RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLCN5 (Homo sapiens)

Ensembl gene IDs: ENSG00000171365

Ensembl transcript IDs: ENST00000307367.2, ENST00000376088.7, ENST00000376091.8, ENST00000376108.7, ENST00000482218.2, ENST00000642383.1, ENST00000642885.1, ENST00000643129.1, ENST00000646398.1

Found 1121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTTGAAGCAGTGGCACAGGATGTTCCCACAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTGCCCAGGCTCAAGCCAGATGACACT +
Preference number: 1 (lower is better)
Translates to: LLKQWHRMFPQQQAT*TRGPSLPRLKPDDT
Trigger: AGTGTCATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTGTGGGAACATCCTGTGCCACTGCTTCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CCA 90 bp ACCCCGGCAGTGAAATCTCACTGCCGTAGGCATCCAGTGTGGAAATaGAGGCATGGCAGCAGCAACTGGGCCACATGGCAAAGGAAATGG +
Preference number: 1 (lower is better)
Translates to: TPAVKSHCRRHPVWK*RHGSSNWATWQRKW
Trigger: CCATTTCCTTTGCCATGTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCACACTGGATGCCTACGGCAGTGAGATTTCACTGCCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp AATGGCAACTTGAACAAGCTGCTGAAGGCTGAGTGTGGACTGGCGTaGGTACAAGAAACTCTTGGGGACCACGGTCTTAGGGGAGCTCCC +
Preference number: 1 (lower is better)
Translates to: NGNLNKLLKAECGLA*VQETLGDHGLRGAP
Trigger: GGGAGCTCCCCTAAGACCGTGGTCCCCAAGAGTTTCTTGTACTCACGCCAGTCCACACTCAGCCTTCAGCAGCTTGTTCAAGTTGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR GCA 90 bp GCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTCTGATCCAGTaGAGGGGACCCAGTTCCTCACAAGACAGTGTGGTCAGTCATCAG +
Preference number: 1 (lower is better)
Translates to: ASSELMGGLHLALIQ*RGPSSSQDSVVSHQ
Trigger: CTGATGACTGACCACACTGTCTTGTGAGGAACTGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp CATCCAGTGTGGAAATGGAGGCATGGCAGCAGCAACTGGGCCACATaGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTG +
Preference number: 1 (lower is better)
Translates to: HPVWKWRHGSSNWAT*QRKWLCVTSGPCVV
Trigger: CACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCATGTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCACACTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp CAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCCCCTCTaGTCTTCCTGGCCTCATTGGCTCACTCAACAGGTGGTAGTTTTC +
Preference number: 1 (lower is better)
Translates to: QRNSNSGPWAGTQPL*SSWPHWLTQQVVVF
Trigger: GAAAACTACCACCTGTTGAGTGAGCCAATGAGGCCAGGAAGATCAGAGGGGCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp CAAATGAAGAAGAGTCACCCACATGACATCACTGTCCCCCTTAGCTaGCGTGAGCAAGGTACTGACTGGGCCACCTCCTTTCTGGCCTAT +
Preference number: 1 (lower is better)
Translates to: QMKKSHPHDITVPLS*REQGTDWATSFLAY
Trigger: ATAGGCCAGAAAGGAGGTGGCCCAGTCAGTACCTTGCTCACGTCAGCTAAGGGGGACAGTGATGTCATGTGGGTGACTCTTCTTCATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 90 bp CTGTGGATCTTACCACCTCTACTCCACAGCTGGGCTGAGCCAGGATaGTGTGGCCAGAGAAAGAGGAGAGCATTGGAATATGTTTCTAAC +
Preference number: 1 (lower is better)
Translates to: LWILPPLLHSWAEPG*CGQRKRRALEYVSN
Trigger: GTTAGAAACATATTCCAATGCTCTCCTCTTTCTCTGGCCACAGCATCCTGGCTCAGCCCAGCTGTGGAGTAGAGGTGGTAAGATCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp GAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGTTTCACTGATTATGGTCTCTACATC +
Preference number: 1 (lower is better)
Translates to: EDKAHKSLGLPGYHH*EATVSGFTDYGLYI
Trigger: GATGTAGAGACCATAATCAGTGAAACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR TCA 90 bp GAACAGAGCTATAAAATCATCCAGGCTGAACTCTTACCCCGGCAGTaGAATCTCACTGCCGTAGGCATCCAGTGTGGAAATGGAGGCATG +
Preference number: 1 (lower is better)
Translates to: EQSYKIIQAELLPRQ*NLTAVGIQCGNGGM
Trigger: CATGCCTCCATTTCCACACTGGATGCCTACGGCAGTGAGATTTCACTGCCGGGGTAAGAGTTCAGCCTGGATGATTTTATAGCTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 90 bp GCTAAGAAAGCATGGCTAAGGGCTAGCAACACTCAGATAAACAACTaGTCTGGACAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCT +
Preference number: 1 (lower is better)
Translates to: AKKAWLRASNTQINN*SGQLSTKLPAETWA
Trigger: AGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTGTCCAGAGCAGTTGTTTATCTGAGTGTTGCTAGCCCTTAGCCATGCTTTCTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp AAACAGTGCTCCCCACAGACCACCAAATATGCCCAGCAGAATGAATaGCACGAGCTCAAAGAGATGCCATGGGGTGTGAAACTCCACATA +
Preference number: 1 (lower is better)
Translates to: KQCSPQTTKYAQQNE*HELKEMPWGVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATATTTGGTGGTCTGTGGGGAGCACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR TCA 90 bp AGCAGATGTCTTGGGTCGGCCCTATCCATAAAACCAGACTGCCCTTaGGCCAAACACTGCTTTGAACCACTCATTTGCTTAGAAAGCCTG +
Preference number: 1 (lower is better)
Translates to: SRCLGSALSIKPDCP*AKHCFEPLICLESL
Trigger: CAGGCTTTCTAAGCAAATGAGTGGTTCAAAGCAGTGTTTGGCTCAAGGGCAGTCTGGTTTTATGGATAGGGCCGACCCAAGACATCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp CCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATGATCCTATTTaGAGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTGGAGT +
Preference number: 1 (lower is better)
Translates to: PYTRDWLLQEVHDPI*RTYSSTIVRLVLWS
Trigger: ACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR GCA 90 bp GGTGTCACCAGGCCTTGTCCATACCCCTGTGTCTTAGGATGGCTCTaGATTTTATTTAGAATTCTAAGGACTCTTGAGGGAGTCACAGCT +
Preference number: 1 (lower is better)
Translates to: GVTRPCPYPCVLGWL*ILFRILRTLEGVTA
Trigger: AGCTGTGACTCCCTCAAGAGTCCTTAGAATTCTAAATAAAATGCAGAGCCATCCTAAGACACAGGGGTATGGACAAGGCCTGGTGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp AAGTATCATCAATGTCAGCTTATCTACCAGAGGATATCTGTTCTGTaGATCTTACCACCTCTACTCCACAGCTGGGCTGAGCCAGGATGC +
Preference number: 1 (lower is better)
Translates to: KYHQCQLIYQRISVL*ILPPLLHSWAEPGC
Trigger: GCATCCTGGCTCAGCCCAGCTGTGGAGTAGAGGTGGTAAGATCCACAGAACAGATATCCTCTGGTAGATAAGCTGACATTGATGATACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp CTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTaGGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTCCC +
Preference number: 1 (lower is better)
Translates to: LVVFTKECMRMHMQF*VFPGLPVCSLDLVP
Trigger: GGGAACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp AACTCCCCAGTCCACATCTTCCTTTTTAGACTATGTTGTTCCGCATaGCTAGGGAGTAGAATAAAGCGAGCAGTGAGCCATAGCTCTGGT +
Preference number: 1 (lower is better)
Translates to: NSPVHIFLFRLCCSA*LGSRIKRAVSHSSG
Trigger: ACCAGAGCTATGGCTCACTGCTCGCTTTATTCTACTCCCTAGTCATGCGGAACAACATAGTCTAAAAAGGAAGATGTGGACTGGGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp CATCATAGGTCCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTATTCCTCCACCATTGTACGACTTGT +
Preference number: 1 (lower is better)
Translates to: HHRSLHQGLAPPRSP*SYLKNLFLHHCTTC
Trigger: ACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGACCTATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CCA 90 bp TATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTaGTGTCACCAGGCCTTGTCCATACCCCTGTGTCTTAGGATGGCT +
Preference number: 1 (lower is better)
Translates to: YEIETGTFSIGYKHL*CHQALSIPLCLRMA
Trigger: AGCCATCCTAAGACACAGGGGTATGGACAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp CACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTaGCTACTGCAGTTGGAGCCAGCCCTACAAAGAGCTTACTACAGA +
Preference number: 1 (lower is better)
Translates to: HQLSGIKMSSQTGFL*LLQLEPALQRAYYR
Trigger: TCTGTAGTAAGCTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp TTCAGGCTATGCCTAGGAACAGGCGAGAATAAAGCTAAGAAAGCATaGCTAAGGGCTAGCAACACTCAGATAAACAACTGCTCTGGACAG +
Preference number: 1 (lower is better)
Translates to: FRLCLGTGENKAKKA*LRASNTQINNCSGQ
Trigger: CTGTCCAGAGCAGTTGTTTATCTGAGTGTTGCTAGCCCTTAGCCATGCTTTCTTAGCTTTATTCTCGCCTGTTCCTAGGCATAGCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 90 bp GACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTCAAGAAAGGG +
Preference number: 1 (lower is better)
Translates to: DSQQRIISPGFHHIH*QGLMSKLFFGFKKG
Trigger: CCCTTTCTTGAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR TCA 90 bp AGGATTCCTGAGAAGCTGAGGTTAATGAATGAGATTGATCAGGAGTaGGGTATCAAAGGGATATTGTCATTCTCTGGAGGGCCAATCGGT +
Preference number: 1 (lower is better)
Translates to: RIPEKLRLMNEIDQE*GIKGILSFSGGPIG
Trigger: ACCGATTGGCCCTCCAGAGAATGACAATATCCCTTTGATACCTCACTCCTGATCAATCTCATTCATTAACCTCAGCTTCTCAGGAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 90 bp TCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACTaGAGTTGGAGCCAGCCCTACAAAGAGCTTACTACAGAGAAATTC +
Preference number: 1 (lower is better)
Translates to: SQALKCRVRQVFFGY*SWSQPYKELTTEKF
Trigger: GAATTTCTCTGTAGTAAGCTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp GTTTCACTGATTATGGTCTCTACATCTTCCACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATC +
Preference number: 1 (lower is better)
Translates to: VSLIMVSTSSTVILS*VRTVNKGSFLRGFI
Trigger: GATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTGGAAGATGTAGAGACCATAATCAGTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR GCA 90 bp GTGAGGTATCAAAGGGATATTGTCATTCTCTGGAGGGCCAATCGGTaGTTAGCATCTACAAAGTATACCTTGGCACAGTGTTATCTGATT +
Preference number: 1 (lower is better)
Translates to: VRYQRDIVILWRANR*LASTKYTLAQCYLI
Trigger: AATCAGATAACACTGTGCCAAGGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATCCCTTTGATACCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp TACAAAGGAATGCATGAGGATGCATATGCAGTTCTGAGTCTTCCCTaGTTTACCAGTATGCAGTCTAGACTTGGTTCCCTTTGCTGTTTT +
Preference number: 1 (lower is better)
Translates to: YKGMHEDAYAVLSLP*FTSMQSRLGSLCCF
Trigger: AAAACAGCAAAGGGAACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGCATCCTCATGCATTCCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp ACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATaGGTGTCCAGTTATTTTAGTACTGGTGGTCTTTACAAAGGAATG +
Preference number: 1 (lower is better)
Translates to: TTHWPVTHTYRWEVQ*VSSYFSTGGLYKGM
Trigger: CATTCCTTTGTAAAGACCACCAGTACTAAAATAACTGGACACTCATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp CTCTCTTCAAAGGTGACATGCTCAGAGTTCCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCTGTGCATATACCTTCTTTTAAGTCT +
Preference number: 1 (lower is better)
Translates to: LSSKVTCSEFQQQCS*LNQNPPVHIPSFKS
Trigger: AGACTTAAAAGAAGGTATATGCACAGGGGGATTCTGGTTTAACCATGAACATTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR TCA 90 bp ATAAGGAGCATCAACAACCAGCCGGAAAAAGCATCACTCACACTGTaGATTAAGGCCCATGTTGACTCTTTGCTTTTATTGGTAATCTCT +
Preference number: 1 (lower is better)
Translates to: IRSINNQPEKASLTL*IKAHVDSLLLLVIS
Trigger: AGAGATTACCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTCACAGTGTGAGTGATGCTTTTTCCGGCTGGTTGTTGATGCTCCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR TCA 90 bp TGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTCTAGTTaGAGAGAATGGAATCAGGATCTTGGTTCGCCATCTGTGCTATAT +
Preference number: 1 (lower is better)
Translates to: CNVLPALHPELYDSS*REWNQDLGSPSVLY
Trigger: ATATAGCACAGATGGCGAACCAAGATCCTGATTCCATTCTCTTCAACTAGAATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR CCA 90 bp AGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAAC +
Preference number: 1 (lower is better)
Translates to: SDFFVGFLQVIGQDG*NFSCIVFSDCILAN
Trigger: GTTAGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR GCA 90 bp CCTTGTCTACCAGCTAACAAATGCCACCTGGAAAATTACCGTTTTTaGAGACAAGGAGAAAGCTCTATAACTTATCTTTGTGCACTTCAA +
Preference number: 1 (lower is better)
Translates to: PCLPANKCHLENYRF*RQGESSITYLCALQ
Trigger: TTGAAGTGCACAAAGATAAGTTATAGAGCTTTCTCCTTGTCTGCAAAAACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAGACAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp CAAGCAGTTTATAAATGCCAGAACATATGTTGTAGGGGTGTGGGATaGCTTTCCTTCCACCATCTTACACCATTCAAATATTTTCTTACC +
Preference number: 1 (lower is better)
Translates to: QAVYKCQNICCRGVG*LSFHHLTPFKYFLT
Trigger: GGTAAGAAAATATTTGAATGGTGTAAGATGGTGGAAGGAAAGCCATCCCACACCCCTACAACATATGTTCTGGCATTTATAAACTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp ACAATCAAGCAGTTTATAAATGCCAGAACATATGTTGTAGGGGTGTaGGATGGCTTTCCTTCCACCATCTTACACCATTCAAATATTTTC +
Preference number: 1 (lower is better)
Translates to: TIKQFINARTYVVGV*DGFPSTILHHSNIF
Trigger: GAAAATATTTGAATGGTGTAAGATGGTGGAAGGAAAGCCATCCCACACCCCTACAACATATGTTCTGGCATTTATAAACTGCTTGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 90 bp ATATGGAAAATGTGTTTTGGGTACCCAGTTAATACAACATATCCATaGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATT +
Preference number: 1 (lower is better)
Translates to: IWKMCFGYPVNTTYP*SVMSFPLYIQNSMI
Trigger: AATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAAACACATTTTCCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR CCA 90 bp TATAGTATGCTCTGCTCTTCCTGTAAAGGGTTTAGATTCAGCCTCTaGTGTCAAAACAATTCAACTGCTTTTCAGTTCAATCACAAATTA +
Preference number: 1 (lower is better)
Translates to: YSMLCSSCKGFRFSL*CQNNSTAFQFNHKL
Trigger: TAATTTGTGATTGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTTTACAGGAAGAGCAGAGCATACTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 90 bp AGCAAACTTGAGACACCCTCCTTATCGCTACTGCACTATGAAATATaGCCAAACCTTTCATTGTCATTAAATACCAGAAATAGTAACATT +
Preference number: 1 (lower is better)
Translates to: SKLETPSLSLLHYEI*PNLSLSLNTRNSNI
Trigger: AATGTTACTATTTCTGGTATTTAATGACAATGAAAGGTTTGGTCATATTTCATAGTGCAGTAGCGATAAGGAGGGTGTCTCAAGTTTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 2 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCGGCAGGGGAATTGCTTaGACCCGGGAGGCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSGRGIA*TREAGG
Trigger: GCCTCCTGCCTCCCGGGTCCAAGCAATTCCCCTGCC...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp TGGCCCATGGGCCGGAACCCAGCCCCTCTGATCTTCCTGGCCTCATaGGCTCACTCAACAGGTGGTAGTTTTCCCATAGCCAGAAATGAA +
Preference number: 2 (lower is better)
Translates to: WPMGRNPAPLIFLAS*AHSTGGSFPIARNE
Trigger: TTCATTTCTGGCTATGGGAAAACTACCACCTGTTGAGTGAGCCAATGAGGCCAGGAAGATCAGAGGGGCTGGGTTCCGGCCCATGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GTAGACTCCCACGCCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTAGGCTGAGTGTGGACTaGCGTGAGTACAAGAAACTC +
Preference number: 2 (lower is better)
Translates to: VDSHASRSVRQFTPFACVRLSVD*REYKKL
Trigger: GAGTTTCTTGTACTCACGCCAGTCCACACTCAGCCT...AACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGGCGTGGGAGTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CCA 90 bp TCCAAAGGCTACAGATACACCAGCTGCTGCTGCAGCCGACAAGACCTCTCTGCGCCCTACACCAGGGATTaGCTCCTCCAAGAAGTCCAT +
Preference number: 2 (lower is better)
Translates to: SKGYRYTSCCCSRQDLSAPYTRD*LLQEVH
Trigger: ATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG...CGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CAA 90 bp GCAGCCGACAAGACCTCTCTGCGCTTGGCTTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGGATGTTCCCACAGCAGCAAGCCACG +
Preference number: 2 (lower is better)
Translates to: AADKTSLRLASFFLY*LKQWHRMFPQQQAT
Trigger: CGTGGCTTGCTGCTGTGGGAACATCCTGTGCCACTGCTTCAACAAATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR TCA 90 bp TCCAAAGGCTACAGATACACCAGCTGCTGCTGCAGCCGACAAGACCTCTCTGCGCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: SKGYRYTSCCCSRQDLSALSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...CGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR TCA 90 bp TCCATGGGTGTAAGGTCAGTCACAGTGAAGGGGCTGAGATCGAGGATGTTCCGAGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 2 (lower is better)
Translates to: SMGVRSVTVKGLRSRMFRERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...TCGGAACATCCTCGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR GCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAAGTGAGCCGAGATTGTaGCACTGCACTCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: QLSTKLPAETWALLALVESEPRL*HCTPTW
Trigger: CCAGGTGGGAGTGCAGTGGCACAATCTCGGCTCACT...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAGTGGAAATGGAGGCATaGCAGCAGCAACTGGGCCAC +
Preference number: 2 (lower is better)
Translates to: QLSTKLPAETWALLALVEVEMEA*QQQLGH
Trigger: GTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCAC...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp TCCATGGGTGTAAGGTCAGTCACAGTGAAGGGGCTGAGATCGAGGATGTTCCGACATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: SMGVRSVTVKGLRSRMFRHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...TCGGAACATCCTCGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp CTGCTGCAGCCGACAAGACCTCTCTGCGCTTGGCTTCATTCTTCCTGTATTTGTAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 2 (lower is better)
Translates to: LLQPTRPLCAWLHSSCICKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...ACAAATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGGCTGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR GCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 2 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTCGTAGGCATCCAGTGTaGAAATGGAGGCATGGCAGC +
Preference number: 2 (lower is better)
Translates to: PKRCFPASSELMGGLHLARRHPV*KWRHGS
Trigger: GCTGCCATGCCTCCATTTCCACACTGGATGCCTACG...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAGGAGGCCGAGATGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: QLSTKLPAETWALLALVEGGRDG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCATCTCGGCCTCC...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp AGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTGGGAAGCCACAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 2 (lower is better)
Translates to: RTKPTSLWDSRDTTTGKPQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...TGGCTTCCCAGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR TCA 90 bp AGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTGGGAAGCCAGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 2 (lower is better)
Translates to: RTKPTSLWDSRDTTTGKPDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...TGGCTTCCCAGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAACTCCACAGCTGGGCTaGGCCAGGATGCTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLTPQLG*ARMLWP
Trigger: TGGCCACAGCATCCTGGCTCAGCCCAGCTGTGGAGT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCGAATTCAGCGCATGGTaGGGGGAGAGAAAGACAATG +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSEFSAW*GERKTM
Trigger: CATTGTCTTTCTCTCCCCTCACCATGCGCTGAATTC...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAAGGCTGAAGGCCCTTTaGCAGGAACTAAGAGGTAGG +
Preference number: 2 (lower is better)
Translates to: QLSTKLPAETWALLALVERLKAL*QELRGR
Trigger: CCTACCTCTTAGTTCCTGCCAAAGGGCCTTCAGCCT...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp GCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTaGGTGGGAATATGCAGAATGACCGCTGATTCTGGGCTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: ATLKMRYTEVFGGRG*VGICRMTADSGLEG
Trigger: TCCTTCCAGCCCAGAATCAGCGGTCATTCTGCATATTCCCACCAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp GACAAGTATCAATGGCTTTGGCCCTCACAGAGGAGCAAAGCCCTGTaGGTCCCATCAACTCAGACGTATCTTCCAGTTTCTGTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: DKYQWLWPSQRSKAL*VPSTQTYLPVSVLR
Trigger: TCTGAGAACAGAAACTGGAAGATACGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp CTCATCTGTGCTGATGATAAGCTGGGACCAACTATTCCACTCTGGACATTTGTCTTGGTAATCTCTCGGTaGCTATCCCGGTCTCGAGAC +
Preference number: 2 (lower is better)
Translates to: LICADDKLGPTIPLWTFVLVISR*LSRSRD
Trigger: GTCTCGAGACCGGGATAGGCACCGAGAGATTACCAA...GACAAATGTCCAGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCACAGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CCA 90 bp ACTACACCAGCTATTGAAGACGGTCCATTCCTGGTGGTAATAAGCCAGCTGTTCGTACGACTTGTCCTCTaGAGTAGAAATGGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: TTPAIEDGPFLVVISQLFVRLVL*SRNGWS
Trigger: GCTCCAGCCATTTCTACTCCAGAGGACAAGTCGTAC...GAACAGCTGGCTTATTACCACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAGCTTGCATTTGGCTCTaGTCCAGTGCAGGGGACCCA +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLACIWL*SSAGDP
Trigger: TGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGC...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAAGTGAGCCGAGATTGTaGCACTGCACTCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLSEPRL*HCTPTW
Trigger: CCAGGTGGGAGTGCAGTGGCACAATCTCGGCTCACT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp AGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATGCTCCGTGAAATACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 2 (lower is better)
Translates to: SFRVGGVYGGNGGECSVKYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...TTTCACGGAGCATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTACACCAGCTGCTGCTaGAGCCGACAAGACAGTGAT +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLYTSCC*SRQDSD
Trigger: ATCACTGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646398.1
3UTR-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCTGGCTTTCCTTTCTCTaGTTTGAAAAGCAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSWLSFL*FEKQSP
Trigger: GGGGCTTTGCTTTTCAAACCAGAGAAAGGAAAGCCA...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCATGGCAGCAGCAACTaGGCCACATGGCAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: DIVILWRANRCLASTKYTHGSSN*ATWQRK
Trigger: TTTCCTTTGCCATGTGGCCCAGTTGCTGCTGCCATG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCGCTGATTCTGGGCTaGAAGGATGATGAGAAGTGC +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLPLILG*KDDEKC
Trigger: GCACTTCTCATCATCCTTCCAGCCCAGAATCAGCGG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTCTCTCGTTCCTTTTATaGCTGGATGGCTACCAGCTA +
Preference number: 2 (lower is better)
Translates to: PKRCFPASSELMGGLHLALSFLL*LDGYQL
Trigger: TAGCTGGTAGCCATCCAGCCATAAAAGGAACGAGAG...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGCCTGTTCCAACACCTTaGATATATTTGGAAGCATCC +
Preference number: 2 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALPVPTP*IYLEAS
Trigger: GGATGCTTCCAAATATATTCAAGGTGTTGGAACAGG...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGAATTCTAAGGACTCTTaGGGGAGTCACAGCTGCCTA +
Preference number: 2 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLNSKDS*GSHSCL
Trigger: TAGGCAGCTGTGACTCCCTCAAGAGTCCTTAGAATT...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 2 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR GCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAATGGAGGGGGAGTAATTaGACACAGGTAAAACTACAG +
Preference number: 2 (lower is better)
Translates to: QLSTKLPAETWALLALVEWRGSN*TQVKLQ
Trigger: CTGTAGTTTTACCTGTGTGCAATTACTCCCCCTCCA...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLCADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCAGGCACCTTTTCAATTaGATACAAGCACCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSRHLFN*IQAPLV
Trigger: CACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACGTAGGCATCCAGTGTaGAAATGGAGGCATGGCAGC +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLRRHPV*KWRHGS
Trigger: GCTGCCATGCCTCCATTTCCACACTGGATGCCTACG...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACCCCGACAAGTATCAATaGCTTTGGCCCTCACAGAGG +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYPDKYQ*LWPSQR
Trigger: CCTCTGTGAGGGCCAAAGCCATTGATACTTGTCGGG...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp TCCAAGAAGTCCATGATCCTATTTGAAGAACCTATTCCTCCACCATaGTACGACTTGTCCTCTGGAGTAGAAATGGCTGGAGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: SKKSMILFEEPIPPP*YDLSSGVEMAGAGR
Trigger: TCTACCAGCTCCAGCCATTTCTACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CAA 90 bp GGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTCAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GQSTKDHFSGVSSHP*PGSYEQTLLWLQER
Trigger: CCTTTCTTGAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR CAA 90 bp GGATCTTGGTTCGCCATCTGTGCTATATGCTTTAACACATCCTTTTaGGTAATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCAC +
Preference number: 2 (lower is better)
Translates to: GSWFAICAICFNTSF*VMIPSNRPLCVTRH
Trigger: GTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATTACCAAAAAGGATGTGTTAAAGCATATAGCACAGATGGCGAACCAAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAGATACACCAGCTGCTaGTGCAGCCGACAAGACAGT +
Preference number: 2 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDRYTSC*CSRQDS
Trigger: ACTGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646398.1
3UTR-3UTR CCA 90 bp AGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATGCTCCGTGAAAATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 2 (lower is better)
Translates to: SFRVGGVYGGNGGECSVKIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...TTTCACGGAGCATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCCCCTGTGTCTTAGGATaGCTCTGCATTTTATTTAGA +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSPCVLG*LCILFR
Trigger: TCTAAATAAAATGCAGAGCCATCCTAAGACACAGGG...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAGGATACAAGCACCTTTaGTGTCACCAGGCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLGYKHL*CHQALS
Trigger: GGACAAGGCCTGGTGACACCAAAGGTGCTTGTATCC...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTATGTTGTAGGGGTGTaGGATGGCTTTCCTTCCACC +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYYVVGV*DGFPST
Trigger: GGTGGAAGGAAAGCCATCCCACACCCCTACAACATA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTCCGAGTGTATTCATTaGGGAAAGCCAGGATGGCAG +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQSECIH*GKPGWQ
Trigger: CTGCCATCCTGGCTTTCCCCAATGAATACACTCGGA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATACCAAGTTCTCACAGTaGAGATCTAAGAATCCCTCC +
Preference number: 2 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHTKFSQ*RSKNPS
Trigger: GGAGGGATTCTTAGATCTTCACTGTGAGAACTTGGT...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR TCA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCAAGGCAGCAAAGAATaGACGCCACAATGTTTTGAG +
Preference number: 2 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHQGSKE*TPQCFE
Trigger: CTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTG...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp AGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATGCTCCGTGAAACAGCCGACAAGACAGTaGTGTATTTATTTATATGGA +
Preference number: 2 (lower is better)
Translates to: SFRVGGVYGGNGGECSVKQPTRQ*CIYLYG
Trigger: TCCATATAAATAAATACATCACTGTCTTGTCGGCTG...TTTCACGGAGCATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
3UTR-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACACATGGCAAAGGAAATaGCTGTGTGTCACCTCTGGT +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYTWQRK*LCVTSG
Trigger: ACCAGAGGTGACACACAGCCATTTCCTTTGCCATGT...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCGATCTCACTAAACCCTaGTTACTTCATCATGTTCAA +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSDLTKP*LLHHVQ
Trigger: TTGAACATGATGAAGTAACCAGGGTTTAGTGAGATC...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGATGCATATGCAGTTCTaGGTCTTCCCTGGTTTACCA +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQMHMQF*VFPGLP
Trigger: TGGTAAACCAGGGAAGACTCAGAACTGCATATGCAT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCATGGGAATATGCAGAATaGCCGCTGATTCTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSWEYAE*PLILGW
Trigger: CCAGCCCAGAATCAGCGGTCATTCTGCATATTCCCA...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAAAACCAGACTGCCCTTaGGCCAAACACTGCTTTGAA +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLKPDCP*AKHCFE
Trigger: TTCAAAGCAGTGTTTGGCTCAAGGGCAGTCTGGTTT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACGACATTAGCTTCAGCTaGACTTTCACCAACTCTCAG +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYDISFS*TFTNSQ
Trigger: CTGAGAGTTGGTGAAAGTTCAGCTGAAGCTAATGTC...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 2 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp GGGTTTCATCACATCCATTGCCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTCAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: GFHHIHCQGLMSKLFFGFNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...GAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTGGCTTTCCTTTCTCTaGTTTGAAAAGCAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYWLSFL*FEKQSP
Trigger: GGGGCTTTGCTTTTCAAACCAGAGAAAGGAAAGCCA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTTCATTTCAAGGAAGCTaGAAGAAATCATTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: PKRCFPASSELMGGLHLASFQGS*KKSFLA
Trigger: AGCAAGGAATGATTTCTTCCAGCTTCCTTGAAATGA...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTCTGTTAAAGTGGCAATaGCAGAAAGAACATTTTCCT +
Preference number: 2 (lower is better)
Translates to: PKRCFPASSELMGGLHLALLKWQ*QKEHFP
Trigger: AGGAAAATGTTCTTTCTGCCATTGCCACTTTAACAG...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCTTTAGATTCAGCCTCTaGTGTCAAAACAATTCAACT +
Preference number: 2 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSFRFSL*CQNNST
Trigger: AGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAA...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAACAGGAGGCTGGCCTTaGTCAAATGAAGAAGAGTCA +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLTGGWP*SNEEES
Trigger: TGACTCTTCTTCATTTGACCAAGGCCAGCCTCCTGT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp GGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACTGCAGTaGGAGCCAGCCCTACAAAGAGCTTACTACAGAGAAATTCAAATA +
Preference number: 2 (lower is better)
Translates to: GIKMSSQTGFLWLLQ*EPALQRAYYREIQI
Trigger: TATTTGAATTTCTCTGTAGTAAGCTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 2 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACGCTGGGAGGTACAATaGGTGTCCAGTTATTTTAGT +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLRWEVQ*VSSYFS
Trigger: ACTAAAATAACTGGACACTCATTGTACCTCCCAGCG...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCTACCAGCTAACAAATaGCACCTGGAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQLPANK*HLENYR
Trigger: ACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCCCTGGTTTACCAGTATaGAGTCTAGACTTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFPGLPV*SLDLVP
Trigger: GGGAACCAAGTCTAGACTGCATACTGGTAAACCAGG...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACCCCCTCACATCTGAATaGGTTCATAAGATCTTGGTT +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYPLTSE*VHKILV
Trigger: AACCAAGATCTTATGAACGCATTCAGATGTGAGGGG...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: DIVILWRANRCLASTKYTNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTCATTTCAAGGAAGCTaGAAGAAATCATTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLSFQGS*KKSFLA
Trigger: AGCAAGGAATGATTTCTTCCAGCTTCCTTGAAATGA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCCATCATTCATGGAGGTaGCATCTGGGTAAGAGAATT +
Preference number: 2 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTHHSWR*HLGKRI
Trigger: AATTCTCTTACCCAGATGCCACCTCCATGAATGATG...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGATGGGGACAACACACTaGCCTGTTACACATACTTAT +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQMGTTH*PVTHTY
Trigger: ATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCAT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAACATGGCAAAGGAAATaGCTGTGTGTCACCTCTGGT +
Preference number: 2 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSTWQRK*LCVTSG
Trigger: ACCAGAGGTGACACACAGCCATTTCCTTTGCCATGT...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAATTTAGATTCAGCCTCTaGTGTCAAAACAATTCAACT +
Preference number: 2 (lower is better)
Translates to: QLSTKLPAETWALLALVEFRFSL*CQNNST
Trigger: AGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAA...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp ACCCAGATCCAGATGTTTAGAAATGAGAATGTGGCCAGCAAACGTTaGGGGAGTAACTTAAAGTTGCTAACACCCATTGTTCTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: TQIQMFRNENVASKR*GSNLKLLTPIVLRN
Trigger: ATTTCTGAGAACAATGGGTGTTAGCAACTTTAAGTTACTCCCCAAACGTTTGCTGGCCACATTCTCATTTCTAAACATCTGGATCTGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR GCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 2 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp AAACCAGCTAACGAACCTGATAAAAGCCCAATAAGGAGCATCAACAACCAGCCGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: KPANEPDKSPIRSINNQPFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CGGCTGGTTGTTGATGCTCCTTATTGGGCTTTTATCAGGTTCGTTAGCTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CCA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACATGGAGGTGGCATCTaGGTAAGAGAATTAGTTAGG +
Preference number: 2 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSHGGGI*VRELVR
Trigger: CCTAACTAATTCTCTTACCCAGATGCCACCTCCATG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTGGCTCTATTAGAATaGCTAAAATCCAAAACACTG +
Preference number: 2 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLLALLE*LKSKTL
Trigger: CAGTGTTTTGGATTTTAGCCATTCTAATAGAGCCAG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR GCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACCTCCTTATCGCTACTaGACTATGAAATATGACCAA +
Preference number: 2 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLPPYRY*TMKYDQ
Trigger: TTGGTCATATTTCATAGTGCAGTAGCGATAAGGAGG...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCATGGAGGGCCAATCGGTaGTTAGCATCTACAAAGTAT +
Preference number: 2 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSWRANR*LASTKY
Trigger: ATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCA...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTGATATTGTCATTCTCTaGAGGGCCAATCGGTGCTTA +
Preference number: 2 (lower is better)
Translates to: MATSYSYLENPNSVETLIDIVIL*RANRCL
Trigger: TAAGCACCGATTGGCCCTCCAGAGAATGACAATATC...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACGATCTCACTAAACCCTaGTTACTTCATCATGTTCAA +
Preference number: 2 (lower is better)
Translates to: ETWALLALVEATFWMPSYDLTKP*LLHHVQ
Trigger: TTGAACATGATGAAGTAACCAGGGTTTAGTGAGATC...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 2 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR TCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCACTAGTCTTTTGCCATTaGGGTATGTGGCCATTTGAT +
Preference number: 2 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSLVFCH*GMWPFD
Trigger: ATCAAATGGCCACATACCTCAATGGCAAAAGACTAG...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR GCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCACTACCAGCTAACAAATaGCACCTGGAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSLPANK*HLENYR
Trigger: ACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAG...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 2 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 2 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp TCCCATCCAAGAAATGCAAACTCCACACGTCATATACTTTCTTTCTaGGGTGATTTGGCAAAATTAGACTACACCATGGAAAAACCAATT +
Preference number: 2 (lower is better)
Translates to: SHPRNANSTRHILSF*GDLAKLDYTMEKPI
Trigger: AATTGGTTTTTCCATGGTGTAGTCTAATTTTGCCAAATCACCCAAGAAAGAAAGTATATGACGTGTGGAGTTTGCATTTCTTGGATGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 2 (lower is better)
Translates to: MATSYSYLENPNSVETLIIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACTAACAAATGCCACCTaGAAAATTACCGTTTTTGCA +
Preference number: 2 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSLTNAT*KITVFA
Trigger: TGCAAAAACGGTAATTTTCCAGGTGGCATTTGTTAG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 90 bp TTGGGTGATTTGGCAAAATTAGACTACACCATGGAAAAACCAATTTaGTTCCCTACATCTATTCAAACCTTTACCCAGATCCAGATGTTT +
Preference number: 2 (lower is better)
Translates to: LGDLAKLDYTMEKPI*FPTSIQTFTQIQMF
Trigger: AAACATCTGGATCTGGGTAAAGGTTTGAATAGATGTAGGGAACAAAATTGGTTTTTCCATGGTGTAGTCTAATTTTGCCAAATCACCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAGAAAGAGGAGAGCATTaGAATATGTTTCTAACCAAA +
Preference number: 2 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSERGEH*NMFLTK
Trigger: TTTGGTTAGAAACATATTCCAATGCTCTCCTCTTTC...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCATTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 2 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 72 bp AGATGCCCTCCCGCCCAAGAGCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCATCAGAGGCACGATGT +
Preference number: 3 (lower is better)
Translates to: RCPPAQEHLPPT*LSWLQPSEARC
Trigger: ACATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGGGAGGGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR CCA 72 bp CCGGCAGTGAAATCTCACTGCCGTAGGCATCCAGTGTaGAAATGGAGGCATGGCAGCAGCAACTGGGCCACA +
Preference number: 3 (lower is better)
Translates to: PAVKSHCRRHPV*KWRHGSSNWAT
Trigger: TGTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCACACTGGATGCCTACGGCAGTGAGATTTCACTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 72 bp ACCTATAGGTGCTCCAAAGGCTACAGATACACCAGCTaGTGCTGCAGCCGACAAGACCTCTCTGCGCTTGGC +
Preference number: 3 (lower is better)
Translates to: TYRCSKGYRYTS*CCSRQDLSALG
Trigger: GCCAAGCGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGAGCACCTATAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR GCA 72 bp GAACTGATGGGTGGCTTGCATTTGGCTCTGATCCAGTaGAGGGGACCCAGTTCCTCACAAGACAGTGTGGTC +
Preference number: 3 (lower is better)
Translates to: ELMGGLHLALIQ*RGPSSSQDSVV
Trigger: GACCACACTGTCTTGTGAGGAACTGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGCCACCCATCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 72 bp AGGTGCTCCAAAGGCTACAGATACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCTGCGCTTGGCTTCATT +
Preference number: 3 (lower is better)
Translates to: RCSKGYRYTSCC*SRQDLSALGFI
Trigger: AATGAAGCCAAGCGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CCA 72 bp GTGAAATCTCACTGCCGTAGGCATCCAGTGTGGAAATaGAGGCATGGCAGCAGCAACTGGGCCACATGGCAA +
Preference number: 3 (lower is better)
Translates to: VKSHCRRHPVWK*RHGSSNWATWQ
Trigger: TTGCCATGTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCACACTGGATGCCTACGGCAGTGAGATTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp AAAGCCCTCATCACCCCCGACAAGTATCAATGGCTTTaGCCCTCACAGAGGAGCAAAGCCCTGTTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: KALITPDKYQWL*PSQRSKALLVP
Trigger: TGGGACCAACAGGGCTTTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTTGTCGGGGGTGATGAGGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp AAGAGTCACCCACATGACATCACTGTCCCCCTTAGCTaGCGTGAGCAAGGTACTGACTGGGCCACCTCCTTT +
Preference number: 3 (lower is better)
Translates to: KSHPHDITVPLS*REQGTDWATSF
Trigger: AAAGGAGGTGGCCCAGTCAGTACCTTGCTCACGTCAGCTAAGGGGGACAGTGATGTCATGTGGGTGACTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp GATGCTAAAGCCCTCATCACCCCCGACAAGTATCAATaGCTTTGGCCCTCACAGAGGAGCAAAGCCCTGTTG +
Preference number: 3 (lower is better)
Translates to: DAKALITPDKYQ*LWPSQRSKALL
Trigger: CAACAGGGCTTTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTTGTCGGGGGTGATGAGGGCTTTAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp TTGAACAAGCTGCTGAAGGCTGAGTGTGGACTGGCGTaGGTACAAGAAACTCTTGGGGACCACGGTCTTAGG +
Preference number: 3 (lower is better)
Translates to: LNKLLKAECGLA*VQETLGDHGLR
Trigger: CCTAAGACCGTGGTCCCCAAGAGTTTCTTGTACTCACGCCAGTCCACACTCAGCCTTCAGCAGCTTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR GCA 72 bp GCATGGCTAAGGGCTAGCAACACTCAGATAAACAACTaGTCTGGACAGCTCAGCACCAAACTTCCTGCGGAA +
Preference number: 3 (lower is better)
Translates to: AWLRASNTQINN*SGQLSTKLPAE
Trigger: TTCCGCAGGAAGTTTGGTGCTGAGCTGTCCAGAGCAGTTGTTTATCTGAGTGTTGCTAGCCCTTAGCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp AATGGCTTTGGCCCTCACAGAGGAGCAAAGCCCTGTTaGTCCCATCAACTCAGACGTATCTTCCAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: NGFGPHRGAKPC*SHQLRRIFQFL
Trigger: CAGAAACTGGAAGATACGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCCTCTGTGAGGGCCAAAGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp TCCCCACAGACCACCAAATATGCCCAGCAGAATGAATaGCACGAGCTCAAAGAGATGCCATGGGGTGTGAAA +
Preference number: 3 (lower is better)
Translates to: SPQTTKYAQQNE*HELKEMPWGVK
Trigger: TTTCACACCCCATGGCATCTCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATATTTGGTGGTCTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CAA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 3 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CAA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTGGTGTCACCAGGCCTaGTCCATACCCCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLWCHQA*SIPLCL
Trigger: AAGACACAGGGGTATGGACAAGGCCTGGTGACACCA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp TCCATGGGTGTAAGGTCAGTCACAGTGAAGGGGCTGAGATCGAGGATGTTCCGAAACACAAATGGCAACTaGAACAAGCTGCTGAAGGCT +
Preference number: 3 (lower is better)
Translates to: SMGVRSVTVKGLRSRMFRNTNGN*NKLLKA
Trigger: AGCCTTCAGCAGCTTGTTCAAGTTGCCATTTGTGTT...TCGGAACATCCTCGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp AAACCAGCTAACGAACCTGATAAAAGCCCAATAAGGAGCATCAACAACCAGCCGTCCCTACACCAGGGATaGGCTCCTCCAAGAAGTCCA +
Preference number: 3 (lower is better)
Translates to: KPANEPDKSPIRSINNQPSLHQG*APPRSP
Trigger: TGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA...CGGCTGGTTGTTGATGCTCCTTATTGGGCTTTTATCAGGTTCGTTAGCTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp AATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCACTGCCGCAGTCCCAGACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 3 (lower is better)
Translates to: NDSKQSPVVCNQALPQSQTKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...CTGGGACTGCGGCAGTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CCA 72 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTaGTGTCACCAGGCCTTGTCCATACCCCTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: ETGTFSIGYKHL*CHQALSIPLCL
Trigger: AAGACACAGGGGTATGGACAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp AGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATGCTCCGTGAAACCACCATTGTACGACTaGTCCTCTGGAGTAGAAATG +
Preference number: 3 (lower is better)
Translates to: SFRVGGVYGGNGGECSVKPPLYD*SSGVEM
Trigger: CATTTCTACTCCAGAGGACAAGTCGTACAATGGTGG...TTTCACGGAGCATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR TCA 72 bp CTTGGGTCGGCCCTATCCATAAAACCAGACTGCCCTTaGGCCAAACACTGCTTTGAACCACTCATTTGCTTA +
Preference number: 3 (lower is better)
Translates to: LGSALSIKPDCP*AKHCFEPLICL
Trigger: TAAGCAAATGAGTGGTTCAAAGCAGTGTTTGGCTCAAGGGCAGTCTGGTTTTATGGATAGGGCCGACCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp CAATGTCAGCTTATCTACCAGAGGATATCTGTTCTGTaGATCTTACCACCTCTACTCCACAGCTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: QCQLIYQRISVL*ILPPLLHSWAE
Trigger: CTCAGCCCAGCTGTGGAGTAGAGGTGGTAAGATCCACAGAACAGATATCCTCTGGTAGATAAGCTGACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp TCTGGACAGCTCAGCACCAAACTTCCTGCGGAAACTTaGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGG +
Preference number: 3 (lower is better)
Translates to: SGQLSTKLPAET*ALLALVEATFW
Trigger: CCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACAGGAGCAAAGCCCTGTaGGTCCCATCAACTCAGACG +
Preference number: 3 (lower is better)
Translates to: ETWALLALVEATFWMPSYRSKAL*VPSTQT
Trigger: CGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCCT...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp TATAAAATCATCCAGGCTGAACTCTTACCCCGGCAGTaGAATCTCACTGCCGTAGGCATCCAGTGTGGAAAT +
Preference number: 3 (lower is better)
Translates to: YKIIQAELLPRQ*NLTAVGIQCGN
Trigger: ATTTCCACACTGGATGCCTACGGCAGTGAGATTTCACTGCCGGGGTAAGAGTTCAGCCTGGATGATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp AGAGCAGAGTCAGCGATCACCCCAGGACAACTACACTaGTTGAACTTCAAATTGACACAGCTACTGAGCTCT +
Preference number: 3 (lower is better)
Translates to: RAESAITPGQLH*LNFKLTQLLSS
Trigger: AGAGCTCAGTAGCTGTGTCAATTTGAAGTTCAATCAGTGTAGTTGTCCTGGGGTGATCGCTGACTCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp CTCCGGGGTTTCATCACATCCATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCTTCAAGAAAGGGGTAT +
Preference number: 3 (lower is better)
Translates to: LRGFITSIARVL*ANSSLASRKGY
Trigger: ATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCCCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR GCA 72 bp ACCTATAGGTGCTCCAAAGGCTACAGATACACCAGCTaGTGCTGCAGCCGACAAGACAGTGATGTATTTATT +
Preference number: 3 (lower is better)
Translates to: TYRCSKGYRYTS*CCSRQDSDVFI
Trigger: AATAAATACATCACTGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGAGCACCTATAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
3UTR CCA 72 bp TGTCGAGTCAGACAGGTTTTCTTTGGCTACTGCAGTTaGAGCCAGCCCTACAAAGAGCTTACTACAGAGAAA +
Preference number: 3 (lower is better)
Translates to: CRVRQVFFGYCS*SQPYKELTTEK
Trigger: TTTCTCTGTAGTAAGCTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTGACTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp TCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTaGCTACTGCAGTTGGAGCCAGCCCTACAAAGAGCT +
Preference number: 3 (lower is better)
Translates to: SGIKMSSQTGFL*LLQLEPALQRA
Trigger: AGCTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp CTCTTTGCTTTTATTGGTAATCTCTCGGTGCCTATCCCGGTCTCGAGACTTCTCTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 3 (lower is better)
Translates to: LFAFIGNLSVPIPVSRLLYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...GAGAAGTCTCGAGACCGGGATAGGCACCGAGAGATTACCAATAAAAGCAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCACCAGCTACTCTTACTaGGAAAATCCTAACTCTGTT +
Preference number: 3 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSTSYSY*ENPNSV
Trigger: AACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp AGGGATTGGCTCCTCCAAGAAGTCCATGATCCTATTTaGAGAACCTATTCCTCCACCATTGTACGACTTGTC +
Preference number: 3 (lower is better)
Translates to: RDWLLQEVHDPI*RTYSSTIVRLV
Trigger: GACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGGAGCCAATCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR GCA 72 bp CAAAGGGATATTGTCATTCTCTGGAGGGCCAATCGGTaGTTAGCATCTACAAAGTATACCTTGGCACAGTGT +
Preference number: 3 (lower is better)
Translates to: QRDIVILWRANR*LASTKYTLAQC
Trigger: ACACTGTGCCAAGGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 72 bp TCTCCCCTTGAGGCACACAATCAAGCAGTTTATAAATaGCAGAACATATGTTGTAGGGGTGTGGGATGGCTT +
Preference number: 3 (lower is better)
Translates to: SPLEAHNQAVYK*QNICCRGVGWL
Trigger: AAGCCATCCCACACCCCTACAACATATGTTCTGGCATTTATAAACTGCTTGATTGTGTGCCTCAAGGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 72 bp CAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTC +
Preference number: 3 (lower is better)
Translates to: QRIISPGFHHIH*QGLMSKLFFGF
Trigger: GAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CAA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 3 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCAACACAAAAGCAAACTaGAGACACCCTCCTTATCGC +
Preference number: 3 (lower is better)
Translates to: DIVILWRANRCLASTKYTNTKAN*RHPPYR
Trigger: GCGATAAGGAGGGTGTCTCAAGTTTGCTTTTGTGTT...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACAAGTATCAATGGCTTaGGCCCTCACAGAGGAGCAA +
Preference number: 3 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLQVSMA*ALTEEQ
Trigger: TTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTTG...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp AGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGGGTCTTGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA +
Preference number: 3 (lower is better)
Translates to: SQQRIISPGFHHIHCQGLDSLLL*VISRCL
Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...AAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 3 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 3 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR TCA 72 bp GTCCACATCTTCCTTTTTAGACTATGTTGTTCCGCATaGCTAGGGAGTAGAATAAAGCGAGCAGTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: VHIFLFRLCCSA*LGSRIKRAVSH
Trigger: ATGGCTCACTGCTCGCTTTATTCTACTCCCTAGTCATGCGGAACAACATAGTCTAAAAAGGAAGATGTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp ATACCACCACTGGGAAGCCACTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTTCCACAGTCATACTGT +
Preference number: 3 (lower is better)
Translates to: IPPLGSHCKWFH*LWSLHLPQSYC
Trigger: ACAGTATGACTGTGGAAGATGTAGAGACCATAATCAGTGAAACCACTTACAGTGGCTTCCCAGTGGTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR CCA 72 bp GGCAAAGTCCTTGTCTACCAGCTAACAAATGCCACCTaGAAAATTACCGTTTTTGCAGACAAGGAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: GKVLVYQLTNAT*KITVFADKEKA
Trigger: AGCTTTCTCCTTGTCTGCAAAAACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAGACAAGGACTTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp TCAGGAGTGAGGTATCAAAGGGATATTGTCATTCTCTaGAGGGCCAATCGGTGCTTAGCATCTACAAAGTAT +
Preference number: 3 (lower is better)
Translates to: SGVRYQRDIVIL*RANRCLASTKY
Trigger: ATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATCCCTTTGATACCTCACTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAATCACAAATTAATCGTTaGCTTCACCAGCTGGTAAAT +
Preference number: 3 (lower is better)
Translates to: QLSTKLPAETWALLALVESQINR*LHQLVN
Trigger: ATTTACCAGCTGGTGAAGCAAACGATTAATTTGTGA...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 3 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 3 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQSFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR-3UTR CAA 90 bp ATCTTCCACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 3 (lower is better)
Translates to: IFHSHTVLSKDSQQRIISKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...AGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTGGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR TCA 72 bp TTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTaGGTCTTCCCTGGTTTACCAGTATGCAGTCTAGAC +
Preference number: 3 (lower is better)
Translates to: FTKECMRMHMQF*VFPGLPVCSLD
Trigger: GTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGCATCCTCATGCATTCCTTTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp TGGCCTGTTACACATACTTATCGCTGGGAGGTACAATaGGTGTCCAGTTATTTTAGTACTGGTGGTCTTTAC +
Preference number: 3 (lower is better)
Translates to: WPVTHTYRWEVQ*VSSYFSTGGLY
Trigger: GTAAAGACCACCAGTACTAAAATAACTGGACACTCATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp GAGAAGCTGAGGTTAATGAATGAGATTGATCAGGAGTaGGGTATCAAAGGGATATTGTCATTCTCTGGAGGG +
Preference number: 3 (lower is better)
Translates to: EKLRLMNEIDQE*GIKGILSFSGG
Trigger: CCCTCCAGAGAATGACAATATCCCTTTGATACCTCACTCCTGATCAATCTCATTCATTAACCTCAGCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp CTTCCCGCTTTACATCCAGAACTCTATGATTCTAGTTaGAGAGAATGGAATCAGGATCTTGGTTCGCCATCT +
Preference number: 3 (lower is better)
Translates to: LPALHPELYDSS*REWNQDLGSPS
Trigger: AGATGGCGAACCAAGATCCTGATTCCATTCTCTTCAACTAGAATCATAGAGTTCTGGATGTAAAGCGGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
3UTR GCA 72 bp AATTCACGGCAAAGTCCTTGTCTACCAGCTAACAAATaGCACCTGGAAAATTACCGTTTTTGCAGACAAGGA +
Preference number: 3 (lower is better)
Translates to: NSRQSPCLPANK*HLENYRFCRQG
Trigger: TCCTTGTCTGCAAAAACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAGACAAGGACTTTGCCGTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp CAGTTTATAAATGCCAGAACATATGTTGTAGGGGTGTaGGATGGCTTTCCTTCCACCATCTTACACCATTCA +
Preference number: 3 (lower is better)
Translates to: QFINARTYVVGV*DGFPSTILHHS
Trigger: TGAATGGTGTAAGATGGTGGAAGGAAAGCCATCCCACACCCCTACAACATATGTTCTGGCATTTATAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTACTGGCTGTATTTGTaGCTTAAGCATGTCCAACTG +
Preference number: 3 (lower is better)
Translates to: ETWALLALVEATFWMPSYYWLYL*LKHVQL
Trigger: CAGTTGGACATGCTTAAGCAACAAATACAGCCAGTA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp CTTGAATATATTTGGAAGCATCCCAAGCCTAATTCATaGTCATGGGGACAACACACTGGCCTGTTACACATA +
Preference number: 3 (lower is better)
Translates to: LEYIWKHPKPNS*SWGQHTGLLHI
Trigger: TATGTGTAACAGGCCAGTGTGTTGTCCCCATGATCATGAATTAGGCTTGGGATGCTTCCAAATATATTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp CCTGTGCATATACCTTCTTTTAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAACCAGCTAACGAACCT +
Preference number: 3 (lower is better)
Translates to: PVHIPSFKSVIQ*AEMSIKPANEP
Trigger: AGGTTCGTTAGCTGGTTTGATAGACATCTCTGCTCATTGGATGACAGACTTAAAAGAAGGTATATGCACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CCA 72 bp ATGTGTTTTGGGTACCCAGTTAATACAACATATCCATaGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAC +
Preference number: 3 (lower is better)
Translates to: MCFGYPVNTTYP*SVMSFPLYIQN
Trigger: GTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAAACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR CCA 72 bp TTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTTTTCAGTGATTGCATA +
Preference number: 3 (lower is better)
Translates to: FVGFLQVIGQDG*NFSCIVFSDCI
Trigger: TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR-3UTR CAA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTCTTTCTTGGGTGATTaGGCAAAATTAGACTACACC +
Preference number: 3 (lower is better)
Translates to: ETWALLALVEATFWMPSYSFLGD*AKLDYT
Trigger: GGTGTAGTCTAATTTTGCCAAATCACCCAAGAAAGA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCAGGCACCTTTTCAATaGGATACAAGCACCTTTGGT +
Preference number: 3 (lower is better)
Translates to: MATSYSYLENPNSVETLIQAPFQ*DTSTFG
Trigger: ACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR GCA 72 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGCATATTGGCTAACTAC +
Preference number: 3 (lower is better)
Translates to: LQVIGQDGWNFS*IVFSDCILANY
Trigger: GTAGTTAGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR CCA 72 bp TATAAATGCCAGAACATATGTTGTAGGGGTGTGGGATaGCTTTCCTTCCACCATCTTACACCATTCAAATAT +
Preference number: 3 (lower is better)
Translates to: YKCQNICCRGVG*LSFHHLTPFKY
Trigger: ATATTTGAATGGTGTAAGATGGTGGAAGGAAAGCCATCCCACACCCCTACAACATATGTTCTGGCATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTGGAAAATTACCGTTTTaGCAGACAAGGAGAAAGCTC +
Preference number: 3 (lower is better)
Translates to: MATSYSYLENPNSVETLIGKLPF*QTRRKL
Trigger: GAGCTTTCTCCTTGTCTGCAAAAACGGTAATTTTCC...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACTATACTGGCTGTATTaGTTGCTTAAGCATGTCCAA +
Preference number: 3 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSLYWLY*LLKHVQ
Trigger: TTGGACATGCTTAAGCAACAAATACAGCCAGTATAG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR TCA 72 bp TGCAAACTCCACACGTCATATACTTTCTTTCTTGGGTaGTTTGGCAAAATTAGACTACACCATGGAAAAACC +
Preference number: 3 (lower is better)
Translates to: CKLHTSYTFFLG*FGKIRLHHGKT
Trigger: GGTTTTTCCATGGTGTAGTCTAATTTTGCCAAATCACCCAAGAAAGAAAGTATATGACGTGTGGAGTTTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CCA 72 bp TTACTTTTACAAATCTATAGACTCTCGTTCCTTTTATaGCTGGATGGCTACCAGCTACTCTTACTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: LLLQIYRLSFLL*LDGYQLLLLGK
Trigger: TTTTCCAAGTAAGAGTAGCTGGTAGCCATCCAGCCATAAAAGGAACGAGAGTCTATAGATTTGTAAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR-3UTR CAA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCAAGAAAGAGGAGAGCATaGGAATATGTTTCTAACCAA +
Preference number: 3 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSRKRRA*EYVSNQ
Trigger: TTGGTTAGAAACATATTCCAATGCTCTCCTCTTTCT...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp GTAGTCCCACCTACTTGGGAGACTGAGGCAGGGGAATaGCTTGGACCCGGGAGGCAGGAGGCAGAGGTTACA +
Preference number: 4 (lower is better)
Translates to: VVPPTWETEAGE*LGPGRQEAEVT
Trigger: TGTAACCTCTGCCTCCTGCCTCCCGGGTCCAAGCAATTCCCCTGCCTCAGTCTCCCAAGTAGGTGGGACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGGCGCGCGGCTCATGTaGCAGGGCGCCTCGCGAGTA +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLAGARLM*QGASRV
Trigger: TACTCGCGAGGCGCCCTGTCACATGAGCCGCGCGCC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376091.8
CDS-3UTR TCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTCAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCAAAGGCTACAGATACACCAGCTGCTGCTGCAGCCGACAAGACCTCTCTGCGACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: SKGYRYTSCCCSRQDLSATCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...CGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGACTCCACAGCTGGGCTaGGCCAGGATGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALTPQLG*ARMLWP
Trigger: TGGCCACAGCATCCTGGCTCAGCCCAGCTGTGGAGT...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTGAAACGGTTCTCATGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PAGLSGSSPPLLVLKRFSCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...TGAGAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATGGCAGGGGAATTGCTTaGACCCGGGAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNGRGIA*TREAGG
Trigger: GCCTCCTGCCTCCCGGGTCCAAGCAATTCCCCTGCC...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTGGGAAGCCAGACTACACCAGCTATTaGAGACGGTCCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: RTKPTSLWDSRDTTTGKPDYTSY*RRSIPG
Trigger: ACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTC...TGGCTTCCCAGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGGACACCAAGTTGAGTaGGCGCCCCACGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGGHQVE*APHVAG
Trigger: GCCGGCTACGTGGGGCGCTCACTCAACTTGGTGTCC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGGGACACCAAGTTGAGTaGGCGCCCCACGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLGHQVE*APHVAG
Trigger: GCCGGCTACGTGGGGCGCTCACTCAACTTGGTGTCC...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTGCTGGGGTCACAGGCTaGGTTTCCCAGAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAAGVTG*VSQSLS
Trigger: TGAGAGGCTCTGGGAAACTCAGCCTGTGACCCCAGC...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: LSLPTPGNVCADKQCSPQYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...CTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR GCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTTACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LSLPTPGNVCADKQCSPQHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...CTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTTACACCAGCTGCTGCTaGAGCCGACAAGACAGTGAT +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTYTSCC*SRQDSD
Trigger: ATCACTGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR GCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTAGATACACCAGCTGCTaGTGCAGCCGACAAGACAGT +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTRYTSC*CSRQDS
Trigger: ACTGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATGCGCTCGGTCGGCTCTaGCGTCCAGGACACCAAGTT +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNALGRL*RPGHQV
Trigger: AACTTGGTGTCCTGGACGCCAGAGCCGACCGAGCGC...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GTAGACTCCCACGCCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTATCCATAGCGGTTGCTaGAATGTCCATCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: VDSHASRSVRQFTPFACVIHSGC*NVHQVF
Trigger: GAAGACCTGATGGACATTCCAGCAACCGCTATGGAT...AACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGGCGTGGGAGTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTGGCAGGGGAATTGCTTaGACCCGGGAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGGRGIA*TREAGG
Trigger: GCCTCCTGCCTCCCGGGTCCAAGCAATTCCCCTGCC...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCCAAAGGCTACAGATACACCAGCTGCTGCTGCAGCCGACAAGACCTCTCTGCGGTACGACTTGTCCTCTaGAGTAGAAATGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SKGYRYTSCCCSRQDLSAVRLVL*SRNGWS
Trigger: GCTCCAGCCATTTCTACTCCAGAGGACAAGTCGTAC...CGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CAA 72 bp TTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTaGGCTCTGATCCAGTGCAGGGGACCCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FPASSELMGGLH*ALIQCRGPSSS
Trigger: TGAGGAACTGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GCSEALEWVECMVAMEENHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGCGGGGCAGCTTCCACTaGCGTTATCGCACGGGCACA +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLRGSFH*RYRTGT
Trigger: TGTGCCCGTGCGATAACGTCAGTGGAAGCTGCCCCG...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGCTAGAGGGCCCTCTTTaGCCAGGCTCAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALLEGPL*PGSSQM
Trigger: CATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAG...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GGTCTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCATACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: GLSLPTPGNVCADKQCSPYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...TGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: GCSEALEWVECMVAMEENSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCCCCACAGACCACCAAATATGCCCAGCAGAATGAATGGCACGAGCTCAAAGAGTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SPQTTKYAQQNEWHELKECGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...CTCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATATTTGGTGGTCTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCAGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GLSLPTPGNVCADKQCSPGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...TGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCAAAGGCTACAGATACACCAGCTGCTGCTGCAGCCGACAAGACCTCTCTGCGAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: SKGYRYTSCCCSRQDLSASVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...CGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CAA 72 bp AGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTaGCATTTGGCTCTGATCCAGTGCAGGGGACCCAGT +
Preference number: 4 (lower is better)
Translates to: RCFPASSELMGG*HLALIQCRGPS
Trigger: ACTGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp ATGGCTGTCACGACGAGTACCTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTTCGCTTCCGACACCAG +
Preference number: 4 (lower is better)
Translates to: MAVTTSTSITGY*PNWVVFRFRHQ
Trigger: CTGGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGAGGTACTCGTCGTGACAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATCTCTTACCCCGGCAGTaGAATCTCACTGCCGTAGGC +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNLLPRQ*NLTAVG
Trigger: GCCTACGGCAGTGAGATTTCACTGCCGGGGTAAGAG...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCACTCCACAGCTGGGCTaGGCCAGGATGCTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCTPQLG*ARMLWP
Trigger: TGGCCACAGCATCCTGGCTCAGCCCAGCTGTGGAGT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGCTAGAGGGCCCTCTTTaGCCAGGCTCAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGLEGPL*PGSSQM
Trigger: CATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAG...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AGGCTACAGATACACCAGCTGCTGCTGCAGCCGACAAGACCTCTCTGCGCTTGGGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: RLQIHQLLLQPTRPLCAWEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...CCAAGCGCAGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: LSLPTPGNVCADKQCSPQSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...CTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAACCTCTACTCCACAGCTaGGCTGAGCCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEPLLHS*AEPGCC
Trigger: ACAGCATCCTGGCTCAGCCCAGCTGTGGAGTAGAGG...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTCAAATAGTGGCCCATaGGCCGGAACCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLSNSGP*AGTQPL
Trigger: GAGGGGCTGGGTTCCGGCCCATGGGCCACTATTTGA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCACTGCCGCAGTCCCAGTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: NDSKQSPVVCNQALPQSQSSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...CTGGGACTGCGGCAGTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTCCAGGACACCAAGTTaGGTGAGCGCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHSRTPS*VSAPRS
Trigger: GCTACGTGGGGCGCTCACTCAACTTGGTGTCCTGGA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGCTGGGGTCACAGGCTaGGTTTCCCAGAGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHAGVTG*VSQSLS
Trigger: TGAGAGGCTCTGGGAAACTCAGCCTGTGACCCCAGC...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGCTTGCATTTGGCTCTaGTCCAGTGCAGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGACIWL*SSAGDP
Trigger: TGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTACCTACTTGGGAGACTaGGGCAGGGGAATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLATYLGD*GRGIAW
Trigger: CCAAGCAATTCCCCTGCCTCAGTCTCCCAAGTAGGT...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAACTGTCCCCCTTAGCTaGCGTGAGCAAGGTACTGAC +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVETVPLS*REQGTD
Trigger: GTCAGTACCTTGCTCACGTCAGCTAAGGGGGACAGT...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GTAGACTCCCACGCCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTAGACAGGAGTTGATGTaGAATGGGAAAGGATTTATG +
Preference number: 4 (lower is better)
Translates to: VDSHASRSVRQFTPFACVRQELM*NGKGFM
Trigger: CATAAATCCTTTCCCATTGCACATCAACTCCTGTCT...AACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGGCGTGGGAGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR GCA 90 bp GGGTTTCATCACATCCATTGCCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTCCAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GFHHIHCQGLMSKLFFGFQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...GAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLAHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTGGGCTGAGCCAGGATaGTGTGGCCAGAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGWAEPG*CGQRKR
Trigger: CCTCTTTCTCTGGCCACAGCATCCTGGCTCAGCCCA...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAATTGGCTCTGATCCAGTaGAGGGGACCCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVELALIQ*RGPSSS
Trigger: TGAGGAACTGGGTCCCCTGCACTGGATCAGAGCCAA...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTGGAGTAGAAATGGCTGGCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RTYSSTIVRLVLWSRNGWPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...CCAGCCATTTCTACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp AATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCACTGCCGCAGTCCCAGTGGCTTTCCTTTCTCTaGTTTGAAAAGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: NDSKQSPVVCNQALPQSQWLSFL*FEKQSP
Trigger: GGGGCTTTGCTTTTCAAACCAGAGAAAGGAAAGCCA...CTGGGACTGCGGCAGTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CCA 90 bp GTAGACTCCCACGCCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTTTAATACATTCTTTTTaGTTCCAAAAGGCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VDSHASRSVRQFTPFACVLIHSF*FQKAGP
Trigger: AGGGCCCGCCTTTTGGAACCAAAAAGAATGTATTAA...AACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGGCGTGGGAGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTCCAGGACACCAAGTTaGGTGAGCGCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMSRTPS*VSAPRS
Trigger: GCTACGTGGGGCGCTCACTCAACTTGGTGTCCTGGA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTTTTCCTGCTTCCTCTaGACTGATGGGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAFSCFL*TDGWLA
Trigger: TGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTACCTACTTGGGAGACTaGGGCAGGGGAATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGTYLGD*GRGIAW
Trigger: CCAAGCAATTCCCCTGCCTCAGTCTCCCAAGTAGGT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTAGAGGGCCCTCTTTaGCCAGGCTCAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLLEGPL*PGSSQM
Trigger: CATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTGGAGTAGAAATGGCTGGCCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: RTYSSTIVRLVLWSRNGWPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...CCAGCCATTTCTACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETACADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AATGCTGCCACCAAGGCAGCAAAGAATGAACGCCACAATGTTTTGAGGGGAAAACCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NAATKAAKNERHNVLRGKPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...TTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTTGGCTCTGATCCAGTaGAGGGGACCCAGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGLALIQ*RGPSSS
Trigger: TGAGGAACTGGGTCCCCTGCACTGGATCAGAGCCAA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCAGTGAGCCGAGATTGTaGCACTGCACTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTSEPRL*HCTPTW
Trigger: CCAGGTGGGAGTGCAGTGGCACAATCTCGGCTCACT...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAACCCTACACCAGGGATTaGCTCCTCCAAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEPYTRD*LLQEVH
Trigger: ATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: LSLPTPGNVCADKQCSPQVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...CTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGTCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GCSEALEWVECMVAMEENHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGGTTTCATCACATCCATTGCCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTCAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: GFHHIHCQGLMSKLFFGFKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...GAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GCSEALEWVECMVAMEENSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGCGCTCGGTCGGCTCTaGCGTCCAGGACACCAAGTT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQALGRL*RPGHQV
Trigger: AACTTGGTGTCCTGGACGCCAGAGCCGACCGAGCGC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAGGATACAAGCACCTTTaGTGTCACCAGGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEGYKHL*CHQALS
Trigger: GGACAAGGCCTGGTGACACCAAAGGTGCTTGTATCC...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATCATCCAGTGTGGAAATaGAGGCATGGCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNHPVWK*RHGSSN
Trigger: GTTGCTGCTGCCATGCCTCCATTTCCACACTGGATG...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTATGTTGTAGGGGTGTaGGATGGCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAYVVGV*DGFPST
Trigger: GGTGGAAGGAAAGCCATCCCACACCCCTACAACATA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAGGAGCAAAGCCCTGTTaGTCCCATCAACTCAGACGT +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEGAKPC*SHQLRR
Trigger: ACGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCC...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTGGAGTAGAAATGGCTGGGCCACTTTGGCACTTTaGCAGACAGTTTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: RTYSSTIVRLVLWSRNGWATLAL*QTVWWH
Trigger: GTGCCACCAAACTGTCTGCCAAAGTGCCAAAGTGGC...CCAGCCATTTCTACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATAGGCTGAGTGTGGACTaGCGTGAGTACAAGAAACTC +
Preference number: 4 (lower is better)
Translates to: GCSEALEWVECMVAMEENRLSVD*REYKKL
Trigger: GAGTTTCTTGTACTCACGCCAGTCCACACTCAGCCT...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CAA 72 bp TCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTaGTCCATACCCCTGTGTCTTAGGATGGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SIGYKHLWCHQA*SIPLCLRMALH
Trigger: ATGCAGAGCCATCCTAAGACACAGGGGTATGGACAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp AAGACCTCTCTGCGCTTGGCTTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGGATGTTCCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: KTSLRLASFFLY*LKQWHRMFPQQ
Trigger: CTGCTGTGGGAACATCCTGTGCCACTGCTTCAACAAATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 4 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACGGGGCAGCTTCCACTaGCGTTATCGCACGGGCACA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIRGSFH*RYRTGT
Trigger: TGTGCCCGTGCGATAACGTCAGTGGAAGCTGCCCCG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTCCCAAGCCTAATTCATaGTCATGGGGACAACACACT +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAPKPNS*SWGQHT
Trigger: AGTGTGTTGTCCCCATGATCATGAATTAGGCTTGGG...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTGGGAATATGCAGAATaGCCGCTGATTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGWEYAE*PLILGW
Trigger: CCAGCCCAGAATCAGCGGTCATTCTGCATATTCCCA...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCTGCTTCCTCTGAACTaGTGGGTGGCTTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGLLPLN*WVACIW
Trigger: CCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCCCCACAGACCACCAAATATGCCCAGCAGAATGAATGGCACGAGCTCAAAGAGACCAAGTTCTCACAGTaGAGATCTAAGAATCCCTCC +
Preference number: 4 (lower is better)
Translates to: SPQTTKYAQQNEWHELKETKFSQ*RSKNPS
Trigger: GGAGGGATTCTTAGATCTTCACTGTGAGAACTTGGT...CTCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATATTTGGTGGTCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR GCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTTGGTAATCTCTCGGTaGCTATCCCGGTCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLLVISR*LSRSRD
Trigger: GTCTCGAGACCGGGATAGGCACCGAGAGATTACCAA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCTAGAGGGCCCTCTTTaGCCAGGCTCAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLLEGPL*PGSSQM
Trigger: CATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCTAGAGGGCCCTCTTTaGCCAGGCTCAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQLEGPL*PGSSQM
Trigger: CATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGATACACCAGCTGCTaGTGCAGCCGACAAGACCTC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHRYTSC*CSRQDL
Trigger: GAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLACADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTGGGAAGCCAGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: RTKPTSLWDSRDTTTGKPGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...TGGCTTCCCAGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTGCAGTGAAATCTCACTaGCGTAGGCATCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGAVKSH*RRHPVW
Trigger: CCACACTGGATGCCTACGGCAGTGAGATTTCACTGC...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTCAGCACCAAACTTCCTaGGGAAACTTGGGCTCTATT +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAQHQTS*GNLGSI
Trigger: AATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTG...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGACTCAGATAAACAACTaGTCTGGACAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALTQINN*SGQLST
Trigger: GGTGCTGAGCTGTCCAGAGCAGTTGTTTATCTGAGT...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCTCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACTACACCAGCTATTGAAGACGGTCCATTCCTGGTGGTAATAAGCCAGCTGTTCAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: TTPAIEDGPFLVVISQLFSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...GAACAGCTGGCTTATTACCACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCACTGCCGCAGTCCCAGATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: NDSKQSPVVCNQALPQSQIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...CTGGGACTGCGGCAGTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGAGCCTCTGTTATCCATaGCACCCTGCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLSLCYP*HPATWP
Trigger: TGGCCATGTGGCAGGGTGCCATGGATAACAGAGGCT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTGGATACAAGCACCTTTaGTGTCACCAGGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGGYKHL*CHQALS
Trigger: GGACAAGGCCTGGTGACACCAAAGGTGCTTGTATCC...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGCTGTGTGTCACCTCTaGTCCATGTGTTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLAAVCHL*SMCCET
Trigger: AGTCTCACAACACATGGACCAGAGGTGACACACAGC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATAGCAACTGGGCCACATaGCAAAGGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNSNWAT*QRKWLC
Trigger: ACACAGCCATTTCCTTTGCCATGTGGCCCAGTTGCT...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCGTAGGCATCCAGTGTaGAAATGGAGGCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCRRHPV*KWRHGS
Trigger: GCTGCCATGCCTCCATTTCCACACTGGATGCCTACG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGCCGCTGATTCTGGGCTaGAAGGATGATGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLPLILG*KDDEKC
Trigger: GCACTTCTCATCATCCTTCCAGCCCAGAATCAGCGG...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGCGTTCCTTTTATGGCTaGATGGCTACCAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALRSFYG*MATSYS
Trigger: AGAGTAGCTGGTAGCCATCCAGCCATAAAAGGAACG...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCCATGAGCAGATGTCTTaGGTCGGCCCTATCCATAAA +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSHEQMS*VGPIHK
Trigger: TTTATGGATAGGGCCGACCCAAGACATCTGCTCATG...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTCAAATAGTGGCCCATaGGCCGGAACCCAGCCCCTC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDSNSGP*AGTQPL
Trigger: GAGGGGCTGGGTTCCGGCCCATGGGCCACTATTTGA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCTCTTCGGAGGACAAAGCCCACAAGTCTTTGGGACTCCCGGGATACCACCACTCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SLRRTKPTSLWDSRDTTTPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...AGTGGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTTGTCCTCCGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCCATGGGTGTAAGGTCAGTCACAGTGAAGGGGCTGAGATCGAGGATGTTCCGAAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: SMGVRSVTVKGLRSRMFRKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...TCGGAACATCCTCGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCTGATAAAAGCCCAATAAGGAGCATCAACAACCAGCCGGAAAAAGCATCACTCCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PDKSPIRSINNQPEKASLLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...GAGTGATGCTTTTTCCGGCTGGTTGTTGATGCTCCTTATTGGGCTTTTATCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGACTACACCAGCTATTaGAGACGGTCCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGDYTSY*RRSIPG
Trigger: ACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGGACTACACCAGCTATTaGAGACGGTCCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQDYTSY*RRSIPG
Trigger: ACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTC...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCATAAAGGCCGGGGGTaGTGCAATCAGCTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDHKGRG*CNQLPD
Trigger: GTCAGGGAGCTGATTGCATCACCCCCGGCCTTTATG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACAGACCTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: SLPTPGNVCADKQCSPQTCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...GGTCTGTGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCACTGCCGCAGTCCCAGTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: NDSKQSPVVCNQALPQSQCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...CTGGGACTGCGGCAGTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAGGAACTCCAGGCAACTaGTTTGCTCTGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLGTPGN*FALSPR
Trigger: CCTCGGCGACAGAGCAAATCAGTTGCCTGGAGTTCC...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTCGCTGGGAGGTACAATaGGTGTCCAGTTATTTTAGT +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETARWEVQ*VSSYFS
Trigger: ACTAAAATAACTGGACACTCATTGTACCTCCCAGCG...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATATGCAGAATGACCGCTaGTTCTGGGCTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHMQNDR*FWAGRM
Trigger: CATCCTTCCAGCCCAGAATCAGCGGTCATTCTGCAT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTACACAAAAGCAAACTTaGGACACCCTCCTTATCGCT +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETATQKQT*DTLLIA
Trigger: AGCGATAAGGAGGGTGTCTCAAGTTTGCTTTTGTGT...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGCTTGCATTTGGCTCTaGTCCAGTGCAGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQACIWL*SSAGDP
Trigger: TGGGTCCCCTGCACTGGATCAGAGCCAAATGCAAGC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTGCTTCCTCTGAACTaGTGGGTGGCTTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLLPLN*WVACIW
Trigger: CCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCACAGCTACTGAGCTCTaGTCTGAGGAACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSTATEL*SEELLL
Trigger: AAGTAAGAGTTCCTCAGATCAGAGCTCAGTAGCTGT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTCAAGCAACTGAAATATaGAACAGAGCAGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAQATEI*NRAESA
Trigger: CGCTGACTCTGCTCTGTTTCATATTTCAGTTGCTTG...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGAATTCAGCGCATGGTaGGGGGAGAGAAAGACAATG +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGEFSAW*GERKTM
Trigger: CATTGTCTTTCTCTCCCCTCACCATGCGCTGAATTC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTACTGTCCCCCTTAGCTaGCGTGAGCAAGGTACTGAC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLTVPLS*REQGTD
Trigger: GTCAGTACCTTGCTCACGTCAGCTAAGGGGGACAGT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCGGAACCCAGCCCCTCTaGTCTTCCTGGCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFGTQPL*SSWPHW
Trigger: CCAATGAGGCCAGGAAGATCAGAGGGGCTGGGTTCC...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGGACATTAGCTTCAGCTaGACTTTCACCAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALDISFS*TFTNSQ
Trigger: CTGAGAGTTGGTGAAAGTTCAGCTGAAGCTAATGTC...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAGATACACCAGCTGCTaGTGCAGCCGACAAGACCTC +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQRYTSC*CSRQDL
Trigger: GAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAGATACACCAGCTGCTaGTGCAGCCGACAAGACCTC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMRYTSC*CSRQDL
Trigger: GAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGATACACCAGCTGCTaGTGCAGCCGACAAGACCTC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLRYTSC*CSRQDL
Trigger: GAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQCADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCTTGCTTGTCATGGCTaGAGCCATCAGAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLACHG*SHQRHD
Trigger: ATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTTGCTTGTCATGGCTaGAGCCATCAGAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLACHG*SHQRHD
Trigger: ATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGTTATCCATGGCACCCTaGCACATGGCCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLLSMAP*HMAILI
Trigger: GATCAAGATGGCCATGTGGCAGGGTGCCATGGATAA...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGAGTGAGCCGAGATTGTaGCACTGCACTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQSEPRL*HCTPTW
Trigger: CCAGGTGGGAGTGCAGTGGCACAATCTCGGCTCACT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTACTCAGATAAACAACTaGTCTGGACAGCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLATQINN*SGQLST
Trigger: GGTGCTGAGCTGTCCAGAGCAGTTGTTTATCTGAGT...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCTGTGTCCTACTCCATaGCCAATAACCTCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLCPTP*PITSLR
Trigger: GCGCAGAGAGGTTATTGGGCATGGAGTAGGACACAG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCATGGGTGTAAGGTCAGTCACAGTGAAGGGGCTGAGATCGAGGATGTTCCGAATTCAGAGGTTTCTGTaGTGTAGGCACAAAATGATG +
Preference number: 4 (lower is better)
Translates to: SMGVRSVTVKGLRSRMFRIQRFL*CRHKMM
Trigger: CATCATTTTGTGCCTACACCACAGAAACCTCTGAAT...TCGGAACATCCTCGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCCCTACACCAGGGATTaGCTCCTCCAAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDPYTRD*LLQEVH
Trigger: ATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQTCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMTCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AATGCTGCCACCAAGGCAGCAAAGAATGAACGCCACAATGTTTTGAGGGGAAAATCCGAGTGTATTCATTaGGGAAAGCCAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: NAATKAAKNERHNVLRGKSECIH*GKPGWQ
Trigger: CTGCCATCCTGGCTTTCCCCAATGAATACACTCGGA...TTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CCAGCAACAATGTTCATGGTTAAACCAGAATCCCCCTGTGCATATACCTTCTTTAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: PATMFMVKPESPCAYTFFKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...AAAGAAGGTATATGCACAGGGGGATTCTGGTTTAACCATGAACATTGTTGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCATGGGTGTAAGGTCAGTCACAGTGAAGGGGCTGAGATCGAGGATGTTCCGAAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SMGVRSVTVKGLRSRMFRNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...TCGGAACATCCTCGATCTCAGCCCCTTCACTGTGACTGACCTTACACCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTGGCTTTCCTTTCTCTaGTTTGAAAAGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAWLSFL*FEKQSP
Trigger: GGGGCTTTGCTTTTCAAACCAGAGAAAGGAAAGCCA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAGCCTCTGTTATCCATaGCACCCTGCCACATGGCCA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILASLCYP*HPATWP
Trigger: TGGCCATGTGGCAGGGTGCCATGGATAACAGAGGCT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGCATGGAGGTGGCATCTaGGTAAGAGAATTAGTTAGG +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALHGGGI*VRELVR
Trigger: CCTAACTAATTCTCTTACCCAGATGCCACCTCCATG...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCGTTCTGAGTCTTCCCTaGTTTACCAGTATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSVLSLP*FTSMQS
Trigger: AGACTGCATACTGGTAAACCAGGGAAGACTCAGAAC...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCCTCTACTCCACAGCTaGGCTGAGCCAGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDPLLHS*AEPGCC
Trigger: ACAGCATCCTGGCTCAGCCCAGCTGTGGAGTAGAGG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGTAGGGGTGTGGGATaGCTTTCCTTCCACCATCTT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGCRGVG*LSFHHL
Trigger: AAGATGGTGGAAGGAAAGCCATCCCACACCCCTACA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGGGAGCAAAGCCCTGTTaGTCCCATCAACTCAGACGT +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLGAKPC*SHQLRR
Trigger: ACGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCC...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCAAGTATCAATGGCTTTaGCCCTCACAGAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSKYQWL*PSQRSK
Trigger: TTTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCCTTCCTGCGGAAACTTaGGCTCTATTAGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSLPAET*ALLALV
Trigger: AACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAG...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLASSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNSSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTGGAGTAGAAATGGCTGGCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: RTYSSTIVRLVLWSRNGWPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...CCAGCCATTTCTACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCGACTACACCAGCTATTaGAGACGGTCCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCDYTSY*RRSIPG
Trigger: ACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTC...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCGGAACTCCAGGCAACTaGTTTGCTCTGTCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFGTPGN*FALSPR
Trigger: CCTCGGCGACAGAGCAAATCAGTTGCCTGGAGTTCC...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCCCAAGCCTAATTCATaGTCATGGGGACAACACACT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGPKPNS*SWGQHT
Trigger: AGTGTGTTGTCCCCATGATCATGAATTAGGCTTGGG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTAAACCAGACTGCCCTTaGGCCAAACACTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGKPDCP*AKHCFE
Trigger: TTCAAAGCAGTGTTTGGCTCAAGGGCAGTCTGGTTT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATTTCATATGTCTGCCTTaGGATGCTAAAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNFICLP*DAKALI
Trigger: GATGAGGGCTTTAGCATCTCAAGGCAGACATATGAA...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTGGCCTTGGTCAAATaGAGAAGAGTCACCCACATG +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLALVK*RRVTHM
Trigger: CATGTGGGTGACTCTTCTTCATTTGACCAAGGCCAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCAGGAACCCAGCCCCTCTaGTCTTCCTGGCCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSGTQPL*SSWPHW
Trigger: CCAATGAGGCCAGGAAGATCAGAGGGGCTGGGTTCC...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACTAGAGGGCCCTCTTTaGCCAGGCTCAAGCCAGATG +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCILEGPL*PGSSQM
Trigger: CATCTGGCTTGAGCCTGGGCAAAGAGGGCCCTCTAG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGCAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNCADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCISQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCAGCCAGCTGCCACATTaGACTGTAGACTCCCACGCC +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFSQLPH*TVDSHA
Trigger: GGCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCTTGCTTGTCATGGCTaGAGCCATCAGAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLLACHG*SHQRHD
Trigger: ATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCATCTGCCACCCACTTaGTTGTCATGGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDHLPPT*LSWLQP
Trigger: TGGCTGCAGCCATGACAAGCAAGTGGGTGGCAGATG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTTATCCATGGCACCCTaGCACATGGCCATCTTGATC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHLSMAP*HMAILI
Trigger: GATCAAGATGGCCATGTGGCAGGGTGCCATGGATAA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTGAAATCCATAGCGGTTaGTGGAATGTCCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGEIHSG*WNVHQV
Trigger: GACCTGATGGACATTCCAGCAACCGCTATGGATTTC...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTTGGAGGGGGAGTAATTaGACACAGGTAAAACTACAG +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLAWRGSN*TQVKLQ
Trigger: CTGTAGTTTTACCTGTGTGCAATTACTCCCCCTCCA...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATGGGCTGAGCCAGGATaGTGTGGCCAGAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIWAEPG*CGQRKR
Trigger: CCTCTTTCTCTGGCCACAGCATCCTGGCTCAGCCCA...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTCTGGTTCAGGCTATaGCTAGGAACAGGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLWFRL*LGTGEN
Trigger: ATTCTCGCCTGTTCCTAGGCATAGCCTGAACCAGAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDTCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTCCGAGTGTATTCATTaGGGAAAGCCAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCSECIH*GKPGWQ
Trigger: CTGCCATCCTGGCTTTCCCCAATGAATACACTCGGA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGAAGCCCACAAGTCTTTaGGACTCCCGGGATACCACC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQKPTSL*DSRDTT
Trigger: GGTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTATCTTCACCCACGCTaGGGTCACAGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMYLHPR*GHRLSF
Trigger: GAAACTCAGCCTGTGACCCCAGCGTGGGTGAAGATA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGTCAGGTCTTCATCACTaGAGCTGTTCTGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQSGLHH*SCSGSY
Trigger: GTAGCTTCCAGAACAGCTCCAGTGATGAAGACCTGA...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAACATGGAGGTGGCATCTaGGTAAGAGAATTAGTTAGG +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEHGGGI*VRELVR
Trigger: CCTAACTAATTCTCTTACCCAGATGCCACCTCCATG...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGTGGAAATGGAGGCATaGCAGCAGCAACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILVEMEA*QQQLGH
Trigger: GTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCAC...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCATGAGCAGATGTCTTaGGTCGGCCCTATCCATAAA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGHEQMS*VGPIHK
Trigger: TTTATGGATAGGGCCGACCCAAGACATCTGCTCATG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTTAGAAATGAGAATGTaGCCAGCAAACGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETALEMRM*PANVWG
Trigger: TCCCCAAACGTTTGCTGGCCACATTCTCATTTCTAA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGGCTGAAGGCCCTTTaGCAGGAACTAAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLRLKAL*QELRGR
Trigger: CCTACCTCTTAGTTCCTGCCAAAGGGCCTTCAGCCT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCTCTTCCTGGCCTCATTaGCTCACTCAACAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTSSWPH*LTQQVV
Trigger: TACCACCTGTTGAGTGAGCCAATGAGGCCAGGAAGA...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCTTTGGCTACTGCAGTTaGAGCCAGCCCTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTFGYCS*SQPYKE
Trigger: CTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAA...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTTGGCAGCCCGCATTTaGTCATTCAGGTTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLAARI*SFRLGS
Trigger: GCTCCCCAACCTGAATGACCAAATGCGGGCTGCCAA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CCA 90 bp GGTCTTTCGCTTCCGACACCAGGCAATGTTTGTGCGGATAAACAGTGCTCCCCACTGGCTCTATTAGAATaGCTAAAATCCAAAACACTG +
Preference number: 4 (lower is better)
Translates to: GLSLPTPGNVCADKQCSPLALLE*LKSKTL
Trigger: CAGTGTTTTGGATTTTAGCCATTCTAATAGAGCCAG...TGGGGAGCACTGTTTATCCGCACAAACATTGCCTGGTGTCGGAAGCGAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGTCCATGATCCTATTTaGAGAACCTATTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGVHDPI*RTYSST
Trigger: GGTGGAGGAATAGGTTCTTCAAATAGGATCATGGAC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAAGGCGCAAACACCTTaGCAAGAGATACGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMKAQTP*QEIRQG
Trigger: TCCTTGCCGTATCTCTTGTCAAGGTGTTTGCGCCTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGCAAGGCAGCAAAGAATaGACGCCACAATGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLQGSKE*TPQCFE
Trigger: CTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTG...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGGGTCTTCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: SQQRIISPGFHHIHCQGLPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...AAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGACTACACCAGCTATTaGAGACGGTCCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMDYTSY*RRSIPG
Trigger: ACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGGACTACACCAGCTATTaGAGACGGTCCATTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQDYTSY*RRSIPG
Trigger: ACCAGGAATGGACCGTCTTCAATAGCTGGTGTAGTC...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTAAAACTCCCCTGCTaGAAGCCTCTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLKLPC*KPLLSM
Trigger: CATGGATAACAGAGGCTTTCAGCAGGGGAGTTTTAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGAATTCTAAGGACTCTTaGGGGAGTCACAGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLNSKDS*GSHSCL
Trigger: TAGGCAGCTGTGACTCCCTCAAGAGTCCTTAGAATT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCAATTCTAAGGACTCTTaGGGGAGTCACAGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCNSKDS*GSHSCL
Trigger: TAGGCAGCTGTGACTCCCTCAAGAGTCCTTAGAATT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTATGGGAATATGCAGAATaGCCGCTGATTCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLWEYAE*PLILGW
Trigger: CCAGCCCAGAATCAGCGGTCATTCTGCATATTCCCA...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTACTGAGCCATTACTATaGTACAACATACCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: MAKEMAVCHLWSMCCETATEPLL*YNIPQK
Trigger: TTTCTGGGGTATGTTGTATCATAGTAATGGCTCAGT...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCACTGAGCCATTACTATaGTACAACATACCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSTEPLL*YNIPQK
Trigger: TTTCTGGGGTATGTTGTATCATAGTAATGGCTCAGT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATTCTATTAGCTTTGGTTaGAGCTACTTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNSISFG*SYFLDA
Trigger: GGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGA...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAACTATGTTGTTCCGCATaGCTAGGGAGTAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVELCCSA*LGSRIK
Trigger: CTTTATTCTACTCCCTAGTCATGCGGAACAACATAG...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTTGGTAATCTCTCGGTaGCTATCCCGGTCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQLVISR*LSRSRD
Trigger: GTCTCGAGACCGGGATAGGCACCGAGAGATTACCAA...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTTGGTAATCTCTCGGTaGCTATCCCGGTCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDLVISR*LSRSRD
Trigger: GTCTCGAGACCGGGATAGGCACCGAGAGATTACCAA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAATCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVESSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCACAGCAGCAAGCCACGTaGACTAGAGGGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSQQQAT*TRGPSL
Trigger: CAAAGAGGGCCCTCTAGTGCACGTGGCTTGCTGCTG...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR GCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTACACCAGCTGCTGCTaGAGCCGACAAGACCTCTCT +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFYTSCC*SRQDLS
Trigger: AGAGAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQCADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLCADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTGCAGCCCCAACCATTaGATAAAGGCCGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILCSPNH*IKAGGD
Trigger: ATCACCCCCGGCCTTTATGCAATGGTTGGGGCTGCA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCTTGCTTGTCATGGCTaGAGCCATCAGAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQLACHG*SHQRHD
Trigger: ATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTTGCTTGTCATGGCTaGAGCCATCAGAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLACHG*SHQRHD
Trigger: ATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGCCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTGTGGGCATCATAGATaGCCTCCCGCCCAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFCGHHR*PPAQEH
Trigger: ATGCTCTTGGGCGGGAGGGCATCTATGATGCCCACA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCGAAATCCATAGCGGTTaGTGGAATGTCCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCEIHSG*WNVHQV
Trigger: GACCTGATGGACATTCCAGCAACCGCTATGGATTTC...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR GCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCCTGGTTTACCAGTATaGAGTCTAGACTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDPGLPV*SLDLVP
Trigger: GGGAACCAAGTCTAGACTGCATACTGGTAAACCAGG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGCAGTGAAATCTCACTaGCGTAGGCATCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQAVKSH*RRHPVW
Trigger: CCACACTGGATGCCTACGGCAGTGAGATTTCACTGC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAGGGCCAATCGGTaGTTAGCATCTACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGWRANR*LASTKY
Trigger: ATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCTTTGAACCACTCATTTaGTTAGAAAGCCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSFEPLI*LESLAF
Trigger: AAAGGCCAGGCTTTCTAAGCAAATGAGTGGTTCAAA...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCAGCACCAAACTTCCTaGGGAAACTTGGGCTCTATT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCQHQTS*GNLGSI
Trigger: AATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGCCCCAGTCTGAAGTaGTTTAGAAGGGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSPSLK*FRRALA
Trigger: AGCAAGTGCCCTTCTAAAGCACTTCAGACTGGGGCT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCCCTACACCAGGGATTaGCTCCTCCAAGAAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDPYTRD*LLQEVH
Trigger: ATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTAGAAATGGCTGGAGCTGGTAGAAACACAAATGGCAACTTGAACAAGCTGCTGCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: VEMAGAGRNTNGNLNKLLLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...CAGCAGCTTGTTCAAGTTGCCATTTGTGTTTCTACCAGCTCCAGCCATTTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTTCCGAGTGTATTCATTaGGGAAAGCCAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILASECIH*GKPGWQ
Trigger: CTGCCATCCTGGCTTTCCCCAATGAATACACTCGGA...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTCCGAGTGTATTCATTaGGGAAAGCCAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYSECIH*GKPGWQ
Trigger: CTGCCATCCTGGCTTTCCCCAATGAATACACTCGGA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACCGGGATACCACCACTaGGAAGCCACTGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIPGYHH*EATVSG
Trigger: ACCACTTACAGTGGCTTCCCAGTGGTGGTATCCCGG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNSVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILASGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTGGCTTTCCTTTCTCTaGTTTGAAAAGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGWLSFL*FEKQSP
Trigger: GGGGCTTTGCTTTTCAAACCAGAGAAAGGAAAGCCA...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCAGGTACAACTTCACTaGGAACTCCAGGCAACTGAT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNQVQLH*ELQATD
Trigger: ATCAGTTGCCTGGAGTTCCCAGTGAAGTTGTACCTG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTATCTTCACCCACGCTaGGGTCACAGGCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDYLHPR*GHRLSF
Trigger: GAAACTCAGCCTGTGACCCCAGCGTGGGTGAAGATA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACTCACTGGAGCTGTTCTaGAAGCTACTAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDSLELF*KLLKLP
Trigger: GGGGAGTTTTAGTAGCTTCCAGAACAGCTCCAGTGA...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTCACTGGAGCTGTTCTaGAAGCTACTAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCSLELF*KLLKLP
Trigger: GGGGAGTTTTAGTAGCTTCCAGAACAGCTCCAGTGA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATATCCATAGCGGTTGCTaGAATGTCCATCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNIHSGC*NVHQVF
Trigger: GAAGACCTGATGGACATTCCAGCAACCGCTATGGAT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR CCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGCAACTGGGCCACATaGCAAAGGAAATGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTSNWAT*QRKWLC
Trigger: ACACAGCCATTTCCTTTGCCATGTGGCCCAGTTGCT...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCAGTGGAAATGGAGGCATaGCAGCAGCAACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSVEMEA*QQQLGH
Trigger: GTGGCCCAGTTGCTGCTGCCATGCCTCCATTTCCAC...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCATCCAGTGTGGAAATaGAGGCATGGCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDHPVWK*RHGSSN
Trigger: GTTGCTGCTGCCATGCCTCCATTTCCACACTGGATG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCCGTAGGCATCCAGTGTaGAAATGGAGGCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFRRHPV*KWRHGS
Trigger: GCTGCCATGCCTCCATTTCCACACTGGATGCCTACG...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCCGCTGATTCTGGGCTaGAAGGATGATGAGAAGTGC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQPLILG*KDDEKC
Trigger: GCACTTCTCATCATCCTTCCAGCCCAGAATCAGCGG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCGTTCCTTTTATGGCTaGATGGCTACCAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHRSFYG*MATSYS
Trigger: AGAGTAGCTGGTAGCCATCCAGCCATAAAAGGAACG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCGGAGGCCGAGATGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFGGRDG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCATCTCGGCCTCC...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAGGAGGCCGAGATGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIGGRDG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCATCTCGGCCTCC...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTTATGTTGTAGGGGTGTaGGATGGCTTTCCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAYVVGV*DGFPST
Trigger: GGTGGAAGGAAAGCCATCCCACACCCCTACAACATA...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAAGGCTGAAGGCCCTTTaGCAGGAACTAAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLRLKAL*QELRGR
Trigger: CCTACCTCTTAGTTCCTGCCAAAGGGCCTTCAGCCT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCACAGGAGGCTGGCCTTaGTCAAATGAAGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTTGGWP*SNEEES
Trigger: TGACTCTTCTTCATTTGACCAAGGCCAGCCTCCTGT...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGTAAGAACAGGAGGCTaGCCTTGGTCAAATGAAGAA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGVRTGG*PWSNEE
Trigger: TTCTTCATTTGACCAAGGCCAGCCTCCTGTTCTTAC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTCTTCCTGGCCTCATTaGCTCACTCAACAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYSSWPH*LTQQVV
Trigger: TACCACCTGTTGAGTGAGCCAATGAGGCCAGGAAGA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCAGACAGGTTTTCTTTaGCTACTGCAGTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLQTGFL*LLQLEP
Trigger: TGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCAGACAGGTTTTCTTTaGCTACTGCAGTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNQTGFL*LLQLEP
Trigger: TGGCTCCAACTGCAGTAGCCAAAGAAAACCTGTCTG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp ACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTaGGTTGAAGCTACTTTCTGGATGCCTAGTTACTGC +
Preference number: 4 (lower is better)
Translates to: TKLPAETWALLA*VEATFWMPSYC
Trigger: GCAGTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGTCCATGATCCTATTTaGAGAACCTATTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNVHDPI*RTYSST
Trigger: GGTGGAGGAATAGGTTCTTCAAATAGGATCATGGAC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLSSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDSSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCAAGGCAGCAAAGAATaGACGCCACAATGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDQGSKE*TPQCFE
Trigger: CTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGAAAGGGGTATCCATTaGGACGGATGTGGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQERGIH*DGCGHH
Trigger: ATGATGCCCACATCCGTCTCAATGGATACCCCTTTC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 4 (lower is better)
Translates to: PKRCFPASSELMGGLHLADNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCTAAAACTCCCCTGCTaGAAGCCTCTGTTATCCATG +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQLKLPC*KPLLSM
Trigger: CATGGATAACAGAGGCTTTCAGCAGGGGAGTTTTAG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATGCAGAATGACCGCTaGTTCTGGGCTGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIMQNDR*FWAGRM
Trigger: CATCCTTCCAGCCCAGAATCAGCGGTCATTCTGCAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGCCACATTTCTTCATaGGCAGATGTCTTGGGTCGG +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQCHISS*ADVLGR
Trigger: CCGACCCAAGACATCTGCTCATGAAGAAATGTGGCA...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATACAGCTACTGAGCTCTaGTCTGAGGAACTCTTACTT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHTATEL*SEELLL
Trigger: AAGTAAGAGTTCCTCAGATCAGAGCTCAGTAGCTGT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTGGCCTTGGTCAAATaGAGAAGAGTCACCCACATG +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLALVK*RRVTHM
Trigger: CATGTGGGTGACTCTTCTTCATTTGACCAAGGCCAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTAGATACACCAGCTGCTaGTGCAGCCGACAAGACCTC +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIRYTSC*CSRQDL
Trigger: GAGGTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTACAGATACACCAGCTaGTGCTGCAGCCGACAAGAC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILYRYTS*CCSRQD
Trigger: GTCTTGTCGGCTGCAGCAGCAGCTGGTGTATCTGTA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTGTGCGGATAAACAGTaGTCCCCACAGACCACCAAA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDCADKQ*SPQTTK
Trigger: TTTGGTGGTCTGTGGGGAGCACTGTTTATCCGCACA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACTTGCTTGTCATGGCTaGAGCCATCAGAGGCACGAT +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCILACHG*SHQRHD
Trigger: ATCGTGCCTCTGATGGCTGCAGCCATGACAAGCAAG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCCGCCCAAGAGCATCTaGCACCCACTTGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIPPKSI*HPLACH
Trigger: ATGACAAGCAAGTGGGTGGCAGATGCTCTTGGGCGG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCCCTGGTTTACCAGTATaGAGTCTAGACTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTPGLPV*SLDLVP
Trigger: GGGAACCAAGTCTAGACTGCATACTGGTAAACCAGG...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACGGGTTGGTGGGAATATaGAGAATGACCGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYGLVGI*RMTADS
Trigger: AGAATCAGCGGTCATTCTGCATATTCCCACCAACCC...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAACCTCCTTATCGCTACTaGACTATGAAATATGACCAA +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEPPYRY*TMKYDQ
Trigger: TTGGTCATATTTCATAGTGCAGTAGCGATAAGGAGG...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTGGAGGGCCAATCGGTaGTTAGCATCTACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHWRANR*LASTKY
Trigger: ATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGGTCCCATCCAAGAAATaGAAACTCCACACGTCATAT +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLVPSKK*KLHTSY
Trigger: ATATGACGTGTGGAGTTTGCATTTCTTGGATGGGAC...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCTCTGGTTCAGGCTATaGCTAGGAACAGGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQLWFRL*LGTGEN
Trigger: ATTCTCGCCTGTTCCTAGGCATAGCCTGAACCAGAG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGGGTCTTCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: SQQRIISPGFHHIHCQGLQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...AAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTACTTGCCCAACTGGGTaGTCTTTCGCTTCCGACACC +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLITCPTG*SFASDT
Trigger: GGTGTCGGAAGCGAAAGACCACCCAGTTGGGCAAGT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGGATACTTGCCCAACTaGGTGGTCTTTCGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILGYLPN*VVFRFR
Trigger: TCGGAAGCGAAAGACCACCCAGTTGGGCAAGTATCC...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILASVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AATGCTGCCACCAAGGCAGCAAAGAATGAACGCCACAATGTTTTGAGGGGAAAAATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: NAATKAAKNERHNVLRGKMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...TTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTGGCTTTCCTTTCTCTaGTTTGAAAAGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHWLSFL*FEKQSP
Trigger: GGGGCTTTGCTTTTCAAACCAGAGAAAGGAAAGCCA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGAGAAAGGCAGCTATGTaGCCCTGTTTTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQRKAAM*PCFLQG
Trigger: CCCTTGGAGAAAACAGGGCCACATAGCTGCCTTTCT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGCTGTGTGTCACCTCTaGTCCATGTGTTGTGAGACT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQAVCHL*SMCCET
Trigger: AGTCTCACAACACATGGACCAGAGGTGACACACAGC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACATGGCAGCAGCAACTaGGCCACATGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIHGSSN*ATWQRK
Trigger: TTTCCTTTGCCATGTGGCCCAGTTGCTGCTGCCATG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCCTTTTATGGCTGGATaGCTACCAGCTACTCTTACT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHPFMAG*LPATLT
Trigger: AGTAAGAGTAGCTGGTAGCCATCCAGCCATAAAAGG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCTTTTATGGCTGGATaGCTACCAGCTACTCTTACT +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLPFMAG*LPATLT
Trigger: AGTAAGAGTAGCTGGTAGCCATCCAGCCATAAAAGG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACCCGACAAGTATCAATaGCTTTGGCCCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIPDKYQ*LWPSQR
Trigger: CCTCTGTGAGGGCCAAAGCCATTGATACTTGTCGGG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCCCCGACAAGTATCAATaGCTTTGGCCCTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFPDKYQ*LWPSQR
Trigger: CCTCTGTGAGGGCCAAAGCCATTGATACTTGTCGGG...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCTTCCTGCGGAAACTTaGGCTCTATTAGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLPAET*ALLALV
Trigger: AACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAGACCAACACAGAACTaGAGGCAGAAATTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILARPTQN*RQKLGL
Trigger: AAGGCCCAATTTCTGCCTCCAGTTCTGTGTTGGTCT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642383.1
3UTR CAA 72 bp AAAGGTGGTATGAAATTGAGACAGGCACCTTTTCAATaGGATACAAGCACCTTTGGTGTCACCAGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: KGGMKLRQAPFQ*DTSTFGVTRPC
Trigger: ACAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCATACCACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp TCCATGATCCTATTTGAAGAACCTATTCCTCCACCATaGTACGACTTGTCCTCTGGAGTAGAAATGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SMILFEEPIPPP*YDLSSGVEMAG
Trigger: TCCAGCCATTTCTACTCCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
3UTR CAA 72 bp ACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAAACTCTTCTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TKDHFSGVSSHP*PGSYEQTLLWL
Trigger: AAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAAGAGAGACAGGAGTTaGTGTGCAATGGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMKRDRS*CAMGKD
Trigger: ATCCTTTCCCATTGCACATCAACTCCTGTCTCTCTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307367.2
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAGAGAGACAGGAGTTaGTGTGCAATGGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQKRDRS*CAMGKD
Trigger: ATCCTTTCCCATTGCACATCAACTCCTGTCTCTCTT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307367.2
ENST00000646398.1
CDS-3UTR TCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACGTCCATGATCCTATTTaGAGAACCTATTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYVHDPI*RTYSST
Trigger: GGTGGAGGAATAGGTTCTTCAAATAGGATCATGGAC...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGCTCTCTCTTCAAAGGTaGCATGCTCAGAGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILLSLQR*HAQSSS
Trigger: GCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAG...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTCTTCCTGTATTTGTTaGAGCAGTGGCACAGGATGT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQSSCIC*SSGTGC
Trigger: ACATCCTGTGCCACTGCTTCAACAAATACAGGAAGA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTCAAGGCAGCAAAGAATaGACGCCACAATGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAQGSKE*TPQCFE
Trigger: CTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTG...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCAAGGCAGCAAAGAATaGACGCCACAATGTTTTGAG +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQQGSKE*TPQCFE
Trigger: CTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCCCCTTTGCTTGTGTTaGAACGGTTCTCATAATCAC +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQPLCLC*NGSHNH
Trigger: GTGATTATGAGAACCGTTTCAACACAAGCAAAGGGG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAACAAACTCCTAGGGTaGATTCAGCAGGAAAAAGCG +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMNKLLG*IQQEKA
Trigger: CGCTTTTTCCTGCTGAATTCACCCTAGGAGTTTGTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376088.7
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTATGCATATGCAGTTCTaGGTCTTCCCTGGTTTACCA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLMHMQF*VFPGLP
Trigger: TGGTAAACCAGGGAAGACTCAGAACTGCATATGCAT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCCTGTTCCAACACCTTaGATATATTTGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNPVPTP*IYLEAS
Trigger: GGATGCTTCCAAATATATTCAAGGTGTTGGAACAGG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCTAGTCTTTTGCCATTaGGGTATGTGGCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCLVFCH*GMWPFD
Trigger: ATCAAATGGCCACATACCTCAATGGCAAAAGACTAG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCTAGTCTTTTGCCATTaGGGTATGTGGCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLVFCH*GMWPFD
Trigger: ATCAAATGGCCACATACCTCAATGGCAAAAGACTAG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTTTTCCTGCTTCCTCTaGACTGATGGGTGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILFSCFL*TDGWLA
Trigger: TGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCAAGCAACTGAAATATaGAACAGAGCAGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQQATEI*NRAESA
Trigger: CGCTGACTCTGCTCTGTTTCATATTTCAGTTGCTTG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAAAGAAAGAGAAATCTaGATTCAGCGCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDKEREI*IQRMVR
Trigger: CCTCACCATGCGCTGAATTCAGATTTCTCTTTCTTT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGCCTAGTTACTGCTaGTGTCTAGACATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCMPSYC*CLDISF
Trigger: GAAGCTAATGTCTAGACATCAGCAGTAACTAGGCAT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTATGTTGTTCCGCATaGCTAGGGAGTAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLCCSA*LGSRIK
Trigger: CTTTATTCTACTCCCTAGTCATGCGGAACAACATAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLSSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCCGACAAGACCTCTCTaGGCTTGGCTTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIPTRPL*AWLHSS
Trigger: GGAAGAATGAAGCCAAGCGCAGAGAGGTCTTGTCGG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCTGATAAAAGCCCAATAAGGAGCATCAACAACCAGCCGGAAAAAGCATCACTCTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAA +
Preference number: 4 (lower is better)
Translates to: PDKSPIRSINNQPEKASLFHHIH*QGLMSK
Trigger: TTTGCTCATAAGACCCTGGCAATGGATGTGATGAAA...GAGTGATGCTTTTTCCGGCTGGTTGTTGATGCTCCTTATTGGGCTTTTATCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR GCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGAAATCCATAGCGGTTaGTGGAATGTCCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDEIHSG*WNVHQV
Trigger: GACCTGATGGACATTCCAGCAACCGCTATGGATTTC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR GCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTACCAGCTAACAAATaGCACCTGGAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLPANK*HLENYR
Trigger: ACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCTACCAGCTAACAAATaGCACCTGGAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLPANK*HLENYR
Trigger: ACGGTAATTTTCCAGGTGGCATTTGTTAGCTGGTAG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGGGTTGGTGGGAATATaGAGAATGACCGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQGLVGI*RMTADS
Trigger: AGAATCAGCGGTCATTCTGCATATTCCCACCAACCC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTACTGGCTGTATTTGTTaGTTAAGCATGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGTGCIC*LSMSNC
Trigger: ACAGTTGGACATGCTTAAGCAACAAATACAGCCAGT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCCCCTCACATCTGAATaGGTTCATAAGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCPLTSE*VHKILV
Trigger: AACCAAGATCTTATGAACGCATTCAGATGTGAGGGG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGTGTGGGATAACAAGTaGATCTTCCTACTTATCACC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHVWDNK*IFLLIT
Trigger: GGTGATAAGTAGGAAGATGCACTTGTTATCCCACAC...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGTCCCATCCAAGAAATaGAAACTCCACACGTCATAT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNVPSKK*KLHTSY
Trigger: ATATGACGTGTGGAGTTTGCATTTCTTGGATGGGAC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCAAGCTACTTTCTGGATaGCTAGTTACTGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCKLLSG*LVTADV
Trigger: GACATCAGCAGTAACTAGGCATCCAGAAAGTAGCTT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATCCGAGTGTATTCATTaGGGAAAGCCAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCISECIH*GKPGWQ
Trigger: CTGCCATCCTGGCTTTCCCCAATGAATACACTCGGA...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGCATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACATAATCACAGAGCTTaGAGGAGTCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSHNHRA*RSPEGH
Trigger: GTGGCCTTCTGGACTCCTCCAAGCTCTGTGATTATG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCAGTGGGTGGAGTGTATaGTGGCAATGGAGGAGAATG +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFSGWSV*WQWRRM
Trigger: CATTCTCCTCCATTGCCACCATACACTCCACCCACT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTCCGAAGCTTTAGAGTaGGTGGAGTGTATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILSEALE*VECMVA
Trigger: TGCCACCATACACTCCACCCACTCTAAAGCTTCGGA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GCSEALEWVECMVAMEENFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAAGAAAGGCAGCTATGTaGCCCTGTTTTCTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIRKAAM*PCFLQG
Trigger: CCCTTGGAGAAAACAGGGCCACATAGCTGCCTTTCT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTCAGGTCTTCATCACTaGAGCTGTTCTGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQSGLHH*SCSGSY
Trigger: GTAGCTTCCAGAACAGCTCCAGTGATGAAGACCTGA...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATATCCATAGCGGTTGCTaGAATGTCCATCAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDIHSGC*NVHQVF
Trigger: GAAGACCTGATGGACATTCCAGCAACCGCTATGGAT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGGTTCTGAGTCTTCCCTaGTTTACCAGTATGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQVLSLP*FTSMQS
Trigger: AGACTGCATACTGGTAAACCAGGGAAGACTCAGAAC...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATACATGGCAAAGGAAATaGCTGTGTGTCACCTCTGGT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDTWQRK*LCVTSG
Trigger: ACCAGAGGTGACACACAGCCATTTCCTTTGCCATGT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCATGGCAGCAGCAACTaGGCCACATGGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIHGSSN*ATWQRK
Trigger: TTTCCTTTGCCATGTGGCCCAGTTGCTGCTGCCATG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGATATTGTCATTCTCTaGAGGGCCAATCGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLDIVIL*RANRCL
Trigger: TAAGCACCGATTGGCCCTCCAGAGAATGACAATATC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTCTCGTTCCTTTTATaGCTGGATGGCTACCAGCTA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLSFLL*LDGYQL
Trigger: TAGCTGGTAGCCATCCAGCCATAAAAGGAACGAGAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATAGGATATCTGTTCTGTaGATCTTACCACCTCTACTC +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNRISVL*ILPPLL
Trigger: GAGTAGAGGTGGTAAGATCCACAGAACAGATATCCT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAGGATATCTGTTCTGTaGATCTTACCACCTCTACTC +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDRISVL*ILPPLL
Trigger: GAGTAGAGGTGGTAAGATCCACAGAACAGATATCCT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGTTTAGATTCAGCCTCTaGTGTCAAAACAATTCAACT +
Preference number: 4 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALFRFSL*CQNNST
Trigger: AGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAA...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTGTAGGGGTGTGGGATaGCTTTCCTTCCACCATCTT +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILCRGVG*LSFHHL
Trigger: AAGATGGTGGAAGGAAAGCCATCCCACACCCCTACA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACAAGTATCAATGGCTTTaGCCCTCACAGAGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYKYQWL*PSQRSK
Trigger: TTTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTT...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTCGATTTTGCCAGATaGCATTTCACTCACCAAATC +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTLDFAR*HFTHQI
Trigger: GATTTGGTGAGTGAAATGCCATCTGGCAAAATCGAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAAAGCTAAGAAAGCATaGCTAAGGGCTAGCAACACT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHKAKKA*LRASNT
Trigger: AGTGTTGCTAGCCCTTAGCCATGCTTTCTTAGCTTT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGGTAGGAATGCAAAATaGTATAGCCACTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNGRNAK*YSHFGT
Trigger: AGTGCCAAAGTGGCTATACCATTTTGCATTCCTACC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGACTGGAGGCAGAAATTaGGCCTTCATGCCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILTGGRN*AFMPKV
Trigger: CACCTTTGGCATGAAGGCCCAATTTCTGCCTCCAGT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642383.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCCTCCAAGAAGTCCATaGTCCTATTTGAAGAACCTA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMPPRSP*SYLKNL
Trigger: TAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCATCACTCACACTGTaGATTAAGGCCCATGTTGAC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILASLTL*IKAHVD
Trigger: GTCAACATGGGCCTTAATTCACAGTGTGAGTGATGC...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATATGCCCAGCAGAATaGATGGCACGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIICPAE*MARAQR
Trigger: TCTTTGAGCTCGTGCCATTCATTCTGCTGGGCATAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ATCTTCCACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: IFHSHTVLSKDSQQRIISIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...AGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILATVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CATTTGTCTCTCTCTTCAAAGGTGACATGCTCAGAGTTCCAGCAACAATGTTCAACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: HLSLSSKVTCSEFQQQCSTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...TGAACATTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAGACAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTCATCTGTGCTGATGATAAGCTGGGACCAACTATTCCACTCTGGACATTTGTCCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LICADDKLGPTIPLWTFVLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...GACAAATGTCCAGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCACAGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATACACAAAAGCAAACTTaGGACACCCTCCTTATCGCT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDTQKQT*DTLLIA
Trigger: AGCGATAAGGAGGGTGTCTCAAGTTTGCTTTTGTGT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAAAACCAGACTGCCCTTaGGCCAAACACTGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIKPDCP*AKHCFE
Trigger: TTCAAAGCAGTGTTTGGCTCAAGGGCAGTCTGGTTT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCCAGGACAACTACACTaGTTGAACTTCAAATTGACA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHPGQLH*LNFKLT
Trigger: TGTCAATTTGAAGTTCAATCAGTGTAGTTGTCCTGG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCATGCCTAGTTACTGCTaGTGTCTAGACATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTMPSYC*CLDISF
Trigger: GAAGCTAATGTCTAGACATCAGCAGTAACTAGGCAT...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMSSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQSSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTTCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILASSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNFHHIH*QGLMSK
Trigger: TTTGCTCATAAGACCCTGGCAATGGATGTGATGAAA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCTCCTTATCGCTACTaGACTATGAAATATGACCAA +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLPPYRY*TMKYDQ
Trigger: TTGGTCATATTTCATAGTGCAGTAGCGATAAGGAGG...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCACTGGCTGTATTTGTTaGTTAAGCATGTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCTGCIC*LSMSNC
Trigger: ACAGTTGGACATGCTTAAGCAACAAATACAGCCAGT...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGATGTATAGTATGCTCTaGTCTTCCTGTAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLMYSML*SSCKGF
Trigger: AAACCCTTTACAGGAAGAGCAGAGCATACTATACAT...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTCCCCTCACATCTGAATaGGTTCATAAGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAPLTSE*VHKILV
Trigger: AACCAAGATCTTATGAACGCATTCAGATGTGAGGGG...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACCTCTCTTCTCGATTTTaGCAGATGGCATTTCACTCA +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYLSSRF*QMAFHS
Trigger: TGAGTGAAATGCCATCTGGCAAAATCGAGAAGAGAG...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCISVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFSVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTCACTGGAGCTGTTCTaGAAGCTACTAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILSLELF*KLLKLP
Trigger: GGGGAGTTTTAGTAGCTTCCAGAACAGCTCCAGTGA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000643129.1
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACAGGCACCTTTTCAATTaGATACAAGCACCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYRHLFN*IQAPLV
Trigger: CACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCT...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAGATATTGTCATTCTCTaGAGGGCCAATCGGTGCTTA +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLDIVIL*RANRCL
Trigger: TAAGCACCGATTGGCCCTCCAGAGAATGACAATATC...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGTCCAACTGTTAAAGTaGCAATGGCAGAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHVQLLK*QWQKEH
Trigger: ATGTTCTTTCTGCCATTGCCACTTTAACAGTTGGAC...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAGAAAGAGGAGAGCATTaGAATATGTTTCTAACCAAA +
Preference number: 4 (lower is better)
Translates to: QLSTKLPAETWALLALVEERGEH*NMFLTK
Trigger: TTTGGTTAGAAACATATTCCAATGCTCTCCTCTTTC...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCACAGGAGGCTGGCCTTaGTCAAATGAAGAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFTGGWP*SNEEES
Trigger: TGACTCTTCTTCATTTGACCAAGGCCAGCCTCCTGT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTTTTGGCTACTGCAGTTaGAGCCAGCCCTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIFGYCS*SQPYKE
Trigger: CTCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAA...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp TTCGCCATCTGTGCTATATGCTTTAACACATCCTTTTaGGTAATGATTCCAAGCAATCGCCCGTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: FAICAICFNTSF*VMIPSNRPLCV
Trigger: TACACACAACGGGCGATTGCTTGGAATCATTACCAAAAAGGATGTGTTAAAGCATATAGCACAGATGGCGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAGTCTGTCATCCAATaGGCAGAGATGTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQKSVIQ*AEMSIK
Trigger: TTTGATAGACATCTCTGCTCATTGGATGACAGACTT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATTGCCAGGGTCTTATaGGCAAACTCTTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIIARVL*ANSSLA
Trigger: AGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATACAGTCATACTGTCCTaGGTAAGGACAGTCAACAAA +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDTVILS*VRTVNK
Trigger: TTTGTTGACTGTCCTTACTCAGGACAGTATGACTGT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CATTTGTCTCTCTCTTCAAAGGTGACATGCTCAGAGTTCCAGCAACAATGTTCAGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 4 (lower is better)
Translates to: HLSLSSKVTCSEFQQQCSDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...TGAACATTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAGACAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR TCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCATGCATATGCAGTTCTaGGTCTTCCCTGGTTTACCA +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFMHMQF*VFPGLP
Trigger: TGGTAAACCAGGGAAGACTCAGAACTGCATATGCAT...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCGCTACTGCACTATaGAATATGACCAAACCTTTC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMIATAL*NMTKPF
Trigger: GAAAGGTTTGGTCATATTTCATAGTGCAGTAGCGAT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAAAAGAAAGAGAAATCTaGATTCAGCGCATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLKEREI*IQRMVR
Trigger: CCTCACCATGCGCTGAATTCAGATTTCTCTTTCTTT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAGGACCATGTATTTTaGGGTACCCTTAATGTGACA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQKDHVF*GTLNVT
Trigger: TGTCACATTAAGGGTACCTCAAAATACATGGTCCTT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGATATTAAGGCAAAATaGAGATCTGCAACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNDIKAK*RSATAS
Trigger: AGAAGCTGTTGCAGATCTTCATTTTGCCTTAATATC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642885.1
CDS-3UTR GCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATACTCCACCTATAGGTaGTCCAAAGGCTACAGATAC +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIYSTYR*SKGYRY
Trigger: GTATCTGTAGCCTTTGGAGCACCTATAGGTGGAGTA...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAFHHIH*QGLMSK
Trigger: TTTGCTCATAAGACCCTGGCAATGGATGTGATGAAA...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLFHHIH*QGLMSK
Trigger: TTTGCTCATAAGACCCTGGCAATGGATGTGATGAAA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTGGAGGGGGAGTAATTaGACACAGGTAAAACTACAG +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILWRGSN*TQVKLQ
Trigger: CTGTAGTTTTACCTGTGTGCAATTACTCCCCCTCCA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCATGTATAGTATGCTCTaGTCTTCCTGTAAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: DIVILWRANRCLASTKYTMYSML*SSCKGF
Trigger: AAACCCTTTACAGGAAGAGCAGAGCATACTATACAT...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTTTGAACCACTCATTTaGTTAGAAAGCCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLFEPLI*LESLAF
Trigger: AAAGGCCAGGCTTTCTAAGCAAATGAGTGGTTCAAA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCTCTCTTCTCGATTTTaGCAGATGGCATTTCACTCA +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDLSSRF*QMAFHS
Trigger: TGAGTGAAATGCCATCTGGCAAAATCGAGAAGAGAG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTCAGAGGTTTCTGTaGTGTAGGCACAAAATGATG +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMIQRFL*CRHKMM
Trigger: CATCATTTTGTGCCTACACCACAGAAACCTCTGAAT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307367.2
ENST00000646398.1
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGTGCTGATGATAAGCTaGGACCAACTATTCCACTCT +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILVLMIS*DQLFHS
Trigger: AGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCAC...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACTCAAAGAGATGCCATaGGGTGTGAAACTCCACATA +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSLKEMP*GVKLHI
Trigger: TATGTGGAGTTTCACACCCCATGGCATCTCTTTGAG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGAGCAAACTCTTCTTTaGCTTCAAGAAAGGGGTATC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDEQTLL*LQERGI
Trigger: GATACCCCTTTCTTGAAGCCAAAGAAGAGTTTGCTC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTAGTGTATGGTGGCAATaGAGGAGAATGCTCCGTGAA +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLISVWWQ*RRMLRE
Trigger: TTCACGGAGCATTCTCCTCCATTGCCACCATACACT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTAATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCAGGTACAACTTCACTaGGAACTCCAGGCAACTGAT +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIQVQLH*ELQATD
Trigger: ATCAGTTGCCTGGAGTTCCCAGTGAAGTTGTACCTG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTTCAGGTCTTCATCACTaGAGCTGTTCTGGAAGCTAC +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLISGLHH*SCSGSY
Trigger: GTAGCTTCCAGAACAGCTCCAGTGATGAAGACCTGA...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCTAACAAATGCCACCTaGAAAATTACCGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHLTNAT*KITVFA
Trigger: TGCAAAAACGGTAATTTTCCAGGTGGCATTTGTTAG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCCCTGTGTCTTAGGATaGCTCTGCATTTTATTTAGA +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMPCVLG*LCILFR
Trigger: TCTAAATAAAATGCAGAGCCATCCTAAGACACAGGG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACCCCTGTGTCTTAGGATaGCTCTGCATTTTATTTAGA +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYPCVLG*LCILFR
Trigger: TCTAAATAAAATGCAGAGCCATCCTAAGACACAGGG...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCGTCCAACTGTTAAAGTaGCAATGGCAGAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTVQLLK*QWQKEH
Trigger: ATGTTCTTTCTGCCATTGCCACTTTAACAGTTGGAC...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGATCTCACTAAACCCTaGTTACTTCATCATGTTCAA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNDLTKP*LLHHVQ
Trigger: TTGAACATGATGAAGTAACCAGGGTTTAGTGAGATC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGATCTCACTAAACCCTaGTTACTTCATCATGTTCAA +
Preference number: 4 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDDLTKP*LLHHVQ
Trigger: TTGAACATGATGAAGTAACCAGGGTTTAGTGAGATC...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAAAGCTAAGAAAGCATaGCTAAGGGCTAGCAACACT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDKAKKA*LRASNT
Trigger: AGTGTTGCTAGCCCTTAGCCATGCTTTCTTAGCTTT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGACAACACACTAATGTaGCTTCACCATCCAAATATG +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDDNTLM*LHHPNM
Trigger: CATATTTGGATGGTGAAGTCACATTAGTGTGTTGTC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCACGCTGGGAGGTACAATaGGTGTCCAGTTATTTTAGT +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSRWEVQ*VSSYFS
Trigger: ACTAAAATAACTGGACACTCATTGTACCTCCCAGCG...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCCCTGTTCCAACACCTTaGATATATTTGGAAGCATCC +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFPVPTP*IYLEAS
Trigger: GGATGCTTCCAAATATATTCAAGGTGTTGGAACAGG...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATATCGCTACTGCACTATaGAATATGACCAAACCTTTC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDIATAL*NMTKPF
Trigger: GAAAGGTTTGGTCATATTTCATAGTGCAGTAGCGAT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCTGAACCACAACAGGTaGTTGAACTACTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMLNHNR*LNYLKH
Trigger: ATGTTTTAAGTAGTTCAATCACCTGTTGTGGTTCAG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTACCAGGACAACTACACTaGTTGAACTTCAAATTGACA +
Preference number: 4 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLPGQLH*LNFKLT
Trigger: TGTCAATTTGAAGTTCAATCAGTGTAGTTGTCCTGG...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTTTCATATGTCTGCCTTaGGATGCTAAAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIFICLP*DAKALI
Trigger: GATGAGGGCTTTAGCATCTCAAGGCAGACATATGAA...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATCTTAGACTGCCCCTaGATTCCAACAGATTTGTAC +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIILDCP*IPTDLY
Trigger: GTACAAATCTGTTGGAATTCAGGGGCAGTCTAAGAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTGACATTAGCTTCAGCTaGACTTTCACCAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIDISFS*TFTNSQ
Trigger: CTGAGAGTTGGTGAAAGTTCAGCTGAAGCTAATGTC...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCATCTATTAGCTTTGGTTaGAGCTACTTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSSISFG*SYFLDA
Trigger: GGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGA...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCAGCCGACAAGACAGTaGTGTATTTATTTATATGGA +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQQPTRQ*CIYLYG
Trigger: TCCATATAAATAAATACATCACTGTCTTGTCGGCTG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR GCA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTGGCAATATAAAATATaGTGGCTGTTTCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHWQYKI*WLFQVL
Trigger: GAGAACTTGAAACAGCCAGCATATTTTATATTGCCA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGAGCTCAATGTTCTATaGACCACCCAAAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDELNVL*TTQKMF
Trigger: AAACATCTTTTGGGTGGTGCATAGAACATTGAGCTC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAAAGCTACTTTCTGGATaGCTAGTTACTGCTGATGTC +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSKLLSG*LVTADV
Trigger: GACATCAGCAGTAACTAGGCATCCAGAAAGTAGCTT...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCAGTTATTCAGCAGCTaGAAGTATTCATGCAATAGG +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDQLFSS*KYSCNR
Trigger: CCTATTGCATGAATACTTGCAGCTGCTGAATAACTG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGCAGCAACAATGTTCATaGTTAAACCAGAATCCCCCT +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILQQQCS*LNQNPP
Trigger: AGGGGGATTCTGGTTTAACCATGAACATTGTTGCTG...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATGGAATCAGGATCTTaGTTCGCCATCTGTGCTATA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIMESGS*FAICAI
Trigger: TATAGCACAGATGGCGAACCAAGATCCTGATTCCAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATAATACAACATATCCATaGTCTGTAATGTCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDNTTYP*SVMSFP
Trigger: CGGGAAGGACATTACAGACCATGGATATGTTGTATT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACATCATTCATGGAGGTaGCATCTGGGTAAGAGAATT +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSHHSWR*HLGKRI
Trigger: AATTCTCTTACCCAGATGCCACCTCCATGAATGATG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAAGGCACCTTTTCAATTaGATACAAGCACCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSRHLFN*IQAPLV
Trigger: CACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCT...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCCAGCTACTCTTACTTaGAAAATCCTAACTCTGTTG +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQPATLT*KILTLL
Trigger: CAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCGAAAGAGGAGAGCATTaGAATATGTTTCTAACCAAA +
Preference number: 4 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCERGEH*NMFLTK
Trigger: TTTGGTTAGAAACATATTCCAATGCTCTCCTCTTTC...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAACAAGAGATAGTGTaGGATAACAAGTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQKQEIV*DNKCIF
Trigger: GAAGATGCACTTGTTATCCCACACTATCTCTTGTTT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACCAGAAATTCTCTCCTTaGAGCAAGCAACTGAAATAT +
Preference number: 4 (lower is better)
Translates to: ETWALLALVEATFWMPSYQKFSP*SKQLKY
Trigger: ATATTTCAGTTGCTTGCTCCAAGGAGAGAATTTCTG...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTTAGAAATGAGAATGTaGCCAGCAAACGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILLEMRM*PANVWG
Trigger: TCCCCAAACGTTTGCTGGCCACATTCTCATTTCTAA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTTTGGTCATTCAGGTTaGGGAGCTTTTACAAAAGAA +
Preference number: 4 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLFGHSG*GAFTKE
Trigger: TTCTTTTGTAAAAGCTCCCCAACCTGAATGACCAAA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CCA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCAGTTGAATTTGCTCTaGTTTAAGAGTTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNQLNLL*FKSSPL
Trigger: TAAAGGAGAACTCTTAAACCAGAGCAAATTCAACTG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642885.1
3UTR CAA 72 bp CAGATGTTTAGAAATGAGAATGTGGCCAGCAAACGTTaGGGGAGTAACTTAAAGTTGCTAACACCCATTGTT +
Preference number: 4 (lower is better)
Translates to: QMFRNENVASKR*GSNLKLLTPIV
Trigger: AACAATGGGTGTTAGCAACTTTAAGTTACTCCCCAAACGTTTGCTGGCCACATTCTCATTTCTAAACATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCCCAATCAATTGTATTaGAATCATCATAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDPNQLY*NHHRSL
Trigger: TAGGGACCTATGATGATTTCAATACAATTGATTGGG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR TCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTATCTTAGACTGCCCCTaGATTCCAACAGATTTGTAC +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIILDCP*IPTDLY
Trigger: GTACAAATCTGTTGGAATTCAGGGGCAGTCTAAGAT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAAAGGACCATGTATTTTaGGGTACCCTTAATGTGACA +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSKDHVF*GTLNVT
Trigger: TGTCACATTAAGGGTACCTCAAAATACATGGTCCTT...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGAGACAGGAGTTGATGTaGAATGGGAAAGGATTTATG +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILRQELM*NGKGFM
Trigger: CATAAATCCTTTCCCATTGCACATCAACTCCTGTCT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307367.2
ENST00000646398.1
CDS-3UTR GCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTTCTTCAAAGGTGACATaGTCAGAGTTCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLISSKVT*SEFQQQ
Trigger: TTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGA...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFFHHIH*QGLMSK
Trigger: TTTGCTCATAAGACCCTGGCAATGGATGTGATGAAA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTTTCATCACATCCATTaGCAGGGTCTTATGAGCAAA +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILFHHIH*QGLMSK
Trigger: TTTGCTCATAAGACCCTGGCAATGGATGTGATGAAA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTGGCAATATAAAATATaGTGGCTGTTTCAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMWQYKI*WLFQVL
Trigger: GAGAACTTGAAACAGCCAGCATATTTTATATTGCCA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGATAGGTCAGGACGGTTaGAATTTCTCTTGCATAGTT +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILIGQDG*NFSCIV
Trigger: AACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCAATGGGGACAACACACTaGCCTGTTACACATACTTAT +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSMGTTH*PVTHTY
Trigger: ATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCAT...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTGTTAAAGTGGCAATaGCAGAAAGAACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDLLKWQ*QKEHFP
Trigger: AGGAAAATGTTCTTTCTGCCATTGCCACTTTAACAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCACCAGCTACTCTTACTTaGAAAATCCTAACTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSPATLT*KILTLL
Trigger: CAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGG...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGAAACAAGAGATAGTGTaGGATAACAAGTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQKQEIV*DNKCIF
Trigger: GAAGATGCACTTGTTATCCCACACTATCTCTTGTTT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCAGAAATTCTCTCCTTaGAGCAAGCAACTGAAATAT +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQQKFSP*SKQLKY
Trigger: ATATTTCAGTTGCTTGCTCCAAGGAGAGAATTTCTG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp TTTTTGCAGACAAGGAGAAAGCTCTATAACTTATCTTaGTGCACTTCAAAAGAGTACCAGCAACAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: FLQTRRKLYNLS*CTSKEYQQQAS
Trigger: GCTTGCTTGTTGCTGGTACTCTTTTGAAGTGCACAAAGATAAGTTATAGAGCTTTCTCCTTGTCTGCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTGTAAGTGGTTTCACTaGTTATGGTCTCTACATCTT +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFCKWFH*LWSLHL
Trigger: AAGATGTAGAGACCATAATCAGTGAAACCACTTACA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACTGAACCACAACAGGTaGTTGAACTACTTAAAACAT +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCILNHNR*LNYLKH
Trigger: ATGTTTTAAGTAGTTCAATCACCTGTTGTGGTTCAG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR GCA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTGAGCTCAATGTTCTATaGACCACCCAAAAGATGTTT +
Preference number: 4 (lower is better)
Translates to: MATSYSYLENPNSVETLIELNVL*TTQKMF
Trigger: AAACATCTTTTGGGTGGTGCATAGAACATTGAGCTC...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CCA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATACTAACAAATGCCACCTaGAAAATTACCGTTTTTGCA +
Preference number: 4 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCILTNAT*KITVFA
Trigger: TGCAAAAACGGTAATTTTCCAGGTGGCATTTGTTAG...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCCTGTTAAAGTGGCAATaGCAGAAAGAACATTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFLLKWQ*QKEHFP
Trigger: AGGAAAATGTTCTTTCTGCCATTGCCACTTTAACAG...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTTTAGATTCAGCCTCTaGTGTCAAAACAATTCAACT +
Preference number: 4 (lower is better)
Translates to: NISMVCNVLPALHPELYDFRFSL*CQNNST
Trigger: AGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR TCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCACTCTATGATTCTAGTTaGAGAGAATGGAATCAGGAT +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSLYDSS*REWNQD
Trigger: ATCCTGATTCCATTCTCTTCAACTAGAATCATAGAG...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR GCA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCAGGTTGGAATTTCTCTTaGATAGTTTTCAGTGATTGC +
Preference number: 4 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSGWNFS*IVFSDC
Trigger: GCAATCACTGAAAACTATGCAAGAGAAATTCCAACC...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CCA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTTCACCATCCAAATATaGAAAATGTGTTTTGGGTAC +
Preference number: 4 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILFTIQI*KMCFGY
Trigger: GTACCCAAAACACATTTTCCATATTTGGATGGTGAA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
3UTR CAA 72 bp ATTATTCATTTCAAGGAAGCTGGAAGAAATCATTCCTaGCTACTAACAAATTCACGGCAAAGTCCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: IIHFKEAGRNHS*LLTNSRQSPCL
Trigger: TAGACAAGGACTTTGCCGTGAATTTGTTAGTAGCAAGGAATGATTTCTTCCAGCTTCCTTGAAATGAATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp AACTTTAGTGGGGAAGGACAACTAATAAGACAGGTATaGGACCAGAAATGTACAGATAAGAACTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: NFSGEGQLIRQV*DQKCTDKNFDF
Trigger: GAAATCAAAGTTCTTATCTGTACATTTCTGGTCCAATACCTGTCTTATTAGTTGTCCTTCCCCACTAAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp TTGGCAAAATTAGACTACACCATGGAAAAACCAATTTaGTTCCCTACATCTATTCAAACCTTTACCCAGATC +
Preference number: 4 (lower is better)
Translates to: LAKLDYTMEKPI*FPTSIQTFTQI
Trigger: GATCTGGGTAAAGGTTTGAATAGATGTAGGGAACAAAATTGGTTTTTCCATGGTGTAGTCTAATTTTGCCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
3UTR CAA 72 bp AACTCCACACGTCATATACTTTCTTTCTTGGGTGATTaGGCAAAATTAGACTACACCATGGAAAAACCAATT +
Preference number: 4 (lower is better)
Translates to: NSTRHILSFLGD*AKLDYTMEKPI
Trigger: AATTGGTTTTTCCATGGTGTAGTCTAATTTTGCCAAATCACCCAAGAAAGAAAGTATATGACGTGTGGAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS CCA 90 bp TCTGTCGCCGAGGTCCGGAGCGGCGGAGCCCGTGTCCGCCGCCGGTaGGCAGCGCGCTCGGTCGGCTCTGGCGTCCAGGACACCAAGTTG +
Preference number: 5 (lower is better)
Translates to: SVAEVRSGGARVRRR*AARSVGSGVQDTKL
Trigger: CAACTTGGTGTCCTGGACGCCAGAGCCGACCGAGCGCGCTGCCCACCGGCGGCGGACACGGGCTCCGCCGCTCCGGACCTCGGCGACAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS TCA 90 bp GGCAGCGCGCTCGGTCGGCTCTGGCGTCCAGGACACCAAGTTGAGTaGGCGCCCCACGTAGCCGGCAGAGCTTCATTCACACAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSALGRLWRPGHQVE*APHVAGRASFTQPS
Trigger: GCTGGGCTGTGTGAATGAAGCTCTGCCGGCTACGTGGGGCGCTCACTCAACTTGGTGTCCTGGACGCCAGAGCCGACCGAGCGCGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS TCA 90 bp GGTGGGCAGCGCGCTCGGTCGGCTCTGGCGTCCAGGACACCAAGTTaGGTGAGCGCCCCACGTAGCCGGCAGAGCTTCATTCACACAGCC +
Preference number: 5 (lower is better)
Translates to: GGQRARSALASRTPS*VSAPRSRQSFIHTA
Trigger: GGCTGTGTGAATGAAGCTCTGCCGGCTACGTGGGGCGCTCACTCAACTTGGTGTCCTGGACGCCAGAGCCGACCGAGCGCGCTGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS CCA 90 bp GCAGCTTCCACTGACGTTATCGCACGGGCACAGGTACAACTTCACTaGGAACTCCAGGCAACTGATTTGCTCTGTCGCCGAGGTCCGGAG +
Preference number: 5 (lower is better)
Translates to: AASTDVIARAQVQLH*ELQATDLLCRRGPE
Trigger: CTCCGGACCTCGGCGACAGAGCAAATCAGTTGCCTGGAGTTCCCAGTGAAGTTGTACCTGTGCCCGTGCGATAACGTCAGTGGAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GTAGACTCCCACGCCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: VDSHASRSVRQFTPFACVSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...AACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGGCGTGGGAGTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTCCCTACACCAGGGATaGGCTCCTCCAAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETASLHQG*APPRSP
Trigger: TGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTGGTACACTGAAGTGTTaGGGGGTAGAGGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAGTLKC*GVEGWW
Trigger: CCACCAACCCTCTACCCCCAAACACTTCAGTGTACC...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTATGGGTGGCTTGCATTaGGCTCTGATCCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAMGGLH*ALIQCR
Trigger: CCTGCACTGGATCAGAGCCAAATGCAAGCCACCCAT...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCAGGAGCAAAGCCCTGTaGGTCCCATCAACTCAGACG +
Preference number: 5 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSRSKAL*VPSTQT
Trigger: CGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCCT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS TCA 90 bp TCTTCATCACTGGAGCTGTTCTGGAAGCTACTAAAACTCCCCTGCTaGAAGCCTCTGTTATCCATGGCACCCTGCCACATGGCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SSSLELFWKLLKLPC*KPLLSMAPCHMAIL
Trigger: CAAGATGGCCATGTGGCAGGGTGCCATGGATAACAGAGGCTTTCAGCAGGGGAGTTTTAGTAGCTTCCAGAACAGCTCCAGTGATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000482218.2
CDS-3UTR CAA 90 bp CCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTGAAACGGTTCTCACTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: PAGLSGSSPPLLVLKRFSLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...TGAGAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CCAGCCGGTCTGTCAGGCAGTTCACCCCCTTTGCTTGTGTTGAAACGGTTCTCAGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: PAGLSGSSPPLLVLKRFSVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...TGAGAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCCTGACAGACCGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GTAGAAATGGCTGGAGCTGGTAGAAACACAAATGGCAACTTGAACAAGCTGCTGCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: VEMAGAGRNTNGNLNKLLPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...CAGCAGCTTGTTCAAGTTGCCATTTGTGTTTCTACCAGCTCCAGCCATTTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCTCCAGGCAACTGATTaGCTCTGTCGCCGAGGTCCG +
Preference number: 5 (lower is better)
Translates to: DIVILWRANRCLASTKYTLQATD*LCRRGP
Trigger: CGGACCTCGGCGACAGAGCAAATCAGTTGCCTGGAG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGGTACACTGAAGTGTTaGGGGGTAGAGGGTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PKRCFPASSELMGGLHLAGTLKC*GVEGWW
Trigger: CCACCAACCCTCTACCCCCAAACACTTCAGTGTACC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTGAACTGATGGGTGGCTaGCATTTGGCTCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAELMGG*HLALIQ
Trigger: CTGGATCAGAGCCAAATGCAAGCCACCCATCAGTTC...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GGATGTTCCGAAGCTTTAGAGTGGGTGGAGTGTATGGTGGCAATGGAGGAGAATAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: GCSEALEWVECMVAMEENRKGYP*RRMWAS
Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...ATTCTCCTCCATTGCCACCATACACTCCACCCACTCTAAAGCTTCGGAACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTAAAGCCCACAAGTCTTaGGGACTCCCGGGATACCAC +
Preference number: 5 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGKAHKS*GLPGYH
Trigger: GTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: HTVLSKDSQQRIISPGFHPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...ATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AATGATTCCAAGCAATCGCCCGTTGTGTGTAACCAGGCACTGCCGCAGTCCCAGTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: NDSKQSPVVCNQALPQSQYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...CTGGGACTGCGGCAGTGCCTGGTTACACACAACGGGCGATTGCTTGGAATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS TCA 90 bp CCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATGATCCTATTTaGAGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTCCTAC +
Preference number: 5 (lower is better)
Translates to: PYTRDWLLQEVHDPI*RTYSSTIVRLVLSY
Trigger: GTAGGAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTCCCTACACCAGGGATaGGCTCCTCCAAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHSLHQG*APPRSP
Trigger: TGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAAGCCAGCTGCCACATaGCACTGTAGACTCCCACGC +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMKPAAT*HCRLPR
Trigger: GCGTGGGAGTCTACAGTGCAATGTGGCAGCTGGCTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAAAGCCCACAAGTCTTaGGGACTCCCGGGATACCAC +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHKAHKS*GLPGYH
Trigger: GTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGAAAGCCCACAAGTCTTaGGGACTCCCGGGATACCAC +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLKAHKS*GLPGYH
Trigger: GTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGCCACCATTGTACGACTaGTCCTCTCCTACTTCTCGG +
Preference number: 5 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLPPLYD*SSPTSR
Trigger: CCGAGAAGTAGGAGAGGACAAGTCGTACAATGGTGG...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTGTGGCCAGCAAACGTTaGGGGAGTAACTTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAVASKR*GSNLKL
Trigger: CAACTTTAAGTTACTCCCCAAACGTTTGCTGGCCAC...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCTTGGCAGCCCGCATTaGGTCATTCAGGTTGGGGAG +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQLGSPH*VIQVGE
Trigger: CTCCCCAACCTGAATGACCAAATGCGGGCTGCCAAG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTCCCTACACCAGGGATaGGCTCCTCCAAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQSLHQG*APPRSP
Trigger: TGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGGA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGRKGYP*RRMWAS
Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAAAGCCCACAAGTCTTaGGGACTCCCGGGATACCAC +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLKAHKS*GLPGYH
Trigger: GTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCCAAGCAATCGCCCGTaGTGTGTAACCAGGCACTGC +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQPSNRP*CVTRHC
Trigger: GCAGTGCCTGGTTACACACAACGGGCGATTGCTTGG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTGCCACATGGCCATCTaGATCCTATCTTCACCCACG +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLCHMAI*ILSSPT
Trigger: CGTGGGTGAAGATAGGATCAAGATGGCCATGTGGCA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTGGTGTCACCAGGCCTaGTCCATACCCCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQWCHQA*SIPLCL
Trigger: AAGACACAGGGGTATGGACAAGGCCTGGTGACACCA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTCAGGCACCTTTTCAATaGGATACAAGCACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETAQAPFQ*DTSTFG
Trigger: ACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTG...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CAAAGAGCTTACTACAGAGAAATTCAAATAGTGGCCCATGGGCCGGAACCCAGCAACACAAAAGCAAACTaGAGACACCCTCCTTATCGC +
Preference number: 5 (lower is better)
Translates to: QRAYYREIQIVAHGPEPSNTKAN*RHPPYR
Trigger: GCGATAAGGAGGGTGTCTCAAGTTTGCTTTTGTGTT...GCTGGGTTCCGGCCCATGGGCCACTATTTGAATTTCTCTGTAGTAAGCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGGTATCAAAGGGATATaGTCATTCTCTGGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PKRCFPASSELMGGLHLAGIKGI*SFSGGP
Trigger: TGGCCCTCCAGAGAATGACAATATCCCTTTGATACC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGCAATTAGCCAACCTTaGAGCCAAACCATAGGACTG +
Preference number: 5 (lower is better)
Translates to: PKRCFPASSELMGGLHLAAISQP*SQTIGL
Trigger: CAGTCCTATGGTTTGGCTCAAAGGTTGGCTAATTGC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTGTGGCCAGCAAACGTTaGGGGAGTAACTTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: PKRCFPASSELMGGLHLAVASKR*GSNLKL
Trigger: CAACTTTAAGTTACTCCCCAAACGTTTGCTGGCCAC...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTAGGAGCAAAGCCCTGTaGGTCCCATCAACTCAGACG +
Preference number: 5 (lower is better)
Translates to: GQDGWNFSCIVFSDCILARSKAL*VPSTQT
Trigger: CGTCTGAGTTGATGGGACCAACAGGGCTTTGCTCCT...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTCATCTGTGCTGATGATAAGCTGGGACCAACTATTCCACTCTGGACATTTGTCACTTTGGCAGACAGTTaGGTGGCACTCCTACTTCTC +
Preference number: 5 (lower is better)
Translates to: LICADDKLGPTIPLWTFVTLADS*VALLLL
Trigger: GAGAAGTAGGAGTGCCACCAAACTGTCTGCCAAAGT...GACAAATGTCCAGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCACAGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS TCA 90 bp CCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATGATCCTATTTaGAGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTTCAAT +
Preference number: 5 (lower is better)
Translates to: PYTRDWLLQEVHDPI*RTYSSTIVRLVLFN
Trigger: ATTGAAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS TCA 90 bp CCCTACACCAGGGATTGGCTCCTCCAAGAAGTCCATGATCCTATTTaGAGAACCTATTCCTCCACCATTGTACGACTTGTCCTCTGTATT +
Preference number: 5 (lower is better)
Translates to: PYTRDWLLQEVHDPI*RTYSSTIVRLVLCI
Trigger: AATACAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGACTTCTTGGAGGAGCCAATCCCTGGTGTAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCCACCATTGTACGACTaGTCCTCTGGTAGGAACATC +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDPPLYD*SSGRNI
Trigger: GATGTTCCTACCAGAGGACAAGTCGTACAATGGTGG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307367.2
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATCCTATTCCTCCACCATaGTACGACTTGTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHPIPPP*YDLSSG
Trigger: ACCAGAGGACAAGTCGTACAATGGTGGAGGAATAGG...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307367.2
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETADSLLL*VISRCL
Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CCAGCAACAATGTTCATGGTTAAACCAGAATCCCCCTGTGCATATACCTTCTTTGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: PATMFMVKPESPCAYTFFGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...AAAGAAGGTATATGCACAGGGGGATTCTGGTTTAACCATGAACATTGTTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDRKGYP*RRMWAS
Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGAAAGCCCACAAGTCTTaGGGACTCCCGGGATACCAC +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQKAHKS*GLPGYH
Trigger: GTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCTCCAGGCAACTGATTaGCTCTGTCGCCGAGGTCCG +
Preference number: 5 (lower is better)
Translates to: MATSYSYLENPNSVETLILQATD*LCRRGP
Trigger: CGGACCTCGGCGACAGAGCAAATCAGTTGCCTGGAG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCCTATTCCTCCACCATaGTACGACTTGTCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDPIPPP*YDLSSP
Trigger: AGGAGAGGACAAGTCGTACAATGGTGGAGGAATAGG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGGGTATCAAAGGGATATaGTCATTCTCTGGAGGGCCA +
Preference number: 5 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLGIKGI*SFSGGP
Trigger: TGGCCCTCCAGAGAATGACAATATCCCTTTGATACC...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATATGGGTGGCTTGCATTaGGCTCTGATCCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDMGGLH*ALIQCR
Trigger: CCTGCACTGGATCAGAGCCAAATGCAAGCCACCCAT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCAAGTATCAATGGCTTaGGCCCTCACAGAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDQVSMA*ALTEEQ
Trigger: TTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTTG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTACTCTCTTCTCGATTTaGCCAGATGGCATTTCACTC +
Preference number: 5 (lower is better)
Translates to: PKRCFPASSELMGGLHLATLFSI*PDGISL
Trigger: GAGTGAAATGCCATCTGGCAAAATCGAGAAGAGAGT...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTACTTCCTGCGGAAACTaGGGCTCTATTAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGTSCGN*GSISFG
Trigger: ACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTCCACCATTGTACGACTaGTCCTCTGGAGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGPPLYD*SSGVEM
Trigger: CATTTCTACTCCAGAGGACAAGTCGTACAATGGTGG...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGATAACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGITSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTTAT...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAACTGGAGGCAGAAATaGGGCCTTCATGCCAAAGGT +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHNWRQK*GLHAKG
Trigger: ACCTTTGGCATGAAGGCCCAATTTCTGCCTCCAGTT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642383.1
CDS-3UTR CAA 90 bp CACAGTCATACTGTCCTGAGTAAGGACAGTCAACAAAGGATCATTTCTCCGGGGGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: HSHTVLSKDSQQRIISPGDSLLL*VISRCL
Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...CCCCGGAGAAATGATCCTTTGTTGACTGTCCTTACTCAGGACAGTATGACTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AATGCTGCCACCAAGGCAGCAAAGAATGAACGCCACAATGTTTTGAGGGGAAAATTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: NAATKAAKNERHNVLRGKFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...TTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTCATCTGTGCTGATGATAAGCTGGGACCAACTATTCCACTCTGGACATTTGTCTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: LICADDKLGPTIPLWTFVSFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...GACAAATGTCCAGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCACAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR CAA 90 bp GGGTTTCATCACATCCATTGCCAGGGTCTTATGAGCAAACTCTTCTTTGGCTTCCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: GFHHIHCQGLMSKLFFGFLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...GAAGCCAAAGAAGAGTTTGCTCATAAGACCCTGGCAATGGATGTGATGAAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AATGCTGCCACCAAGGCAGCAAAGAATGAACGCCACAATGTTTTGAGGGGAAAATCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: NAATKAAKNERHNVLRGKSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...TTTTCCCCTCAAAACATTGTGGCGTTCATTCTTTGCTGCCTTGGTGGCAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLRKGYP*RRMWAS
Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGAAAGCCCACAAGTCTTaGGGACTCCCGGGATACCAC +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILKAHKS*GLPGYH
Trigger: GTGGTATCCCGGGAGTCCCAAAGACTTGTGGGCTTT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCCACATGGCCATCTaGATCCTATCTTCACCCACG +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDCHMAI*ILSSPT
Trigger: CGTGGGTGAAGATAGGATCAAGATGGCCATGTGGCA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCCACCATTGTACGACTaGTCCTCTCCTACTTCTCGG +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDPPLYD*SSPTSR
Trigger: CCGAGAAGTAGGAGAGGACAAGTCGTACAATGGTGG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTCCTATTCCTCCACCATaGTACGACTTGTCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLPIPPP*YDLSSP
Trigger: AGGAGAGGACAAGTCGTACAATGGTGGAGGAATAGG...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTGGTGTCACCAGGCCTaGTCCATACCCCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFWCHQA*SIPLCL
Trigger: AAGACACAGGGGTATGGACAAGGCCTGGTGACACCA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTATGGATACAAGCACCTTaGGTGTCACCAGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLWIQAP*VSPGLV
Trigger: GACAAGGCCTGGTGACACCAAAGGTGCTTGTATCCA...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGGATACAAGCACCTTaGGTGTCACCAGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQWIQAP*VSPGLV
Trigger: GACAAGGCCTGGTGACACCAAAGGTGCTTGTATCCA...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCCAAAAGATGTTTTCCTGCTTCCTCTGAACTGATGGGTGGCTTGCATTTGGCTTACTGGCTGTATTTGTaGCTTAAGCATGTCCAACTG +
Preference number: 5 (lower is better)
Translates to: PKRCFPASSELMGGLHLAYWLYL*LKHVQL
Trigger: CAGTTGGACATGCTTAAGCAACAAATACAGCCAGTA...AGCCAAATGCAAGCCACCCATCAGTTCAGAGGAAGCAGGAAAACATCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGAGGTATGTGGCCATTaGATGCTACTGACAGTCCTC +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMEVCGH*MLLTVL
Trigger: GAGGACTGTCAGTAGCATCAAATGGCCACATACCTC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGAACTGATGGGTGGCTaGCATTTGGCTCTGATCCAG +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDELMGG*HLALIQ
Trigger: CTGGATCAGAGCCAAATGCAAGCCACCCATCAGTTC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGCAAGTATCAATGGCTTaGGCCCTCACAGAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQQVSMA*ALTEEQ
Trigger: TTGCTCCTCTGTGAGGGCCAAAGCCATTGATACTTG...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGATCTTCCTGGCCTCATaGGCTCACTCAACAGGTGGT +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQIFLAS*AHSTGG
Trigger: ACCACCTGTTGAGTGAGCCAATGAGGCCAGGAAGAT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCTTTGGCTACTGCAGTaGGAGCCAGCCCTACAAAGA +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQLWLLQ*EPALQR
Trigger: TCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AAGGACAGTCAACAAAGGATCATTTCTCCGGGGTTTCATCACATCCATTGCCAGAACACAAATGGCAACTaGAACAAGCTGCTGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KDSQQRIISPGFHHIHCQNTNGN*NKLLKA
Trigger: AGCCTTCAGCAGCTTGTTCAAGTTGCCATTTGTGTT...CTGGCAATGGATGTGATGAAACCCCGGAGAAATGATCCTTTGTTGACTGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp CTCTTTGCTTTTATTGGTAATCTCTCGGTGCCTATCCCGGTCTCGAGACTTCTCGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: LFAFIGNLSVPIPVSRLLELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...GAGAAGTCTCGAGACCGGGATAGGCACCGAGAGATTACCAATAAAAGCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGTKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTCATCTGTGCTGATGATAAGCTGGGACCAACTATTCCACTCTGGACATTTGTCACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: LICADDKLGPTIPLWTFVTKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...GACAAATGTCCAGAGTGGAATAGTTGGTCCCAGCTTATCATCAGCACAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLSFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR CAA 90 bp CATTTGTCTCTCTCTTCAAAGGTGACATGCTCAGAGTTCCAGCAACAATGTTCAAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: HLSLSSKVTCSEFQQQCSKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...TGAACATTGTTGCTGGAACTCTGAGCATGTCACCTTTGAAGAGAGAGACAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATATCCGAGTGTATTCATaGGGGAAAGCCAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDIRVYS*GKARMA
Trigger: TGCCATCCTGGCTTTCCCCAATGAATACACTCGGAT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAGGCAGTTCACCCCCTTaGCTTGTGTTGAAACGGTTC +
Preference number: 5 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIGSSPP*LVLKRF
Trigger: GAACCGTTTCAACACAAGCAAAGGGGGTGAACTGCC...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGAATGGAATCAGGATCTaGGTTCGCCATCTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLNGIRI*VRHLCY
Trigger: ATAGCACAGATGGCGAACCAAGATCCTGATTCCATT...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAATGGAATCAGGATCTaGGTTCGCCATCTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHNGIRI*VRHLCY
Trigger: ATAGCACAGATGGCGAACCAAGATCCTGATTCCATT...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAATGGAATCAGGATCTaGGTTCGCCATCTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDNGIRI*VRHLCY
Trigger: ATAGCACAGATGGCGAACCAAGATCCTGATTCCATT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGGGAAAATTACCGTTTTaGCAGACAAGGAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLGKLPF*QTRRKL
Trigger: GAGCTTTCTCCTTGTCTGCAAAAACGGTAATTTTCC...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCCAGGCACCTTTTCAATaGGATACAAGCACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: DIVILWRANRCLASTKYTQAPFQ*DTSTFG
Trigger: ACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTG...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TCATGGGGACAACACACTGGCCTGTTACACATACTTATCGCTGGGAGGTACAATAAAGGTGGTATGAAATaGAGACAGGCACCTTTTCAA +
Preference number: 5 (lower is better)
Translates to: SWGQHTGLLHILIAGRYNKGGMK*RQAPFQ
Trigger: TTGAAAAGGTGCCTGTCTCAATTTCATACCACCTTT...ATTGTACCTCCCAGCGATAAGTATGTGTAACAGGCCAGTGTGTTGTCCCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTCCCAAACAGAGGATTaGGTACTAAGGAGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGSQTED*VLRSKK
Trigger: CTTCTTACTCCTTAGTACCAAATCCTCTGTTTGGGA...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCAAAGGAAATGGCTGTGTGTCACCTCTGGTCCATGTGTTGTGAGACTGCTTCTACAAAGTATACCTaGGCACAGTGTTATCTGATT +
Preference number: 5 (lower is better)
Translates to: MAKEMAVCHLWSMCCETASTKYT*AQCYLI
Trigger: AATCAGATAACACTGTGCCAAGGTATACTTTGTAGA...AGCAGTCTCACAACACATGGACCAGAGGTGACACACAGCCATTTCCTTTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGCAATTAGCCAACCTTaGAGCCAAACCATAGGACTG +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMAISQP*SQTIGL
Trigger: CAGTCCTATGGTTTGGCTCAAAGGTTGGCTAATTGC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCAGGCCTTGAAAGTTGCCATTATTTaGTATTATCAGTCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: ETGTFSIGYKHLWCHQALKVAII*YYQSPA
Trigger: AGCAGGGGACTGATAATACAAAATAATGGCAACTTT...CAAGGCCTGGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCCCTTTGAAGCATTGCTaGACTTTTTCTCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCPLKHC*TFSPLE
Trigger: CTCAAGGGGAGAAAAAGTCAAGCAATGCTTCAAAGG...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACCTGGCCTTTGAAGCATaGCTTGACTTTTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: ETWALLALVEATFWMPSYLAFEA*LDFFSP
Trigger: AGGGGAGAAAAAGTCAAGCAATGCTTCAAAGGCCAG...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCCTGGCCTTTGAAGCATaGCTTGACTTTTTCTCCCCT +
Preference number: 5 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTLAFEA*LDFFSP
Trigger: AGGGGAGAAAAAGTCAAGCAATGCTTCAAAGGCCAG...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GGATCAGCAACTCTTAAAATGAGGTACACTGAAGTGTTTGGGGGTAGAGGGTTGGGGAGTAACTTAAAGTaGCTAACACCCATTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GSATLKMRYTEVFGGRGLGSNLK*LTPIVL
Trigger: GAGAACAATGGGTGTTAGCAACTTTAAGTTACTCCC...CAACCCTCTACCCCCAAACACTTCAGTGTACCTCATTTTAAGAGTTGCTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACACTCTCTTCTCGATTTaGCCAGATGGCATTTCACTC +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDTLFSI*PDGISL
Trigger: GAGTGAAATGCCATCTGGCAAAATCGAGAAGAGAGT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAATCTTCCTGGCCTCATaGGCTCACTCAACAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIIFLAS*AHSTGG
Trigger: ACCACCTGTTGAGTGAGCCAATGAGGCCAGGAAGAT...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGACTTCCTGCGGAAACTaGGGCTCTATTAGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQTSCGN*GSISFG
Trigger: ACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGCTTTAGAAGGGCACTaGCTGCATTCTCTGCCTTTC +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDALEGH*LHSLPF
Trigger: GAAAGGCAGAGAATGCAGCAAGTGCCCTTCTAAAGC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAAGGAAGAAATAACCTaGGCAGCCCGCATTTGGTCA +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMKEEIT*AARIWS
Trigger: TGACCAAATGCGGGCTGCCAAGGTTATTTCTTCCTT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CAA 90 bp GGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGCTCCTATTCCTCCACCATaGTACGACTTGTCCTCTGTA +
Preference number: 5 (lower is better)
Translates to: GQDGWNFSCIVFSDCILAPIPPP*YDLSSV
Trigger: TACAGAGGACAAGTCGTACAATGGTGGAGGAATAGG...AGCCAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDTKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMSFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GAAACTTGGGCTCTATTAGCTTTGGTTGAAGCTACTTTCTGGATGCCTAGTTACTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: ETWALLALVEATFWMPSYSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...GTAACTAGGCATCCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGAGAAAGGGGTATCCATaGAGACGGATGTGGGCATCA +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILRKGYP*RRMWAS
Trigger: TGATGCCCACATCCGTCTCAATGGATACCCCTTTCT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGAATGGAATCAGGATCTaGGTTCGCCATCTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMNGIRI*VRHLCY
Trigger: ATAGCACAGATGGCGAACCAAGATCCTGATTCCATT...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTAATGGAATCAGGATCTaGGTTCGCCATCTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLNGIRI*VRHLCY
Trigger: ATAGCACAGATGGCGAACCAAGATCCTGATTCCATT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: FRRFPTGYRSGRLEFLLHYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...ATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCGTATGCAGTCTAGACTaGGTTCCCTTTGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCVCSLD*VPFAVF
Trigger: AAAAACAGCAAAGGGAACCAAGTCTAGACTGCATAC...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAAAGAAAGAGGAGAGCATaGGAATATGTTTCTAACCAA +
Preference number: 5 (lower is better)
Translates to: QLSTKLPAETWALLALVERKRRA*EYVSNQ
Trigger: TTGGTTAGAAACATATTCCAATGCTCTCCTCTTTCT...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTTGCGTTCATAAGATCTaGGTTGTGAATTACTTCACG +
Preference number: 5 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGCVHKI*VVNYFT
Trigger: CGTGAAGTAATTCACAACCAAGATCTTATGAACGCA...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGCCTTTGAAGCATTGCTaGACTTTTTCTCCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMPLKHC*TFSPLE
Trigger: CTCAAGGGGAGAAAAAGTCAAGCAATGCTTCAAAGG...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTCAGAAATTCTCTCCTaGGAGCAAGCAACTGAAATA +
Preference number: 5 (lower is better)
Translates to: SQKSDFFVGFLQVIGQDGSEILS*EQATEI
Trigger: TATTTCAGTTGCTTGCTCCAAGGAGAGAATTTCTGA...ACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTCTTTGGCTACTGCAGTaGGAGCCAGCCCTACAAAGA +
Preference number: 5 (lower is better)
Translates to: MATSYSYLENPNSVETLILWLLQ*EPALQR
Trigger: TCTTTGTAGGGCTGGCTCCAACTGCAGTAGCCAAAG...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CAGCTCAGCACCAAACTTCCTGCGGAAACTTGGGCTCTATTAGCTTTGGTTGAACTTGCTTTGAATTCATaGTCTCAGTTTATCCTCACA +
Preference number: 5 (lower is better)
Translates to: QLSTKLPAETWALLALVELALNS*SQFILT
Trigger: TGTGAGGATAAACTGAGACAATGAATTCAAAGCAAG...TTCAACCAAAGCTAATAGAGCCCAAGTTTCCGCAGGAAGTTTGGTGCTGAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCCTATTCCTCCACCATaGTACGACTTGTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDPIPPP*YDLSSS
Trigger: TGAAGAGGACAAGTCGTACAATGGTGGAGGAATAGG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACTTTAATACATTCTTTTaGGTTCCAAAAGGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDFNTFF*VPKGGP
Trigger: GGGCCCGCCTTTTGGAACCAAAAAGAATGTATTAAA...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS GCA 90 bp GAAGTCACAATTGGTTCACAGTTATTCAGCAGCTGCAAGTATTCATaGAATAGGTATTTAGAGTCTCTCGTACCCTGTGTCCTACTCCAT +
Preference number: 5 (lower is better)
Translates to: EVTIGSQLFSSCKYS*NRYLESLVPCVLLH
Trigger: ATGGAGTAGGACACAGGGTACGAGAGACTCTAAATACCTATTGCATGAATACTTGCAGCTGCTGAATAACTGTGAACCAATTGTGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLDSLLL*VISRCL
Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLTKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDSFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDSFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGAAGACCTCTCTGCGCTaGGCTTCATTCTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILKTSLR*ASFFLY
Trigger: ATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTCTT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTCTATAACAGGATACTaGCCCAACTGGGTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDSITGY*PNWVVF
Trigger: AAAGACCACCCAGTTGGGCAAGTATCCTGTTATAGA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAATGGAATCAGGATCTaGGTTCGCCATCTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDNGIRI*VRHLCY
Trigger: ATAGCACAGATGGCGAACCAAGATCCTGATTCCATT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp CTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGGGAAGAAATCATTCCTaGCTACTAACAAATTCACGG +
Preference number: 5 (lower is better)
Translates to: LFRRFPTGYRSGRLEFLLGRNHS*LLTNSR
Trigger: CCGTGAATTTGTTAGTAGCAAGGAATGATTTCTTCC...CAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATAACACAAAAGCAAACTaGAGACACCCTCCTTATCGC +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDNTKAN*RHPPYR
Trigger: GCGATAAGGAGGGTGTCTCAAGTTTGCTTTTGTGTT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACCTATACTGGCTGTATTaGTTGCTTAAGCATGTCCAA +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDLYWLY*LLKHVQ
Trigger: TTGGACATGCTTAAGCAACAAATACAGCCAGTATAG...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTGAGGTATGTGGCCATTaGATGCTACTGACAGTCCTC +
Preference number: 5 (lower is better)
Translates to: MATSYSYLENPNSVETLIEVCGH*MLLTVL
Trigger: GAGGACTGTCAGTAGCATCAAATGGCCACATACCTC...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GCATATGCAGTTCTGAGTCTTCCCTGGTTTACCAGTATGCAGTCTAGACTTGGTAAAGTTGCCATTATTTaGTATTATCAGTCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: AYAVLSLPWFTSMQSRLGKVAII*YYQSPA
Trigger: AGCAGGGGACTGATAATACAAAATAATGGCAACTTT...ACCAAGTCTAGACTGCATACTGGTAAACCAGGGAAGACTCAGAACTGCATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCTGCGTTCATAAGATCTaGGTTGTGAATTACTTCACG +
Preference number: 5 (lower is better)
Translates to: FFVGFLQVIGQDGWNFSCCVHKI*VVNYFT
Trigger: CGTGAAGTAATTCACAACCAAGATCTTATGAACGCA...GCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTCAGAAATTCTCTCCTaGGAGCAAGCAACTGAAATA +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNSEILS*EQATEI
Trigger: TATTTCAGTTGCTTGCTCCAAGGAGAGAATTTCTGA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGGGCTCTATTAGCTTaGGTTGAAGCTACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQWALLA*VEATFW
Trigger: CCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCA...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATCCACCATTGTACGACTaGTCCTCTTCAATCACAGTT +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDPPLYD*SSSITV
Trigger: AACTGTGATTGAAGAGGACAAGTCGTACAATGGTGG...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376108.7
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATCCACCATTGTACGACTaGTCCTCTGTATTGAACAAG +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDPPLYD*SSVLNK
Trigger: CTTGTTCAATACAGAGGACAAGTCGTACAATGGTGG...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDDSLLL*VISRCL
Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGACTCTTTGCTTTTATaGGTAATCTCTCGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDDSLLL*VISRCL
Trigger: TAGGCACCGAGAGATTACCAATAAAAGCAAAGAGTC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATGAAATTGAGACAGGCACCTTTTCAATTGGATACAAGCACCTTTGGTGTCACCGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: MKLRQAPFQLDTSTFGVTELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...GGTGACACCAAAGGTGCTTGTATCCAATTGAAAAGGTGCCTGTCTCAATTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: TTYPWSVMSFPLYIQNSMELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...CATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000376108.7
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATTTTAGTACTGGTGGTCTTTACAAAGGAATGCATGAGGATGCATATGCAGTTCTTCTTCCTGTATTTGTaGAAGCAGTGGCACAGGATG +
Preference number: 5 (lower is better)
Translates to: ILVLVVFTKECMRMHMQFFFLYL*KQWHRM
Trigger: CATCCTGTGCCACTGCTTCAACAAATACAGGAAGAA...GAACTGCATATGCATCCTCATGCATTCCTTTGTAAAGACCACCAGTACTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCISFFLY*LKQWHR
Trigger: CCTGTGCCACTGCTTCAACAAATACAGGAAGAATGA...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGCTGTTCCCAAATGGATaGATGGAGCGTAGAGTGAAT +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILLFPNG*MERRVN
Trigger: ATTCACTCTACGCTCCATCAATCCATTTGGGAACAG...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGGTTTCATCACATCCATaGCCAGGGTCTTATGAGCAA +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILVSSHP*PGSYEQ
Trigger: TTGCTCATAAGACCCTGGCAATGGATGTGATGAAAC...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp TTTCACCAACTCTCAGGCATTAAAATGTCGAGTCAGACAGGTTTTCTTTGGCTATATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: FHQLSGIKMSSQTGFLWLYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...TAGCCAAAGAAAACCTGTCTGACTCGACATTTTAATGCCTGAGAGTTGGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATGGAAAATTACCGTTTTaGCAGACAAGGAGAAAGCTC +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDGKLPF*QTRRKL
Trigger: GAGCTTTCTCCTTGTCTGCAAAAACGGTAATTTTCC...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATTCCCAAACAGAGGATTaGGTACTAAGGAGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDSQTED*VLRSKK
Trigger: CTTCTTACTCCTTAGTACCAAATCCTCTGTTTGGGA...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AAGGGTTTAGATTCAGCCTCTGGTGTCAAAACAATTCAACTGCTTTTCAGTTCAAAACCATCTAGTCTTTaGCCATTGAGGTATGTGGCC +
Preference number: 5 (lower is better)
Translates to: KGLDSASGVKTIQLLFSSKPSSL*PLRYVA
Trigger: GGCCACATACCTCAATGGCAAAAGACTAGATGGTTT...TGAACTGAAAAGCAGTTGAATTGTTTTGACACCAGAGGCTGAATCTAAACCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGACCAGCTACTCTTACTaGGAAAATCCTAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: PVNTTYPWSVMSFPLYIQTSYSY*ENPNSV
Trigger: AACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGT...CTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AGATCCCAAAAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACAGAAAGAGGAGAGCATaGGAATATGTTTCTAACCAA +
Preference number: 5 (lower is better)
Translates to: RSQKSDFFVGFLQVIGQDRKRRA*EYVSNQ
Trigger: TTGGTTAGAAACATATTCCAATGCTCTCCTCTTTCT...GTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTTTTGGGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGGGAGTAACTTAAAGTaGCTAACACCCATTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDGSNLK*LTPIVL
Trigger: GAGAACAATGGGTGTTAGCAACTTTAAGTTACTCCC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTCTTTCTTGGGTGATTaGGCAAAATTAGACTACACC +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSFLGD*AKLDYT
Trigger: GGTGTAGTCTAATTTTGCCAAATCACCCAAGAAAGA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp AAGAGTGACTTTTTCGTCGGTTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTGCATAGCACTTACTaGTCAACTTGCTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: KSDFFVGFLQVIGQDGWNLHSTY*STCFEF
Trigger: GAATTCAAAGCAAGTTGACAAGTAAGTGCTATGCAA...ATTCCAACCGTCCTGACCTATAACCTGTAGGAAACCGACGAAAAAGTCACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GATATTGTCATTCTCTGGAGGGCCAATCGGTGCTTAGCATCTACAAAGTATACCTTGCATAGCACTTACTaGTCAACTTGCTTTGAATTC +
Preference number: 5 (lower is better)
Translates to: DIVILWRANRCLASTKYTLHSTY*STCFEF
Trigger: GAATTCAAAGCAAGTTGACAAGTAAGTGCTATGCAA...GGTATACTTTGTAGATGCTAAGCACCGATTGGCCCTCCAGAGAATGACAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATGAATTAAGGCCCATGTaGACTCTTTGCTTTTATTGG +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDELRPM*TLCFYW
Trigger: CCAATAAAAGCAAAGAGTCAACATGGGCCTTAATTC...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILTKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTATAGGTCAGGACGGTaGGAATTTCTCTTGCATAGT +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILYRSGR*EFLLHS
Trigger: ACTATGCAAGAGAAATTCCAACCGTCCTGACCTATA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307367.2
ENST00000376088.7
ENST00000376091.8
ENST00000642383.1
ENST00000642885.1
ENST00000643129.1
ENST00000646398.1
CDS-3UTR CAA 90 bp GTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATAGTATGCAGTCTAGACTaGGTTCCCTTTGCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: VIGQDGWNFSCIVFSDCIVCSLD*VPFAVF
Trigger: AAAAACAGCAAAGGGAACCAAGTCTAGACTGCATAC...TATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTAAACCATCTAGTCTTTaGCCATTGAGGTATGTGGCC +
Preference number: 5 (lower is better)
Translates to: MATSYSYLENPNSVETLIKPSSL*PLRYVA
Trigger: GGCCACATACCTCAATGGCAAAAGACTAGATGGTTT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATACCAGCTACTCTTACTaGGAAAATCCTAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDTSYSY*ENPNSV
Trigger: AACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTGGGTACCCAGTTAATACAACATATCCATGGTCTGTAATGTCCTTCCCGCTTTCACAAATTAATCGTTaGCTTCACCAGCTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: FGYPVNTTYPWSVMSFPLSQINR*LHQLVN
Trigger: ATTTACCAGCTGGTGAAGCAAACGATTAATTTGTGA...AAGCGGGAAGGACATTACAGACCATGGATATGTTGTATTAACTGGGTACCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTCTTTCTTGGGTGATTaGGCAAAATTAGACTACACC +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDSFLGD*AKLDYT
Trigger: GGTGTAGTCTAATTTTGCCAAATCACCCAAGAAAGA...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTTGGGCTCTATTAGCTTaGGTTGAAGCTACTTTCTGG +
Preference number: 5 (lower is better)
Translates to: MATSYSYLENPNSVETLIWALLA*VEATFW
Trigger: CCAGAAAGTAGCTTCAACCAAAGCTAATAGAGCCCA...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp CTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATATGCTCCAGTTGAATTaGCTCTGGTTTAAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LQVIGQDGWNFSCIVFSDMLQLN*LWFKSS
Trigger: AGAACTCTTAAACCAGAGCAAATTCAACTGGAGCAT...ATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642885.1
CDS-3UTR CAA 90 bp AACATATCCATGGTCTGTAATGTCCTTCCCGCTTTACATCCAGAACTCTATGATAGGTTAATGCTCCAGTaGAATTTGCTCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: NISMVCNVLPALHPELYDRLMLQ*NLLWFK
Trigger: CTTAAACCAGAGCAAATTCAACTGGAGCATTAACCT...ATCATAGAGTTCTGGATGTAAAGCGGGAAGGACATTACAGACCATGGATATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642885.1
CDS-3UTR CAA 90 bp ATGGCTACCAGCTACTCTTACTTGGAAAATCCTAACTCTGTTGAAACACTAATTACCAAGGTGATGGTTTaGATAACCAGAGTCCACTTA +
Preference number: 5 (lower is better)
Translates to: MATSYSYLENPNSVETLITKVMV*ITRVHL
Trigger: TAAGTGGACTCTGGTTATCAAAACCATCACCTTGGT...AATTAGTGTTTCAACAGAGTTAGGATTTTCCAAGTAAGAGTAGCTGGTAGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp TTTCCTACAGGTTATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGCTTGCTTTGAATTCATaGTCTCAGTTTATCCTCACA +
Preference number: 5 (lower is better)
Translates to: FPTGYRSGRLEFLLHSFQLALNS*SQFILT
Trigger: TGTGAGGATAAACTGAGACAATGAATTCAAAGCAAG...CTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTATAACCTGTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCAGGAAGAAATCATTCCTaGCTACTAACAAATTCACGG +
Preference number: 5 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSGRNHS*LLTNSR
Trigger: CCGTGAATTTGTTAGTAGCAAGGAATGATTTCTTCC...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp ATAGGTCAGGACGGTTGGAATTTCTCTTGCATAGTTTTCAGTGATTGCATATTGTCTACAAAGTATACCTaGGCACAGTGTTATCTGATT +
Preference number: 5 (lower is better)
Translates to: IGQDGWNFSCIVFSDCILSTKYT*AQCYLI
Trigger: AATCAGATAACACTGTGCCAAGGTATACTTTGTAGA...CAATATGCAATCACTGAAAACTATGCAAGAGAAATTCCAACCGTCCTGACCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS-3UTR CAA 90 bp GGCAATATAAAATATGCTGGCTGTTTCAAGTTCTCACCATTGTCTTTGCTATCATCACAAATTAATCGTTaGCTTCACCAGCTGGTAAAT +
Preference number: 5 (lower is better)
Translates to: GNIKYAGCFKFSPLSLLSSQINR*LHQLVN
Trigger: ATTTACCAGCTGGTGAAGCAAACGATTAATTTGTGA...TGATAGCAAAGACAATGGTGAGAACTTGAAACAGCCAGCATATTTTATATTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS CCA 72 bp GAGGTCCGGAGCGGCGGAGCCCGTGTCCGCCGCCGGTaGGCAGCGCGCTCGGTCGGCTCTGGCGTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: EVRSGGARVRRR*AARSVGSGVQD
Trigger: GTCCTGGACGCCAGAGCCGACCGAGCGCGCTGCCCACCGGCGGCGGACACGGGCTCCGCCGCTCCGGACCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS TCA 72 bp CGCGCTCGGTCGGCTCTGGCGTCCAGGACACCAAGTTaGGTGAGCGCCCCACGTAGCCGGCAGAGCTTCATT +
Preference number: 6 (lower is better)
Translates to: RARSALASRTPS*VSAPRSRQSFI
Trigger: AATGAAGCTCTGCCGGCTACGTGGGGCGCTCACTCAACTTGGTGTCCTGGACGCCAGAGCCGACCGAGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS TCA 72 bp CTCGGTCGGCTCTGGCGTCCAGGACACCAAGTTGAGTaGGCGCCCCACGTAGCCGGCAGAGCTTCATTCACA +
Preference number: 6 (lower is better)
Translates to: LGRLWRPGHQVE*APHVAGRASFT
Trigger: TGTGAATGAAGCTCTGCCGGCTACGTGGGGCGCTCACTCAACTTGGTGTCCTGGACGCCAGAGCCGACCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS CAA 72 bp CCTCTGTTATCCATGGCACCCTGCCACATGGCCATCTaGATCCTATCTTCACCCACGCTGGGGTCACAGGCT +
Preference number: 6 (lower is better)
Translates to: PLLSMAPCHMAI*ILSSPTLGSQA
Trigger: AGCCTGTGACCCCAGCGTGGGTGAAGATAGGATCAAGATGGCCATGTGGCAGGGTGCCATGGATAACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000482218.2
CDS CCA 72 bp ACTGACGTTATCGCACGGGCACAGGTACAACTTCACTaGGAACTCCAGGCAACTGATTTGCTCTGTCGCCGA +
Preference number: 6 (lower is better)
Translates to: TDVIARAQVQLH*ELQATDLLCRR
Trigger: TCGGCGACAGAGCAAATCAGTTGCCTGGAGTTCCCAGTGAAGTTGTACCTGTGCCCGTGCGATAACGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS TCA 72 bp TCTAGATTTCCCTCACTTACTCGGGGCAGCTTCCACTaGCGTTATCGCACGGGCACAGGTACAACTTCACTG +
Preference number: 6 (lower is better)
Translates to: SRFPSLTRGSFH*RYRTGTGTTSL
Trigger: CAGTGAAGTTGTACCTGTGCCCGTGCGATAACGTCAGTGGAAGCTGCCCCGAGTAAGTGAGGGAAATCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376088.7
CDS TCA 72 bp CTGGAGCTGTTCTGGAAGCTACTAAAACTCCCCTGCTaGAAGCCTCTGTTATCCATGGCACCCTGCCACATG +
Preference number: 6 (lower is better)
Translates to: LELFWKLLKLPC*KPLLSMAPCHM
Trigger: CATGTGGCAGGGTGCCATGGATAACAGAGGCTTTCAGCAGGGGAGTTTTAGTAGCTTCCAGAACAGCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000482218.2
CDS CAA 90 bp CCATGCCCAATAACCTCTCTGCGCTTGGCTTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGGATGTTCCCACAGCAGCAAGCCACG +
Preference number: 6 (lower is better)
Translates to: PCPITSLRLASFFLY*LKQWHRMFPQQQAT
Trigger: CGTGGCTTGCTGCTGTGGGAACATCCTGTGCCACTGCTTCAACAAATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTTATTGGGCATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS CCA 72 bp AGGCAAGAGCCTGAACTCTCCAGACCAACACAGAACTaGAGGCAGAAATTGGGCCTTCATGCCAAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: RQEPELSRPTQN*RQKLGLHAKGE
Trigger: TTCACCTTTGGCATGAAGGCCCAATTTCTGCCTCCAGTTCTGTGTTGGTCTGGAGAGTTCAGGCTCTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642383.1
CDS CAA 72 bp GGTAGGAATGCAAAATGGTATAGCCACTTTGGCACTTaGGCAGACAGTTTGGTGGCACTCCTACTTCTCGGT +
Preference number: 6 (lower is better)
Translates to: GRNAKWYSHFGT*ADSLVALLLLG
Trigger: ACCGAGAAGTAGGAGTGCCACCAAACTGTCTGCCAAAGTGCCAAAGTGGCTATACCATTTTGCATTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS CAA 72 bp ATAACCTCTCTGCGCTTGGCTTCATTCTTCCTGTATTaGTTGAAGCAGTGGCACAGGATGTTCCCACAGCAG +
Preference number: 6 (lower is better)
Translates to: ITSLRLASFFLY*LKQWHRMFPQQ
Trigger: CTGCTGTGGGAACATCCTGTGCCACTGCTTCAACAAATACAGGAAGAATGAAGCCAAGCGCAGAGAGGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS CAA 90 bp TTCATAGCTGGTAGGAATGCAAAATGGTATAGCCACTTTGGCACTTaGGCAGACAGTTTGGTGGCACTCCTACTTCTCGGTCTAAGGGAG +
Preference number: 6 (lower is better)
Translates to: FIAGRNAKWYSHFGT*ADSLVALLLLGLRE
Trigger: CTCCCTTAGACCGAGAAGTAGGAGTGCCACCAAACTGTCTGCCAAAGTGCCAAAGTGGCTATACCATTTTGCATTCCTACCAGCTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS GCA 72 bp AGGAACATCATCTCTCATGGAGAAATCCATAGCGGTTaGTGGAATGTCCATCAGGTCTTCATCACTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RNIISHGEIHSG*WNVHQVFITGA
Trigger: AGCTCCAGTGATGAAGACCTGATGGACATTCCAGCAACCGCTATGGATTTCTCCATGAGAGATGATGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000482218.2
ENST00000643129.1
CDS CCA 72 bp AACATCATCTCTCATGGAGAAATCCATAGCGGTTGCTaGAATGTCCATCAGGTCTTCATCACTGGAGCTGTT +
Preference number: 6 (lower is better)
Translates to: NIISHGEIHSGC*NVHQVFITGAV
Trigger: AACAGCTCCAGTGATGAAGACCTGATGGACATTCCAGCAACCGCTATGGATTTCTCCATGAGAGATGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376088.7
ENST00000376091.8
ENST00000482218.2
ENST00000643129.1
CDS CCA 72 bp CAGGAACTCTCATTCATAGCTGGTAGGAATGCAAAATaGTATAGCCACTTTGGCACTTTGGCAGACAGTTTG +
Preference number: 6 (lower is better)
Translates to: QELSFIAGRNAK*YSHFGTLADSL
Trigger: CAAACTGTCTGCCAAAGTGCCAAAGTGGCTATACCATTTTGCATTCCTACCAGCTATGAATGAGAGTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643129.1
CDS CAA 72 bp TCCATGATCCTATTTGAAGAACCTATTCCTCCACCATaGTACGACTTGTCCTCTCCTACTTCTCGGTCTAAG +
Preference number: 6 (lower is better)
Translates to: SMILFEEPIPPP*YDLSSPTSRSK
Trigger: CTTAGACCGAGAAGTAGGAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376088.7
ENST00000376091.8
CDS CAA 72 bp TCCATGATCCTATTTGAAGAACCTATTCCTCCACCATaGTACGACTTGTCCTCTGGTAGGAACATCCATTAC +
Preference number: 6 (lower is better)
Translates to: SMILFEEPIPPP*YDLSSGRNIHY
Trigger: GTAATGGATGTTCCTACCAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307367.2
CDS GCA 72 bp ATTGGTTCACAGTTATTCAGCAGCTGCAAGTATTCATaGAATAGGTATTTAGAGTCTCTCGTACCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: IGSQLFSSCKYS*NRYLESLVPCV
Trigger: GACACAGGGTACGAGAGACTCTAAATACCTATTGCATGAATACTTGCAGCTGCTGAATAACTGTGAACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646398.1
CDS CAA 72 bp TCCATGATCCTATTTGAAGAACCTATTCCTCCACCATaGTACGACTTGTCCTCTTCAATCACAGTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: SMILFEEPIPPP*YDLSSSITVFF
Trigger: AAAGAAAACTGTGATTGAAGAGGACAAGTCGTACAATGGTGGAGGAATAGGTTCTTCAAATAGGATCATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376108.7