQLDKYFQSKQECPSSVS*QLTARA Trigger: AGCTCTTGCTGTTAGCTGGCAGCTGACGCTGCTAGG...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | GCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTAATCTCCCTTGCTGTTaGATTTACCAACACGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AMGQSTGIVWEGQQEFITNLPCC*IYQHVG Trigger: GCCTACGTGTTGGTAAATCCAACAGCAAGGGAGATT...AGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CACACTACCTCTTCTAACTGGTTAAGTATCATTATCTCAATTTGGCAGATAGAAAGAAGGCGGAGAGTTTaGAGGTGGGCAACCCGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HTTSSNWLSIIISIWQIERRRRV*RWATRT Trigger: AGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCT...TTCTATCTGCCAAATTGAGATAATGATACTTAACCAGTTAGAAGAGGTAGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTGCCATCCTCATCTTCTaGACCTCATCGTCTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAILTAEDKTSSESYLFSAILIF*TSSSSK Trigger: CTTGGAAGACGATGAGGTGCAGAAGATGAGGATGGC...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCTTTCCCGCTGGAAGGTaGAGGTTTTGGATAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EQHAATQLDKYFQSKQECFPAGR*RFWIGP Trigger: AGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAA...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCGGAAGGTGCAGGTTTTaGATAGGGCCTTGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQHAATQLDKYFQSKQECGRCRF*IGPWCW Trigger: CCAACACCAAGGCCCTATCCAAAACCTGCACCTTCC...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | TACATCTGTTTAGCCACAGAAAGCATCGGGCCATACTCACTGCAGAAGATAAGACAAACAAGAGTGCTATaGGTCAGAGTACAGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: YICLATESIGPYSLQKIRQTRVL*VRVQGL Trigger: CAATCCCTGTACTCTGACCCATAGCACTCTTGTTTG...TCTTATCTTCTGCAGTGAGTATGGCCCGATGCTTTCTGTGGCTAAACAGATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATAAGGCACGGGTTGCTTaGAATGTGCTGCTCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYKARVA*NVLLRF Trigger: GAATCTGAGCAGCACATTGCAAGCAACCCGTGCCTT...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATGGTGGCCACAAAGATTaGTATCACTCCCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYGGHKD*YHSQED Trigger: ATCCTCCTGGGAGTGATAGCAATCTTTGTGGCCACC...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTTTGGTCATGCAGAAAGCTTGAACGATTCTATTaGCATACCATGCTGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGLCGKVNRNLSLWSCRKLERFY*HTMLWQ Trigger: TTGCCACAGCATGGTATGGCAATAGAATCGTTCAAG...CTTTCTGCATGACCAAAGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | CCTTGCTGTTGGATTTACCAACACGTAGGCTTTTATTTCTTCCCATTACATCTGAGTGTCTCAGCCAGCTaGGCAAATAAAGACACTACA | + |
|
Preference number: 4 (lower is better) Translates to: PCCWIYQHVGFYFFPLHLSVSAS*ANKDTT Trigger: TGTAGTGTCTTTATTTGCTCAGCTGGCTGAGACACT...CAGATGTAATGGGAAGAAATAAAAGCCTACGTGTTGGTAAATCCAACAGCAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACCTCAAACACAGACGGTaGTTGATAGCACCAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: TQFYFTVSSLERLVKARNLKHRR*LIAPRL Trigger: GAGTCTTGGTGCTATCAATCACCGTCTGTGTTTGAG...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CACACTACCTCTTCTAACTGGTTAAGTATCATTATCTCAATTTGGCAGATAGAACATCAAGGCACGGGTTaGTTGCAATGTGCTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTTSSNWLSIIISIWQIEHQGTG*LQCAAQ Trigger: CTGAGCAGCACATTGCAAGCAACCCGTGCCTTGATG...TTCTATCTGCCAAATTGAGATAATGATACTTAACCAGTTAGAAGAGGTAGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTTTGGTCATGCAGAAAGATGATTTTCTCCTTTTaGCTCTGTGTCACACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLCGKVNRNLSLWSCRKMIFSF*LCVTRS Trigger: ACTACGTGTGACACAGAGGCAAAAGGAGAAAATCAT...CTTTCTGCATGACCAAAGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | GCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTTTATCACTTTGGTCATaGAGAAAGATTTGCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AMGQSTGIVWEGQQEFITLSLWS*RKICLQ Trigger: TTGGAGGCAAATCTTTCTGCATGACCAAAGTGATAA...AGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTCAAAGCAAACAAGAGTaGTATGGGTCAGAGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAILTAEDKTSSESYLFSQSKQE*YGSEYR Trigger: CCTGTACTCTGACCCATAGCACTCTTGTTTGCTTTG...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCGTACCTGGCATTGACTaGGGTCATAGGGTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQHAATQLDKYFQSKQECVPGID*GHRVIE Trigger: TTCTATGACCCTATGACCCCAGTCAATGCCAGGTAC...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCTTGTGTTACAACACCTaGGGGAACAGCATGCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EQHAATQLDKYFQSKQECLCYNT*GNSMQL Trigger: TAGCTGCATGCTGTTCCCCCAGGTGTTGTAACACAA...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | CAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTTTGGTCATGCAGAAAGTTCAAAAATCTCCCTTaGTGTTGGATTTACCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QGLCGKVNRNLSLWSCRKFKNLP*CWIYQH Trigger: GTGTTGGTAAATCCAACAGCAAGGGAGATTTTTGAA...CTTTCTGCATGACCAAAGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATCCCCAAAATGTCTATTaGTCTGTTTCCAGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYPQNVY*SVSRCG Trigger: ACCACACCTGGAAACAGACCAATAGACATTTTGGGG...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTGCACGCATGAAGAATTaGAAGAATTCATCCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAILTAEDKTSSESYLFSARMKN*KNSSLV Trigger: TACCAAGGATGAATTCTTTCAATTCTTCATGCGTGC...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCTTTTGGATAGGGCCTTaGTGTTGGGTAAGAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIFWIGP*CWVRGC Trigger: ACAACCTCTTACCCAACACCAAGGCCCTATCCAAAA...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATAGTACAGGGATTGTGTaGGAAGGTCAACAGGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYSTGIV*EGQQEF Trigger: AAATTCCTGTTGACCTTCCCACACAATCCCTGTACT...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATTGTATTCTATCTCACTaGATCCCCACAACATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYCILSH*IPTTSL Trigger: CAGTGATGTTGTGGGGATCCAGTGAGATAGAATACA...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACCATCACTTGAGAGACTaGTTAAGGCAAGAAACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQFYFTVSSLERLVKARNHHLRD*LRQETH Trigger: ATGGGTTTCTTGCCTTAACCAGTCTCTCAAGTGATG...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCGGTAGAAAGATTAAGTaGCTTGCTTACAGCTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQHAATQLDKYFQSKQECGRKIK*LAYSYR Trigger: TCTGTAGCTGTAAGCAAGTCACTTAATCTTTCTACC...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACATAGGGCCTTGGTGTTaGGTAAGAGGTTGTTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DHTLLGRYKTHDNYTWENIGPWC*VRGCFS Trigger: CGAAAAACAACCTCTTACCCAACACCAAGGCCCTAT...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACGCATTCTGTACAGACTaGAAAAGTAAGAGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TQFYFTVSSLERLVKARNAFCTD*KSKSSC Trigger: ACAACTGCTCTTACTTTTCCAGTCTGTACAGAATGC...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATGGAGATAGAGACCAATaGAACACAAAACAAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IITPESLALCSDKQTTPYGDRDQ*NTKQIR Trigger: CCTTATTTGTTTTGTGTTTCATTGGTCTCTATCTCC...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCTACACTCACACATCATaGAGATCTATGTATGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIYTHTS*RSMYVA Trigger: TGCCACATACATAGATCTTCATGATGTGTGAGTGTA...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CCA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTAGGAATTTATCACTTTaGTCATGCAGAAAGATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAILTAEDKTSSESYLFSRNLSL*SCRKIC Trigger: GCAAATCTTTCTGCATGACCAAAGTGATAAATTCCT...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CAA 72 bp | TTTAGTGCACTCAATTTTACTTCACTGTCTCATCACTaGAGAGACTGGTTAAGGCAAGAAACCCATTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FSALNFTSLSHH*RDWLRQETHFL Trigger: TAAGAAATGGGTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGTGCACTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | GTAACTGATATCCACATGGAATTACACTCACACATCATGAAGATCTATGTATGTCGGTTTGTTTCAACATaGTTTTCTCCTTTTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTDIHMELHSHIMKIYVCRFVST*FSPFAS Trigger: AGAGGCAAAAGGAGAAAATCATGTTGAAACAAACCG...ACATACATAGATCTTCATGATGTGTGAGTGTAATTCCATGTGGATATCAGTTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR TCA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACATCATCTTGCTCAAGTaGAATAGCATTCTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHTLLGRYKTHDNYTWENIILLK*NSILYR Trigger: TCTGTACAGAATGCTATTTCACTTGAGCAAGATGAT...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| 3UTR CAA 72 bp | CTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTaGTTTAGTGCACTCAATTTTACTTCACTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTAEDKTSSESY*FSALNFTSLSH Trigger: ATGAGACAGTGAAGTAAAATTGAGTGCACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR GCA 90 bp | GTAACTGATATCCACATGGAATTACACTCACACATCATGAAGATCTATGTATGTTCCATTACATCATCTTaGTCAAGTGAAATAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VTDIHMELHSHIMKIYVCSITSS*SSEIAF Trigger: GAATGCTATTTCACTTGAGCAAGATGATGTAATGGA...ACATACATAGATCTTCATGATGTGTGAGTGTAATTCCATGTGGATATCAGTTAC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS GCA 90 bp | CGCCCGCGCTGGCTCAGGGGTGGCAGGTGCAGAAGGCGGAGAGTTTaGAGGTGGGCAACCCGGACTCCCGAAGGTGGCTGGGCCCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRWLRGGRCRRRRV*RWATRTPEGGWAPR Trigger: CCGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTGCACCTGCCACCCCTGAGCCAGCGCGGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 90 bp | AGCCCTGCTCGCTGCGCCGCCGCTGGAGAAGCTCTGGGTCGGGGTTaGGGTCCGCGCCCGGGGCGGCGCTGGAGTCTGGATACTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPARCAAAGEALGRG*GPRPGRRWSLDTRS Trigger: GCTTCTAGTATCCAGACTCCAGCGCCGCCCCGGGCGCGGACCCCAACCCCGACCCAGAGCTTCTCCAGCGGCGGCGCAGCGAGCAGGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 90 bp | AGGCGGAGAGTTTGCAGGTGGGCAACCCGGACTCCCGAAGGTGGCTaGGCCCCGCGGAGGAAGTTAAGGCGGGGAGCCCTGCTCGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRRVCRWATRTPEGG*APRRKLRRGALLAA Trigger: CGCAGCGAGCAGGGCTCCCCGCCTTAACTTCCTCCGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 90 bp | CGCTGGCTCAGGGGTGGCAGGTGCAGAAGGCGGAGAGTTTGCAGGTaGGCAACCCGGACTCCCGAAGGTGGCTGGGCCCCGCGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RWLRGGRCRRRRVCR*ATRTPEGGWAPRRK Trigger: CTTCCTCCGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTGCACCTGCCACCCCTGAGCCAGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS GCA 90 bp | ATGGCGCCGATCCATCCCAGGAAGGCGAGAATGAAGCCCAACAGCTaGAGCCCCGCGTTGGCCATGACTCGCTCGGGCGCCCGCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MAPIHPRKARMKPNS*SPALAMTRSGARAG Trigger: GCCAGCGCGGGCGCCCGAGCGAGTCATGGCCAACGCGGGGCTGCAGCTGTTGGGCTTCATTCTCGCCTTCCTGGGATGGATCGGCGCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
||
| CDS CCA 90 bp | CAGAAGGCGGAGAGTTTGCAGGTGGGCAACCCGGACTCCCGAAGGTaGCTGGGCCCCGCGGAGGAAGTTAAGGCGGGGAGCCCTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QKAESLQVGNPDSRR*LGPAEEVKAGSPAR Trigger: GCGAGCAGGGCTCCCCGCCTTAACTTCCTCCGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | ATTATCACTCCAGAAAGTCTAGCACTTTGTTCAGACAAACAGACCACACCTTATAGCTGCAGCCCCGCGTaGGCCATGACTCGCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IITPESLALCSDKQTTPYSCSPA*AMTRSG Trigger: GCCCGAGCGAGTCATGGCCAACGCGGGGCTGCAGCT...ATAAGGTGTGGTCTGTTTGTCTGAACAAAGTGCTAGACTTTCTGGAGTGATAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
||
| CDS GCA 90 bp | TCTCCTTTTGCCTCTGTGTCACACGTAGTCTTTCCCGCTGGAAGGTaGAGGTTTTGGATAGGGCCTTGGTGTTGGGTAAGAGGTTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPFASVSHVVFPAGR*RFWIGPWCWVRGCF Trigger: AAAACAACCTCTTACCCAACACCAAGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACGTGTGACACAGAGGCAAAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
||
| CDS-3UTR CAA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGCACCCCTTCCCCCAGTaGAGTATGATTACTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQHPFPQ*SMITQW Trigger: CCATTGAGTAATCATACTCAACTGGGGGAAGGGGTG...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | TACATCTGTTTAGCCACAGAAAGCATCGGGCCATACTCACTGCAGAAGATAAGACGGTGGCCACAAAGATaGCTATCACTCCCAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: YICLATESIGPYSLQKIRRWPQR*LSLPGG Trigger: TCCTCCTGGGAGTGATAGCAATCTTTGTGGCCACCG...TCTTATCTTCTGCAGTGAGTATGGCCCGATGCTTTCTGTGGCTAAACAGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGTCACTGTCTCATCACTaGAGAGACTGGTTAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQSLSHH*RDWLRQ Trigger: TTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGA...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACCAGAAGGCGGAGAGTTaGCAGGTGGGCAACCCGGAC | + |
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Preference number: 5 (lower is better) Translates to: DHTLLGRYKTHDNYTWENQKAES*QVGNPD Trigger: GTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTG...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | CCTTGCTGTTGGATTTACCAACACGTAGGCTTTTATTTCTTCCCATTACATCTGTGGAAGGTGCAGGTTTaGGATAGGGCCTTGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PCCWIYQHVGFYFFPLHLWKVQV*DRALVL Trigger: CAACACCAAGGCCCTATCCAAAACCTGCACCTTCCA...CAGATGTAATGGGAAGAAATAAAAGCCTACGTGTTGGTAAATCCAACAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | ACTCAATTTTACTTCACTGTCTCATCACTTGAGAGACTGGTTAAGGCAAGAAACCAAGGCACGGGTTGCTaGCAATGTGCTGCTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: TQFYFTVSSLERLVKARNQGTGC*QCAAQI Trigger: AATCTGAGCAGCACATTGCAAGCAACCCGTGCCTTG...GTTTCTTGCCTTAACCAGTCTCTCAAGTGATGAGACAGTGAAGTAAAATTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GCAAACAAGAGTGCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGCAGGAATTTATCACTTaGGTCATGCAGAAAGATTTG | + |
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Preference number: 5 (lower is better) Translates to: ANKSAMGQSTGIVWEGQQQEFIT*VMQKDL Trigger: CAAATCTTTCTGCATGACCAAAGTGATAAATTCCTG...CTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGCACTCTTGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCGTCAGAGTACAGGGATaGTGTGGGAAGGTCAACAGG | + |
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Preference number: 5 (lower is better) Translates to: EQHAATQLDKYFQSKQECVRVQG*CGKVNR Trigger: CCTGTTGACCTTCCCACACAATCCCTGTACTCTGAC...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | TACATCTGTTTAGCCACAGAAAGCATCGGGCCATACTCACTGCAGAAGATAAGAAAATCTCCCTTGCTGTaGGATTTACCAACACGTAGG | + |
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Preference number: 5 (lower is better) Translates to: YICLATESIGPYSLQKIRKSPLL*DLPTRR Trigger: CCTACGTGTTGGTAAATCCAACAGCAAGGGAGATTT...TCTTATCTTCTGCAGTGAGTATGGCCCGATGCTTTCTGTGGCTAAACAGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 90 bp | GAAGAAGACCAAGTATATGTCACTGTTGTATGGAAGAGAGAAAACTaGACTAGGAATCTAGAGACCCCAGTCATACTGATGTTTCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: EEDQVYVTVVWKREN*TRNLETPVILMFPL Trigger: CAGCGGAAACATCAGTATGACTGGGGTCTCTAGATTCCTAGTCCAGTTTTCTCTCTTCCATACAACAGTGACATATACTTGGTCTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000490800.1 |
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| CDS-3UTR CAA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACCCATCAAGGCACGGGTaGCTTGCAATGTGCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: DHTLLGRYKTHDNYTWENPSRHG*LAMCCS Trigger: TGAGCAGCACATTGCAAGCAACCCGTGCCTTGATGG...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCAATTCGTACCTGGCATaGACTGGGGTCATAGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: EQHAATQLDKYFQSKQECNSYLA*TGVIGS Trigger: TGACCCTATGACCCCAGTCAATGCCAGGTACGAATT...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | CGGGCCATACTCACTGCAGAAGATAAGACTTCCTCAGAATCTTATTTGTTTAGTGATAGGGCCTTGGTGTaGGGTAAGAGGTTGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RAILTAEDKTSSESYLFSDRALV*GKRLFF Trigger: GAAAAACAACCTCTTACCCAACACCAAGGCCCTATC...ACTAAACAAATAAGATTCTGAGGAAGTCTTATCTTCTGCAGTGAGTATGGCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GCTATGGGTCAGAGTACAGGGATTGTGTGGGAAGGTCAACAGGAATTTATCACTATTCAATCAATAAAGTaGTGTTACAACACCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: AMGQSTGIVWEGQQEFITIQSIK*CYNTWG Trigger: CCCCCAGGTGTTGTAACACAACTTTATTGATTGAAT...AGTGATAAATTCCTGTTGACCTTCCCACACAATCCCTGTACTCTGACCCATAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GACCACACCTTATTAGGAAGATATAAAACGCATGATAATTACACTTGGGAAAACAAGGAGTCAAAGACTTaGCACTGGATCTGCCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: DHTLLGRYKTHDNYTWENKESKT*HWICPV Trigger: CACCGGGCAGATCCAGTGCAAAGTCTTTGACTCCTT...GTTTTCCCAAGTGTAATTATCATGCGTTTTATATCTTCCTAATAAGGTGTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GTAACTGATATCCACATGGAATTACACTCACACATCATGAAGATCTATGTATGTGTTTTGGATAGGGCCTaGGTGTTGGGTAAGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: VTDIHMELHSHIMKIYVCVLDRA*VLGKRL Trigger: CAACCTCTTACCCAACACCAAGGCCCTATCCAAAAC...ACATACATAGATCTTCATGATGTGTGAGTGTAATTCCATGTGGATATCAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | GAACAGCATGCAGCTACTCAATTGGACAAATATTTTCAAAGCAAACAAGAGTGCATTCAAAAATCTCCCTaGCTGTTGGATTTACCAACA | + |
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Preference number: 5 (lower is better) Translates to: EQHAATQLDKYFQSKQECIQKSP*LLDLPT Trigger: TGTTGGTAAATCCAACAGCAAGGGAGATTTTTGAAT...GCACTCTTGTTTGCTTTGAAAATATTTGTCCAATTGAGTAGCTGCATGCTGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS-3UTR CAA 90 bp | CCCAAAATGTCTATTGGTCTGTTTCCAGGTGTGGTAGAAGAATATAAAAAGATCAGGGTCATAGAATTCTaGAACGATTCTATTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: PKMSIGLFPGVVEEYKKIRVIEF*NDSIAI Trigger: TATGGCAATAGAATCGTTCAAGAATTCTATGACCCT...GATCTTTTTATATTCTTCTACCACACCTGGAAACAGACCAATAGACATTTTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | CGCTGCGCCGCCGCTGGAGAAGCTCTGGGTCGGGGTTaGGGTCCGCGCCCGGGGCGGCGCTGGAGTCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: RCAAAGEALGRG*GPRPGRRWSLD Trigger: ATCCAGACTCCAGCGCCGCCCCGGGCGCGGACCCCAACCCCGACCCAGAGCTTCTCCAGCGGCGGCGCAGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CAA 90 bp | GCGCCCGCGCTGGCTCAGGGGTGGCAGGTGCAGAAGGCGGAGAGTTaGCAGGTGGGCAACCCGGACTCCCGAAGGTGGCTGGGCCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: APALAQGWQVQKAES*QVGNPDSRRWLGPA Trigger: CGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTGCACCTGCCACCCCTGAGCCAGCGCGGGCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS GCA 72 bp | CCCGCGGAGGAAGTTAAGGCGGGGAGCCCTGCTCGCTaGGCCGCCGCTGGAGAAGCTCTGGGTCGGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PAEEVKAGSPAR*AAAGEALGRGW Trigger: CCAACCCCGACCCAGAGCTTCTCCAGCGGCGGCGCAGCGAGCAGGGCTCCCCGCCTTAACTTCCTCCGCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | CCCCGCGTTGGCCATGACTCGCTCGGGCGCCCGCGCTaGCTCAGGGGTGGCAGGTGCAGAAGGCGGAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PRVGHDSLGRPR*LRGGRCRRRRV Trigger: AACTCTCCGCCTTCTGCACCTGCCACCCCTGAGCCAGCGCGGGCGCCCGAGCGAGTCATGGCCAACGCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | GTTTGCAGGTGGGCAACCCGGACTCCCGAAGGTGGCTaGGCCCCGCGGAGGAAGTTAAGGCGGGGAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: VCRWATRTPEGG*APRRKLRRGAL Trigger: CAGGGCTCCCCGCCTTAACTTCCTCCGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | AGGGGTGGCAGGTGCAGAAGGCGGAGAGTTTGCAGGTaGGCAACCCGGACTCCCGAAGGTGGCTGGGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: RGGRCRRRRVCR*ATRTPEGGWAP Trigger: CGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTGCACCTGCCACCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | GAGAGTTTGCAGGTGGGCAACCCGGACTCCCGAAGGTaGCTGGGCCCCGCGGAGGAAGTTAAGGCGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ESLQVGNPDSRR*LGPAEEVKAGS Trigger: GCTCCCCGCCTTAACTTCCTCCGCGGGGCCCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS GCA 72 bp | TGGCTCAGGGGTGGCAGGTGCAGAAGGCGGAGAGTTTaGAGGTGGGCAACCCGGACTCCCGAAGGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: WLRGGRCRRRRV*RWATRTPEGGW Trigger: CCAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTGCACCTGCCACCCCTGAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CAA 72 bp | CTGGCTCAGGGGTGGCAGGTGCAGAAGGCGGAGAGTTaGCAGGTGGGCAACCCGGACTCCCGAAGGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LAQGWQVQKAES*QVGNPDSRRWL Trigger: CAGCCACCTTCGGGAGTCCGGGTTGCCCACCTGCAAACTCTCCGCCTTCTGCACCTGCCACCCCTGAGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS GCA 72 bp | ATCCATCCCAGGAAGGCGAGAATGAAGCCCAACAGCTaGAGCCCCGCGTTGGCCATGACTCGCTCGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: IHPRKARMKPNS*SPALAMTRSGA Trigger: GGCGCCCGAGCGAGTCATGGCCAACGCGGGGCTGCAGCTGTTGGGCTTCATTCTCGCCTTCCTGGGATGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS GCA 72 bp | CGGTGGCCACAAAGATTGCTATCACTCCCAGGAGGATaGCAACCACCATCAAGGCACGGGTTGCTTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: RWPQRLLSLPGG*QPPSRHGLLAM Trigger: CATTGCAAGCAACCCGTGCCTTGATGGTGGTTGGCATCCTCCTGGGAGTGATAGCAATCTTTGTGGCCACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295522.4 ENST00000490800.1 |
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| CDS GCA 72 bp | GCCTCTGTGTCACACGTAGTCTTTCCCGCTGGAAGGTaGAGGTTTTGGATAGGGCCTTGGTGTTGGGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: ASVSHVVFPAGR*RFWIGPWCWVR Trigger: TCTTACCCAACACCAAGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACGTGTGACACAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CAA 90 bp | TGCCTCTGTGTCACACGTAGTCTTTCCCGCTGGAAGGTGCAGGTTTaGGATAGGGCCTTGGTGTTGGGTAAGAGGTTGTTTTTCGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CLCVTRSLSRWKVQV*DRALVLGKRLFFGD Trigger: GTCCCCGAAAAACAACCTCTTACCCAACACCAAGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACGTGTGACACAGAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | TCCTTTTGCCTCTGTGTCACACGTAGTCTTTCCCGCTaGAAGGTGCAGGTTTTGGATAGGGCCTTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SFCLCVTRSLSR*KVQVLDRALVL Trigger: CAACACCAAGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACGTGTGACACAGAGGCAAAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CAA 72 bp | GTCACACGTAGTCTTTCCCGCTGGAAGGTGCAGGTTTaGGATAGGGCCTTGGTGTTGGGTAAGAGGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: VTRSLSRWKVQV*DRALVLGKRLF Trigger: AAACAACCTCTTACCCAACACCAAGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACGTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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| CDS CCA 72 bp | TCACACGTAGTCTTTCCCGCTGGAAGGTGCAGGTTTTaGATAGGGCCTTGGTGTTGGGTAAGAGGTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SHVVFPAGRCRF*IGPWCWVRGCF Trigger: AAAACAACCTCTTACCCAACACCAAGGCCCTATCCAAAACCTGCACCTTCCAGCGGGAAAGACTACGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295522.4 |
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