RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLCN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000073464

Ensembl transcript IDs: ENST00000380829.5, ENST00000380833.9, ENST00000421085.7, ENST00000454850.1, ENST00000674669.1, ENST00000674959.1, ENST00000675144.1, ENST00000675769.1

Found 685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCTCCTTGATGAGCGTCTCCACGTCCTCGACAGTCATGCTGTCCTaGGTGAGCACCGACAGTGGCGGCTCTCCCCGCCGGGGCCGCATG +
Preference number: 1 (lower is better)
Translates to: VSLMSVSTSSTVMLS*VSTDSGGSPRRGRM
Trigger: CATGCGGCCCCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACCCAGGACAGCATGACTGTCGAGGACGTGGAGACGCTCATCAAGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 90 bp CGTCATCCTGGTAACTCCACCGAGGCAGGCCGCAGCTCCCACCATTaGGTACAGCCCTGGCGTGACACAGTCTGCACCGGGTCTGCACCA +
Preference number: 1 (lower is better)
Translates to: RHPGNSTEAGRSSHH*VQPWRDTVCTGSAP
Trigger: TGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCTCGGTGGAGTTACCAGGATGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 90 bp CCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTaGTGTACGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTG +
Preference number: 1 (lower is better)
Translates to: PSRPGLLPTVVGPRG*CTEGIDVLKGQGRL
Trigger: CAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR CCA 90 bp AACTCCACCGAGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTaGCGTGACACAGTCTGCACCGGGTCTGCACCAGTTCCTGAAGAT +
Preference number: 1 (lower is better)
Translates to: NSTEAGRSSHHCVQP*RDTVCTGSAPVPED
Trigger: ATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCTCGGTGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 90 bp GGCTCTCCCCGCCGGGGCCGCATGACGTCGGTGGCCAGTGTGCGGTaGGTAAACTCGTCCTTCACGTCAAGGAAAGGGTACCCATTTAAG +
Preference number: 1 (lower is better)
Translates to: GSPRRGRMTSVASVR*VNSSFTSRKGYPFK
Trigger: CTTAAATGGGTACCCTTTCCTTGACGTGAAGGACGAGTTTACTCACCGCACACTGGCCACCGACGTCATGCGGCCCCGGCGGGGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 90 bp GGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTaGACCGGGTCTGCACCAGTTCCTGAAGATGATCCAGTCATGGTG +
Preference number: 1 (lower is better)
Translates to: GRSSHHCVQPWRDTV*TGSAPVPEDDPVMV
Trigger: CACCATGACTGGATCATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 90 bp ACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTGTACGGAGGGGATTaGTGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAA +
Preference number: 1 (lower is better)
Translates to: TPHCRWSQRVLYGGD*CPQGSGSAGRVLHQ
Trigger: TTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAGTGGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR TCA 90 bp CGTTCTTTATTGCGAGAATCAGTTCCCTCCTCTGGGCAAATCCAATaGGGCGCTCGGAGTCTCTGGAGACCACCACGGGGAAGCCGTTGT +
Preference number: 1 (lower is better)
Translates to: RSLLRESVPSSGQIQ*GARSLWRPPRGSRC
Trigger: ACAACGGCTTCCCCGTGGTGGTCTCCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGATTCTCGCAATAAAGAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CCA 90 bp TGCCTCTGTCTGGCGTTCTTTATTGCGAGAATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGCTCGGAGTCTCTGGAGACCACCACG +
Preference number: 1 (lower is better)
Translates to: CLCLAFFIARISSLL*ANPMRRSESLETTT
Trigger: CGTGGTGGTCTCCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGATTCTCGCAATAAAGAACGCCAGACAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 90 bp GCCGGTCTGGAATGTCATCCACAGGCCGAGTCATGTTGGGGTCATTaGTGTAGTCACAGAGCTGGGAAGACTCAAGGGCTCCACAGTCAT +
Preference number: 1 (lower is better)
Translates to: AGLECHPQAESCWGH*CSHRAGKTQGLHSH
Trigger: ATGACTGTGGAGCCCTTGAGTCTTCCCAGCTCTGTGACTACATCAATGACCCCAACATGACTCGGCCTGTGGATGACATTCCAGACCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 90 bp TTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACTaGAGACTCCTCATCCTTGACCTTAGTCCACCTGTCCAACTCTGG +
Preference number: 1 (lower is better)
Translates to: LGLHGRKAVCCGSPH*RLLILDLSPPVQLW
Trigger: CCAGAGTTGGACAGGTGGACTAAGGTCAAGGATGAGGAGTCTGCAGTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTaGTGTGGTAGTCCCCACTGCAGACTCCTCATCCTTGACCTTAGT +
Preference number: 1 (lower is better)
Translates to: VDHMAELGLHGRKAV*CGSPHCRLLILDLS
Trigger: ACTAAGGTCAAGGATGAGGAGTCTGCAGTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CCA 90 bp CTGTCCTCAAAAGTGGTCTCGTTAGAAGTCCAGCAACACTGCTCATaGCTATACCAGAAGGCAGACAGGCAGACCCCCTCCTTCAGGTCC +
Preference number: 1 (lower is better)
Translates to: LSSKVVSLEVQQHCS*LYQKADRQTPSFRS
Trigger: GGACCTGAAGGAGGGGGTCTGCCTGTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTCTAACGAGACCACTTTTGAGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 90 bp GCTAGGGGGAGCCACGTGACAGACTTCCAGTCAATGGATACAAGCTaGGCGTCTCTGGGGAAGCTTTGCTTTCCTGATAGACATTGTACC +
Preference number: 1 (lower is better)
Translates to: ARGSHVTDFQSMDTS*ASLGKLCFPDRHCT
Trigger: GGTACAATGTCTATCAGGAAAGCAAAGCTTCCCCAGAGACGCTCAGCTTGTATCCATTGACTGGAAGTCTGTCACGTGGCTCCCCCTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 90 bp TTGTCTCTGTCCTCAAAAGTGGTCTCGTTAGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAGGCAGACAGGCAGACCCCCTCCTTC +
Preference number: 1 (lower is better)
Translates to: LSLSSKVVSLEVQQH*SWLYQKADRQTPSF
Trigger: GAAGGAGGGGGTCTGCCTGTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTCTAACGAGACCACTTTTGAGGACAGAGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 90 bp ATTGATGGATCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATaGCCTCCACAAGGTCTTCAGGGGAAAGTAGTAACTGACCTCTTC +
Preference number: 1 (lower is better)
Translates to: IDGSQRKGRHQGCEK*PPQGLQGKVVTDLF
Trigger: GAAGAGGTCAGTTACTACTTTCCCCTGAAGACCTTGTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGATCCATCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CCA 90 bp TGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATaGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAG +
Preference number: 1 (lower is better)
Translates to: CLDSCICYLKMKARL*QAGGIPAMAHGSAE
Trigger: CTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CCA 90 bp AATAGCAACGGGATGGGGATCCCAATGATGTTATGGAGACAGTCCTaGAGTACCCCCTCTCAGGGTTCTTATCCAGCCCTTCAGTGTTTG +
Preference number: 1 (lower is better)
Translates to: NSNGMGIPMMLWRQS*STPSQGSYPALQCL
Trigger: CAAACACTGAAGGGCTGGATAAGAACCCTGAGAGGGGGTACTCCAGGACTGTCTCCATAACATCATTGGGATCCCCATCCCGTTGCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 90 bp GGTTTAGCAAGAATGAAAACCGGAAGGGCAATGACAAGGACACGATaGTGGCATCCAATACAGCAAACTTCCCCTCCTGAAGACCAACAC +
Preference number: 1 (lower is better)
Translates to: GLARMKTGRAMTRTR*WHPIQQTSPPEDQH
Trigger: GTGTTGGTCTTCAGGAGGGGAAGTTTGCTGTATTGGATGCCATCATCGTGTCCTTGTCATTGCCCTTCCGGTTTTCATTCTTGCTAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 90 bp TGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTCTTGCATAGAGAAATGATTTCTTCA +
Preference number: 1 (lower is better)
Translates to: WEETHRSTVCSNSSS*SPRMPVLHREMISS
Trigger: TGAAGAAATCATTTCTCTATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CCA 90 bp TTCACCTCCACGTCCCCATGCTGTTCATCAGATCACCAGATAAAGTaGATGGAAGTTCTGCATTTGGAGAGAGCAAATACCCTTGGGATC +
Preference number: 1 (lower is better)
Translates to: FTSTSPCCSSDHQIK*MEVLHLERANTLGI
Trigger: GATCCCAAGGGTATTTGCTCTCTCCAAATGCAGAACTTCCATCCACTTTATCTGGTGATCTGATGAACAGCATGGGGACGTGGAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CCA 90 bp AGGATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATaGCAGGTGCCCCTGATGTTGGTTCAGAAACTGATGGATAAGCCA +
Preference number: 1 (lower is better)
Translates to: RMPVLHREMISSHSS*QVPLMLVQKLMDKP
Trigger: TGGCTTATCCATCAGTTTCTGAACCAACATCAGGGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CCA 90 bp GATAAAGTGGATGGAAGTTCTGCATTTGGAGAGAGCAAATACCCTTaGGATCCCTACCCAACTACGTTTACAAGAAAGACAGAGCATGGC +
Preference number: 1 (lower is better)
Translates to: DKVDGSSAFGESKYP*DPYPTTFTRKTEHG
Trigger: GCCATGCTCTGTCTTTCTTGTAAACGTAGTTGGGTAGGGATCCCAAGGGTATTTGCTCTCTCCAAATGCAGAACTTCCATCCACTTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CCA 90 bp TATTTTACTGAACAGGTATCCCAAAATGCAGCCATTCCAGGAATCTaGATACTTAAGGATGCTGCCACATATCTTCCCATCACGCCCAGG +
Preference number: 1 (lower is better)
Translates to: YFTEQVSQNAAIPGI*ILKDAATYLPITPR
Trigger: CCTGGGCGTGATGGGAAGATATGTGGCAGCATCCTTAAGTATCCAGATTCCTGGAATGGCTGCATTTTGGGATACCTGTTCAGTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR CCA 90 bp GGCCTCAGCCAGATTAGAAAGAAATGCTGTGGTTTCACTGACCTTTaGCTATCTTTTCACTGTTTCATGTTCCCTTTTGAAGCCACTTGT +
Preference number: 1 (lower is better)
Translates to: GLSQIRKKCCGFTDL*LSFHCFMFPFEATC
Trigger: ACAAGTGGCTTCAAAAGGGAACATGAAACAGTGAAAAGATAGCCAAAGGTCAGTGAAACCACAGCATTTCTTTCTAATCTGGCTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 90 bp ATCAATTTAGTATTTCTCTTGCAATCCATTTGGAGGGATTCCAACTaGCAACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAG +
Preference number: 1 (lower is better)
Translates to: INLVFLLQSIWRDSN*QRICLILSTAVSDK
Trigger: CTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCAAATGGATTGCAAGAGAAATACTAAATTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
3UTR TCA 90 bp AAGATTGGGTTGTTTCAGTCAAGTAACTCTTCCAACTGTTTGCCATaGATTTGCAGGTATCTCTACTCTAAGCACTGGGGAGGACACAAA +
Preference number: 1 (lower is better)
Translates to: KIGLFQSSNSSNCLP*ICRYLYSKHWGGHK
Trigger: TTTGTGTCCTCCCCAGTGCTTAGAGTAGAGATACCTGCAAATTCATGGCAAACAGTTGGAAGAGTTACTTGACTGAAACAACCCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 90 bp AAAGTAAGATTGGGTTGTTTCAGTCAAGTAACTCTTCCAACTGTTTaGCATGAATTTGCAGGTATCTCTACTCTAAGCACTGGGGAGGAC +
Preference number: 1 (lower is better)
Translates to: KVRLGCFSQVTLPTV*HEFAGISTLSTGED
Trigger: GTCCTCCCCAGTGCTTAGAGTAGAGATACCTGCAAATTCATGGCAAACAGTTGGAAGAGTTACTTGACTGAAACAACCCAATCTTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 90 bp AAAAACCTTATTCTGAAAGATGCTTATTTCACCTCCACGTCCCCATaGTGTTCATCAGATCACCAGATAAAGTGGATGGAAGTTCTGCAT +
Preference number: 1 (lower is better)
Translates to: KNLILKDAYFTSTSP*CSSDHQIKWMEVLH
Trigger: ATGCAGAACTTCCATCCACTTTATCTGGTGATCTGATGAACAGCATGGGGACGTGGAGGTGAAATAAGCATCTTTCAGAATAAGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 90 bp AGAACTGAGATTACCTGGTTCAAAGTAACAGTAAGCACTGAATATTaGATGACTTCGACTTCTAGCACATTCTGCCTTTCCCTAAAAGCC +
Preference number: 1 (lower is better)
Translates to: RTEITWFKVTVSTEY*MTSTSSTFCLSLKA
Trigger: GGCTTTTAGGGAAAGGCAGAATGTGCTAGAAGTCGAAGTCATTCAATATTCAGTGCTTACTGTTACTTTGAACCAGGTAATCTCAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 90 bp GGACCAAGGATTAAATTCTCTACTATTGACTGGATATTGTCACACTaGGGTGGCTACTTGATGTTATTTTGGAAGGAAGAGGTCAATGAA +
Preference number: 1 (lower is better)
Translates to: GPRIKFSTIDWILSH*GGYLMLFWKEEVNE
Trigger: TTCATTGACCTCTTCCTTCCAAAATAACATCAAGTAGCCACCTCAGTGTGACAATATCCAGTCAATAGTAGAGAATTTAATCCTTGGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 90 bp AATTCTCTACTATTGACTGGATATTGTCACACTGAGGTGGCTACTTaGTGTTATTTTGGAAGGAAGAGGTCAATGAATTACACAAACAAA +
Preference number: 1 (lower is better)
Translates to: NSLLLTGYCHTEVAT*CYFGRKRSMNYTNK
Trigger: TTTGTTTGTGTAATTCATTGACCTCTTCCTTCCAAAATAACATCAAGTAGCCACCTCAGTGTGACAATATCCAGTCAATAGTAGAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 90 bp CACAACACCAACACTAACATTAAGACCTGTTACTCAAGGCTTACGTaGTATAAATACGACAATGAATTTTATTCTTTTATAGGACCAAGG +
Preference number: 1 (lower is better)
Translates to: HNTNTNIKTCYSRLT*YKYDNEFYSFIGPR
Trigger: CCTTGGTCCTATAAAAGAATAAAATTCATTGTCGTATTTATAGCACGTAAGCCTTGAGTAACAGGTCTTAATGTTAGTGTTGGTGTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CAA 90 bp ACCACAATGACCTCCAGCACCGGGTACTTCCCCAGCCTGGTGGTCTaGCGCCTCCTGCACCAGGCGATGTTGCAGCGGATGAAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: TTMTSSTGYFPSLVV*RLLHQAMLQRMKRV
Trigger: AACCCTCTTCATCCGCTGCAACATCGCCTGGTGCAGGAGGCGCAAGACCACCAGGCTGGGGAAGTACCCGGTGCTGGAGGTCATTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCTGGCACCCTCTGACTaGTTCACCAGCAGCTCCGAC +
Preference number: 2 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCLAPSD*FTSSSD
Trigger: GTCGGAGCTGCTGGTGAATCAGTCAGAGGGTGCCAG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CAA 90 bp TACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTGTACGGAGGGGATaGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCA +
Preference number: 2 (lower is better)
Translates to: YSPLSLVPEGAVRRG*MSSRVRVGWQGSPS
Trigger: TGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGGCGTGACACAGTCTaGACCGGGTCTGCACCAGTT +
Preference number: 2 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCWRDTV*TGSAPV
Trigger: AACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCA...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp TACAGCCCTGGCGTGACACAGTCTGCACCGGGTCTGCACCAGTTCCTGAAGATGCGATGTTGCAGCGGATaGAGAGGGTTCCCCACAAGC +
Preference number: 2 (lower is better)
Translates to: YSPGVTQSAPGLHQFLKMRCCSG*RGFPTS
Trigger: GCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCG...CATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp AGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTGCAAAGCACGCCTCCAATTaGTGCACCAAAGGCAACAGA +
Preference number: 2 (lower is better)
Translates to: RQAAAPTIAYSPGVTQSAKHASN*CTKGNR
Trigger: TCTGTTGCCTTTGGTGCACCAATTGGAGGCGTGCTT...TGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CAA 90 bp TGCCACATATCTTCCCATCACGCCCAGGTCTACTCCCCACTGTCGTaGGTCCCAGAGGGTGCTGTACGGAGGGGATTGATGTCCTCAAGG +
Preference number: 2 (lower is better)
Translates to: CHISSHHAQVYSPLS*VPEGAVRRGLMSSR
Trigger: CCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGGAAGATATGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR TCA 90 bp CCGGTCTGGAATGTCATCCACAGGCCGAGTCATGTTGGGGTCATTGATGTAGTCAGCAGCCGCTGCAGCTaGAAGCACCTCCCGCCTCTT +
Preference number: 2 (lower is better)
Translates to: PVWNVIHRPSHVGVIDVVSSRCS*KHLPPL
Trigger: AAGAGGCGGGAGGTGCTTTCAGCTGCAGCGGCTGCT...GACTACATCAATGACCCCAACATGACTCGGCCTGTGGATGACATTCCAGACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp AGTGATGGCAGTCACCACAATGACCTCCAGCACCGGGTACTTCCCCAGCCTGGTAGACCCCAAGCAGGATaGAGGGGAAGAGTTCAGCCA +
Preference number: 2 (lower is better)
Translates to: SDGSHHNDLQHRVLPQPGRPQAG*RGRVQP
Trigger: TGGCTGAACTCTTCCCCTTCATCCTGCTTGGGGTCT...ACCAGGCTGGGGAAGTACCCGGTGCTGGAGGTCATTGTGGTGACTGCCATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR GCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGCGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCATAAGGACGCTGACATaGCGATGCCCCTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCIRTLT*RCPFVF
Trigger: AAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGCAGCAACAAGCCACGTaGACTAGCGGCCCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRQQQAT*TSGPSF
Trigger: GAAGGAAGGGCCGCTAGTGCACGTGGCTTGTTGCTG...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp TACTCCAGACCCCCGGTTAATTCAAACATGATGACCACCAATGACACCGTCATCCCACGGCGAGATCGATaGCCCCAGCCAAGGTGCCTA +
Preference number: 2 (lower is better)
Translates to: YSRPPVNSNMMTTNDTVIPRRDR*PQPRCL
Trigger: TAGGCACCTTGGCTGGGGTCATCGATCTCGCCGTGG...GATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCCGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTC +
Preference number: 2 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSSNSSS*SPRMPV
Trigger: GACTGGCATCCTGGGACTGCACGATGAACTATTGGA...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCCGTGAGCGGACCCACTaGCATACTTGCAGCTTTCAC +
Preference number: 2 (lower is better)
Translates to: GGIPAMAHGSAELINIECRERTH*HTCSFH
Trigger: GTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACG...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GGGTCTGCACCAGTTCCTGAAGATGATCCAGTCATGGTGATGGTAGGCCAGCTGTGGAGGGATTCCAACTaGCAACGCATATGCCTCATC +
Preference number: 2 (lower is better)
Translates to: GSAPVPEDDPVMVMVGQLWRDSN*QRICLI
Trigger: GATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCA...CAGCTGGCCTACCATCACCATGACTGGATCATCTTCAGGAACTGGTGCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTCCAACTGTTTGCCATaGATTTGCAGGTATCTCTAC +
Preference number: 2 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCSNCLP*ICRYLY
Trigger: GTAGAGATACCTGCAAATTCATGGCAAACAGTTGGA...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCGCCACAGGCATATGGTaGAAATACACGCACCAGGGA +
Preference number: 2 (lower is better)
Translates to: GGIPAMAHGSAELINIECATGIW*KYTHQG
Trigger: TCCCTGGTGCGTGTATTTGCACCATATGCCTGTGGC...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR GCA 90 bp CCTTCACGTCAAGGAAAGGGTACCCATTTAAGTGGATGTGGGCCTCGTAGATGCGCACCTCCCGCCTCTTaGCCTCATTCTTGCTGTACT +
Preference number: 2 (lower is better)
Translates to: PSRQGKGTHLSGCGPRRCAPPAS*PHSCCT
Trigger: AGTACAGCAAGAATGAGGGCAAGAGGCGGGAGGTGC...GCATCTACGAGGCCCACATCCACTTAAATGGGTACCCTTTCCTTGACGTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATACGCTTATGGCAGGCTaGGGGCATACCGGCTATGGC +
Preference number: 2 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHTLMAG*GHTGYG
Trigger: GCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGT...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp TACTCCAGACCCCCGGTTAATTCAAACATGATGACCACCAATGACACCGTCATCACGCTTATGGCAGGCTaGGGGCATACCGGCTATGGC +
Preference number: 2 (lower is better)
Translates to: YSRPPVNSNMMTTNDTVITLMAG*GHTGYG
Trigger: GCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGT...GATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTGGAGGGATTCCAACTaGCAACGCATATGCCTCATC +
Preference number: 2 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVWRDSN*QRICLI
Trigger: GATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCCGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTCGCAGCTCCCACCATTaGGTACAGCCCTGGCGTGAC +
Preference number: 2 (lower is better)
Translates to: INKDADMPMPLCLLDSTLRSSHH*VQPWRD
Trigger: GTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCG...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGT +
Preference number: 2 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKMCPFV*EETHRS
Trigger: ACTGCGGTGTGTCTCCTCCCATACAAAGGGACACAT...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATACGCTTATGGCAGGCTaGGGGCATACCGGCTATGGC +
Preference number: 2 (lower is better)
Translates to: AYASSSPQPYLIRPERKNTLMAG*GHTGYG
Trigger: GCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp GACGATTTTGAAGATCAGTGCCAGGGCCAGCTGCCACATGGCCGTGTAAACACCAATGGTCTTTATCTCTaGTATGCCAGAGCCACAGGC +
Preference number: 2 (lower is better)
Translates to: DDFEDQCQGQLPHGRVNTNGLYL*YARATG
Trigger: GCCTGTGGCTCTGGCATACCAGAGATAAAGACCATT...GGTGTTTACACGGCCATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 2 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTGAAACAGGACGGTCGTaGGCGGACCCACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: AKLQEPINKDADMPMPLCETGRS*ADPLAY
Trigger: GTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTC...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGAAACAGGACGGTCGTaGGCGGACCCACTGGCATAC +
Preference number: 2 (lower is better)
Translates to: ACLDSCICYLKMKARLWQETGRS*ADPLAY
Trigger: GTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTC...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 2 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GACGATTTTGAAGATCAGTGCCAGGGCCAGCTGCCACATGGCCGTGTAAACACCACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: DDFEDQCQGQLPHGRVNTTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...GGTGTTTACACGGCCATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTTGGTCTTGCGCCTCCTaGACCAGGCGATGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: INKDADMPMPLCLLDSTLWSCAS*TRRCCS
Trigger: GCTGCAACATCGCCTGGTGCAGGAGGCGCAAGACCA...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGCCTTCTTTCCCAAATaGATCAGCTACCCACTTGCT +
Preference number: 2 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVAFFPK*ISYPLA
Trigger: AGCAAGTGGGTAGCTGATGCATTTGGGAAAGAAGGC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGC +
Preference number: 2 (lower is better)
Translates to: DSCICYLKMKARLWQAGGISSLL*ANPMRR
Trigger: GCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGAT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTCCTGGTTTGCCATCTaGGCCATATGTCTCAGAACA +
Preference number: 2 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVSWFAI*AICLRT
Trigger: TGTTCTGAGACATATGGCCCAGATGGCAAACCAGGA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 2 (lower is better)
Translates to: LENESTLMAGWGHTGYGPAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp TTGATGGATCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATGACCTCCACGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 2 (lower is better)
Translates to: LMDLSVKAATRAAKNDLHGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...GTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGATCCATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTATGGAAGTGCTGAGCTaGTCAATATTGAATGCATGG +
Preference number: 2 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGMEVLS*SILNAW
Trigger: CCATGCATTCAATATTGATCAGCTCAGCACTTCCAT...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR TCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTAGCACTGGCACCCTCTaGCTGATTCACCAGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AKLQEPINKDADMPMPLCSTGTL*LIHQQL
Trigger: GAGCTGCTGGTGAATCAGTCAGAGGGTGCCAGTGCT...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCACGCTGACATGCCGATaGCCCTTTGTCTTTTGGACT +
Preference number: 2 (lower is better)
Translates to: DSCICYLKMKARLWQAGGTLTCR*PFVFWT
Trigger: AGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACGTTGGTCCCAGAGGGTaGTGTACGGAGGGGATTGAT +
Preference number: 2 (lower is better)
Translates to: QEPINKDADMPMPLCLLDVGPRG*CTEGID
Trigger: ATCAATCCCCTCCGTACAGCACCCTCTGGGACCAAC...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR CCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 2 (lower is better)
Translates to: GGIPAMAHGSAELINIECCPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTTTAGGAAACACAGCTTaGAACTCATACGGGGTTAAA +
Preference number: 2 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGLGNTA*NSYGVK
Trigger: TTTAACCCCGTATGAGTTTCAAGCTGTGTTTCCTAA...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGTTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 2 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 2 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATACGCTGACATGCCGATaGCCCTTTGTCTTTTGGACT +
Preference number: 2 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHTLTCR*PFVFWT
Trigger: AGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGT...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATAAGGACGCTGACATaGCGATGCCCCTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: DSCICYLKMKARLWQAGGIRTLT*RCPFVF
Trigger: AAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCAGGAAGGAAGGCAGTTTaGTGTGGTAGTCCCCACTGC +
Preference number: 2 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSGRKAV*CGSPHC
Trigger: GCAGTGGGGACTACCACAGCAAACTGCCTTCCTTCC...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACAGCTCCGACCATTTCTaGCACAGGGGACACTTGTCT +
Preference number: 2 (lower is better)
Translates to: QEPINKDADMPMPLCLLDSSDHF*HRGHLS
Trigger: AGACAAGTGTCCCCTGTGGCAGAAATGGTCGGAGCT...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAATGAAGCAAATGCCATaGGGATGCAAATCAATGATC +
Preference number: 2 (lower is better)
Translates to: LENESTLMAGWGHTGYGPMKQMP*GCKSMI
Trigger: GATCATTGATTTGCATCCCCATGGCATTTGCTTCAT...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CAA 90 bp CTCTGGGGAAGCTTTGCTTTCCTGATAGACATTGTACCTAGTTGCTaGCCTCTCCCTTCCTCTTCCCACTTAGAAAGCAGACATGATACC +
Preference number: 2 (lower is better)
Translates to: LWGSFAFLIDIVPSC*PLPSSSHLESRHDT
Trigger: GGTATCATGTCTGCTTTCTAAGTGGGAAGAGGAAGGGAGAGGCAAGCAACTAGGTACAATGTCTATCAGGAAAGCAAAGCTTCCCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTGTTGGTTCAGAAACTaGTGGATAAGCCAGATAACA +
Preference number: 2 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVCWFRN*WISQIT
Trigger: TGTTATCTGGCTTATCCATCAGTTTCTGAACCAACA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 2 (lower is better)
Translates to: LENESTLMAGWGHTGYGPKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGTTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 2 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRLSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAATGAAGCAAATGCCATaGGGATGCAAATCAATGATC +
Preference number: 2 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKMKQMP*GCKSMI
Trigger: GATCATTGATTTGCATCCCCATGGCATTTGCTTCAT...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGATTTACCCACCCACATaGCCCCACAGCAGTAGCAAA +
Preference number: 2 (lower is better)
Translates to: ACLDSCICYLKMKARLWQIYPPT*PHSSSK
Trigger: TTTGCTACTGCTGTGGGGGCATGTGGGTGGGTAAAT...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCITHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCACGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 2 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCACCGCAGTACTGTATaGTCCAATAGTTCATCGTGC +
Preference number: 2 (lower is better)
Translates to: MPVLHREMISSHSSWQVPHRSTV*SNSSSC
Trigger: GCACGATGAACTATTGGAGCATACAGTACTGCGGTG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAACAGGTATCCCAAAATaGAGCCATTCCAGGAATCTG +
Preference number: 2 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCITGIPK*SHSRNL
Trigger: CAGATTCCTGGAATGGCTGCATTTTGGGATACCTGT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATATGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 2 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCICPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp TACTCCAGACCCCCGGTTAATTCAAACATGATGACCACCAATGACACCGTCATCTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 2 (lower is better)
Translates to: YSRPPVNSNMMTTNDTVICPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...GATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGT +
Preference number: 2 (lower is better)
Translates to: ACLDSCICYLKMKARLWQMCPFV*EETHRS
Trigger: ACTGCGGTGTGTCTCCTCCCATACAAAGGGACACAT...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 2 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATTTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 2 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCTCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTC +
Preference number: 2 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFSNSSS*SPRMPV
Trigger: GACTGGCATCCTGGGACTGCACGATGAACTATTGGA...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACACCGCAGTACTGTATaGTCCAATAGTTCATCGTGC +
Preference number: 2 (lower is better)
Translates to: EANAMGMQINDRVSIPSKHRSTV*SNSSSC
Trigger: GCACGATGAACTATTGGAGCATACAGTACTGCGGTG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCGCCTGTTTGGACTCTTaGATATGCTACTTGAAAATG +
Preference number: 2 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVACLDS*ICYLKM
Trigger: CATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTCAGCAACACTGCTCATaGCTATACCAGAAGGCAGAC +
Preference number: 2 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSQQHCS*LYQKAD
Trigger: GTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTG...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 2 (lower is better)
Translates to: DSCICYLKMKARLWQAGGKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCAAGCAGACATGATACCTaGCAGTTCAGGAACCATCTT +
Preference number: 2 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSSRHDT*QFRNHL
Trigger: AAGATGGTTCCTGAACTGTCAGGTATCATGTCTGCT...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 2 (lower is better)
Translates to: NAYASSSPQPYLIRPERKLSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCATAAGGACGCTGACATaGCGATGCCCCTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: INEANAMGMQINDRVSIPIRTLT*RCPFVF
Trigger: AAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 2 (lower is better)
Translates to: EANAMGMQINDRVSIPSKAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 2 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFCPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGTGCCAAGAAGTCTCCTaGCCCCATATCCTCTGTATT +
Preference number: 2 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLCQEVS*PHILCI
Trigger: AATACAGAGGATATGGGGCCAGGAGACTTCTTGGCA...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR TCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGATACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 2 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGATTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 2 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARLSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTGCCTGTTTGGACTCTTaGATATGCTACTTGAAAATG +
Preference number: 2 (lower is better)
Translates to: INKDADMPMPLCLLDSTLACLDS*ICYLKM
Trigger: CATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGTCAGAATGTAAGCACTaGCACCCTCTGACTGATTCA +
Preference number: 2 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLSECKH*HPLTDS
Trigger: TGAATCAGTCAGAGGGTGCCAGTGCTTACATTCTGA...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 2 (lower is better)
Translates to: KLQEPINKDADMPMPLCLYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 2 (lower is better)
Translates to: INEANAMGMQINDRVSIPYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATACAAAGATGCCCAGTaGCCAAATTGGCTATATAAA +
Preference number: 2 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSYKDAQ*PNWLYK
Trigger: TTTATATAGCCAATTTGGGCACTGGGCATCTTTGTA...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAG +
Preference number: 2 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSEVQQH*SWLYQK
Trigger: CTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTC...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR TCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 2 (lower is better)
Translates to: VVTLGSLFGLLHMLLENEAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR TCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 2 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 2 (lower is better)
Translates to: VVTLGSLFGLLHMLLENEFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 2 (lower is better)
Translates to: VVTLGSLFGLLHMLLENELSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CAA 90 bp AACCCCACAATAAATCAGAGGTTCAACTTACGAAAGAAAGTAAGATaGGGTTGTTTCAGTCAAGTAACTCTTCCAACTGTTTGCCATGAA +
Preference number: 2 (lower is better)
Translates to: NPTINQRFNLRKKVR*GCFSQVTLPTVCHE
Trigger: TTCATGGCAAACAGTTGGAAGAGTTACTTGACTGAAACAACCCAATCTTACTTTCTTTCGTAAGTTGAACCTCTGATTTATTGTGGGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAACTTATACATTACAACTaGATGTTTTGCATCCTACAG +
Preference number: 2 (lower is better)
Translates to: VVTLGSLFGLLHMLLENELIHYN*MFCILQ
Trigger: CTGTAGGATGCAAAACATCCAGTTGTAATGTATAAG...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
3UTR TCA 72 bp GCGTCTCCACGTCCTCGACAGTCATGCTGTCCTGGGTaGGCACCGACAGTGGCGGCTCTCCCCGCCGGGGCC +
Preference number: 3 (lower is better)
Translates to: ASPRPRQSCCPG*APTVAALPAGA
Trigger: GGCCCCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACCCAGGACAGCATGACTGTCGAGGACGTGGAGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CCA 72 bp ATGAGCGTCTCCACGTCCTCGACAGTCATGCTGTCCTaGGTGAGCACCGACAGTGGCGGCTCTCCCCGCCGG +
Preference number: 3 (lower is better)
Translates to: MSVSTSSTVMLS*VSTDSGGSPRR
Trigger: CCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACCCAGGACAGCATGACTGTCGAGGACGTGGAGACGCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CCA 72 bp GAGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTaGCGTGACACAGTCTGCACCGGGTCTGCACCAGTT +
Preference number: 3 (lower is better)
Translates to: EAGRSSHHCVQP*RDTVCTGSAPV
Trigger: AACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 72 bp GAGCCCCCGGGCCCCTGGGTGAGTGGACCACATGGCTaGGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: EPPGPWVSGPHG*VRTPRKEGSLL
Trigger: CAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCACTCACCCAGGGGCCCGGGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 72 bp CGCCGGGGCCGCATGACGTCGGTGGCCAGTGTGCGGTaGGTAAACTCGTCCTTCACGTCAAGGAAAGGGTAC +
Preference number: 3 (lower is better)
Translates to: RRGRMTSVASVR*VNSSFTSRKGY
Trigger: GTACCCTTTCCTTGACGTGAAGGACGAGTTTACTCACCGCACACTGGCCACCGACGTCATGCGGCCCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 72 bp TGTCGTTGGTCCCAGAGGGTGCTGTACGGAGGGGATTaGTGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTT +
Preference number: 3 (lower is better)
Translates to: CRWSQRVLYGGD*CPQGSGSAGRV
Trigger: AACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR CCA 72 bp CATGGCCGTGTAAACACCGACACCAGCCGGCCGGTCTaGAATGTCATCCACAGGCCGAGTCATGTTGGGGTC +
Preference number: 3 (lower is better)
Translates to: HGRVNTDTSRPV*NVIHRPSHVGV
Trigger: GACCCCAACATGACTCGGCCTGTGGATGACATTCCAGACCGGCCGGCTGGTGTCGGTGTTTACACGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CCA 72 bp CGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTaGCAGGGTTCTCCATCAAAGGTCCTCCCGGTACCT +
Preference number: 3 (lower is better)
Translates to: RRGLMSSRVRVG*QGSPSKVLPVP
Trigger: AGGTACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR CAA 90 bp AGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTGCAACCAGCGTGACTGTCTaGATTAGCAGGGTCCACTTC +
Preference number: 3 (lower is better)
Translates to: RQAAAPTIAYSPGVTQSATSVTV*ISRVHF
Trigger: GAAGTGGACCCTGCTAATCAAGACAGTCACGCTGGT...TGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 72 bp CCTTCAGGTCCGTCATCCAGTCCACGGCGAGATCGATaGCCCCAGCCAAGGTGCCTACTACACGGCAGTTAC +
Preference number: 3 (lower is better)
Translates to: PSGPSSSPRRDR*PQPRCLLHGSY
Trigger: GTAACTGCCGTGTAGTAGGCACCTTGGCTGGGGTCATCGATCTCGCCGTGGACTGGATGACGGACCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 72 bp CCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTaGTGTACGGAGGGGATTGATGTCCTCAAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: PGLLPTVVGPRG*CTEGIDVLKGQ
Trigger: CTGACCCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACCCAGCCTGGTGGTCTaGCGCCTCCTGCACCAGGCG +
Preference number: 3 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIPSLVV*RLLHQA
Trigger: CGCCTGGTGCAGGAGGCGCAAGACCACCAGGCTGGG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 72 bp TTGCGAGAATCAGTTCCCTCCTCTGGGCAAATCCAATaGGGCGCTCGGAGTCTCTGGAGACCACCACGGGGA +
Preference number: 3 (lower is better)
Translates to: LRESVPSSGQIQ*GARSLWRPPRG
Trigger: TCCCCGTGGTGGTCTCCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGATTCTCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 72 bp TCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTaGACCGGGTCTGCACCAGTTCCTGAAGATGATCCA +
Preference number: 3 (lower is better)
Translates to: SHHCVQPWRDTV*TGSAPVPEDDP
Trigger: TGGATCATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CAA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR GCA 72 bp CACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACTaGAGACTCCTCATCCTTGACCTTAGTCCACCTGTC +
Preference number: 3 (lower is better)
Translates to: HGRKAVCCGSPH*RLLILDLSPPV
Trigger: GACAGGTGGACTAAGGTCAAGGATGAGGAGTCTGCAGTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CCA 72 bp GGGATGGGGATCCCAATGATGTTATGGAGACAGTCCTaGAGTACCCCCTCTCAGGGTTCTTATCCAGCCCTT +
Preference number: 3 (lower is better)
Translates to: GMGIPMMLWRQS*STPSQGSYPAL
Trigger: AAGGGCTGGATAAGAACCCTGAGAGGGGGTACTCCAGGACTGTCTCCATAACATCATTGGGATCCCCATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CCA 72 bp AAAGTGGTCTCGTTAGAAGTCCAGCAACACTGCTCATaGCTATACCAGAAGGCAGACAGGCAGACCCCCTCC +
Preference number: 3 (lower is better)
Translates to: KVVSLEVQQHCS*LYQKADRQTPS
Trigger: GGAGGGGGTCTGCCTGTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTCTAACGAGACCACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR CCA 72 bp CTGGCGTTCTTTATTGCGAGAATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGCTCGGAGTCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: LAFFIARISSLL*ANPMRRSESLE
Trigger: CTCCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGATTCTCGCAATAAAGAACGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CAA 90 bp ATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: MAELGLHGRKAVCCGSPHDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...GTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 72 bp TCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATaGCCTCCACAAGGTCTTCAGGGGAAAGTAGTAACT +
Preference number: 3 (lower is better)
Translates to: SQRKGRHQGCEK*PPQGLQGKVVT
Trigger: AGTTACTACTTTCCCCTGAAGACCTTGTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR TCA 72 bp GAATGTCATCCACAGGCCGAGTCATGTTGGGGTCATTaGTGTAGTCACAGAGCTGGGAAGACTCAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: ECHPQAESCWGH*CSHRAGKTQGL
Trigger: GAGCCCTTGAGTCTTCCCAGCTCTGTGACTACATCAATGACCCCAACATGACTCGGCCTGTGGATGACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR GCA 72 bp CCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATaGTCCAATAGTTCATCGTGCAGTCCCAGGATGCCA +
Preference number: 3 (lower is better)
Translates to: PFVWEETHRSTV*SNSSSCSPRMP
Trigger: TGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CCA 72 bp TCCCTACCCAACTACGTTTACAAGAAAGACAGAGCATaGCAGCATGTTCCCCATGGGGTTTGTCTGAGCCCC +
Preference number: 3 (lower is better)
Translates to: SLPNYVYKKDRA*QHVPHGVCLSP
Trigger: GGGGCTCAGACAAACCCCATGGGGAACATGCTGCCATGCTCTGTCTTTCTTGTAAACGTAGTTGGGTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTTACAAACATCAGCCTaGAGCAGAAGGAGTAAAAGT +
Preference number: 3 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCLQTSA*SRRSKS
Trigger: ACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAA...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 3 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 3 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCSCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACATACTCCCCACTGTCGTaGGTCCCAGAGGGTGCTGTA +
Preference number: 3 (lower is better)
Translates to: PINKDADMPMPLCLLDSTYSPLS*VPEGAV
Trigger: TACAGCACCCTCTGGGACCAACGACAGTGGGGAGTA...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR GCA 72 bp TCCTCAAAAGTGGTCTCGTTAGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAGGCAGACAGGCAGACC +
Preference number: 3 (lower is better)
Translates to: SSKVVSLEVQQH*SWLYQKADRQT
Trigger: GGTCTGCCTGTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTCTAACGAGACCACTTTTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CAA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 3 (lower is better)
Translates to: DSCICYLKMKARLWQAGGDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTGTTTCATGTTCCCTTTaGAAGCCACTTGTTTCAGCT +
Preference number: 3 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGVSCSL*KPLVSA
Trigger: AGCTGAAACAAGTGGCTTCAAAAGGGAACATGAAAC...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp CCTTCACGTCAAGGAAAGGGTACCCATTTAAGTGGATGTGGGCCTCGTAGATGCCTCTTGCCCTCATTCTaGCTGTACTTGGAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: PSRQGKGTHLSGCGPRRCLLPSF*LYLEKR
Trigger: CCTTTTCTCCAAGTACAGCAAGAATGAGGGCAAGAG...GCATCTACGAGGCCCACATCCACTTAAATGGGTACCCTTTCCTTGACGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CAA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCCTATTCCCAAAGGGATaGATGGATCTCAGCGTAAAG +
Preference number: 3 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVLFPKG*MDLSVK
Trigger: CTTTACGCTGAGATCCATCAATCCCTTTGGGAATAG...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CAA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACTGCACCAGGCGATGTaGCAGCGGATGAAGAGGGTT +
Preference number: 3 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARLHQAM*QRMKRV
Trigger: AACCCTCTTCATCCGCTGCAACATCGCCTGGTGCAG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
3UTR-3UTR CAA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAGCTGTACGGAGGGGATaGATGTCCTCAAGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: EANAMGMQINDRVSIPSKAVRRG*MSSRVR
Trigger: CCTGACCCTTGAGGACATCAATCCCCTCCGTACAGC...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR TCA 72 bp AGCCACGTGACAGACTTCCAGTCAATGGATACAAGCTaGGCGTCTCTGGGGAAGCTTTGCTTTCCTGATAGA +
Preference number: 3 (lower is better)
Translates to: SHVTDFQSMDTS*ASLGKLCFPDR
Trigger: TCTATCAGGAAAGCAAAGCTTCCCCAGAGACGCTCAGCTTGTATCCATTGACTGGAAGTCTGTCACGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 72 bp GCCTCTCCCTTCCTCTTCCCACTTAGAAAGCAGACATaGTACCTGACAGTTCAGGAACCATCTTGCAACTCT +
Preference number: 3 (lower is better)
Translates to: ASPFLFPLRKQT*YLTVQEPSCNS
Trigger: AGAGTTGCAAGATGGTTCCTGAACTGTCAGGTATCATGTCTGCTTTCTAAGTGGGAAGAGGAAGGGAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 3 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCAGCCTGTTTGGACTCTaGCATATGCTACTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVSLFGL*HMLLEN
Trigger: ATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCT...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACATTGGGTAGCCTGTTaGGACTCTTGCATATGCTAC +
Preference number: 3 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIHWVAC*DSCICY
Trigger: GTAGCATATGCAAGAGTCCAAACAGGCTACCCAATG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATCTCTTGCAATCCATTaGGAGGGATTCCAACTGACA +
Preference number: 3 (lower is better)
Translates to: NAYASSSPQPYLIRPERKSLAIH*EGFQLT
Trigger: TGTCAGTTGGAATCCCTCCAAATGGATTGCAAGAGA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
3UTR TCA 72 bp AGAATGAAAACCGGAAGGGCAATGACAAGGACACGATaGTGGCATCCAATACAGCAAACTTCCCCTCCTGAA +
Preference number: 3 (lower is better)
Translates to: RMKTGRAMTRTR*WHPIQQTSPPE
Trigger: TTCAGGAGGGGAAGTTTGCTGTATTGGATGCCATCATCGTGTCCTTGTCATTGCCCTTCCGGTTTTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 72 bp GGAAGCTTTGCTTTCCTGATAGACATTGTACCTAGTTaGTTGCCTCTCCCTTCCTCTTCCCACTTAGAAAGC +
Preference number: 3 (lower is better)
Translates to: GSFAFLIDIVPS*LPLPSSSHLES
Trigger: GCTTTCTAAGTGGGAAGAGGAAGGGAGAGGCAAGCAACTAGGTACAATGTCTATCAGGAAAGCAAAGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCTTACAAACATCAGCCTaGAGCAGAAGGAGTAAAAGT +
Preference number: 3 (lower is better)
Translates to: DSCICYLKMKARLWQAGGLQTSA*SRRSKS
Trigger: ACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAA...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CCA 72 bp GAGTATACCCTCAAAATAAGGATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGTACTGTATGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: EYTLKIRMCPFV*EETHRSTVCSN
Trigger: ATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGACACATCCTTATTTTGAGGGTATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CCA 72 bp ACGTCCCCATGCTGTTCATCAGATCACCAGATAAAGTaGATGGAAGTTCTGCATTTGGAGAGAGCAAATACC +
Preference number: 3 (lower is better)
Translates to: TSPCCSSDHQIK*MEVLHLERANT
Trigger: GGTATTTGCTCTCTCCAAATGCAGAACTTCCATCCACTTTATCTGGTGATCTGATGAACAGCATGGGGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 3 (lower is better)
Translates to: INEANAMGMQINDRVSIPMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR GCA 72 bp AAACACACATGTCACTTCCAGGGTGCCCTTATTTGGTaGTTTTGTACAACACATTTCCTCAGTGAGAGCAAG +
Preference number: 3 (lower is better)
Translates to: KHTCHFQGALIW*FCTTHFLSESK
Trigger: CTTGCTCTCACTGAGGAAATGTGTTGTACAAAAGCACCAAATAAGGGCACCCTGGAAGTGACATGTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CCA 72 bp ATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGTGTTCATAAGTTACAA +
Preference number: 3 (lower is better)
Translates to: IRTLTCRCPFVF*TQHFTCVHKLQ
Trigger: TTGTAACTTATGAACACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATTCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 3 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHSCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCCATGCCGATGCCCCTTaGTCTTTTGGACTCAACACT +
Preference number: 3 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFHADAP*SFGLNT
Trigger: AGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATG...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR-3UTR CAA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATCTTGCATATGCTACTaGAAAATGAAAGCACGCTTA +
Preference number: 3 (lower is better)
Translates to: NAYASSSPQPYLIRPERKSCICY*KMKARL
Trigger: TAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR TCA 72 bp AAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTaGGTATACCCTCAAAATAAGGATGTGTCCCTTTGT +
Preference number: 3 (lower is better)
Translates to: KQMPWGCKSMIG*VYPQNKDVSLC
Trigger: ACAAAGGGACACATCCTTATTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR TCA 72 bp CAACACGTTGCTATGTGGTCGTTCCAACACCAAATGTaGATATATCTCATCAAAGTCGCACGTAGGCTCATT +
Preference number: 3 (lower is better)
Translates to: QHVAMWSFQHQM*IYLIKVARRLI
Trigger: AATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACCACATAGCAACGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 72 bp ATTCTGAAAGATGCTTATTTCACCTCCACGTCCCCATaGTGTTCATCAGATCACCAGATAAAGTGGATGGAA +
Preference number: 3 (lower is better)
Translates to: ILKDAYFTSTSP*CSSDHQIKWME
Trigger: TTCCATCCACTTTATCTGGTGATCTGATGAACAGCATGGGGACGTGGAGGTGAAATAAGCATCTTTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 72 bp TTGTTTCAGTCAAGTAACTCTTCCAACTGTTTGCCATaGATTTGCAGGTATCTCTACTCTAAGCACTGGGGA +
Preference number: 3 (lower is better)
Translates to: LFQSSNSSNCLP*ICRYLYSKHWG
Trigger: TCCCCAGTGCTTAGAGTAGAGATACCTGCAAATTCATGGCAAACAGTTGGAAGAGTTACTTGACTGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR GCA 72 bp AACGACTTAGAAGAAACACACATGTCACTTCCAGGGTaGCCTTATTTGGTGCTTTTGTACAACACATTTCCT +
Preference number: 3 (lower is better)
Translates to: NDLEETHMSLPG*PYLVLLYNTFP
Trigger: AGGAAATGTGTTGTACAAAAGCACCAAATAAGGGCACCCTGGAAGTGACATGTGTGTTTCTTCTAAGTCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTACAACTGGATGTTTaGCATCCTACAGAGAAGATA +
Preference number: 3 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSLQLDV*HPTEKI
Trigger: TATCTTCTCTGTAGGATGCAAAACATCCAGTTGTAA...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR TCA 72 bp ATTACCTGGTTCAAAGTAACAGTAAGCACTGAATATTaGATGACTTCGACTTCTAGCACATTCTGCCTTTCC +
Preference number: 3 (lower is better)
Translates to: ITWFKVTVSTEY*MTSTSSTFCLS
Trigger: GGAAAGGCAGAATGTGCTAGAAGTCGAAGTCATTCAATATTCAGTGCTTACTGTTACTTTGAACCAGGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR-3UTR CAA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 3 (lower is better)
Translates to: VVTLGSLFGLLHMLLENESCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR TCA 72 bp ATTAAATTCTCTACTATTGACTGGATATTGTCACACTaGGGTGGCTACTTGATGTTATTTTGGAAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: IKFSTIDWILSH*GGYLMLFWKEE
Trigger: CTCTTCCTTCCAAAATAACATCAAGTAGCCACCTCAGTGTGACAATATCCAGTCAATAGTAGAGAATTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp AGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTGCAGGTGAGCACCGACAGTaGCGGCTCTCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RQAAAPTIAYSPGVTQSAGEHRQ*RLSPPG
Trigger: CCCCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACC...TGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp AGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTGCAACTTCCCCAGCCTGGTaGTCTTGCGCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RQAAAPTIAYSPGVTQSATSPAW*SCASCT
Trigger: GGTGCAGGAGGCGCAAGACCACCAGGCTGGGGAAGT...TGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp TCTTCCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTCCGCCAGCAGGCCGATaGGCAGCATCACCACCCATC +
Preference number: 4 (lower is better)
Translates to: SSHHAQVYSPLSLVPEGAPPAGR*AASPPI
Trigger: GATGGGTGGTGATGCTGCTCATCGGCCTGCTGGCGG...AGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp TGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGAGCAGCCGCTGCAGCTaGAAGCACCTCCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: CPQGSGSAGRVLHQRSSRSSRCS*KHLPPL
Trigger: AAGAGGCGGGAGGTGCTTTCAGCTGCAGCGGCTGCT...CCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCCCCCACGCTGCCACGTaGCGCCCTCGGGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECPHAAT*RPRGEA
Trigger: TGCCTCGCCCCGAGGGCGTCACGTGGCAGCGTGGGG...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp CCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTGTACGGTACTTCCCCAGCCTaGTGGTCTTGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PITPRSTPHCRWSQRVLYGTSPA*WSCASC
Trigger: GCAGGAGGCGCAAGACCACCAGGCTGGGGAAGTACC...GTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACGGCTGCGAGCGCCGTaGCATCACCAGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKRLRAP*HHQEAG
Trigger: GCCCGCCTCCTGGTGATGTCACGGCGCTCGCAGCCG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTCATCAGCTACCCACTTaGTGGTCACAGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VLKGQGRLAGFSIKGPPGHQLPT*WSQPPP
Trigger: TGGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATG...ACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp CGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAACCAGCCGGCCGGTCTaGAATGTCATCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: RRGLMSSRVRVGWQGSPSTSRPV*NVIHRP
Trigger: CGGCCTGTGGATGACATTCCAGACCGGCCGGCTGGT...TGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
3UTR CAA 72 bp CTGTCGTTGGTCCCAGAGGGTGCTGTACGGAGGGGATaGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSLVPEGAVRRG*MSSRVRVGWQG
Trigger: ACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp CCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTGTACTGGCAGTCACCACAATaGCCTCCAGCACCGGGTACT +
Preference number: 4 (lower is better)
Translates to: PITPRSTPHCRWSQRVLYWQSPQ*PPAPGT
Trigger: AGTACCCGGTGCTGGAGGTCATTGTGGTGACTGCCA...GTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTGCAAGACCCCAAGCAGGATaGAGGGGAAGAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RQAAAPTIAYSPGVTQSARPQAG*RGRVQP
Trigger: TGGCTGAACTCTTCCCCTTCATCCTGCTTGGGGTCT...TGCAGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp GTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTCGATGTTGCAGCGGATaGAGAGGGTTCCCCACAAGC +
Preference number: 4 (lower is better)
Translates to: VLKGQGRLAGFSIKGPPGRCCSG*RGFPTS
Trigger: GCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCG...ACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCAATTCCCACCATCCTaGCCGCTATCGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCQFPPS*PLSRPQ
Trigger: CTGTGGGCGCGATAGCGGGCAGGATGGTGGGAATTG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TCTTCCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTTGGTCTTGCGCCTCCTaGACCAGGCGATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSHHAQVYSPLSLVPEGAWSCAS*TRRCCS
Trigger: GCTGCAACATCGCCTGGTGCAGGAGGCGCAAGACCA...AGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCGGTCCTCCCGGTACCTaGCAGCTGATTGTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCGPPGT*QLIVPQ
Trigger: CTGAGGCACAATCAGCTGCCAGGTACCGGGAGGACC...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp CGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAGCACTGGCACCCTCTaGCTGATTCACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RRGLMSSRVRVGWQGSPSSTGTL*LIHQQL
Trigger: GAGCTGCTGGTGAATCAGTCAGAGGGTGCCAGTGCT...TGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACCCGCCGGGGCCGCATaGCGTCGGTGGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIPAGAA*RRWPVC
Trigger: GCACACTGGCCACCGACGTCATGCGGCCCCGGCGGG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCTCAGGCGTTTCGCTTaGTGTGTGCAGCTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCLRRFA*CVQLAW
Trigger: CCAGGCAAGCTGCACACATCAAGCGAAACGCCTGAG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCGATGTTGCAGCGGATaGAGAGGGTTCCCCACAAGC +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCRCCSG*RGFPTS
Trigger: GCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCATGCTAATTACACCTaGAGTGCCGCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCHANYT*SAASRP
Trigger: CGGGCGCGATGCGGCACTGCAGGTGTAATTAGCATG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACCAGAAACCCTCGCGCTaGCCGCCCCTCAGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: MAELGLHGRKAVCCGSPHQKPSR*PPLRRF
Trigger: GAAACGCCTGAGGGGCGGCCAGCGCGAGGGTTTCTG...GTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCACTTCCCCAGCCTGGTaGTCTTGCGCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSTSPAW*SCASCT
Trigger: GGTGCAGGAGGCGCAAGACCACCAGGCTGGGGAAGT...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
3UTR CAA 72 bp TCTTCCCATCACGCCCAGGTCTACTCCCCACTGTCGTaGGTCCCAGAGGGTGCTGTACGGAGGGGATTGATG +
Preference number: 4 (lower is better)
Translates to: SSHHAQVYSPLS*VPEGAVRRGLM
Trigger: CATCAATCCCCTCCGTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp TTGATGGATCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATGACCTCCACCAGCCATGCTGGGGATaGAGAGGCCCGACGGGATCT +
Preference number: 4 (lower is better)
Translates to: LMDLSVKAATRAAKNDLHQPCWG*RGPTGS
Trigger: AGATCCCGTCGGGCCTCTTCATCCCCAGCATGGCTG...GTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGATCCATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACCCCGCCGGGGCCGCATaGCGTCGGTGGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDPAGAA*RRWPVC
Trigger: GCACACTGGCCACCGACGTCATGCGGCCCCGGCGGG...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp TTGATGGATCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATGACCTCCACTCATGCTGTCCTGGGTaGGCACCGACAGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LMDLSVKAATRAAKNDLHSCCPG*APTVAA
Trigger: AGCCGCCACTGTCGGTGCTCACCCAGGACAGCATGA...GTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGATCCATCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GCACCAGGCGATGTTGCAGCGGATGAAGAGGGTTCCCCACAAGCCCCCGAAGACGCCACAGGCATATGGTaGAAATACACGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: APGDVAADEEGSPQAPEDATGIW*KYTHQG
Trigger: TCCCTGGTGCGTGTATTTGCACCATATGCCTGTGGC...GTCTTCGGGGGCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCGCCTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGGCACCTCCCGCCTCTTaGCCTCATTCTTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLAPPAS*PHSCCT
Trigger: AGTACAGCAAGAATGAGGGCAAGAGGCGGGAGGTGC...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CCGAGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTATAAGGACGCTGACATaGCGATGCCCCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PRQAAAPTIAYSPGVTQSIRTLT*RCPFVF
Trigger: AAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT...AGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCGGGCCAGCTGCCACATaGCCGTGTAAACACCGACAC +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSGPAAT*PCKHRH
Trigger: GTGTCGGTGTTTACACGGCCATGTGGCAGCTGGCCC...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TACAGCCCTGGCGTGACACAGTCTGCACCGGGTCTGCACCAGTTCCTGAAGATGCATTGCGTACAGCCCTaGCGTGACACAGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: YSPGVTQSAPGLHQFLKMHCVQP*RDTVCT
Trigger: GGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATG...CATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAGGTGAGCACCGACAGTaGCGGCTCTCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIGEHRQ*RLSPPG
Trigger: CCCCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACC...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAATGAAAGCACGCTTATaGCAGGCTGGGGGCATACCG +
Preference number: 4 (lower is better)
Translates to: RRGLMSSRVRVGWQGSPSMKARL*QAGGIP
Trigger: CGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCAT...TGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACAGCCATGCTGGGGATaGAGAGGCCCGACGGGATCT +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKQPCWG*RGPTGS
Trigger: AGATCCCGTCGGGCCTCTTCATCCCCAGCATGGCTG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCGTGGCCAGTGTGCGGTaGGTAAACTCGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSVASVR*VNSSFT
Trigger: CGTGAAGGACGAGTTTACTCACCGCACACTGGCCAC...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAGAAACAGGACGGTCGTaGGCGGACCCACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: LENESTLMAGWGHTGYGPETGRS*ADPLAY
Trigger: GTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTC...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTCCGACCATTTCTaGCACAGGGGACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLSSDHF*HRGHLS
Trigger: AGACAAGTGTCCCCTGTGGCAGAAATGGTCGGAGCT...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GGGTCTGCACCAGTTCCTGAAGATGATCCAGTCATGGTGATGGTAGGCCAGCTGCAATTCCCACCATCCTaGCCGCTATCGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GSAPVPEDDPVMVMVGQLQFPPS*PLSRPQ
Trigger: CTGTGGGCGCGATAGCGGGCAGGATGGTGGGAATTG...CAGCTGGCCTACCATCACCATGACTGGATCATCTTCAGGAACTGGTGCAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTGGCGTGACACAGTCTaGACCGGGTCTGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSWRDTV*TGSAPV
Trigger: AACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCA...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGCGCAGCTCCCACCATTaGGTACAGCCCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRRSSHH*VQPWRD
Trigger: GTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCG...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GACGATTTTGAAGATCAGTGCCAGGGCCAGCTGCCACATGGCCGTGTAAACACCTGGTCTTGCGCCTCCTaGACCAGGCGATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DDFEDQCQGQLPHGRVNTWSCAS*TRRCCS
Trigger: GCTGCAACATCGCCTGGTGCAGGAGGCGCAAGACCA...GGTGTTTACACGGCCATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GCACCAGGCGATGTTGCAGCGGATGAAGAGGGTTCCCCACAAGCCCCCGAAGACTCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: APGDVAADEEGSPQAPEDSNSSS*SPRMPV
Trigger: GACTGGCATCCTGGGACTGCACGATGAACTATTGGA...GTCTTCGGGGGCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCGCCTGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGCCCTTAGCCAGTCGATaGTGTGGAAGTCCTCATACG +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLPLASR*CGSPHT
Trigger: CGTATGAGGACTTCCACACCATCGACTGGCTAAGGG...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCACCCTTAGCCAGTCGATaGTGTGGAAGTCCTCATACG +
Preference number: 4 (lower is better)
Translates to: RRGLMSSRVRVGWQGSPSPLASR*CGSPHT
Trigger: CGTATGAGGACTTCCACACCATCGACTGGCTAAGGG...TGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACAGCTTCAGGGGATGTaGGCTGTTGGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKQLQGM*AVGRQL
Trigger: GAGCTGCCGGCCAACAGCCCACATCCCCTGAAGCTG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGGAGGTGAGGGTCGATaGCCAGAAACCCTCGCGCTG +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVGGEGR*PETLAL
Trigger: CAGCGCGAGGGTTTCTGGCCATCGACCCTCACCTCC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCCTGGCACCCTCTGACTaGTTCACCAGCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECLAPSD*FTSSSD
Trigger: GTCGGAGCTGCTGGTGAATCAGTCAGAGGGTGCCAG...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CCTTCACGTCAAGGAAAGGGTACCCATTTAAGTGGATGTGGGCCTCGTAGATGCAGCAGCCGCTGCAGCTaGAAGCACCTCCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PSRQGKGTHLSGCGPRRCSSRCS*KHLPPL
Trigger: AAGAGGCGGGAGGTGCTTTCAGCTGCAGCGGCTGCT...GCATCTACGAGGCCCACATCCACTTAAATGGGTACCCTTTCCTTGACGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCATGATGACCACCAATaGCACCGTCATCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCHDDHQ*HRHPGN
Trigger: GTTACCAGGATGACGGTGTCATTGGTGGTCATCATG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp TTGATGGATCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATGACCTCCACGTGGCCAGTGTGCGGTaGGTAAACTCGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: LMDLSVKAATRAAKNDLHVASVR*VNSSFT
Trigger: CGTGAAGGACGAGTTTACTCACCGCACACTGGCCAC...GTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGATCCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCACGATGTTGCAGCGGATaGAGAGGGTTCCCCACAAGC +
Preference number: 4 (lower is better)
Translates to: LENESTLMAGWGHTGYGPRCCSG*RGFPTS
Trigger: GCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCG...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAGAAACAGGACGGTCGTaGGCGGACCCACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKETGRS*ADPLAY
Trigger: GTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTC...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTGGAGGGATTCCAACTaGCAACGCATATGCCTCATC +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLWRDSN*QRICLI
Trigger: GATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATCCCCGGGCCCCTGGGTaGGTGGACCACATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNPRAPG*VDHMAE
Trigger: CTCAGCCATGTGGTCCACTCACCCAGGGGCCCGGGG...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCGCACCTCCCGCCTCTTaGCCTCATTCTTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSAPPAS*PHSCCT
Trigger: AGTACAGCAAGAATGAGGGCAAGAGGCGGGAGGTGC...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CCGGTCTGGAATGTCATCCACAGGCCGAGTCATGTTGGGGTCATTGATGTAGTCCATCAGCTACCCACTTaGTGGTCACAGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PVWNVIHRPSHVGVIDVVHQLPT*WSQPPP
Trigger: TGGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATG...GACTACATCAATGACCCCAACATGACTCGGCCTGTGGATGACATTCCAGACCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTTGTGGGCCTCGTAGATaGCTTCTTTCCCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: VLKGQGRLAGFSIKGPPGCGPRR*LLSQMH
Trigger: ATGCATTTGGGAAAGAAGGCATCTACGAGGCCCACA...ACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCCGCGTCACCAGGCACTaGCGAAGCCCCAGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGRVTRH*RSPSFR
Trigger: CCGGAAACTGGGGCTTCGGCAGTGCCTGGTGACGCG...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCATTTACCCACCCACATaGCCCCACAGCAGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCIYPPT*PHSSSK
Trigger: TTTGCTACTGCTGTGGGGGCATGTGGGTGGGTAAAT...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTGTACATAAGGACGCTGACATaGCGATGCCCCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: PITPRSTPHCRWSQRVLYIRTLT*RCPFVF
Trigger: AAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT...GTACAGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR GCA 90 bp TCTTCCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTTCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SSHHAQVYSPLSLVPEGASNSSS*SPRMPV
Trigger: GACTGGCATCCTGGGACTGCACGATGAACTATTGGA...AGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCGGAAGGAAGGCAGTTTaGTGTGGTAGTCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSGRKAV*CGSPHC
Trigger: GCAGTGGGGACTACCACAGCAAACTGCCTTCCTTCC...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTGGTGAGCACCGACAGTaGCGGCTCTCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCGEHRQ*RLSPPG
Trigger: CCCCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACC...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TACAGCCCTGGCGTGACACAGTCTGCACCGGGTCTGCACCAGTTCCTGAAGATGATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: YSPGVTQSAPGLHQFLKMISSLL*ANPMRR
Trigger: GCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGAT...CATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCCTCCTGCCTCTGTCTaGCGTTCTTTATTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCPPASV*RSLLRE
Trigger: TTCTCGCAATAAAGAACGCCAGACAGAGGCAGGAGG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TCTTCCCATCACGCCCAGGTCTACTCCCCACTGTCGTTGGTCCCAGAGGGTGCTATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGT +
Preference number: 4 (lower is better)
Translates to: SSHHAQVYSPLSLVPEGAMCPFV*EETHRS
Trigger: ACTGCGGTGTGTCTCCTCCCATACAAAGGGACACAT...AGCACCCTCTGGGACCAACGACAGTGGGGAGTAGACCTGGGCGTGATGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAACGCTTATGGCAGGCTaGGGGCATACCGGCTATGGC +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKTLMAG*GHTGYG
Trigger: GCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGT...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCACGCTTATGGCAGGCTaGGGGCATACCGGCTATGGC +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVTLMAG*GHTGYG
Trigger: GCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGT...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCGCAGCATGTTCCCCATaGGGTTTGTCTGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECAACSP*GLSEPP
Trigger: CGGGGGCTCAGACAAACCCCATGGGGAACATGCTGC...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTGGCAGTCACCACAATaGCCTCCAGCACCGGGTACT +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVWQSPQ*PPAPGT
Trigger: AGTACCCGGTGCTGGAGGTCATTGTGGTGACTGCCA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AGTGATGGCAGTCACCACAATGACCTCCAGCACCGGGTACTTCCCCAGCCTGGTTCATGTTGGGGTCATTaGTGTAGTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SDGSHHNDLQHRVLPQPGSCWGH*CSHRAG
Trigger: CCCAGCTCTGTGACTACATCAATGACCCCAACATGA...ACCAGGCTGGGGAAGTACCCGGTGCTGGAGGTCATTGTGGTGACTGCCATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGTGGCCAGTGTGCGGTaGGTAAACTCGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVVASVR*VNSSFT
Trigger: CGTGAAGGACGAGTTTACTCACCGCACACTGGCCAC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGCCCGCCGGGGCCGCATaGCGTCGGTGGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLPAGAA*RRWPVC
Trigger: GCACACTGGCCACCGACGTCATGCGGCCCCGGCGGG...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTCTGGGCAAATCCAATaGGGCGCTCGGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVSGQIQ*GARSLW
Trigger: CCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCGGAAGTCCCGGGAGGTaGGGGTCGATGGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGGSPGR*GSMARN
Trigger: GTTTCTGGCCATCGACCCTCACCTCCCGGGACTTCC...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CTCAGACCGGAGGACACTACCAGCACCAGCGTGACTGTCTTGATTAGCAGGGTCAGCTCCGACCATTTCTaGCACAGGGGACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: LRPEDTTSTSVTVLISRVSSDHF*HRGHLS
Trigger: AGACAAGTGTCCCCTGTGGCAGAAATGGTCGGAGCT...GACCCTGCTAATCAAGACAGTCACGCTGGTGCTGGTAGTGTCCTCCGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCCAGCAACAAGCCACGTaGACTAGCGGCCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVQQQAT*TSGPSF
Trigger: GAAGGAAGGGCCGCTAGTGCACGTGGCTTGTTGCTG...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAATGGCGTGACACAGTCTaGACCGGGTCTGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKWRDTV*TGSAPV
Trigger: AACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCA...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCGCCTTCTTTCCCAAATaGATCAGCTACCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCAFFPK*ISYPLA
Trigger: AGCAAGTGGGTAGCTGATGCATTTGGGAAAGAAGGC...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTGTGGGCCTCGTAGATaGCTTCTTTCCCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLCGPRR*LLSQMH
Trigger: ATGCATTTGGGAAAGAAGGCATCTACGAGGCCCACA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCCTCACAATGCCCTCCTaGCTCTGTCTGGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSLTMPS*LCLAFF
Trigger: AAAGAACGCCAGACAGAGGCAGGAGGGCATTGTGAG...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCCGGCCGGTCTGGAATGTCATCCACAGGCCGAGTCATGTTGGGGTCATTGATGAAGCACGCCTCCAATTaGTGCACCAAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: AGRSGMSSTGRVMLGSLMKHASN*CTKGNR
Trigger: TCTGTTGCCTTTGGTGCACCAATTGGAGGCGTGCTT...CATCAATGACCCCAACATGACTCGGCCTGTGGATGACATTCCAGACCGGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAGGCGCTCGGAGTCTCTaGAGACCACCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKGARSL*RPPRGS
Trigger: GCTTCCCCGTGGTGGTCTCCAGAGACTCCGAGCGCC...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TACTCCAGACCCCCGGTTAATTCAAACATGATGACCACCAATGACACCGTCATCGGCGCTCGGAGTCTCTaGAGACCACCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: YSRPPVNSNMMTTNDTVIGARSL*RPPRGS
Trigger: GCTTCCCCGTGGTGGTCTCCAGAGACTCCGAGCGCC...GATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATGGCGCTCGGAGTCTCTaGAGACCACCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHGARSL*RPPRGS
Trigger: GCTTCCCCGTGGTGGTCTCCAGAGACTCCGAGCGCC...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTCCTGGTTTGCCATCTaGGCCATATGTCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLSWFAI*AICLRT
Trigger: TGTTCTGAGACATATGGCCCAGATGGCAAACCAGGA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCACTTCCCCAGCCTGGTaGTCTTGCGCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGTSPAW*SCASCT
Trigger: GGTGCAGGAGGCGCAAGACCACCAGGCTGGGGAAGT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAGAGCCCCCGGGCCCCTaGGTGAGTGGACCACATGGC +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKEPPGP*VSGPHG
Trigger: GCCATGTGGTCCACTCACCCAGGGGCCCGGGGGCTC...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp CGGAGGGGATTGATGTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCATGCCAAGAAGTCTCCTaGCCCCATATCCTCTGTATT +
Preference number: 4 (lower is better)
Translates to: RRGLMSSRVRVGWQGSPSCQEVS*PHILCI
Trigger: AATACAGAGGATATGGGGCCAGGAGACTTCTTGGCA...TGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGACATCAATCCCCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACCCGCCAGCAGGCCGATaGGCAGCATCACCACCCATC +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDPPAGR*AASPPI
Trigger: GATGGGTGGTGATGCTGCTCATCGGCCTGCTGGCGG...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCAGCCATGCTGGGGATaGAGAGGCCCGACGGGATCT +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHQPCWG*RGPTGS
Trigger: AGATCCCGTCGGGCCTCTTCATCCCCAGCATGGCTG...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAACCCGCCGGGGCCGCATaGCGTCGGTGGCCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENEPAGAA*RRWPVC
Trigger: GCACACTGGCCACCGACGTCATGCGGCCCCGGCGGG...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATTCATGCTGTCCTGGGTaGGCACCGACAGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHSCCPG*APTVAA
Trigger: AGCCGCCACTGTCGGTGCTCACCCAGGACAGCATGA...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACCTGCTCCTTTGGGTTaGGGGTCTAATGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKPAPLG*GSNGGR
Trigger: TCTGCCTCCATTAGACCCTCAACCCAAAGGAGCAGG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCGAAACAGGACGGTCGTaGGCGGACCCACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVETGRS*ADPLAY
Trigger: GTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTC...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACAAGGTCCCCCTCGGTaGCCTTGGCCCGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIQGPPR*PWPGSI
Trigger: TATGCTTCCGGGCCAAGGTCACCGAGGGGGACCTTG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGCACCTCCCGCCTCTTaGCCTCATTCTTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVAPPAS*PHSCCT
Trigger: AGTACAGCAAGAATGAGGGCAAGAGGCGGGAGGTGC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCATCAGCTACCCACTTaGTGGTCACAGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVHQLPT*WSQPPP
Trigger: TGGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATG...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGTTTCGCTTGATGTGTaGAGCTTGCCTGGCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVVSLDV*SLPGLP
Trigger: CGGAAGGCCAGGCAAGCTGCACACATCAAGCGAAAC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCTGGTCTTGCGCCTCCTaGACCAGGCGATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGWSCAS*TRRCCS
Trigger: GCTGCAACATCGCCTGGTGCAGGAGGCGCAAGACCA...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACCGCGGCCGCCCACCTaGACAGCATCCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKPRPPT*TASSSI
Trigger: GATGCTCGAGGATGCTGTCCAGGTGGGCGGCCGCGG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTCCGCGGCCGCCCACCTaGACAGCATCCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLPRPPT*TASSSI
Trigger: GATGCTCGAGGATGCTGTCCAGGTGGGCGGCCGCGG...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CCTTCACGTCAAGGAAAGGGTACCCATTTAAGTGGATGTGGGCCTCGTAGATGCACAGTCATGCTGTCCTaGGTGAGCACCGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSRQGKGTHLSGCGPRRCTVMLS*VSTDSG
Trigger: GCCACTGTCGGTGCTCACCCAGGACAGCATGACTGT...GCATCTACGAGGCCCACATCCACTTAAATGGGTACCCTTTCCTTGACGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCCCTCCTGCCTCTGTCTaGCGTTCTTTATTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSPPASV*RSLLRE
Trigger: TTCTCGCAATAAAGAACGCCAGACAGAGGCAGGAGG...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCAGCTTCAGGGGATGTaGGCTGTTGGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHQLQGM*AVGRQL
Trigger: GAGCTGCCGGCCAACAGCCCACATCCCCTGAAGCTG...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAACTTCCCCAGCCTGGTaGTCTTGCGCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCITSPAW*SCASCT
Trigger: GGTGCAGGAGGCGCAAGACCACCAGGCTGGGGAAGT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACCGCCAGCAGGCCGATaGGCAGCATCACCACCCATC +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARPPAGR*AASPPI
Trigger: GATGGGTGGTGATGCTGCTCATCGGCCTGCTGGCGG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACTGGCACCCTCTGACTaGTTCACCAGCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCILAPSD*FTSSSD
Trigger: GTCGGAGCTGCTGGTGAATCAGTCAGAGGGTGCCAG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATAGCAGCCGCTGCAGCTaGAAGCACCTCCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNSSRCS*KHLPPL
Trigger: AAGAGGCGGGAGGTGCTTTCAGCTGCAGCGGCTGCT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACAGCAGCCGCTGCAGCTaGAAGCACCTCCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDSSRCS*KHLPPL
Trigger: AAGAGGCGGGAGGTGCTTTCAGCTGCAGCGGCTGCT...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCTCATGCTGTCCTGGGTaGGCACCGACAGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPSCCPG*APTVAA
Trigger: AGCCGCCACTGTCGGTGCTCACCCAGGACAGCATGA...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCCGATGTTGCAGCGGATaGAGAGGGTTCCCCACAAGC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGRCCSG*RGFPTS
Trigger: GCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCG...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACACCATCTTGCAACTCTaGGGCAATAAGCCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: MAELGLHGRKAVCCGSPHTILQL*GNKPED
Trigger: GTCCTCTGGCTTATTGCCTCAGAGTTGCAAGATGGT...GTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCCTGTACGGAGGGGATTaGTGTCCTCAAGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGLYGGD*CPQGSG
Trigger: CCCTGACCCTTGAGGACATCAATCCCCTCCGTACAG...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTCGCGTCACCAGGCACTaGCGAAGCCCCAGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLRVTRH*RSPSFR
Trigger: CCGGAAACTGGGGCTTCGGCAGTGCCTGGTGACGCG...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACGCGTCACCAGGCACTaGCGAAGCCCCAGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARRVTRH*RSPSFR
Trigger: CCGGAAACTGGGGCTTCGGCAGTGCCTGGTGACGCG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAATTGATGTGTGCAGCTTaGCTGGCCTTCCGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKLMCAA*LAFRFQ
Trigger: CTGAAAGCGGAAGGCCAGGCAAGCTGCACACATCAA...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAATTTACCCACCCACATaGCCCCACAGCAGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: LENESTLMAGWGHTGYGPIYPPT*PHSSSK
Trigger: TTTGCTACTGCTGTGGGGGCATGTGGGTGGGTAAAT...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCCACCGCAGTACTGTATaGTCCAATAGTTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSHRSTV*SNSSSC
Trigger: GCACGATGAACTATTGGAGCATACAGTACTGCGGTG...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTCTCTGGGGAAGCTTTaGTTTCCTGATAGACATTGT +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCSLGKL*FPDRHC
Trigger: ACAATGTCTATCAGGAAAGCAAAGCTTCCCCAGAGA...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCCCGCGGCCGCCCACCTaGACAGCATCCTCGAGCATC +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPPRPPT*TASSSI
Trigger: GATGCTCGAGGATGCTGTCCAGGTGGGCGGCCGCGG...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CTCAGACCGGAGGACACTACCAGCACCAGCGTGACTGTCTTGATTAGCAGGGTCAATGGTCTTTATCTCTaGTATGCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: LRPEDTTSTSVTVLISRVNGLYL*YARATG
Trigger: GCCTGTGGCTCTGGCATACCAGAGATAAAGACCATT...GACCCTGCTAATCAAGACAGTCACGCTGGTGCTGGTAGTGTCCTCCGGTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACAACCAGCCGGCCGGTCTaGAATGTCATCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTTSRPV*NVIHRP
Trigger: CGGCCTGTGGATGACATTCCAGACCGGCCGGCTGGT...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATACCAGCCGGCCGGTCTaGAATGTCATCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNTSRPV*NVIHRP
Trigger: CGGCCTGTGGATGACATTCCAGACCGGCCGGCTGGT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAGGGCCAGCTGCCACATaGCCGTGTAAACACCGACAC +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIGPAAT*PCKHRH
Trigger: GTGTCGGTGTTTACACGGCCATGTGGCAGCTGGCCC...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGAGGCGCTCGGAGTCTCTaGAGACCACCACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARGARSL*RPPRGS
Trigger: GCTTCCCCGTGGTGGTCTCCAGAGACTCCGAGCGCC...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATGGTACTTCCCCAGCCTaGTGGTCTTGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNGTSPA*WSCASC
Trigger: GCAGGAGGCGCAAGACCACCAGGCTGGGGAAGTACC...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCACTCCCCACTGTCGTTaGTCCCAGAGGGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGTPHCR*SQRVLY
Trigger: GTACAGCACCCTCTGGGACCAACGACAGTGGGGAGT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCTGGCACCCTCTGACTaGTTCACCAGCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPLAPSD*FTSSSD
Trigger: GTCGGAGCTGCTGGTGAATCAGTCAGAGGGTGCCAG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTCATGTTGGGGTCATTaGTGTAGTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVSCWGH*CSHRAG
Trigger: CCCAGCTCTGTGACTACATCAATGACCCCAACATGA...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTTAGGAAACACAGCTTaGAACTCATACGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLLGNTA*NSYGVK
Trigger: TTTAACCCCGTATGAGTTTCAAGCTGTGTTTCCTAA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTGTTGGTTCAGAAACTaGTGGATAAGCCAGATAACA +
Preference number: 4 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLCWFRN*WISQIT
Trigger: TGTTATCTGGCTTATCCATCAGTTTCTGAACCAACA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCTGGAGGGATTCCAACTaGCAACGCATATGCCTCATC +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECWRDSN*QRICLI
Trigger: GATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCA...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCATGACAAGGACACGATaGTGGCATCCAATACAGCAA +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSMTRTR*WHPIQQ
Trigger: TTGCTGTATTGGATGCCATCATCGTGTCCTTGTCAT...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCAGTGGACCACATGGCTaGGTTAGGACTCCACGGAAG +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGSGPHG*VRTPRK
Trigger: CTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCACT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCGCACTGAATATTGAATaGCTTCGACTTCTAGCACAT +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCALNIE*LRLLAH
Trigger: ATGTGCTAGAAGTCGAAGTCATTCAATATTCAGTGC...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCGAAGAGGCAAATCTCTaGCTGATTCACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECEEANL*LIHQQL
Trigger: GAGCTGCTGGTGAATCAGTCAGAGATTTGCCTCTTC...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421085.7
CDS-3UTR GCA 90 bp ATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: MAELGLHGRKAVCCGSPHEVQQH*SWLYQK
Trigger: CTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTC...GTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCGATTTTGAAGATCAGTaGCAGGGCCAGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECDFEDQ*QGQLPH
Trigger: ATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATC...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGCGCAGCTCCCACCATTaGGTACAGCCCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQRSSHH*VQPWRD
Trigger: GTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCG...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACGCAGCTCCCACCATTaGGTACAGCCCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKRSSHH*VQPWRD
Trigger: GTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TTGATGGATCTCAGCGTAAAGGCCGCCACCAGGGCTGCGAAAAATGACCTCCACGCCTTCTTTCCCAAATaGATCAGCTACCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LMDLSVKAATRAAKNDLHAFFPK*ISYPLA
Trigger: AGCAAGTGGGTAGCTGATGCATTTGGGAAAGAAGGC...GTGGAGGTCATTTTTCGCAGCCCTGGTGGCGGCCTTTACGCTGAGATCCATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCCGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCGTAGACCCAGGCCCCTaGCTTTGTGTAACTGTACCC +
Preference number: 4 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVVDPGP*LCVTVP
Trigger: GGGTACAGTTACACAAAGGCAGGGGCCTGGGTCTAC...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACAGCAACACTGCTCATaGCTATACCAGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKQQHCS*LYQKAD
Trigger: GTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTACCAGCCGGCCGGTCTaGAATGTCATCCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCTSRPV*NVIHRP
Trigger: CGGCCTGTGGATGACATTCCAGACCGGCCGGCTGGT...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCATTGCGTACAGCCCTaGCGTGACACAGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHHCVQP*RDTVCT
Trigger: GGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATG...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATGGTGAGCACCGACAGTaGCGGCTCTCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHGEHRQ*RLSPPG
Trigger: CCCCGGCGGGGAGAGCCGCCACTGTCGGTGCTCACC...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAACAGTCATGCTGTCCTaGGTGAGCACCGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKTVMLS*VSTDSG
Trigger: GCCACTGTCGGTGCTCACCCAGGACAGCATGACTGT...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCAGCTTCAGGGGATGTaGGCTGTTGGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCQLQGM*AVGRQL
Trigger: GAGCTGCCGGCCAACAGCCCACATCCCCTGAAGCTG...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 4 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSCPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGT +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVMCPFV*EETHRS
Trigger: ACTGCGGTGTGTCTCCTCCCATACAAAGGGACACAT...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGAGAGCAAATACCCTTaGGATCCCTACCCAACTACG +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVESKYP*DPYPTT
Trigger: CGTAGTTGGGTAGGGATCCCAAGGGTATTTGCTCTC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGCCGCCAGCAGGCCGATaGGCAGCATCACCACCCATC +
Preference number: 4 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLPPAGR*AASPPI
Trigger: GATGGGTGGTGATGCTGCTCATCGGCCTGCTGGCGG...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCTGGCAGTCACCACAATaGCCTCCAGCACCGGGTACT +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPWQSPQ*PPAPGT
Trigger: AGTACCCGGTGCTGGAGGTCATTGTGGTGACTGCCA...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACATCTGGGCAAATCCAATaGGGCGCTCGGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTSGQIQ*GARSLW
Trigger: CCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGA...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CCTTCACGTCAAGGAAAGGGTACCCATTTAAGTGGATGTGGGCCTCGTAGATGCTGGAGGGATTCCAACTaGCAACGCATATGCCTCATC +
Preference number: 4 (lower is better)
Translates to: PSRQGKGTHLSGCGPRRCWRDSN*QRICLI
Trigger: GATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCA...GCATCTACGAGGCCCACATCCACTTAAATGGGTACCCTTTCCTTGACGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCATGCTAATTACACCTaGAGTGCCGCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPHANYT*SAASRP
Trigger: CGGGCGCGATGCGGCACTGCAGGTGTAATTAGCATG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCAGCTCCGACCATTTCTaGCACAGGGGACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGSSDHF*HRGHLS
Trigger: AGACAAGTGTCCCCTGTGGCAGAAATGGTCGGAGCT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGCAATTCCCACCATCCTaGCCGCTATCGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQQFPPS*PLSRPQ
Trigger: CTGTGGGCGCGATAGCGGGCAGGATGGTGGGAATTG...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACAATTCCCACCATCCTaGCCGCTATCGCGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARQFPPS*PLSRPQ
Trigger: CTGTGGGCGCGATAGCGGGCAGGATGGTGGGAATTG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAATGTGGGCCTCGTAGATaGCTTCTTTCCCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKCGPRR*LLSQMH
Trigger: ATGCATTTGGGAAAGAAGGCATCTACGAGGCCCACA...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCTCACAATGCCCTCCTaGCTCTGTCTGGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVLTMPS*LCLAFF
Trigger: AAAGAACGCCAGACAGAGGCAGGAGGGCATTGTGAG...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AATACACGCACCAGGGAGACAGCCAAAAATGCAAACAGCAGCGCCCATAGGATGACGCTGACATGCCGATaGCCCTTTGTCTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: NTRTRETAKNANSSAHRMTLTCR*PFVFWT
Trigger: AGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGT...CATCCTATGGGCGCTGCTGTTTGCATTTTTGGCTGTCTCCCTGGTGCGTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GGGTCTGCACCAGTTCCTGAAGATGATCCAGTCATGGTGATGGTAGGCCAGCTGACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GSAPVPEDDPVMVMVGQLTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...CAGCTGGCCTACCATCACCATGACTGGATCATCTTCAGGAACTGGTGCAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTATGTCACTTCCAGGGTaGCCTTATTTGGTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGMSLPG*PYLVLL
Trigger: CAAAAGCACCAAATAAGGGCACCCTGGAAGTGACAT...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGAATGGTCTTTATCTCTaGTATGCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRNGLYL*YARATG
Trigger: GCCTGTGGCTCTGGCATACCAGAGATAAAGACCATT...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCGGTACTTCCCCAGCCTaGTGGTCTTGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPGTSPA*WSCASC
Trigger: GCAGGAGGCGCAAGACCACCAGGCTGGGGAAGTACC...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTGGTACTTCCCCAGCCTaGTGGTCTTGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSGTSPA*WSCASC
Trigger: GCAGGAGGCGCAAGACCACCAGGCTGGGGAAGTACC...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAATGAAAGCACGCTTATaGCAGGCTGGGGGCATACCG +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIMKARL*QAGGIP
Trigger: CGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCAT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCAAGAGAAAGGGCAAGTaGGATAATCTTACTTACACA +
Preference number: 4 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCKRKGK*DNLTYT
Trigger: TGTGTAAGTAAGATTATCCCACTTGCCCTTTCTCTT...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATCCACGGCGAGATCGATaGCCCCAGCCAAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHPRRDR*PQPRCP
Trigger: CGGGCACCTTGGCTGGGGTCATCGATCTCGCCGTGG...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR TCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTTGGCAGTCACCACAATaGCCTCCAGCACCGGGTACT +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCWQSPQ*PPAPGT
Trigger: AGTACCCGGTGCTGGAGGTCATTGTGGTGACTGCCA...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTTCTGGGCAAATCCAATaGGGCGCTCGGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLSGQIQ*GARSLW
Trigger: CCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGA...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATAGACCCCAAGCAGGATaGAGGGGAAGAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNRPQAG*RGRVQP
Trigger: TGGCTGAACTCTTCCCCTTCATCCTGCTTGGGGTCT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CTCAGACCGGAGGACACTACCAGCACCAGCGTGACTGTCTTGATTAGCAGGGTCTACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: LRPEDTTSTSVTVLISRVYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...GACCCTGCTAATCAAGACAGTCACGCTGGTGCTGGTAGTGTCCTCCGGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTGAAACAGGACGGTCGTaGGCGGACCCACTGGCATAC +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLETGRS*ADPLAY
Trigger: GTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTC...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCTCCCTAAAAGCCACATaGGCATCATGCAATCGCAGG +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGSLKAT*ASCNRR
Trigger: CCTGCGATTGCATGATGCTCATGTGGCTTTTAGGGA...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAACTTCAGCGCGACGGCTaGGAGCGCCGTGACATCACC +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENELQRDG*ERRDIT
Trigger: GGTGATGTCACGGCGCTCGCAGCCGTCGCGCTGAAG...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCACATGCTAATTACACCTaGAGTGCCGCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSHANYT*SAASRP
Trigger: CGGGCGCGATGCGGCACTGCAGGTGTAATTAGCATG...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACATGCTAATTACACCTaGAGTGCCGCATCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARHANYT*SAASRP
Trigger: CGGGCGCGATGCGGCACTGCAGGTGTAATTAGCATG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGCAGCAACAAGCCACGTaGACTAGCGGCCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQQQQAT*TSGPSF
Trigger: GAAGGAAGGGCCGCTAGTGCACGTGGCTTGTTGCTG...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCCATCAGCTACCCACTTaGTGGTCACAGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFHQLPT*WSQPPP
Trigger: TGGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATG...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp TACTCCAGACCCCCGGTTAATTCAAACATGATGACCACCAATGACACCGTCATCTGGAATTGCTCACAATaGCCTCCTGCCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: YSRPPVNSNMMTTNDTVIWNCSQ*PPASVW
Trigger: CCAGACAGAGGCAGGAGGGCATTGTGAGCAATTCCA...GATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAACGCGTCACCAGGCACTaGCGAAGCCCCAGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENERVTRH*RSPSFR
Trigger: CCGGAAACTGGGGCTTCGGCAGTGCCTGGTGACGCG...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GACGATTTTGAAGATCAGTGCCAGGGCCAGCTGCCACATGGCCGTGTAAACACCTTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: DDFEDQCQGQLPHGRVNTFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...GGTGTTTACACGGCCATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATTTACCCACCCACATaGCCCCACAGCAGTAGCAAA +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGIYPPT*PHSSSK
Trigger: TTTGCTACTGCTGTGGGGGCATGTGGGTGGGTAAAT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGTTCAGGAACCATCTTaGAACTCTGAGGCAATAAGC +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVVQEPS*NSEAIS
Trigger: GCTTATTGCCTCAGAGTTGCAAGATGGTTCCTGAAC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATGTGGTAGTCCCCACTaGAGACTCCTCATCCTTGAC +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKCGSPH*RLLILD
Trigger: GTCAAGGATGAGGAGTCTGCAGTGGGGACTACCACA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACCCTTAGCCAGTCGATaGTGTGGAAGTCCTCATACG +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIPLASR*CGSPHT
Trigger: CGTATGAGGACTTCCACACCATCGACTGGCTAAGGG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTGGGCCAGCTGCCACATaGCCGTGTAAACACCGACAC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSGPAAT*PCKHRH
Trigger: GTGTCGGTGTTTACACGGCCATGTGGCAGCTGGCCC...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCTCCTGCCTCTGTCTaGCGTTCTTTATTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVPPASV*RSLLRE
Trigger: TTCTCGCAATAAAGAACGCCAGACAGAGGCAGGAGG...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGT +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGMCPFV*EETHRS
Trigger: ACTGCGGTGTGTCTCCTCCCATACAAAGGGACACAT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAGCACTGGCACCCTCTaGCTGATTCACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSSTGTL*LIHQQL
Trigger: GAGCTGCTGGTGAATCAGTCAGAGGGTGCCAGTGCT...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 4 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp TCCGACCATTTCTGCCACAGGGGACACTTGTCTCTGTCCTCAAAAGTGGTCTCGGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: SDHFCHRGHLSLSSKVVSGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...CGAGACCACTTTTGAGGACAGAGACAAGTGTCCCCTGTGGCAGAAATGGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR TCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTACTCTGGCCTTCTATTaGGGAGAGCCTGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCTLAFY*GEPEPH
Trigger: GTGGGGTTCAGGCTCTCCTCAATAGAAGGCCAGAGT...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACAGGCAAATCTCTGACTaGTTCACCAGCAGCTCCGAC +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDRQISD*FTSSSD
Trigger: GTCGGAGCTGCTGGTGAATCAGTCAGAGATTTGCCT...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421085.7
CDS-3UTR GCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTCAGCAACAAGCCACGTaGACTAGCGGCCCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLQQQAT*TSGPSF
Trigger: GAAGGAAGGGCCGCTAGTGCACGTGGCTTGTTGCTG...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTGGCGTGACACAGTCTaGACCGGGTCTGCACCAGTT +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSWRDTV*TGSAPV
Trigger: AACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATGCTACCGAAATCTCCTaGTCCTTTGGGTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNATEIS*SFGLRV
Trigger: GACCCTCAACCCAAAGGAGCAGGAGATTTCGGTAGC...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAGCCTGTTTGGACTCTTaGATATGCTACTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: LENESTLMAGWGHTGYGPACLDS*ICYLKM
Trigger: CATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCAGCAACACTGCTCATaGCTATACCAGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHQQHCS*LYQKAD
Trigger: GTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTG...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAAAGCACGCCTCCAATTaGTGCACCAAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIKHASN*CTKGNR
Trigger: TCTGTTGCCTTTGGTGCACCAATTGGAGGCGTGCTT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATAAGCACGCCTCCAATTaGTGCACCAAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHKHASN*CTKGNR
Trigger: TCTGTTGCCTTTGGTGCACCAATTGGAGGCGTGCTT...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTCATTGCGTACAGCCCTaGCGTGACACAGTCTGCACC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSHCVQP*RDTVCT
Trigger: GGTGCAGACTGTGTCACGCCAGGGCTGTACGCAATG...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCACAGTCATGCTGTCCTaGGTGAGCACCGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPTVMLS*VSTDSG
Trigger: GCCACTGTCGGTGCTCACCCAGGACAGCATGACTGT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNISSLL*ANPMRR
Trigger: GCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGAT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCTCCTGGTTTGCCATCTaGGCCATATGTCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVSWFAI*AICLRT
Trigger: TGTTCTGAGACATATGGCCCAGATGGCAAACCAGGA...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATGAGGTGTGCGCGGGGTaGGGGGAAGACCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHEVCAG*GEDPGS
Trigger: ACTTCCAGGGTCTTCCCCCCACCCCGCGCACACCTC...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACGTGAGCGGACCCACTaGCATACTTGCAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARRERTH*HTCSFH
Trigger: GTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGACGCTTATGGCAGGCTaGGGGCATACCGGCTATGGC +
Preference number: 4 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLTLMAG*GHTGYG
Trigger: GCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGT...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAGGGTCAGGGTCGGCTaGCAGGGTTCTCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSRVRVG*QGSPSK
Trigger: CTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCT...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR TCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATTCATGTTGGGGTCATTaGTGTAGTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNSCWGH*CSHRAG
Trigger: CCCAGCTCTGTGACTACATCAATGACCCCAACATGA...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCATGATGACCACCAATaGCACCGTCATCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPHDDHQ*HRHPGN
Trigger: GTTACCAGGATGACGGTGTCATTGGTGGTCATCATG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCTTAGGAAACACAGCTTaGAACTCATACGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECLGNTA*NSYGVK
Trigger: TTTAACCCCGTATGAGTTTCAAGCTGTGTTTCCTAA...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCTGTTGGTTCAGAAACTaGTGGATAAGCCAGATAACA +
Preference number: 4 (lower is better)
Translates to: GGIPAMAHGSAELINIECCWFRN*WISQIT
Trigger: TGTTATCTGGCTTATCCATCAGTTTCTGAACCAACA...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAATGTTGGTTCAGAAACTaGTGGATAAGCCAGATAACA +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKCWFRN*WISQIT
Trigger: TGTTATCTGGCTTATCCATCAGTTTCTGAACCAACA...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACGCAAACTTCCCCTCCTaGAGACCAACACTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDANFPS*RPTLFL
Trigger: AAGGAAGAGTGTTGGTCTTCAGGAGGGGAAGTTTGC...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAAACACATTTCCTCAGTaGGAGCAAGAAACATGTGAT +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKNTFPQ*EQETCD
Trigger: ATCACATGTTTCTTGCTCTCACTGAGGAAATGTGTT...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTCCACGGCGAGATCGATaGCCCCAGCCAAGGTGCCTA +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSPRRDR*PQPRCL
Trigger: TAGGCACCTTGGCTGGGGTCATCGATCTCGCCGTGG...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp TACTCCAGACCCCCGGTTAATTCAAACATGATGACCACCAATGACACCGTCATCGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: YSRPPVNSNMMTTNDTVIEVQQH*SWLYQK
Trigger: CTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTC...GATGACGGTGTCATTGGTGGTCATCATGTTTGAATTAACCGGGGGTCTGGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAGCCACAGGCATATGGTaGAAATACACGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKATGIW*KYTHQG
Trigger: TCCCTGGTGCGTGTATTTGCACCATATGCCTGTGGC...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTCGCAGCTCCCACCATTaGGTACAGCCCTGGCGTGAC +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSRSSHH*VQPWRD
Trigger: GTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCG...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACTCACAATGCCCTCCTaGCTCTGTCTGGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKLTMPS*LCLAFF
Trigger: AAAGAACGCCAGACAGAGGCAGGAGGGCATTGTGAG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTTGGAATTGCTCACAATaGCCTCCTGCCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCWNCSQ*PPASVW
Trigger: CCAGACAGAGGCAGGAGGGCATTGTGAGCAATTCCA...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACATCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTSNSSS*SPRMPV
Trigger: GACTGGCATCCTGGGACTGCACGATGAACTATTGGA...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGGCCTGTTTGGACTCTTaGATATGCTACTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRACLDS*ICYLKM
Trigger: CATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTACCTCCACGTCCCCATaGTGTTCATCAGATCACCAG +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCTSTSP*CSSDHQ
Trigger: CTGGTGATCTGATGAACAGCATGGGGACGTGGAGGT...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAGCCAGTCGATGGTGTaGAAGTCCTCATACGTCCCC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSSQSMV*KSSYVP
Trigger: GGGGACGTATGAGGACTTCCACACCATCGACTGGCT...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCAGCAACACTGCTCATaGCTATACCAGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPQQHCS*LYQKAD
Trigger: GTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACAAAGCACGCCTCCAATTaGTGCACCAAAGGCAACAGA +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTKHASN*CTKGNR
Trigger: TCTGTTGCCTTTGGTGCACCAATTGGAGGCGTGCTT...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCGGGCCAGCTGCCACATaGCCGTGTAAACACCGACAC +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFGPAAT*PCKHRH
Trigger: GTGTCGGTGTTTACACGGCCATGTGGCAGCTGGCCC...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATCAGCTTCAGGGGATGTaGGCTGTTGGCCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHQLQGM*AVGRQL
Trigger: GAGCTGCCGGCCAACAGCCCACATCCCCTGAAGCTG...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGATGTGTGCAGCTTGCCTaGCCTTCCGCTTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARCVQLA*PSAFRF
Trigger: GAATCTGAAAGCGGAAGGCCAGGCAAGCTGCACACA...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTCGTGAGCGGACCCACTaGCATACTTGCAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSRERTH*HTCSFH
Trigger: GTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACG...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAATTATGGAGACAGTCCTaGAGTACCCCCTCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKLWRQS*STPSQG
Trigger: ACCCTGAGAGGGGGTACTCCAGGACTGTCTCCATAA...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATCCCAATGATGTTATaGAGACAGTCCTGGAGTACC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGIPMML*RQSWST
Trigger: GGTACTCCAGGACTGTCTCCATAACATCATTGGGAT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp ATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACATTGTCACACTGAGGTaGCTACTTGATGTTATTTTG +
Preference number: 4 (lower is better)
Translates to: MAELGLHGRKAVCCGSPHIVTLR*LLDVIL
Trigger: CAAAATAACATCAAGTAGCCACCTCAGTGTGACAAT...GTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGCCACCTGTCCAACTCTaGCCTTCTATTGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQPPVQL*PSIEES
Trigger: GCTCTCCTCAATAGAAGGCCAGAGTTGGACAGGTGG...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCCAACACGTTGCTATGTaGTCGTTCCAACACCAAATG +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGQHVAM*SFQHQM
Trigger: CATTTGGTGTTGGAACGACCACATAGCAACGTGTTG...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCGTGGCCAGTGTGCGGTaGGTAAACTCGTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFVASVR*VNSSFT
Trigger: CGTGAAGGACGAGTTTACTCACCGCACACTGGCCAC...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTCTGGGCAAATCCAATaGGGCGCTCGGAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFSGQIQ*GARSLW
Trigger: CCAGAGACTCCGAGCGCCTCATTGGATTTGCCCAGA...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 4 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 4 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGTGGAGGGATTCCAACTaGCAACGCATATGCCTCATC +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQWRDSN*QRICLI
Trigger: GATGAGGCATATGCGTTGTCAGTTGGAATCCCTCCA...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAACCGGAAGGGCAATaGCAAGGACACGATGATGGC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSKPEGQ*QGHDDG
Trigger: GCCATCATCGTGTCCTTGTCATTGCCCTTCCGGTTT...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPEVQQH*SWLYQK
Trigger: CTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTC...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTGCCACAGGCATATGGTaGAAATACACGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSATGIW*KYTHQG
Trigger: TCCCTGGTGCGTGTATTTGCACCATATGCCTGTGGC...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACGCCTTCTTTCCCAAATaGATCAGCTACCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDAFFPK*ISYPLA
Trigger: AGCAAGTGGGTAGCTGATGCATTTGGGAAAGAAGGC...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCGCCTTCTTTCCCAAATaGATCAGCTACCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPAFFPK*ISYPLA
Trigger: AGCAAGTGGGTAGCTGATGCATTTGGGAAAGAAGGC...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTGGAATTGCTCACAATaGCCTCCTGCCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSWNCSQ*PPASVW
Trigger: CCAGACAGAGGCAGGAGGGCATTGTGAGCAATTCCA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTGGTCTTGCGCCTCCTaGACCAGGCGATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHWSCAS*TRRCCS
Trigger: GCTGCAACATCGCCTGGTGCAGGAGGCGCAAGACCA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGAACGCTGACATGCCGATaGCCCTTTGTCTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARTLTCR*PFVFWT
Trigger: AGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGT...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTACGCTGACATGCCGATaGCCCTTTGTCTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLTLTCR*PFVFWT
Trigger: AGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGT...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTCGTGCAGTCCCAGGATaGCAGTCTTGCATAGAGAAA +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLRAVPG*QSCIEK
Trigger: TTTCTCTATGCAAGACTGGCATCCTGGGACTGCACG...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTCCCTTAGCCAGTCGATaGTGTGGAAGTCCTCATACG +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSPLASR*CGSPHT
Trigger: CGTATGAGGACTTCCACACCATCGACTGGCTAAGGG...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACAGCAACACTGCTCATaGCTATACCAGAAGGCAGAC +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKQQHCS*LYQKAD
Trigger: GTCTGCCTTCTGGTATAGCCATGAGCAGTGTTGCTG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHCPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCACTTATACATTACAACTaGATGTTTTGCATCCTACAG +
Preference number: 4 (lower is better)
Translates to: LENESTLMAGWGHTGYGPLIHYN*MFCILQ
Trigger: CTGTAGGATGCAAAACATCCAGTTGTAATGTATAAG...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR CCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTCTACTCTAAGCACTaGGGAGGACACAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTLYSKH*GGHKSQ
Trigger: TTGGGATTTGTGTCCTCCCCAGTGCTTAGAGTAGAG...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTCATGATGACCACCAATaGCACCGTCATCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLHDDHQ*HRHPGN
Trigger: GTTACCAGGATGACGGTGTCATTGGTGGTCATCATG...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGACCCCAAGCAGGATaGAGGGGAAGAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENERPQAG*RGRVQP
Trigger: TGGCTGAACTCTTCCCCTTCATCCTGCTTGGGGTCT...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAATGGAAGTGCTGAGCTaGTCAATATTGAATGCATGG +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKMEVLS*SILNAW
Trigger: CCATGCATTCAATATTGATCAGCTCAGCACTTCCAT...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAATGCTGTGGTTTCACTaGCCTTTGGCTATCTTTTCA +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKMLWFH*PLAIFS
Trigger: TGAAAAGATAGCCAAAGGTCAGTGAAACCACAGCAT...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATCCAACTGTTTGCCATaGATTTGCAGGTATCTCTAC +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKSNCLP*ICRYLY
Trigger: GTAGAGATACCTGCAAATTCATGGCAAACAGTTGGA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAGAAGTCCAGCAACACTaGTCATGGCTATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKEVQQH*SWLYQK
Trigger: CTTCTGGTATAGCCATGAGCAGTGTTGCTGGACTTC...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCTGGCGTTCTTTATTaGGAGAATCAGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDSGVLY*ENQFPP
Trigger: AGGAGGGAACTGATTCTCGCAATAAAGAACGCCAGA...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: NAYASSSPQPYLIRPERKFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCTTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGLSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGACACCGCAGTACTGTATaGTCCAATAGTTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARHRSTV*SNSSSC
Trigger: GCACGATGAACTATTGGAGCATACAGTACTGCGGTG...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTTGTACCTAGTTGCTTaGCTCTCCCTTCCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSLYLVA*LSLPLP
Trigger: GGGAAGAGGAAGGGAGAGGCAAGCAACTAGGTACAA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCCCTTATTCTGAAAGATaGTTATTTCACCTCCACGTC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGPYSER*LFHLHV
Trigger: GACGTGGAGGTGAAATAAGCATCTTTCAGAATAAGG...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCGTTGGTCCCAGAGGGTaGTGTACGGAGGGGATTGAT +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFVGPRG*CTEGID
Trigger: ATCAATCCCCTCCGTACAGCACCCTCTGGGACCAAC...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCTCAGAATGTAAGCACTaGCACCCTCTGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPSECKH*HPLTDS
Trigger: TGAATCAGTCAGAGGGTGCCAGTGCTTACATTCTGA...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTACAGTCATGCTGTCCTaGGTGAGCACCGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSTVMLS*VSTDSG
Trigger: GCCACTGTCGGTGCTCACCCAGGACAGCATGACTGT...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLISSLL*ANPMRR
Trigger: GCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGAT...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTTCCTGGTTTGCCATCTaGGCCATATGTCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCSWFAI*AICLRT
Trigger: TGTTCTGAGACATATGGCCCAGATGGCAAACCAGGA...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTAATCTCCTGCTCCTTTaGGTTGAGGGTCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCNLLLL*VEGLME
Trigger: CTCCATTAGACCCTCAACCCAAAGGAGCAGGAGATT...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCATGTGTCCCTTTGTATaGGAGGAGACACACCGCAGT +
Preference number: 4 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFMCPFV*EETHRS
Trigger: ACTGCGGTGTGTCTCCTCCCATACAAAGGGACACAT...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCATGAAAGCACGCTTATaGCAGGCTGGGGGCATACCG +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFMKARL*QAGGIP
Trigger: CGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCAT...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCAAGAAAGACAGAGCATaGCAGCATGTTCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFKKDRA*QHVPHG
Trigger: CCCATGGGGAACATGCTGCCATGCTCTGTCTTTCTT...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CAA 72 bp AGCTTTGCTTTCCTGATAGACATTGTACCTAGTTGCTaGCCTCTCCCTTCCTCTTCCCACTTAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SFAFLIDIVPSC*PLPSSSHLESR
Trigger: TCTGCTTTCTAAGTGGGAAGAGGAAGGGAGAGGCAAGCAACTAGGTACAATGTCTATCAGGAAAGCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTAGACCCCAAGCAGGATaGAGGGGAAGAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSRPQAG*RGRVQP
Trigger: TGGCTGAACTCTTCCCCTTCATCCTGCTTGGGGTCT...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATTTAGGAAACACAGCTTaGAACTCATACGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHLGNTA*NSYGVK
Trigger: TTTAACCCCGTATGAGTTTCAAGCTGTGTTTCCTAA...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCATGGAAGTGCTGAGCTaGTCAATATTGAATGCATGG +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPMEVLS*SILNAW
Trigger: CCATGCATTCAATATTGATCAGCTCAGCACTTCCAT...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCAGTAACAGTAAGCACTaGATATTGAATGACTTCGAC +
Preference number: 4 (lower is better)
Translates to: DSCICYLKMKARLWQAGGSNSKH*ILNDFD
Trigger: GTCGAAGTCATTCAATATTCAGTGCTTACTGTTACT...GCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTGCACCTCCCGCCTCTTaGCCTCATTCTTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSAPPAS*PHSCCT
Trigger: AGTACAGCAAGAATGAGGGCAAGAGGCGGGAGGTGC...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGGATTTTGAAGATCAGTaGCAGGGCCAGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLDFEDQ*QGQLPH
Trigger: ATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATC...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTTCTGGCGTTCTTTATTaGGAGAATCAGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLSGVLY*ENQFPP
Trigger: AGGAGGGAACTGATTCTCGCAATAAAGAACGCCAGA...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCATAAGGACGCTGACATaGCGATGCCCCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFIRTLT*RCPFVF
Trigger: AAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTAT...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTCACCGCAGTACTGTATaGTCCAATAGTTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSHRSTV*SNSSSC
Trigger: GCACGATGAACTATTGGAGCATACAGTACTGCGGTG...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACGTTCAAATACAAAGATaGCCAGTGCCCAAATTGGCT +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDVQIQR*PVPKLA
Trigger: AGCCAATTTGGGCACTGGGCATCTTTGTATTTGAAC...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACAACTTCTAGCACATTCTaGCTTTCCCTAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTTSSTF*LSLKAT
Trigger: TGTGGCTTTTAGGGAAAGGCAGAATGTGCTAGAAGT...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATAGCCAGTCGATGGTGTaGAAGTCCTCATACGTCCCC +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHSQSMV*KSSYVP
Trigger: GGGGACGTATGAGGACTTCCACACCATCGACTGGCT...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGTCAGAATGTAAGCACTaGCACCCTCTGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQSECKH*HPLTDS
Trigger: TGAATCAGTCAGAGGGTGCCAGTGCTTACATTCTGA...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTAATGGTCTTTATCTCTaGTATGCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLNGLYL*YARATG
Trigger: GCCTGTGGCTCTGGCATACCAGAGATAAAGACCATT...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCAATGGTCTTTATCTCTaGTATGCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPNGLYL*YARATG
Trigger: GCCTGTGGCTCTGGCATACCAGAGATAAAGACCATT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCATCAGTTCCCTCCTCTaGGCAAATCCAATGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFISSLL*ANPMRR
Trigger: GCGCCTCATTGGATTTGCCCAGAGGAGGGAACTGAT...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLCPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTCGTGAGCGGACCCACTaGCATACTTGCAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSRERTH*HTCSFH
Trigger: GTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACG...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTATGAAAGCACGCTTATaGCAGGCTGGGGGCATACCG +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSMKARL*QAGGIP
Trigger: CGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCAT...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCAGGGTGCCCTTATTTaGTGCTTTTGTACAACACAT +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPQGALI*CFCTTH
Trigger: ATGTGTTGTACAAAAGCACCAAATAAGGGCACCCTG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCCATGATGACCACCAATaGCACCGTCATCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFHDDHQ*HRHPGN
Trigger: GTTACCAGGATGACGGTGTCATTGGTGGTCATCATG...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGAGCTGTCCCCAATGCATaGTCTTTCATTGGGATAATA +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARAVPNA*SFIGII
Trigger: TATTATCCCAATGAAAGATCATGCATTGGGGACAGC...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACATACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTAGCAGACATGATACCTaGCAGTTCAGGAACCATCTT +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLSRHDT*QFRNHL
Trigger: AAGATGGTTCCTGAACTGTCAGGTATCATGTCTGCT...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAACTGAGGTGGCTACTTaGTGTTATTTTGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKTEVAT*CYFGRK
Trigger: CTTCCTTCCAAAATAACATCAAGTAGCCACCTCAGT...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTAGCTCCGACCATTTCTaGCACAGGGGACACTTGTCT +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSSSDHF*HRGHLS
Trigger: AGACAAGTGTCCCCTGTGGCAGAAATGGTCGGAGCT...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTGCCACAGGCATATGGTaGAAATACACGCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSATGIW*KYTHQG
Trigger: TCCCTGGTGCGTGTATTTGCACCATATGCCTGTGGC...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCTGGCGTTCTTTATTaGGAGAATCAGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPSGVLY*ENQFPP
Trigger: AGGAGGGAACTGATTCTCGCAATAAAGAACGCCAGA...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTCTCACAATGCCCTCCTaGCTCTGTCTGGCGTTCTTT +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSLTMPS*LCLAFF
Trigger: AAAGAACGCCAGACAGAGGCAGGAGGGCATTGTGAG...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTGGAATTGCTCACAATaGCCTCCTGCCTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHWNCSQ*PPASVW
Trigger: CCAGACAGAGGCAGGAGGGCATTGTGAGCAATTCCA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGATTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: QEPINKDADMPMPLCLLDLSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAACGCTGACATGCCGATaGCCCTTTGTCTTTTGGACT +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENETLTCR*PFVFWT
Trigger: AGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGT...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCACCCACTGGCATACTTaGAGCTTTCACTGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPTHWHT*SFHCVQ
Trigger: TTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACAACTCTTCCAACTGTTTaGCATGAATTTGCAGGTATC +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTTLPTV*HEFAGI
Trigger: GATACCTGCAAATTCATGGCAAACAGTTGGAAGAGT...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCGGTGCCCTTATTTGGTaGTTTTGTACAACACATTTC +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPGALIW*FCTTHF
Trigger: GAAATGTGTTGTACAAAAGCACCAAATAAGGGCACC...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTACAGGTATCCCAAAATaGAGCCATTCCAGGAATCTG +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSTGIPK*SHSRNL
Trigger: CAGATTCCTGGAATGGCTGCATTTTGGGATACCTGT...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTCAGAATGTAAGCACTaGCACCCTCTGACTGATTCA +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSSECKH*HPLTDS
Trigger: TGAATCAGTCAGAGGGTGCCAGTGCTTACATTCTGA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp ATTTTACTGAACAGGTATCCCAAAATGCAGCCATTCCAGGAATCTGGATACTTACCTCCTGCCTCTGTCTaGCGTTCTTTATTGCGAGAA +
Preference number: 4 (lower is better)
Translates to: ILLNRYPKMQPFQESGYLPPASV*RSLLRE
Trigger: TTCTCGCAATAAAGAACGCCAGACAGAGGCAGGAGG...TAAGTATCCAGATTCCTGGAATGGCTGCATTTTGGGATACCTGTTCAGTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTGCCCCTTTGTCTTTTaGACTCAACACTTCACGTGT +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSCPFVF*TQHFTC
Trigger: ACACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTTCAGAATGTAAGCACTaGCACCATGAAACATCCAGA +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCSECKH*HHETSR
Trigger: TCTGGATGTTTCATGGTGCCAGTGCTTACATTCTGA...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421085.7
CDS-3UTR TCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTCATGTTGGGGTCATTaGTGTAGTCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHSCWGH*CSHRAG
Trigger: CCCAGCTCTGTGACTACATCAATGACCCCAACATGA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTTTAGGAAACACAGCTTaGAACTCATACGGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLLGNTA*NSYGVK
Trigger: TTTAACCCCGTATGAGTTTCAAGCTGTGTTTCCTAA...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTGGAGTAAAAGTTTCTTaGGTCAGCATTCATGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSGVKVS*VSIHAP
Trigger: TGGAGCATGAATGCTGACTCAAGAAACTTTTACTCC...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 4 (lower is better)
Translates to: AYASSSPQPYLIRPERKNKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCAAATCAATGATCGGGTaGGTATACCCTCAAAATAAG +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPKSMIG*VYPQNK
Trigger: CTTATTTTGAGGGTATACTCACCCGATCATTGATTT...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTGTAAGCACTGAATATTaGATGACTTCGACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: INKDADMPMPLCLLDSTLVSTEY*MTSTSS
Trigger: GCTAGAAGTCGAAGTCATTCAATATTCAGTGCTTAC...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATGATTTTGAAGATCAGTaGCAGGGCCAGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHDFEDQ*QGQLPH
Trigger: ATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATC...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTTCTGCTGTCCCCAATaGATGATCTTTCATTGGGAT +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSFCCPQ*MIFHWD
Trigger: ATCCCAATGAAAGATCATGCATTGGGGACAGCAGAA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAATTGAGTCAGCATTCATaGTCCACATACTTGTACAGA +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKLSQHS*STYLYR
Trigger: TCTGTACAAGTATGTGGAGCATGAATGCTGACTCAA...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTCCAATAGTTCATCGTaGAGTCCCAGGATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHSNSSS*SPRMPV
Trigger: GACTGGCATCCTGGGACTGCACGATGAACTATTGGA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACATACAAAGATGCCCAGTaGCCAAATTGGCTATATAAA +
Preference number: 4 (lower is better)
Translates to: PINKDADMPMPLCLLDSTYKDAQ*PNWLYK
Trigger: TTTATATAGCCAATTTGGGCACTGGGCATCTTTGTA...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAGACATTGTACCTAGTTaGTTGCCTCTCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENEDIVPS*LPLPSS
Trigger: AGAGGAAGGGAGAGGCAAGCAACTAGGTACAATGTC...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCAGATTAGAAAGAAATaGTGTGGTTTCACTGACCTT +
Preference number: 4 (lower is better)
Translates to: MPVLHREMISSHSSWQVPQIRKK*CGFTDL
Trigger: AAGGTCAGTGAAACCACAGCATTTCTTTCTAATCTG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTGCAATCGCAGGGGATaGACTAAAAACGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPCNRRG*TKNDLE
Trigger: TTCTAAGTCGTTTTTAGTGCATCCCCTGCGATTGCA...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTATGAAGCAAATGCCATaGGGATGCAAATCAATGATC +
Preference number: 4 (lower is better)
Translates to: AKLQEPINKDADMPMPLCMKQMP*GCKSMI
Trigger: GATCATTGATTTGCATCCCCATGGCATTTGCTTCAT...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATACTTATACATTACAACTaGATGTTTTGCATCCTACAG +
Preference number: 4 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCILIHYN*MFCILQ
Trigger: CTGTAGGATGCAAAACATCCAGTTGTAATGTATAAG...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR TCA 90 bp CTGAAAATAATTGCCACCTTGTTGCTAATTAAACATGATGGATTCGGGGTCCTGATGGAAGTGCTGAGCTaGTCAATATTGAATGCATGG +
Preference number: 4 (lower is better)
Translates to: LKIIATLLLIKHDGFGVLMEVLS*SILNAW
Trigger: CCATGCATTCAATATTGATCAGCTCAGCACTTCCAT...CAGGACCCCGAATCCATCATGTTTAATTAGCAACAAGGTGGCAATTATTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AATCAGAGGTTCAACTTACGAAAGAAAGTAAGATTGGGTTGTTTCAGTCAAGTAGATTTTGAAGATCAGTaGCAGGGCCAGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: NQRFNLRKKVRLGCFSQVDFEDQ*QGQLPH
Trigger: ATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATC...TACTTGACTGAAACAACCCAATCTTACTTTCTTTCGTAAGTTGAACCTCTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTTGTGGGCCTCGTAGATaGCTTCTTTCCCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSCGPRR*LLSQMH
Trigger: ATGCATTTGGGAAAGAAGGCATCTACGAGGCCCACA...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATCTGGCGTTCTTTATTaGGAGAATCAGTTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENESGVLY*ENQFPP
Trigger: AGGAGGGAACTGATTCTCGCAATAAAGAACGCCAGA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCGCCTGTTTGGACTCTTaGATATGCTACTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFACLDS*ICYLKM
Trigger: CATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTGCCTGTTTGGACTCTTaGATATGCTACTTGAAAATG +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLACLDS*ICYLKM
Trigger: CATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCAGTGGATGGAAGTTCTaGATTTGGAGAGAGCAAATA +
Preference number: 4 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFSGWKF*IWREQI
Trigger: TATTTGCTCTCTCCAAATGCAGAACTTCCATCCACT...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTCCTGGTTTGCCATCTaGGCCATATGTCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHSWFAI*AICLRT
Trigger: TGTTCTGAGACATATGGCCCAGATGGCAAACCAGGA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTATGAAGCAAATGCCATaGGGATGCAAATCAATGATC +
Preference number: 4 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSMKQMP*GCKSMI
Trigger: GATCATTGATTTGCATCCCCATGGCATTTGCTTCAT...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CCA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGAAAGAAATTATGGATTTaGGCTGGGAATTCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARKKLWI*AGNSRS
Trigger: TGACCTAGAATTCCCAGCCCAAATCCATAATTTCTT...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTATAAAGCCAGGCTATaGCTAATACTCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFYKARL*LILFPS
Trigger: GCTGGGAAAGAGTATTAGTCATAGCCTGGCTTTATA...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp AATCAGAGGTTCAACTTACGAAAGAAAGTAAGATTGGGTTGTTTCAGTCAAGTACACCGCAGTACTGTATaGTCCAATAGTTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: NQRFNLRKKVRLGCFSQVHRSTV*SNSSSC
Trigger: GCACGATGAACTATTGGAGCATACAGTACTGCGGTG...TACTTGACTGAAACAACCCAATCTTACTTTCTTTCGTAAGTTGAACCTCTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGTTGGACTCTTGCATATaGTACTTGAAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: ACLDSCICYLKMKARLWQLDSCI*YLKMKA
Trigger: TGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAA...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAAAGTCTGATAGAACACTaGCCATACAAAATTAAAGCA +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKSLIEH*PYKIKA
Trigger: TGCTTTAATTTTGTATGGGCAGTGTTCTATCAGACT...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CCA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACTTATACATTACAACTaGATGTTTTGCATCCTACAG +
Preference number: 4 (lower is better)
Translates to: EANAMGMQINDRVSIPSKLIHYN*MFCILQ
Trigger: CTGTAGGATGCAAAACATCCAGTTGTAATGTATAAG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR CCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAACCCTTCAGTGTTTGCTaGGTTTTCTGTTATTTGCAG +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENEPFSVC*VFCYLQ
Trigger: CTGCAAATAACAGAAAACCCAGCAAACACTGAAGGG...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR TCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENEYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTACAAACATCAGCCTTaGGCAGAAGGAGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFYKHQP*AEGVKV
Trigger: AACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTA...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTTGGATATTGTCACACTaGGGTGGCTACTTGATGTTA +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSWILSH*GGYLML
Trigger: TAACATCAAGTAGCCACCTCAGTGTGACAATATCCA...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR GCA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCTTGCATATaGTACTTGAAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KLQEPINKDADMPMPLCLLDSCI*YLKMKA
Trigger: TGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAA...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTTGGACTCTTGCATATaGTACTTGAAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: INEANAMGMQINDRVSIPLDSCI*YLKMKA
Trigger: TGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAA...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTTGTTGGTTCAGAAACTaGTGGATAAGCCAGATAACA +
Preference number: 4 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSCWFRN*WISQIT
Trigger: TGTTATCTGGCTTATCCATCAGTTTCTGAACCAACA...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR TCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTCCTCTGTATTTTACTaGACAGGTATCCCAAAATGC +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHSSVFY*TGIPKC
Trigger: GCATTTTGGGATACCTGTTCAGTAAAATACAGAGGA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR GCA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATTGGACTCTTGCATATaGTACTTGAAAATGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VVTLGSLFGLLHMLLENELDSCI*YLKMKA
Trigger: TGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR GCA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTACTCAAGGCTTACGTaGTATAAATACGACAATGAA +
Preference number: 4 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHYSRLT*YKYDNE
Trigger: TTCATTGTCGTATTTATAGCACGTAAGCCTTGAGTA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
3UTR CAA 72 bp ATAAATCAGAGGTTCAACTTACGAAAGAAAGTAAGATaGGGTTGTTTCAGTCAAGTAACTCTTCCAACTGTT +
Preference number: 4 (lower is better)
Translates to: INQRFNLRKKVR*GCFSQVTLPTV
Trigger: AACAGTTGGAAGAGTTACTTGACTGAAACAACCCAATCTTACTTTCTTTCGTAAGTTGAACCTCTGATTTAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS GCA 90 bp GACGGCTGCGAGCGCCGTGACATCACCAGGAGGCGGGCCCCACGCTaGCACGTGACGCCCTCGGGGCGAGGCAGGGAGGTGTGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: DGCERRDITRRRAPR*HVTPSGRGREVCAG
Trigger: CCCCGCGCACACCTCCCTGCCTCGCCCCGAGGGCGTCACGTGGCAGCGTGGGGCCCGCCTCCTGGTGATGTCACGGCGCTCGCAGCCGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS TCA 90 bp GCATCCTCGAGCATCCTTTCTTCAGCGCGACGGCTGCGAGCGCCGTaGCATCACCAGGAGGCGGGCCCCACGCTGCCACGTGACGCCCTC +
Preference number: 5 (lower is better)
Translates to: ASSSILSSARRLRAP*HHQEAGPTLPRDAL
Trigger: GAGGGCGTCACGTGGCAGCGTGGGGCCCGCCTCCTGGTGATGTCACGGCGCTCGCAGCCGTCGCGCTGAAGAAAGGATGCTCGAGGATGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS TCA 90 bp CACGGGAGTGCCGCATGCCCATCCACGTACCCGCCAGCAGGCCGATaGGCAGCATCACCACCCATCCCGACCAGGCATCCAGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: HGSAACPSTYPPAGR*AASPPIPTRHPAGS
Trigger: AGAGCCTGCTGGATGCCTGGTCGGGATGGGTGGTGATGCTGCTCATCGGCCTGCTGGCGGGTACGTGGATGGGCATGCGGCACTCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CCA 90 bp GCTAATTACACCTGCAGTGCCGCATCGCGCCCGCGGCCGCCCACCTaGACAGCATCCTCGAGCATCCTTTCTTCAGCGCGACGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: ANYTCSAASRPRPPT*TASSSILSSARRLR
Trigger: TCGCAGCCGTCGCGCTGAAGAAAGGATGCTCGAGGATGCTGTCCAGGTGGGCGGCCGCGGGCGCGATGCGGCACTGCAGGTGTAATTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380829.5
ENST00000380833.9
CDS-3UTR CAA 90 bp GTCCTCAAGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTGCATCAGCTACCCACTaGCTGGTCACAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: VLKGQGRLAGFSIKGPPGASATH*LVTAAA
Trigger: GGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATGC...ACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCTTGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS CCA 90 bp CAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTACCTaGCAGCTGATTGTGCCTCAGGAGATAGGAGACCCGCTCCGCGTC +
Preference number: 5 (lower is better)
Translates to: QGRLAGFSIKGPPGT*QLIVPQEIGDPLRV
Trigger: GACGCGGAGCGGGTCTCCTATCTCCTGAGGCACAATCAGCTGCCAGGTACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CAA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCCCCAGCCTGGTGGTCTaGCGCCTCCTGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVPSLVV*RLLHQA
Trigger: CGCCTGGTGCAGGAGGCGCAAGACCACCAGGCTGGG...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CCGAGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTCTCATCGCTCCCGCATaGACCATGCTAATTACACCT +
Preference number: 5 (lower is better)
Translates to: PRQAAAPTIAYSPGVTQSLIAPA*TMLITP
Trigger: AGGTGTAATTAGCATGGTCAATGCGGGAGCGATGAG...AGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp GGGTCTGCACCAGTTCCTGAAGATGATCCAGTCATGGTGATGGTAGGCCAGCTGGCATCAGCTACCCACTaGCTGGTCACAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GSAPVPEDDPVMVMVGQLASATH*LVTAAA
Trigger: GGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATGC...CAGCTGGCCTACCATCACCATGACTGGATCATCTTCAGGAACTGGTGCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp GAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCCTGCACCAGGCGATGTaGCAGCGGATGAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: ESTLMAGWGHTGYGPWKCLHQAM*QRMKRV
Trigger: AACCCTCTTCATCCGCTGCAACATCGCCTGGTGCAG...GCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS TCA 90 bp AGACCCCCTCCTTCAGGTCCGTCATCCAGTCCACGGCGAGATCGATaGCCCCAGCCAAGGTGCCTACTACACGGCAGTTACTCATCCATG +
Preference number: 5 (lower is better)
Translates to: RPPPSGPSSSPRRDR*PQPRCLLHGSYSSM
Trigger: CATGGATGAGTAACTGCCGTGTAGTAGGCACCTTGGCTGGGGTCATCGATCTCGCCGTGGACTGGATGACGGACCTGAAGGAGGGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGGCATCAGCTACCCACTaGCTGGTCACAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRASATH*LVTAAA
Trigger: GGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATGC...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS TCA 90 bp AAGCGACACGCGCTATATTCCAAATCTCCCAGAGGGTTCGTGTTTTaGGGTTTCGGCCTCTGCAGCTTCCCACGGGAGTGCCGCATGCCC +
Preference number: 5 (lower is better)
Translates to: KRHALYSKSPRGFVF*GFGLCSFPRECRMP
Trigger: GGGCATGCGGCACTCCCGTGGGAAGCTGCAGAGGCCGAAACCTCAAAACACGAACCCTCTGGGAGATTTGGAATATAGCGCGTGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CCA 90 bp TGTCTGTCGGTGTCCCGTGACTTTTCCCTTAGCCAGTCGATGGTGTaGAAGTCCTCATACGTCCCCACATCAGGGAACGGCTCATCGAGG +
Preference number: 5 (lower is better)
Translates to: CLSVSRDFSLSQSMV*KSSYVPTSGNGSSR
Trigger: CCTCGATGAGCCGTTCCCTGATGTGGGGACGTATGAGGACTTCCACACCATCGACTGGCTAAGGGAAAAGTCACGGGACACCGACAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTCCCATATGGACTCCTaGCTCTTGCTGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLSHMDS*LLLVIF
Trigger: GAAGATCACCAGCAAGAGCAAGGAGTCCATATGGGA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp TACAGCCCTGGCGTGACACAGTCTGCACCGGGTCTGCACCAGTTCCTGAAGATGACCAGCGTGACTGTCTaGATTAGCAGGGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: YSPGVTQSAPGLHQFLKMTSVTV*ISRVHF
Trigger: GAAGTGGACCCTGCTAATCAAGACAGTCACGCTGGT...CATCTTCAGGAACTGGTGCAGACCCGGTGCAGACTGTGTCACGCCAGGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATCCCAGCCTGGTGGTCTaGCGCCTCCTGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: AYASSSPQPYLIRPERKNPSLVV*RLLHQA
Trigger: CGCCTGGTGCAGGAGGCGCAAGACCACCAGGCTGGG...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCACCAGGCGATGTTGCAGCGGATGAAGAGGGTTCCCCACAAGCCCCCGAAGACATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 5 (lower is better)
Translates to: APGDVAADEEGSPQAPEDMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...GTCTTCGGGGGCTTGTGGGGAACCCTCTTCATCCGCTGCAACATCGCCTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTTCCCCCTCGGTGACCTaGGCCCGGAAGCATAATTTC +
Preference number: 5 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGSPSVT*ARKHNF
Trigger: GAAATTATGCTTCCGGGCCAAGGTCACCGAGGGGGA...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGAGAGCAAATACCCTaGGGATCCCTACCCAACTAC +
Preference number: 5 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLREQIP*GSLPNY
Trigger: GTAGTTGGGTAGGGATCCCAAGGGTATTTGCTCTCT...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATGCATCAGCTACCCACTaGCTGGTCACAGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHASATH*LVTAAA
Trigger: GGCGGCGGCTGTGACCAGCAAGTGGGTAGCTGATGC...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACCTCAGGCGTTTCGCTaGATGTGTGCAGCTTGCCTG +
Preference number: 5 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKPQAFR*MCAACL
Trigger: CAGGCAAGCTGCACACATCAAGCGAAACGCCTGAGG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGCCCAGCCTGGTGGTCTaGCGCCTCCTGCACCAGGCG +
Preference number: 5 (lower is better)
Translates to: ACLDSCICYLKMKARLWQPSLVV*RLLHQA
Trigger: CGCCTGGTGCAGGAGGCGCAAGACCACCAGGCTGGG...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CCGAGGCAGGCCGCAGCTCCCACCATTGCGTACAGCCCTGGCGTGACACAGTCTTCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 5 (lower is better)
Translates to: PRQAAAPTIAYSPGVTQSSCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...AGACTGTGTCACGCCAGGGCTGTACGCAATGGTGGGAGCTGCGGCCTGCCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp CTCAGACCGGAGGACACTACCAGCACCAGCGTGACTGTCTTGATTAGCAGGGTCCATGCCGATGCCCCTTaGTCTTTTGGACTCAACACT +
Preference number: 5 (lower is better)
Translates to: LRPEDTTSTSVTVLISRVHADAP*SFGLNT
Trigger: AGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATG...GACCCTGCTAATCAAGACAGTCACGCTGGTGCTGGTAGTGTCCTCCGGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp GACGATTTTGAAGATCAGTGCCAGGGCCAGCTGCCACATGGCCGTGTAAACACCTCCCATATGGACTCCTaGCTCTTGCTGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: DDFEDQCQGQLPHGRVNTSHMDS*LLLVIF
Trigger: GAAGATCACCAGCAAGAGCAAGGAGTCCATATGGGA...GGTGTTTACACGGCCATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCAATGGTAACGACGATTTaGAAGATCAGTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LENESTLMAGWGHTGYGPMVTTI*KISARA
Trigger: GGCCCTGGCACTGATCTTCAAAATCGTCGTTACCAT...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AGGGTCAGGGTCGGCTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTACCTGGCTCTTGCATATGCTACTaGAAAATGAAAGCACGCTTA +
Preference number: 5 (lower is better)
Translates to: RVRVGWQGSPSKVLPVPGSCICY*KMKARL
Trigger: TAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGA...GCCAGGTACCGGGAGGACCTTTGATGGAGAACCCTGCCAGCCGACCCTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CAA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGGTAACGACGATTTaGAAGATCAGTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRMVTTI*KISARA
Trigger: GGCCCTGGCACTGATCTTCAAAATCGTCGTTACCAT...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCATGGAAGTGCTGTTACAAACATCAGCCTaGAGCAGAAGGAGTAAAAGT +
Preference number: 5 (lower is better)
Translates to: KHAYGRLGAYRLWPMEVLLQTSA*SRRSKS
Trigger: ACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAA...CAGCACTTCCATGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCCATGCCGATGCCCCTTaGTCTTTTGGACTCAACACT +
Preference number: 5 (lower is better)
Translates to: HRSTVCSNSSSCSPRMPVHADAP*SFGLNT
Trigger: AGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATG...GACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CTTGAAAATGAAAGCACGCTTATGGCAGGCTGGGGGCATACCGGCTATGGCCCACATTGGGTAGCCTGTTaGGACTCTTGCATATGCTAC +
Preference number: 5 (lower is better)
Translates to: LENESTLMAGWGHTGYGPHWVAC*DSCICY
Trigger: GTAGCATATGCAAGAGTCCAAACAGGCTACCCAATG...TGGGCCATAGCCGGTATGCCCCCAGCCTGCCATAAGCGTGCTTTCATTTTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTCCCAGGCCCCTGCCTTaGTGTAACTGTACCCGCCAG +
Preference number: 5 (lower is better)
Translates to: INKDADMPMPLCLLDSTLPRPLP*CNCTRQ
Trigger: CTGGCGGGTACAGTTACACAAAGGCAGGGGCCTGGG...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACTCTTGCCCTCATTCTaGCTGTACTTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKLLPSF*LYLEKR
Trigger: CCTTTTCTCCAAGTACAGCAAGAATGAGGGCAAGAG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAACATTGGGTAGCCTGTTaGGACTCTTGCATATGCTAC +
Preference number: 5 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKHWVAC*DSCICY
Trigger: GTAGCATATGCAAGAGTCCAAACAGGCTACCCAATG...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTGGACCACATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTTCTCTTGCAATCCATTaGGAGGGATTCCAACTGACA +
Preference number: 5 (lower is better)
Translates to: VDHMAELGLHGRKAVCCGSLAIH*EGFQLT
Trigger: TGTCAGTTGGAATCCCTCCAAATGGATTGCAAGAGA...ACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCATGTGGTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS GCA 90 bp GTGGAAAGGCTACCAGCTCTATCGTCACAGCTCTTCAGAAGCCTGTaGCTGAGCTCATGCCTTGGGCATGCCTTATTGATGATGGATTTT +
Preference number: 5 (lower is better)
Translates to: VERLPALSSQLFRSL*LSSCLGHALLMMDF
Trigger: AAAATCCATCATCAATAAGGCATGCCCAAGGCATGAGCTCAGGCACAGGCTTCTGAAGAGCTGTGACGATAGAGCTGGTAGCCTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAACCAGCGTGACTGTCTaGATTAGCAGGGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCITSVTV*ISRVHF
Trigger: GAAGTGGACCCTGCTAATCAAGACAGTCACGCTGGT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATACCAGCGTGACTGTCTaGATTAGCAGGGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHTSVTV*ISRVHF
Trigger: GAAGTGGACCCTGCTAATCAAGACAGTCACGCTGGT...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACTTCTGCACCAGGCGATGTaGCAGCGGATGAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: INKDADMPMPLCLLDSTLLHQAM*QRMKRV
Trigger: AACCCTCTTCATCCGCTGCAACATCGCCTGGTGCAG...AAGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp TATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: YGRRHTAVLYAPIVHRAVDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...GACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AACAGGAGCAAGAAACAGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCAGCCTGTTTGGACTCTaGCATATGCTACTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: NRSKKQDGRERTHWHTCSSLFGL*HMLLEN
Trigger: ATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCT...GCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCTGTTTCTTGCTCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAATCTCTTGCAATCCATTaGGAGGGATTCCAACTGACA +
Preference number: 5 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKSLAIH*EGFQLT
Trigger: TGTCAGTTGGAATCCCTCCAAATGGATTGCAAGAGA...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR CAA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCTGTACGGAGGGGATaGATGTCCTCAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ACLDSCICYLKMKARLWQAVRRG*MSSRVR
Trigger: CCTGACCCTTGAGGACATCAATCCCCTCCGTACAGC...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CAA 90 bp GTCCCTTTGTATGGGAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATTCCCATATGGACTCCTaGCTCTTGCTGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: VPLYGRRHTAVLYAPIVHSHMDS*LLLVIF
Trigger: GAAGATCACCAGCAAGAGCAAGGAGTCCATATGGGA...ATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTCCCATACAAAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTCTGCACCAGGCGATGTaGCAGCGGATGAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: KLQEPINKDADMPMPLCLLHQAM*QRMKRV
Trigger: AACCCTCTTCATCCGCTGCAACATCGCCTGGTGCAG...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: NAYASSSPQPYLIRPERKDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAATTGTACCTAGTTGCTaGCCTCTCCCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIIVPSC*PLPSSS
Trigger: GGAAGAGGAAGGGAGAGGCAAGCAACTAGGTACAAT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp AGGACGGTCGTGAGCGGACCCACTGGCATACTTGCAGCTTTCACTGTGTTCAAAGTTTCATGTTCCCTTTaGAAGCCACTTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: RTVVSGPTGILAAFTVFKVSCSL*KPLVSA
Trigger: AGCTGAAACAAGTGGCTTCAAAAGGGAACATGAAAC...TTTGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTCCGCTCACGACCGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp ATGGCTGAGTTAGGACTCCACGGAAGGAAGGCAGTTTGCTGTGGTAGTCCCCACCCTTATTTGGTGCTTTaGTACAACACATTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: MAELGLHGRKAVCCGSPHPYLVL*YNTFPQ
Trigger: CTGAGGAAATGTGTTGTACAAAAGCACCAAATAAGG...GTGGGGACTACCACAGCAAACTGCCTTCCTTCCGTGGAGTCCTAACTCAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACCTCATCGCTCCCGCATaGACCATGCTAATTACACCT +
Preference number: 5 (lower is better)
Translates to: QEPINKDADMPMPLCLLDLIAPA*TMLITP
Trigger: AGGTGTAATTAGCATGGTCAATGCGGGAGCGATGAG...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACATGGACTCCTTGCTCTaGCTGGTGATCTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: QEPINKDADMPMPLCLLDMDSLL*LVIFLC
Trigger: ACACAGGAAGATCACCAGCAAGAGCAAGGAGTCCAT...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGCATCCAGCAGGCTCTaGATGAACTCCCATATGGAC +
Preference number: 5 (lower is better)
Translates to: ACLDSCICYLKMKARLWQASSRL*MNSHMD
Trigger: GTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGC...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTGCATCCAGCAGGCTCTaGATGAACTCCCATATGGAC +
Preference number: 5 (lower is better)
Translates to: AKLQEPINKDADMPMPLCASSRL*MNSHMD
Trigger: GTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGC...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACATGGTAACGACGATTTaGAAGATCAGTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QEPINKDADMPMPLCLLDMVTTI*KISARA
Trigger: GGCCCTGGCACTGATCTTCAAAATCGTCGTTACCAT...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATGTCTGGCGTTCTTTATaGCGAGAATCAGTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: AYASSSPQPYLIRPERKNVWRSL*RESVPS
Trigger: GGAGGGAACTGATTCTCGCAATAAAGAACGCCAGAC...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTCTTGATGTGTGCAGCTaGCCTGGCCTTCCGCTTTCA +
Preference number: 5 (lower is better)
Translates to: KLQEPINKDADMPMPLCLLDVCS*PGLPLS
Trigger: TGAAAGCGGAAGGCCAGGCAAGCTGCACACATCAAG...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GAGGAGACACACCGCAGTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGTTACAAACATCAGCCTaGAGCAGAAGGAGTAAAAGT +
Preference number: 5 (lower is better)
Translates to: EETHRSTVCSNSSSCSPRLQTSA*SRRSKS
Trigger: ACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAA...CCTGGGACTGCACGATGAACTATTGGAGCATACAGTACTGCGGTGTGTCTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 5 (lower is better)
Translates to: NAYASSSPQPYLIRPERKMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATAATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 5 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCIMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCATGCCGATGCCCCTTaGTCTTTTGGACTCAACACT +
Preference number: 5 (lower is better)
Translates to: MPVLHREMISSHSSWQVPHADAP*SFGLNT
Trigger: AGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATGACCCACTGGCATACTaGCAGCTTTCACTGTGTTCA +
Preference number: 5 (lower is better)
Translates to: AYASSSPQPYLIRPERKNDPLAY*QLSLCS
Trigger: TGAACACAGTGAAAGCTGCAAGTATGCCAGTGGGTC...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GACGATTTTGAAGATCAGTGCCAGGGCCAGCTGCCACATGGCCGTGTAAACACCTCTTGCATATGCTACTaGAAAATGAAAGCACGCTTA +
Preference number: 5 (lower is better)
Translates to: DDFEDQCQGQLPHGRVNTSCICY*KMKARL
Trigger: TAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGA...GGTGTTTACACGGCCATGTGGCAGCTGGCCCTGGCACTGATCTTCAAAATCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS-3UTR CAA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCGCAGACTCCTCATCCTaGACCTTAGTCCACCTGTCC +
Preference number: 5 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFADSSS*TLVHLS
Trigger: GGACAGGTGGACTAAGGTCAAGGATGAGGAGTCTGC...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGCTCATCGCTCCCGCATaGACCATGCTAATTACACCT +
Preference number: 5 (lower is better)
Translates to: ACLDSCICYLKMKARLWQLIAPA*TMLITP
Trigger: AGGTGTAATTAGCATGGTCAATGCGGGAGCGATGAG...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGATCCCATATGGACTCCTaGCTCTTGCTGGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARSHMDS*LLLVIF
Trigger: GAAGATCACCAGCAAGAGCAAGGAGTCCATATGGGA...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCGCATCCAGCAGGCTCTaGATGAACTCCCATATGGAC +
Preference number: 5 (lower is better)
Translates to: INEANAMGMQINDRVSIPASSRL*MNSHMD
Trigger: GTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGC...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCACCAGCGTGACTGTCTaGATTAGCAGGGTCCACTTC +
Preference number: 5 (lower is better)
Translates to: INEANAMGMQINDRVSIPTSVTV*ISRVHF
Trigger: GAAGTGGACCCTGCTAATCAAGACAGTCACGCTGGT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGGTCTGGCGTTCTTTATaGCGAGAATCAGTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ACLDSCICYLKMKARLWQVWRSL*RESVPS
Trigger: GGAGGGAACTGATTCTCGCAATAAAGAACGCCAGAC...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAACTGCACCAGGCGATGTaGCAGCGGATGAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VVTLGSLFGLLHMLLENELHQAM*QRMKRV
Trigger: AACCCTCTTCATCCGCTGCAACATCGCCTGGTGCAG...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GGGGGCATACCGGCTATGGCCCATGGAAGTGCTGAGCTGATCAATATTGAATGCTCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 5 (lower is better)
Translates to: GGIPAMAHGSAELINIECSCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...GCATTCAATATTGATCAGCTCAGCACTTCCATGGGCCATAGCCGGTATGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACTCAACACATTGGGTAGCCTGTTaGGACTCTTGCATATGCTAC +
Preference number: 5 (lower is better)
Translates to: PINKDADMPMPLCLLDSTHWVAC*DSCICY
Trigger: GTAGCATATGCAAGAGTCCAAACAGGCTACCCAATG...TGTTGAGTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATTTTACTGAACAGGTATCCCAAAATGCAGCCATTCCAGGAATCTGGATACTTATACTCCCCACTGTCGTaGGTCCCAGAGGGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: ILLNRYPKMQPFQESGYLYSPLS*VPEGAV
Trigger: TACAGCACCCTCTGGGACCAACGACAGTGGGGAGTA...TAAGTATCCAGATTCCTGGAATGGCTGCATTTTGGGATACCTGTTCAGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS-3UTR CAA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCATGGACTCCTTGCTCTaGCTGGTGATCTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFMDSLL*LVIFLC
Trigger: ACACAGGAAGATCACCAGCAAGAGCAAGGAGTCCAT...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GGTCGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCACTCTTGCCCTCATTCTaGCTGTACTTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GRSNTKCEYISSKSHVGSLLPSF*LYLEKR
Trigger: CCTTTTCTCCAAGTACAGCAAGAATGAGGGCAAGAG...TGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTCAAAACTCTTGCCCTCATTCTaGCTGTACTTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: EANAMGMQINDRVSIPSKLLPSF*LYLEKR
Trigger: CCTTTTCTCCAAGTACAGCAAGAATGAGGGCAAGAG...TTTTGAGGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTCTTGCCCTCATTCTaGCTGTACTTGGAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: AKLQEPINKDADMPMPLCLLPSF*LYLEKR
Trigger: CCTTTTCTCCAAGTACAGCAAGAATGAGGGCAAGAG...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATGCCAGTCTTGCATAGAGAAATGATTTCTTCACACTCATCATGGCAGGTGCCCCTATTCCCAAAGGGATaGATGGATCTCAGCGTAAAG +
Preference number: 5 (lower is better)
Translates to: MPVLHREMISSHSSWQVPLFPKG*MDLSVK
Trigger: CTTTACGCTGAGATCCATCAATCCCTTTGGGAATAG...GGGCACCTGCCATGATGAGTGTGAAGAAATCATTTCTCTATGCAAGACTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCATGGTAACGACGATTTaGAAGATCAGTGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: INEANAMGMQINDRVSIPMVTTI*KISARA
Trigger: GGCCCTGGCACTGATCTTCAAAATCGTCGTTACCAT...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTGTCTGGCGTTCTTTATaGCGAGAATCAGTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: KLQEPINKDADMPMPLCLVWRSL*RESVPS
Trigger: GGAGGGAACTGATTCTCGCAATAAAGAACGCCAGAC...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp TTGGTTCAGAAACTGATGGATAAGCCAGATAACAGGCTGAGAACAGGAGCAAGAATGCCCCTTTGTCTTTaGGACTCAACACTTCACGTG +
Preference number: 5 (lower is better)
Translates to: LVQKLMDKPDNRLRTGARMPLCL*DSTLHV
Trigger: CACGTGAAGTGTTGAGTCCAAAAGACAAAGGGGCAT...TCTTGCTCCTGTTCTCAGCCTGTTATCTGGCTTATCCATCAGTTTCTGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTCATGCCGATGCCCCTTaGTCTTTTGGACTCAACACT +
Preference number: 5 (lower is better)
Translates to: KLQEPINKDADMPMPLCLHADAP*SFGLNT
Trigger: AGTGTTGAGTCCAAAAGACAAAGGGGCATCGGCATG...AAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCCATTGGGTAGCCTGTTaGGACTCTTGCATATGCTAC +
Preference number: 5 (lower is better)
Translates to: INEANAMGMQINDRVSIPHWVAC*DSCICY
Trigger: GTAGCATATGCAAGAGTCCAAACAGGCTACCCAATG...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS CCA 90 bp GATTCTGAGATAAAGTTAAAACGCTACCGAAATCTCCTGCTCCTTTaGGTTGAGGGTCTAATGGAGGCAGAAACTGACAAGCTCATTTTC +
Preference number: 5 (lower is better)
Translates to: DSEIKLKRYRNLLLL*VEGLMEAETDKLIF
Trigger: GAAAATGAGCTTGTCAGTTTCTGCCTCCATTAGACCCTCAACCCAAAGGAGCAGGAGATTTCGGTAGCGTTTTAACTTTATCTCAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTGAGTGCATCCAGCAGGCTCTaGATGAACTCCCATATGGAC +
Preference number: 5 (lower is better)
Translates to: VHKLQTSALSRRSKSFLSASSRL*MNSHMD
Trigger: GTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGC...ACTCAAGAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GTACTGTATGCTCCAATAGTTCATCGTGCAGTCCCAGGATGCCAGTCTTGCATATCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 5 (lower is better)
Translates to: VLYAPIVHRAVPGCQSCISCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...TATGCAAGACTGGCATCCTGGGACTGCACGATGAACTATTGGAGCATACAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAAAATAGCCTGTTTGGACTCTaGCATATGCTACTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: AYASSSPQPYLIRPERKNSLFGL*HMLLEN
Trigger: ATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCT...ATTTTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp CAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTCTTTTGGACAGCCTGTTTGGACTCTaGCATATGCTACTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: QEPINKDADMPMPLCLLDSLFGL*HMLLEN
Trigger: ATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCT...GTCCAAAAGACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AACGCATATGCCTCATCCTCTCCACAGCCGTATCTGATAAGACCTGAGAGGAAATTACAACTGGATGTTTaGCATCCTACAGAGAAGATA +
Preference number: 5 (lower is better)
Translates to: NAYASSSPQPYLIRPERKLQLDV*HPTEKI
Trigger: TATCTTCTCTGTAGGATGCAAAACATCCAGTTGTAA...TTTCCTCTCAGGTCTTATCAGATACGGCTGTGGAGAGGATGAGGCATATGCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR CAA 90 bp CAACACTTCACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTTGGGTTTTCTGTTATTaGCAGCCGAATGCACACCTA +
Preference number: 5 (lower is better)
Translates to: QHFTCVHKLQTSALSRRSWVFCY*QPNAHL
Trigger: TAGGTGTGCATTCGGCTGCAAATAACAGAAAACCCA...ACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGTGAAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCCTATTCCCAAAGGGATaGATGGATCTCAGCGTAAAG +
Preference number: 5 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFLFPKG*MDLSVK
Trigger: CTTTACGCTGAGATCCATCAATCCCTTTGGGAATAG...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAAAGCACGCTTATGGCAGTCATGCTCCACATACTaGTACAGATCACATCATTTA +
Preference number: 5 (lower is better)
Translates to: ACLDSCICYLKMKARLWQSCSTY*YRSHHL
Trigger: TAAATGATGTGATCTGTACAAGTATGTGGAGCATGA...CTGCCATAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCTTACAAACATCAGCCTaGAGCAGAAGGAGTAAAAGT +
Preference number: 5 (lower is better)
Translates to: INEANAMGMQINDRVSIPLQTSA*SRRSKS
Trigger: ACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAA...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp GCAAAACTTCAAGAACCAATAAATAAGGACGCTGACATGCCGATGCCCCTTTGTTCTTGCATATGCTACTaGAAAATGAAAGCACGCTTA +
Preference number: 5 (lower is better)
Translates to: AKLQEPINKDADMPMPLCSCICY*KMKARL
Trigger: TAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGA...ACAAAGGGGCATCGGCATGTCAGCGTCCTTATTTATTGGTTCTTGAAGTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp AAAAGTTTCTTGAGTCAGCATTCATGCTCCACATACTTGTACAGATCACATCATTCTCTTGCAATCCATTaGGAGGGATTCCAACTGACA +
Preference number: 5 (lower is better)
Translates to: KSFLSQHSCSTYLYRSHHSLAIH*EGFQLT
Trigger: TGTCAGTTGGAATCCCTCCAAATGGATTGCAAGAGA...ATGATGTGATCTGTACAAGTATGTGGAGCATGAATGCTGACTCAAGAAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS-3UTR CAA 90 bp CGTTCCAACACCAAATGTGAATATATCTCATCAAAGTCGCACGTAGGCTCATTCTTACAACTGGATGTTTaGCATCCTACAGAGAAGATA +
Preference number: 5 (lower is better)
Translates to: RSNTKCEYISSKSHVGSFLQLDV*HPTEKI
Trigger: TATCTTCTCTGTAGGATGCAAAACATCCAGTTGTAA...GAATGAGCCTACGTGCGACTTTGATGAGATATATTCACATTTGGTGTTGGAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp ATAAATGAAGCAAATGCCATGGGGATGCAAATCAATGATCGGGTGAGTATACCCCGAAAGAAAGTAAGATaGGGTTGTTTCAGTCAAGTA +
Preference number: 5 (lower is better)
Translates to: INEANAMGMQINDRVSIPRKKVR*GCFSQV
Trigger: TACTTGACTGAAACAACCCAATCTTACTTTCTTTCG...GGGTATACTCACCCGATCATTGATTTGCATCCCCATGGCATTTGCTTCATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS-3UTR CAA 90 bp GTAGTAACATTGGGTAGCCTGTTTGGACTCTTGCATATGCTACTTGAAAATGAATCTTGCATATGCTACTaGAAAATGAAAGCACGCTTA +
Preference number: 5 (lower is better)
Translates to: VVTLGSLFGLLHMLLENESCICY*KMKARL
Trigger: TAAGCGTGCTTTCATTTTCAAGTAGCATATGCAAGA...TTCATTTTCAAGTAGCATATGCAAGAGTCCAAACAGGCTACCCAATGTTACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675144.1
ENST00000675769.1
CDS-3UTR CAA 90 bp ACGTGTGTTCATAAGTTACAAACATCAGCCTTGAGCAGAAGGAGTAAAAGTTTCTTACAACTGGATGTTTaGCATCCTACAGAGAAGATA +
Preference number: 5 (lower is better)
Translates to: TCVHKLQTSALSRRSKSFLQLDV*HPTEKI
Trigger: TATCTTCTCTGTAGGATGCAAAACATCCAGTTGTAA...GAAACTTTTACTCCTTCTGCTCAAGGCTGATGTTTGTAACTTATGAACACACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS CCA 72 bp GGGAAGACCCTGGAAGTCCCGGGAGGTGAGGGTCGATaGCCAGAAACCCTCGCGCTGGCCGCCCCTCAGGCG +
Preference number: 6 (lower is better)
Translates to: GKTLEVPGGEGR*PETLALAAPQA
Trigger: CGCCTGAGGGGCGGCCAGCGCGAGGGTTTCTGGCCATCGACCCTCACCTCCCGGGACTTCCAGGGTCTTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS CCA 72 bp ACCTGCAGTGCCGCATCGCGCCCGCGGCCGCCCACCTaGACAGCATCCTCGAGCATCCTTTCTTCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: TCSAASRPRPPT*TASSSILSSAR
Trigger: TCGCGCTGAAGAAAGGATGCTCGAGGATGCTGTCCAGGTGGGCGGCCGCGGGCGCGATGCGGCACTGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000675769.1
CDS TCA 72 bp GCCGCATGCCCATCCACGTACCCGCCAGCAGGCCGATaGGCAGCATCACCACCCATCCCGACCAGGCATCCA +
Preference number: 6 (lower is better)
Translates to: AACPSTYPPAGR*AASPPIPTRHP
Trigger: TGGATGCCTGGTCGGGATGGGTGGTGATGCTGCTCATCGGCCTGCTGGCGGGTACGTGGATGGGCATGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS GCA 72 bp CAGCATCCTCGAGCATCCTTTCTTCAGCGCGACGGCTaGGAGCGCCGTGACATCACCAGGAGGCGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: QHPRASFLQRDG*ERRDITRRRAP
Trigger: TGGGGCCCGCCTCCTGGTGATGTCACGGCGCTCGCAGCCGTCGCGCTGAAGAAAGGATGCTCGAGGATGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS TCA 72 bp CCTTCAGGTCCGTCATCCAGTCCACGGCGAGATCGATaGCCCCAGCCAAGGTGCCTGCAGTGCCGCATCGCG +
Preference number: 6 (lower is better)
Translates to: PSGPSSSPRRDR*PQPRCLQCRIA
Trigger: CGCGATGCGGCACTGCAGGCACCTTGGCTGGGGTCATCGATCTCGCCGTGGACTGGATGACGGACCTGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674669.1
CDS CAA 72 bp GAAACCCTCGCGCTGGCCGCCCCTCAGGCGTTTCGCTaGATGTGTGCAGCTTGCCTGGCCTTCCGCTTTCAG +
Preference number: 6 (lower is better)
Translates to: ETLALAAPQAFR*MCAACLAFRFQ
Trigger: CTGAAAGCGGAAGGCCAGGCAAGCTGCACACATCAAGCGAAACGCCTGAGGGGCGGCCAGCGCGAGGGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS GCA 72 bp CGCGCTGGCCGCCCCTCAGGCGTTTCGCTTGATGTGTaGAGCTTGCCTGGCCTTCCGCTTTCAGATTCTGAG +
Preference number: 6 (lower is better)
Translates to: RAGRPSGVSLDV*SLPGLPLSDSE
Trigger: CTCAGAATCTGAAAGCGGAAGGCCAGGCAAGCTGCACACATCAAGCGAAACGCCTGAGGGGCGGCCAGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS CAA 90 bp CGATGGCCAGAAACCCTCGCGCTGGCCGCCCCTCAGGCGTTTCGCTaGATGTGTGCAGCTTGCCTGGCCTTCCGCTTTCAGATTCTGAGA +
Preference number: 6 (lower is better)
Translates to: RWPETLALAAPQAFR*MCAACLAFRFQILR
Trigger: TCTCAGAATCTGAAAGCGGAAGGCCAGGCAAGCTGCACACATCAAGCGAAACGCCTGAGGGGCGGCCAGCGCGAGGGTTTCTGGCCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9
CDS CCA 72 bp CTGGCAGGGTTCTCCATCAAAGGTCCTCCCGGTACCTaGCAGCTGATTGTGCCTCAGGAGATAGGAGACCCG +
Preference number: 6 (lower is better)
Translates to: LAGFSIKGPPGT*QLIVPQEIGDP
Trigger: CGGGTCTCCTATCTCCTGAGGCACAATCAGCTGCCAGGTACCGGGAGGACCTTTGATGGAGAACCCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675769.1
CDS CAA 90 bp CAAGCGACACGCGCTATATTCCAAATCTCCCAGAGGGTTCGTGTTTaGAGGTTTCGGCCTCTGCAGCTTCCCACGGGAGTGCCGCATGCC +
Preference number: 6 (lower is better)
Translates to: QATRAIFQISQRVRV*RFRPLQLPTGVPHA
Trigger: GGCATGCGGCACTCCCGTGGGAAGCTGCAGAGGCCGAAACCTCAAAACACGAACCCTCTGGGAGATTTGGAATATAGCGCGTGTCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS GCA 72 bp GGGAATACAGCAGTGCAAAGAGTAGACCCAGGCCCCTaGCTTTGTGTAACTGTACCCGCCAGCAGGCCGATG +
Preference number: 6 (lower is better)
Translates to: GNTAVQRVDPGP*LCVTVPASRPM
Trigger: CATCGGCCTGCTGGCGGGTACAGTTACACAAAGGCAGGGGCCTGGGTCTACTCTTTGCACTGCTGTATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS CAA 72 bp TACAGCAGTGCAAAGAGTAGACCCAGGCCCCTGCCTTaGTGTAACTGTACCCGCCAGCAGGCCGATGAGCAG +
Preference number: 6 (lower is better)
Translates to: YSSAKSRPRPLP*CNCTRQQADEQ
Trigger: CTGCTCATCGGCCTGCTGGCGGGTACAGTTACACAAAGGCAGGGGCCTGGGTCTACTCTTTGCACTGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675144.1
CDS CCA 72 bp GTGTCCCGTGACTTTTCCCTTAGCCAGTCGATGGTGTaGAAGTCCTCATACGTCCCCACATCAGGGAACGGC +
Preference number: 6 (lower is better)
Translates to: VSRDFSLSQSMV*KSSYVPTSGNG
Trigger: GCCGTTCCCTGATGTGGGGACGTATGAGGACTTCCACACCATCGACTGGCTAAGGGAAAAGTCACGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000675144.1
ENST00000675769.1
CDS TCA 72 bp GCGCTATATTCCAAATCTCCCAGAGGGTTCGTGTTTTaGGGTTTCGGCCTCTGCAGCTTCCCACGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: ALYSKSPRGFVF*GFGLCSFPREC
Trigger: GCACTCCCGTGGGAAGCTGCAGAGGCCGAAACCTCAAAACACGAACCCTCTGGGAGATTTGGAATATAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CCA 72 bp TGTCGGTGTCCCGTGACTTTTCCCTTAGCCAGTCGATaGTGTGGAAGTCCTCATACGTCCCCACATCAGGGA +
Preference number: 6 (lower is better)
Translates to: CRCPVTFPLASR*CGSPHTSPHQG
Trigger: TCCCTGATGTGGGGACGTATGAGGACTTCCACACCATCGACTGGCTAAGGGAAAAGTCACGGGACACCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000675144.1
ENST00000675769.1
CDS CAA 72 bp TCCATCAGGTTTCCAGAGCCACTCATCGCTCCCGCATaGACCATGCTAATTACACCTGCAGTGCCGCATCGC +
Preference number: 6 (lower is better)
Translates to: SIRFPEPLIAPA*TMLITPAVPHR
Trigger: GCGATGCGGCACTGCAGGTGTAATTAGCATGGTCAATGCGGGAGCGATGAGTGGCTCTGGAAACCTGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000675144.1
ENST00000675769.1
CDS CAA 72 bp ATCACCACCCATCCCGACCAGGCATCCAGCAGGCTCTaGATGAACTCCCATATGGACTCCTTGCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: ITTHPDQASSRL*MNSHMDSLLLL
Trigger: CAGCAAGAGCAAGGAGTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGCCTGGTCGGGATGGGTGGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000674959.1
ENST00000675144.1
ENST00000675769.1
CDS CAA 72 bp CGCGCTATATTCCAAATCTCCCAGAGGGTTCGTGTTTaGAGGTTTCGGCCTCTGCAGCTTCCCACGGGAGTG +
Preference number: 6 (lower is better)
Translates to: RAIFQISQRVRV*RFRPLQLPTGV
Trigger: CACTCCCGTGGGAAGCTGCAGAGGCCGAAACCTCAAAACACGAACCCTCTGGGAGATTTGGAATATAGCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CAA 90 bp ATGAGCAGCATCACCACCCATCCCGACCAGGCATCCAGCAGGCTCTaGATGAACTCCCATATGGACTCCTTGCTCTTGCTGGTGATCTTC +
Preference number: 6 (lower is better)
Translates to: MSSITTHPDQASSRL*MNSHMDSLLLLVIF
Trigger: GAAGATCACCAGCAAGAGCAAGGAGTCCATATGGGAGTTCATCAAGAGCCTGCTGGATGCCTGGTCGGGATGGGTGGTGATGCTGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000675144.1
ENST00000675769.1
CDS GCA 72 bp CTACCAGCTCTATCGTCACAGCTCTTCAGAAGCCTGTaGCTGAGCTCATGCCTTGGGCATGCCTTATTGATG +
Preference number: 6 (lower is better)
Translates to: LPALSSQLFRSL*LSSCLGHALLM
Trigger: CATCAATAAGGCATGCCCAAGGCATGAGCTCAGGCACAGGCTTCTGAAGAGCTGTGACGATAGAGCTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CAA 72 bp TCCAGCAGGCTCTTGATGAACTCCCATATGGACTCCTaGCTCTTGCTGGTGATCTTCCTGTGTCTGTCGGTG +
Preference number: 6 (lower is better)
Translates to: SSRLLMNSHMDS*LLLVIFLCLSV
Trigger: CACCGACAGACACAGGAAGATCACCAGCAAGAGCAAGGAGTCCATATGGGAGTTCATCAAGAGCCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380829.5
ENST00000380833.9
ENST00000421085.7
ENST00000454850.1
ENST00000675144.1
ENST00000675769.1
CDS GCA 72 bp TCGTCACAGCTCTTCAGAAGCCTGTGCCTGAGCTCATaGCTTGGGCATGCCTTATTGATGATGGATTTTAGG +
Preference number: 6 (lower is better)
Translates to: SSQLFRSLCLSS*LGHALLMMDFR
Trigger: CCTAAAATCCATCATCAATAAGGCATGCCCAAGGCATGAGCTCAGGCACAGGCTTCTGAAGAGCTGTGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CCA 72 bp GTCAAATCCGGTATAGTAAGAAAACTCTGCTCTGTGTaGAAAGGCTACCAGCTCTATCGTCACAGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: VKSGIVRKLCSV*KGYQLYRHSSS
Trigger: TGAAGAGCTGTGACGATAGAGCTGGTAGCCTTTCCACACAGAGCAGAGTTTTCTTACTATACCGGATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674959.1
CDS CCA 72 bp ATAAAGTTAAAACGCTACCGAAATCTCCTGCTCCTTTaGGTTGAGGGTCTAATGGAGGCAGAAACTGACAAG +
Preference number: 6 (lower is better)
Translates to: IKLKRYRNLLLL*VEGLMEAETDK
Trigger: CTTGTCAGTTTCTGCCTCCATTAGACCCTCAACCCAAAGGAGCAGGAGATTTCGGTAGCGTTTTAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380833.9