Pregenerated sensors for CLCNKB (Homo sapiens)
Ensembl gene IDs: ENSG00000184908Ensembl transcript IDs: ENST00000682338.1, ENST00000682793.1, ENST00000682838.1, ENST00000683578.1, ENST00000683661.1, ENST00000684324.1, ENST00000684545.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCACTCTGCCCCAGGGCATGGAGGAGGGAAGGAGAAGAAACAGGGTaGCTGGAAGAGGAGGCAGAGAGCTCAGAGGAGGAAGAGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PLCPRAWRREGEETG*LEEEAESSEEEELL Trigger: CAAGAGCTCTTCCTCCTCTGAGCTCTCTGCCTCCTCTTCCAGCCACCCTGTTTCTTCTCCTTCCCTCCTCCATGCCCTGGGGCAGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683661.1 |
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| CDS CCA 90 bp | TCTGCCCCAGGGCATGGAGGAGGGAAGGAGAAGAAACAGGGTGGCTaGAAGAGGAGGCAGAGAGCTCAGAGGAGGAAGAGCTCTTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: SAPGHGGGKEKKQGG*KRRQRAQRRKSSWE Trigger: TTCCCAAGAGCTCTTCCTCCTCTGAGCTCTCTGCCTCCTCTTCCAGCCACCCTGTTTCTTCTCCTTCCCTCCTCCATGCCCTGGGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683661.1 |
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| CDS TCA 90 bp | GGAGCAGAGGAACGCTGGAGGGAAACAGTGGTCATGACAAGGATCTaGAAAGACAGGAGATGCGGAGCCAGGCACAGTGCCTGTAATCCC | + |
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Preference number: 5 (lower is better) Translates to: GAEERWRETVVMTRI*KDRRCGARHSACNP Trigger: GGGATTACAGGCACTGTGCCTGGCTCCGCATCTCCTGTCTTTTCAGATCCTTGTCATGACCACTGTTTCCCTCCAGCGTTCCTCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682793.1 ENST00000682838.1 |
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| CDS GCA 90 bp | CATAGCTTACAGCAGCCTCAGTTGCCAGGGCTCAAGTTATCCTCCTaGGTCAGCCTCCTGAATAGCTGGGACTCCAGAGGAGGGTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: HSLQQPQLPGLKLSS*VSLLNSWDSRGGCD Trigger: ATCACACCCTCCTCTGGAGTCCCAGCTATTCAGGAGGCTGACGCAGGAGGATAACTTGAGCCCTGGCAACTGAGGCTGCTGTAAGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000682838.1 |
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| CDS GCA 90 bp | CATCAGGCCCCTTCTCTCCAGTGGCACACCCCTCCTGCTAAGCACTaGACTCAGCTCTTCTCAGCCTCCGTTATGTTATTTAGTCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: HQAPSLQWHTPPAKH*TQLFSASVMLFSPH Trigger: GTGAGGACTAAATAACATAACGGAGGCTGAGAAGAGCTGAGTGCAGTGCTTAGCAGGAGGGGTGTGCCACTGGAGAGAAGGGGCCTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000684545.1 |
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| CDS GCA 72 bp | GAGGCCGAGGCAGCGCCAGGATTCCCAGCCCAGGTTTaGCTGGCTCCAAAGCCCGCAGGCTGTGCCACACGG | + |
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Preference number: 6 (lower is better) Translates to: EAEAAPGFPAQV*LAPKPAGCATR Trigger: CCGTGTGGCACAGCCTGCGGGCTTTGGAGCCAGGCAAACCTGGGCTGGGAATCCTGGCGCTGCCTCGGCCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682338.1 ENST00000684324.1 |
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| CDS CCA 72 bp | CCGAGGCAGCGCCAGGATTCCCAGCCCAGGTTTGCCTaGCTCCAAAGCCCGCAGGCTGTGCCACACGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PRQRQDSQPRFA*LQSPQAVPHGP Trigger: GGGACCGTGTGGCACAGCCTGCGGGCTTTGGAGCCAGGCAAACCTGGGCTGGGAATCCTGGCGCTGCCTCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682338.1 ENST00000684324.1 |
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| CDS CAA 72 bp | GGAGGCCGAGGCAGCGCCAGGATTCCCAGCCCAGGTTaGCCTGGCTCCAAAGCCCGCAGGCTGTGCCACACG | + |
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Preference number: 6 (lower is better) Translates to: GGRGSARIPSPG*PGSKARRLCHT Trigger: CGTGTGGCACAGCCTGCGGGCTTTGGAGCCAGGCAAACCTGGGCTGGGAATCCTGGCGCTGCCTCGGCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682338.1 ENST00000684324.1 |
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| CDS GCA 72 bp | AGGTCATCCCGAGAGGCTGGGGCTGACACAGACTTCTaGACATCCAATGAGAAGGGAGCAGAGGAACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSSREAGADTDF*TSNEKGAEERW Trigger: CCAGCGTTCCTCTGCTCCCTTCTCATTGGATGTGCAGAAGTCTGTGTCAGCCCCAGCCTCTCGGGATGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000682793.1 ENST00000682838.1 ENST00000683578.1 ENST00000684324.1 |
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| CDS CAA 72 bp | AGATTTGGACACCGAGCATCACAGAGGGAATGTGAGTaGTTCACGTTCCTCCCGCCAGGCCTGGCAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RFGHRASQRECE*FTFLPPGLAEG Trigger: GCCTTCTGCCAGGCCTGGCGGGAGGAACGTGAACAACTCACATTCCCTCTGTGATGCTCGGTGTCCAAATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683661.1 |
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| CDS CAA 90 bp | TCATTTAGCAGATTTGGACACCGAGCATCACAGAGGGAATGTGAGTaGTTCACGTTCCTCCCGCCAGGCCTGGCAGAAGGCTGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SFSRFGHRASQRECE*FTFLPPGLAEGCGR Trigger: CCTGCCACAGCCTTCTGCCAGGCCTGGCGGGAGGAACGTGAACAACTCACATTCCCTCTGTGATGCTCGGTGTCCAAATCTGCTAAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000683661.1 |
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| CDS TCA 72 bp | GAACGCTGGAGGGAAACAGTGGTCATGACAAGGATCTaGAAAGACAGGAGATGCGGAGCCAGGCACAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ERWRETVVMTRI*KDRRCGARHSA Trigger: GGCACTGTGCCTGGCTCCGCATCTCCTGTCTTTTCAGATCCTTGTCATGACCACTGTTTCCCTCCAGCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000682793.1 ENST00000682838.1 |
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| CDS GCA 72 bp | CCCAGACTGGAGTACAGTGGTGCAAACACTGCTCAGTaGAGGATCAAATTCCCCAGGTCAAGCAGTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: PRLEYSGANTAQ*RIKFPRSSSPP Trigger: GGGAGGACTGCTTGACCTGGGGAATTTGATCCTGCACTGAGCAGTGTTTGCACCACTGTACTCCAGTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683661.1 |
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| CDS CAA 90 bp | TATAGGTATGAGCCAGTGTGCCCAGCTGGGTTAGGATTCCTTTGTTaGTTTGTTTGTTTGTTTGTTTGTTTGTTTCAGACAGGGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: YRYEPVCPAGLGFLC*FVCLFVCLFQTGVS Trigger: TGAGACCCCTGTCTGAAACAAACAAACAAACAAACAAACAAACAAACAAAGGAATCCTAACCCAGCTGGGCACACTGGCTCATACCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000683661.1 |
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