RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLCN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000109572

Ensembl transcript IDs: ENST00000347613.8, ENST00000360642.7, ENST00000502998.1, ENST00000504131.6, ENST00000507875.5, ENST00000512813.5, ENST00000513761.6, ENST00000515420.1, ENST00000613795.4

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTAATCCCTCTAGAAATAGGGACTGATAATGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGT +
Preference number: 1 (lower is better)
Translates to: VIPLEIGTDNVSLQC*SNRPGARGLCCHLC
Trigger: ACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTATTTCTAGAGGGATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR TCA 90 bp CAGCTTTCACTGACAAATGGGGGCGCTAAACCATTGCTGGTGGTATaGACATCCTGCTGTCAATCCAGCATCTATCTACTCTTCTATTGC +
Preference number: 1 (lower is better)
Translates to: QLSLTNGGAKPLLVV*TSCCQSSIYLLFYC
Trigger: GCAATAGAAGAGTAGATAGATGCTGGATTGACAGCAGGATGTTCATACCACCAGCAATGGTTTAGCGCCCCCATTTGTCAGTGAAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513761.6
3UTR TCA 90 bp AAACCAAGCTTCATTGTTTTCGGTTTTGAGCCACACGGCACACAATaGGAGATTTCGTTCTCGCTTCCTTCGAGACTTTACCTGTTTGAT +
Preference number: 1 (lower is better)
Translates to: KPSFIVFGFEPHGTQ*EISFSLPSRLYLFD
Trigger: ATCAAACAGGTAAAGTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGAAGCTTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR GCA 90 bp CATCCTGCTGTCAATCCAGCATCTATCTACTCTTCTATTGCTCCTTaGTTGCAAAGTGTAGAAATGCTTTGTAACCTGAGAGAAGCATTA +
Preference number: 1 (lower is better)
Translates to: HPAVNPASIYSSIAP*LQSVEMLCNLREAL
Trigger: TAATGCTTCTCTCAGGTTACAAAGCATTTCTACACTTTGCAAGCAAGGAGCAATAGAAGAGTAGATAGATGCTGGATTGACAGCAGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
3UTR CCA 90 bp GTGCATGTGTACTGTTCCAAGCATTTAGTGATGGTACAAACTACATaGTTAATGGCACAAGAAACACTCCCTTCTTGTGATGAAACCTCA +
Preference number: 1 (lower is better)
Translates to: VHVYCSKHLVMVQTT*LMAQETLPSCDETS
Trigger: TGAGGTTTCATCACAAGAAGGGAGTGTTTCTTGTGCCATTAACCATGTAGTTTGTACCATCACTAAATGCTTGGAACAGTACACATGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR TCA 90 bp CCTTCTTGTGATGAAACCTCAGTAAAATCACAGTACATCTCAATATaGGAAAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTT +
Preference number: 1 (lower is better)
Translates to: PSCDETSVKSQYISI*ERTASKGYTDLKRL
Trigger: AAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTGTGATTTTACTGAGGTTTCATCACAAGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR CCA 90 bp AGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTaGAGATATACAGAACTATCATTTAGAAATGATTTTACTCTGGAT +
Preference number: 1 (lower is better)
Translates to: SLAIRCTQANTLKTS*RYTELSFRNDFTLD
Trigger: ATCCAGAGTAAAATCATTTCTAAATGATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRRHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCGTTGAGGCGCAAGCCTaGACTATCAGGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLVEAQA*TIRHIL
Trigger: GAGGATGTGCCTGATAGTGCAGGCTTGCGCCTCAAC...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSRHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: ATGQVLEDSAVISVEAQASTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARRHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: EDSAVISVEAQACTIRHIAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCGTTGAGGCGCAAGCCTaGACTATCAGGCACATCCTC +
Preference number: 2 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRVEAQA*TIRHIL
Trigger: GAGGATGTGCCTGATAGTGCAGGCTTGCGCCTCAAC...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATGGCGGGAGTATCACTTaGGCCCAGGTGGTCAACGCT +
Preference number: 2 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYGGSIT*AQVVNA
Trigger: AGCGTTGACCACCTGGGCTCAAGTGATACTCCCGCC...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTACATCCTCAGCTGAATaGATCCAGTGCAGAACAATA +
Preference number: 2 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCTSSAE*IQCRTI
Trigger: TATTGTTCTGCACTGGATGCATTCAGCTGAGGATGT...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: EDSAVISVEAQACTIRHIICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCCAGGTGGTCAACGCTaGAGTGAGCCAAGACCATGC +
Preference number: 2 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYPGGQR*SEPRPC
Trigger: GCATGGTCTTGGCTCACTGCAGCGTTGACCACCTGG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATTGCCAGCTACTTGGGTaGCTGAGGCGGGAGTATCAC +
Preference number: 2 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYCQLLG*LRREYH
Trigger: GTGATACTCCCGCCTCAGCCACCCAAGTAGCTGGCA...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATGGTCAACGCTGCAGTaGGCCAAGACCATGCCCCAC +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEWSTLQ*AKTMPH
Trigger: GTGGGGCATGGTCTTGGCTCACTGCAGCGTTGACCA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATGCAGATTGCTTGAGCTaGGGAGTTGAGACCAGCCTG +
Preference number: 2 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYADCLS*GVETSL
Trigger: CAGGCTGGTCTCAACTCCTCAGCTCAAGCAATCTGC...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACAAAAGGGCAAGACCTTaGAGTTTTATAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDKRARP*SFIDGS
Trigger: TGAGCCATCTATAAAACTGCAAGGTCTTGCCCTTTT...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCAGTGAGCCAAGACCATaGCCCACTGCACTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSSEPRP*PTALQP
Trigger: TGGCTGGAGTGCAGTGGGGCATGGTCTTGGCTCACT...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCGTAGTGCCAGCTACTTaGGTGGCTGAGGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSVVPAT*VAEAGV
Trigger: TACTCCCGCCTCAGCCACCCAAGTAGCTGGCACTAC...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCGAGTTGAGACCAGCCTaGGCAGCATGGCAAAACCCC +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSELRPA*AAWQNP
Trigger: GGGGTTTTGCCATGCTGCCCAGGCTGGTCTCAACTC...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCATTGTTTTCGGTTTTaGGCCACACGGCACACAATG +
Preference number: 2 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWHCFRF*ATRHTM
Trigger: CATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCGCAGGCAGATTGCTTaGGCTGAGGAGTTGAGACCA +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSRRQIA*AEELRP
Trigger: TGGTCTCAACTCCTCAGCTCAAGCAATCTGCCTGCG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: IMCLCNVGATGQVLEDSASTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAACCAGGTGGTCAACGCTaGAGTGAGCCAAGACCATGC +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEPGGQR*SEPRPC
Trigger: GCATGGTCTTGGCTCACTGCAGCGTTGACCACCTGG...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAGTAGTGCCAGCTACTTaGGTGGCTGAGGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEVVPAT*VAEAGV
Trigger: TACTCCCGCCTCAGCCACCCAAGTAGCTGGCACTAC...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR CAA 90 bp CACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACTTTACCTGTTaGATGAGCCTTTGTTGTGGTGCATGTGTACTGTTCCAAGCATTT +
Preference number: 2 (lower is better)
Translates to: HNERFRSRFLRDFTC*MSLCCGACVLFQAF
Trigger: AAATGCTTGGAACAGTACACATGCACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCTGCTGTCATCTCTGTTaGGGCGCAAGCCTGCACTAT +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSCCHLC*GASLHY
Trigger: ATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCA...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 2 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGGGTTTATGTGCACACTaGATCACAGAGAGAGAACCA +
Preference number: 2 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWGLCAH*ITEREP
Trigger: TGGTTCTCTCTCTGTGATCCAGTGTGCACATAAACC...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 2 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQRHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCTGATAATGTGTCTTTaGAATGTTGGAGCAACAGGC +
Preference number: 2 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWLIMCL*NVGATG
Trigger: GCCTGTTGCTCCAACATTGCAAAGACACATTATCAG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCATTGTTTTCGGTTTTaGGCCACACGGCACACAATG +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSHCFRF*ATRHTM
Trigger: CATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCTTCAGTGTCAGCCATaGGATATCTTGAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWLQCQP*DILRKE
Trigger: TTCTTTTCTCAAGATATCTCATGGCTGACACTGAAG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 2 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTCTGATAATGTGTCTTTaGAATGTTGGAGCAACAGGC +
Preference number: 2 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSLIMCL*NVGATG
Trigger: GCCTGTTGCTCCAACATTGCAAAGACACATTATCAG...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCGAGCCTTTGTTGTGGTaGATGTGTACTGTTCCAAGC +
Preference number: 2 (lower is better)
Translates to: NKLHVKFYEAICKETDLSEPLLW*MCTVPS
Trigger: GCTTGGAACAGTACACATGCACCACAACAAAGGCTC...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTGCCTTTGCCAATTGTaGATTAAGGCTGTGATTAAA +
Preference number: 2 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWCLCQL*IKAVIK
Trigger: TTTAATCACAGCCTTAATTCACAATTGGCAAAGGCA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCTTCAGTGTCAGCCATaGGATATCTTGAGAAAAGAA +
Preference number: 2 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYLQCQP*DILRKE
Trigger: TTCTTTTCTCAAGATATCTCATGGCTGACACTGAAG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCAGTACATCTCAATATaGGAAAGGACTGCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYQYISI*ERTASK
Trigger: TTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR TCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAAACCGATTTGTCCTTTaGAGGCTATTAACTCAGGAC +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVENRFVL*RLLTQD
Trigger: GTCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTT...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR GCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAACATCCTCAGCTGAATaGATCCAGTGCAGAACAATA +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVETSSAE*IQCRTI
Trigger: TATTGTTCTGCACTGGATGCATTCAGCTGAGGATGT...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR CAA 90 bp AGGCAGATAGCACAGCTAAGAATGTTTCCCAAAATCCCGAAAATTTaGCTCAACTTTCAATCCTCATTCTTATATGGCTTCATGATCTTA +
Preference number: 2 (lower is better)
Translates to: RQIAQLRMFPKIPKI*LNFQSSFLYGFMIL
Trigger: TAAGATCATGAAGCCATATAAGAATGAGGATTGAAAGTTGAGCAAAATTTTCGGGATTTTGGGAAACATTCTTAGCTGTGCTATCTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAATGGTACAAACTACATaGTTAATGGCACAAGAAACA +
Preference number: 2 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEMVQTT*LMAQET
Trigger: TGTTTCTTGTGCCATTAACCATGTAGTTTGTACCAT...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTCTGCTGTCATCTCTGTaGAGGCGCAAGCCTGCACTA +
Preference number: 3 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSLLSSL*RRKPAL
Trigger: TAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAG...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCTGCTGTCATCTCTGTaGAGGCGCAAGCCTGCACTA +
Preference number: 3 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLLLSSL*RRKPAL
Trigger: TAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAG...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR TCA 72 bp CTGACAAATGGGGGCGCTAAACCATTGCTGGTGGTATaGACATCCTGCTGTCAATCCAGCATCTATCTACTC +
Preference number: 3 (lower is better)
Translates to: LTNGGAKPLLVV*TSCCQSSIYLL
Trigger: GAGTAGATAGATGCTGGATTGACAGCAGGATGTTCATACCACCAGCAATGGTTTAGCGCCCCCATTTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513761.6
3UTR-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCTTCCACCAGCATTATTaGCAAACCATGTTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: EDSAVISVEAQACTIRHIFHQHY*QTMLQK
Trigger: TTTTTGCAACATGGTTTGCAAATAATGCTGGTGGAA...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTGTGTCTTTGCAATGTaGGAGCAACAGGCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWCVFAM*EQQARC
Trigger: GCACCTGGCCTGTTGCTCCAACATTGCAAAGACACA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR GCA 72 bp GCACTATCAGGCACATCCTCAGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGATACGCTGCTTTCTGTT +
Preference number: 3 (lower is better)
Translates to: ALSGTSSAECIQ*RTIGVDTLLSV
Trigger: AACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCTGATAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR TCA 72 bp AATGAAATCAGTTTTCTGTGGACCTGCAGCTTTCACTaGCAAATGGGGGCGCTAAACCATTGCTGGTGGTAT +
Preference number: 3 (lower is better)
Translates to: NEISFLWTCSFH*QMGALNHCWWY
Trigger: ATACCACCAGCAATGGTTTAGCGCCCCCATTTGTCAGTGAAAGCTGCAGGTCCACAGAAAACTGATTTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513761.6
3UTR-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTTTGATGAGCCTTTGTaGTGGTGCATGTGTACTGTT +
Preference number: 3 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLFDEPL*WCMCTV
Trigger: AACAGTACACATGCACCACAACAAAGGCTCATCAAA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR TCA 72 bp TTCATTGTTTTCGGTTTTGAGCCACACGGCACACAATaGGAGATTTCGTTCTCGCTTCCTTCGAGACTTTAC +
Preference number: 3 (lower is better)
Translates to: FIVFGFEPHGTQ*EISFSLPSRLY
Trigger: GTAAAGTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGATATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCGAGACTTTACCTGTTaGATGAGCCTTTGTTGTGGT +
Preference number: 3 (lower is better)
Translates to: NKLHVKFYEAICKETDLSRDFTC*MSLCCG
Trigger: ACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR GCA 72 bp GTCAATCCAGCATCTATCTACTCTTCTATTGCTCCTTaGTTGCAAAGTGTAGAAATGCTTTGTAACCTGAGA +
Preference number: 3 (lower is better)
Translates to: VNPASIYSSIAP*LQSVEMLCNLR
Trigger: TCTCAGGTTACAAAGCATTTCTACACTTTGCAAGCAAGGAGCAATAGAAGAGTAGATAGATGCTGGATTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
3UTR-3UTR CAA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCTTTGATGAGCCTTTGTaGTGGTGCATGTGTACTGTT +
Preference number: 3 (lower is better)
Translates to: NKLHVKFYEAICKETDLSFDEPL*WCMCTV
Trigger: AACAGTACACATGCACCACAACAAAGGCTCATCAAA...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATTTGATGAGCCTTTGTaGTGGTGCATGTGTACTGTT +
Preference number: 3 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEFDEPL*WCMCTV
Trigger: AACAGTACACATGCACCACAACAAAGGCTCATCAAA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR-3UTR CAA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR TCA 72 bp GATGAAACCTCAGTAAAATCACAGTACATCTCAATATaGGAAAGGACTGCTTCAAAAGGATACACCGATTTA +
Preference number: 3 (lower is better)
Translates to: DETSVKSQYISI*ERTASKGYTDL
Trigger: TAAATCGGTGTATCCTTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTGTGATTTTACTGAGGTTTCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGGGACCGGACCGGCCCTaGCCCACGGAAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAGPDRP*PTEGEE
Trigger: CTCTTCCCCTTCCGTGGGTCAGGGCCGGTCCGGTCC...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR GCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCCACTGGGAAAGGGGCTaGAGGTTCCGGACCGGACCG +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQAHWERG*RFRTGP
Trigger: CGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTG...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGGGACCGGACCGGCCCTaGCCCACGGAAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRGPDRP*PTEGEE
Trigger: CTCTTCCCCTTCCGTGGGTCAGGGCCGGTCCGGTCC...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGTGGTCAACGCTGCAGTaGGCCAAGACCATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAWSTLQ*AKTMPH
Trigger: GTGGGGCATGGTCTTGGCTCACTGCAGCGTTGACCA...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCACTGGGAAAGGGGCTaGAGGTTCCGGACCGGACCG +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRHWERG*RFRTGP
Trigger: CGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTG...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR CCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCCAGCTACTTGGGTaGCTGAGGCGGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQACQLLG*LRREYH
Trigger: GTGATACTCCCGCCTCAGCCACCCAAGTAGCTGGCA...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGGCCATGCTGGGGATaGACAAGCCTGATGGAACCT +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQAWPCWG*TSLMEP
Trigger: AGGTTCCATCAGGCTTGTTCATCCCCAGCATGGCCA...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCCGCAGGCAGATTGCTTaGGCTGAGGAGTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQARRQIA*AEELRP
Trigger: TGGTCTCAACTCCTCAGCTCAAGCAATCTGCCTGCG...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGGACCGGACCGGCCCTaGCCCACGGAAGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSGPDRP*PTEGEE
Trigger: CTCTTCCCCTTCCGTGGGTCAGGGCCGGTCCGGTCC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR TCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCAGGAGGCGCCCATTGTaGGTTACAAGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIRRRPL*VTRHCL
Trigger: GAGGCAGTGCCTTGTAACTCACAATGGGCGCCTCCT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQAVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCGTAGTGCCAGCTACTTaGGTGGCTGAGGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIVVPAT*VAEAGV
Trigger: TACTCCCGCCTCAGCCACCCAAGTAGCTGGCACTAC...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGGTAGTGCCAGCTACTTaGGTGGCTGAGGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRVVPAT*VAEAGV
Trigger: TACTCCCGCCTCAGCCACCCAAGTAGCTGGCACTAC...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGAAAATTAGCTGGGCATaGTGGCGTGTGCCCGTAGTG +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAKISWA*WRVPVV
Trigger: CACTACGGGCACACGCCACCATGCCCAGCTAATTTT...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCCACACGGCACACAATaGGAGATTTCGTTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAPHGTQ*EISFSL
Trigger: AAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGG...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCCAACAGCACTGTTCGTaGTTGTACCACAACGCACTA +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQAQQHCS*LYHNAL
Trigger: TAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTG...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCTCCATTTAGCTGTCTaGTTATCTCGCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEALHLAV*LSRSSE
Trigger: CTCTGAGCTGCGAGATAATCAGACAGCTAAATGGAG...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: ATGQVLEDSAVISVEAQASVEHY*SGVLVC
Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGGTCAACGCTGCAGTaGGCCAAGACCATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLWSTLQ*AKTMPH
Trigger: GTGGGGCATGGTCTTGGCTCACTGCAGCGTTGACCA...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCGCCAAGGGTTCGACGTaGTGCTTTAGTTGCTCGAGA +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIAKGST*CFSCSR
Trigger: TCTCGAGCAACTAAAGCAGCACGTCGAACCCTTGGC...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347613.8
CDS-3UTR GCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTGTTGAGGCGCAAGCCTaGACTATCAGGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSVEAQA*TIRHIL
Trigger: GAGGATGTGCCTGATAGTGCAGGCTTGCGCCTCAAC...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTAGTGAGCCAAGACCATaGCCCACTGCACTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCSEPRP*PTALQP
Trigger: TGGCTGGAGTGCAGTGGGGCATGGTCTTGGCTCACT...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGGGGGATGAACAAGCCTaGTGGAACCTTGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRGDEQA*WNLDAK
Trigger: TTTGGCATCAAGGTTCCATCAGGCTTGTTCATCCCC...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEASVEHY*SGVLVC
Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGCGGGAGTATCACTTaGGCCCAGGTGGTCAACGCT +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARGGSIT*AQVVNA
Trigger: AGCGTTGACCACCTGGGCTCAAGTGATACTCCCGCC...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTGGGAAAGGGGCTaGAGGTTCCGGACCGGACCG +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPHWERG*RFRTGP
Trigger: CGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCTGAATATACTCCAATaGCTGCTGGACGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEALNILQ*LLDDQE
Trigger: TTCCTGATCGTCCAGCAGGCATTGGAGTATATTCAG...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGAACACACCCGAGAACTaGCAACGATACCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEANTPEN*QRYLLV
Trigger: AACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTT...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTGGAAGAGATGGGGTGTaGTGTGCAAAACACACCCGA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSGRDGV*CAKHTR
Trigger: TCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCC...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCAGTGAGCCAAGACCATaGCCCACTGCACTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLSEPRP*PTALQP
Trigger: TGGCTGGAGTGCAGTGGGGCATGGTCTTGGCTCACT...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTCCAGGTGGTCAACGCTaGAGTGAGCCAAGACCATGC +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSPGGQR*SEPRPC
Trigger: GCATGGTCTTGGCTCACTGCAGCGTTGACCACCTGG...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTCCAGGTGGTCAACGCTaGAGTGAGCCAAGACCATGC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAPGGQR*SEPRPC
Trigger: GCATGGTCTTGGCTCACTGCAGCGTTGACCACCTGG...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGGGGAGTAAAGTAGGATaGCTTTCAACCCACCACACC +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRGSKVG*LSTHHT
Trigger: GGTGTGGTGGGTTGAAAGCCATCCTACTTTACTCCC...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR CCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTGTAATTCCACCACTTTaGGAGGCTCACGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSVIPPL*EAHAGR
Trigger: TCTGCCTGCGTGAGCCTCCCAAAGTGGTGGAATTAC...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCCAGGACCCTCTGCTTaGCCTATGATTAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSPGPSA*PMINSA
Trigger: GGCAGAATTAATCATAGGTCAAGCAGAGGGTCCTGG...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGGCGGGAGTATCACTTaGGCCCAGGTGGTCAACGCT +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSGGSIT*AQVVNA
Trigger: AGCGTTGACCACCTGGGCTCAAGTGATACTCCCGCC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACGCAGATTGCTTGAGCTaGGGAGTTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDADCLS*GVETSL
Trigger: CAGGCTGGTCTCAACTCCTCAGCTCAAGCAATCTGC...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCGCAGGCAGATTGCTTaGGCTGAGGAGTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLRRQIA*AEELRP
Trigger: TGGTCTCAACTCCTCAGCTCAAGCAATCTGCCTGCG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCCACCACACCCTCCTTaGTCATTATTCCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLPPHPP*SLFRVT
Trigger: CGTGACCCGGAATAATGAGCAAGGAGGGTGTGGTGG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTCCCCACAATCCTTCCTaGGATCGCTCCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAPHNPS*DRSNGH
Trigger: ATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGG...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCCCCACAATCCTTCCTaGGATCGCTCCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLPHNPS*DRSNGH
Trigger: ATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCCTGGCACTTTCTATTaGAATTGTCAGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAPGTFY*NCQVSS
Trigger: AGAAGAGACCTGACAATTGCAATAGAAAGTGCCAGG...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTAGATGGGGTGTGCTGTaGAAAACACACCCGAGAACT +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSRWGVL*KTHPRT
Trigger: AGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCT...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGGAAGAGATGGGGTGTaGTGTGCAAAACACACCCGA +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCGRDGV*CAKHTR
Trigger: TCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGACATCCTCAGCTGAATaGATCCAGTGCAGAACAATA +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEATSSAE*IQCRTI
Trigger: TATTGTTCTGCACTGGATGCATTCAGCTGAGGATGT...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGTTGAGGCGCAAGCCTaGACTATCAGGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSVEAQA*TIRHIL
Trigger: GAGGATGTGCCTGATAGTGCAGGCTTGCGCCTCAAC...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGAGCAACAGGCCAGGTaGTCGAGGACTCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGAREQQAR*SRTLLS
Trigger: TGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTC...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGGCGAACTAGAACACTaGGAAAGGGGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAGELEH*ERGCRF
Trigger: GAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCC...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTCCACCGAAGAAAGCCTaGCACAGCGAAAACTATCGC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAPPKKA*HSENYR
Trigger: GCGATAGTTTTCGCTGTGTCAGGCTTTCTTCGGTGG...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCCCAGGGTGGTATGAGTaGATTCTTCTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIPGWYE*ILLLHP
Trigger: TGGATGCAAAAGAAGAATTCACTCATACCACCCTGG...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTGCAGCCAGGGTGGTATaGGTGAATTCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSAARVV*VNSSFA
Trigger: TGCAAAAGAAGAATTCACTCATACCACCCTGGCTGC...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTAGGAGGCGCCCATTGTaGGTTACAAGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSRRRPL*VTRHCL
Trigger: GAGGCAGTGCCTTGTAACTCACAATGGGCGCCTCCT...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHISVEHY*SGVLVC
Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCTCTCTCCTCATCTGTaGGATTCAGTTGAACATTAT +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEALSPHL*DSVEHY
Trigger: ATAATGTTCAACTGAATCTCACAGATGAGGAGAGAG...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSARHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTTGCTGTCATCTCTGTTaGGGCGCAAGCCTGCACTAT +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSACCHLC*GASLHY
Trigger: ATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCA...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCTCCAGAGGATGGCAGTaGAAGATCAGAGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHISRGWQ*KIRERF
Trigger: AAACCTTTCTCTGATCTTTCACTGCCATCCTCTGGA...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTGGTCAACGCTGCAGTaGGCCAAGACCATGCCCCAC +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHWSTLQ*AKTMPH
Trigger: GTGGGGCATGGTCTTGGCTCACTGCAGCGTTGACCA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGACGCAGGCAGATTGCTTaGGCTGAGGAGTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARRRQIA*AEELRP
Trigger: TGGTCTCAACTCCTCAGCTCAAGCAATCTGCCTGCG...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGGCTATGAAGAAAACTTaGAGTCTGTCAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAAMKKT*SLSKER
Trigger: TCTCTCCTTTGACAGACTTCAAGTTTTCTTCATAGC...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTAAGAAGAAGAGATGCTaGCACCCTTGCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSKKKRC*HPCPFS
Trigger: TGAGAATGGGCAAGGGTGTCAGCATCTCTTCTTCTT...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCATATACTCCAATGCCTaGTGGACGATCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIIYSNA*WTIRNV
Trigger: GACATTCCTGATCGTCCAGCAGGCATTGGAGTATAT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTAAGGGTTCGACGTGCTaGTTTAGTTGCTCGAGATGC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCKGSTC*FSCSRC
Trigger: GCATCTCGAGCAACTAAAGCAGCACGTCGAACCCTT...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347613.8
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGAGCAACAGGCCAGGTaGTCGAGGACTCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSEQQAR*SRTLLS
Trigger: TGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTTACTCCAATGCCTGCTaGACGATCAGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSYSNAC*TIRNVI
Trigger: GATGACATTCCTGATCGTCCAGCAGGCATTGGAGTA...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTTTCTGCTGGAAGAGATaGGGTGTGCTGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSFCWKR*GVLCKT
Trigger: TGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAA...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTTCTTGGTTTGCCGTCTaGGCCATATGCCGGAGGATA +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSASWFAV*AICRRI
Trigger: TATCCTCCGGCATATGGCCCAGACGGCAAACCAAGA...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTGCCAGCTACTTGGGTaGCTGAGGCGGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRCQLLG*LRREYH
Trigger: GTGATACTCCCGCCTCAGCCACCCAAGTAGCTGGCA...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGAGTTGAGACCAGCCTaGGCAGCATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLELRPA*AAWQNP
Trigger: GGGGTTTTGCCATGCTGCCCAGGCTGGTCTCAACTC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGACCACCGAAGAAAGCCTaGCACAGCGAAAACTATCGC +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARPPKKA*HSENYR
Trigger: GCGATAGTTTTCGCTGTGTCAGGCTTTCTTCGGTGG...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACCCAGGACCCTCTGCTTaGCCTATGATTAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDPGPSA*PMINSA
Trigger: GGCAGAATTAATCATAGGTCAAGCAGAGGGTCCTGG...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGACATTATGTAGTTCATaGTATAAGAACCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEATLCSS*YKNQDP
Trigger: AGGGTCCTGGTTCTTATATCATGAACTACATAATGT...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGGGGATGAACAAGCCTaGTGGAACCTTGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSGDEQA*WNLDAK
Trigger: TTTGGCATCAAGGTTCCATCAGGCTTGTTCATCCCC...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGCAGCCAGGGTGGTATaGGTGAATTCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCAARVV*VNSSFA
Trigger: TGCAAAAGAAGAATTCACTCATACCACCCTGGCTGC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGATGCTGTCATCTCTGTTaGGGCGCAAGCCTGCACTAT +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARCCHLC*GASLHY
Trigger: ATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCA...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTTGTAGTTCGACTCGCTaGAGCAACTGGGTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSCSSTR*SNWVLP
Trigger: TGGAAGAACCCAGTTGCTTCAGCGAGTCGAACTACA...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613795.4
CDS-3UTR TCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGCAGATTGCTTGAGCTaGGGAGTTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLADCLS*GVETSL
Trigger: CAGGCTGGTCTCAACTCCTCAGCTCAAGCAATCTGC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCCACCACACCCTCCTTaGTCATTATTCCGGGTCACG +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSPPHPP*SLFRVT
Trigger: CGTGACCCGGAATAATGAGCAAGGAGGGTGTGGTGG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCCCCACAATCCTTCCTaGGATCGCTCCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSPHNPS*DRSNGH
Trigger: ATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCATAAATGCCTTCCCTaGCAAAGGCATCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLHKCLP*QRHLQP
Trigger: GGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTCATAAATGCCTTCCCTaGCAAAGGCATCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAHKCLP*QRHLQP
Trigger: GGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATG...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTAGATGGGGTGTGCTGTaGAAAACACACCCGAGAACT +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSARWGVL*KTHPRT
Trigger: AGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGGCTCATGTCAAGAATaGTTCGAAGCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCGSCQE*FEASMA
Trigger: GGCCATTGAAGCTTCGAAGCATTCTTGACATGAGCC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGTTGAGGCGCAAGCCTaGACTATCAGGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLVEAQA*TIRHIL
Trigger: GAGGATGTGCCTGATAGTGCAGGCTTGCGCCTCAAC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGAGCAACAGGCCAGGTaGTCGAGGACTCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHEQQAR*SRTLLS
Trigger: TGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCTGATAATGTGTCTTTaGAATGTTGGAGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRLIMCL*NVGATG
Trigger: GCCTGTTGCTCCAACATTGCAAAGACACATTATCAG...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGAGCCTTTGTTGTGGTaGATGTGTACTGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCEPLLW*MCTVPS
Trigger: GCTTGGAACAGTACACATGCACCACAACAAAGGCTC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACCCAGGTGGTCAACGCTaGAGTGAGCCAAGACCATGC +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHPGGQR*SEPRPC
Trigger: GCATGGTCTTGGCTCACTGCAGCGTTGACCACCTGG...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGGCGAACTAGAACACTaGGAAAGGGGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSGELEH*ERGCRF
Trigger: GAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGCTTCGAAGCTTCAATaGCCGAGGACTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARASKLQ*PRTFCW
Trigger: CCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGC...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGAAGAACTCCTCCAATTaGTGCACCAAAAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRKNSSN*CTKSYR
Trigger: TCTGTAGCTTTTGGTGCACCAATTGGAGGAGTTCTT...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTGATGAGCCTTTGTTGTaGTGCATGTGTACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSDEPLL*CMCTVP
Trigger: TGGAACAGTACACATGCACCACAACAAAGGCTCATC...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGTAGTGCCAGCTACTTaGGTGGCTGAGGCGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHVVPAT*VAEAGV
Trigger: TACTCCCGCCTCAGCCACCCAAGTAGCTGGCACTAC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGAGTTGAGACCAGCCTaGGCAGCATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHELRPA*AAWQNP
Trigger: GGGGTTTTGCCATGCTGCCCAGGCTGGTCTCAACTC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTAAACCATTGCTGGTaGTATGAACATCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSLNHCW*YEHPAV
Trigger: GACAGCAGGATGTTCATACCACCAGCAATGGTTTAG...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGCGCTAAACCATTGCTaGTGGTATGAACATCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCALNHC*WYEHPA
Trigger: AGCAGGATGTTCATACCACCAGCAATGGTTTAGCGC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGACCAGGACCCTCTGCTTaGCCTATGATTAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARPGPSA*PMINSA
Trigger: GGCAGAATTAATCATAGGTCAAGCAGAGGGTCCTGG...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTGGCCATGCTGGGGATaGACAAGCCTGATGGAACCT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPWPCWG*TSLMEP
Trigger: AGGTTCCATCAGGCTTGTTCATCCCCAGCATGGCCA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCGCAGCCAGGGTGGTATaGGTGAATTCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLAARVV*VNSSFA
Trigger: TGCAAAAGAAGAATTCACTCATACCACCCTGGCTGC...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTTTGTCAGGTCTCTTCTaGGGGCAAATCCCACTAATC +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSLSGLF*GQIPLI
Trigger: GATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAA...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACTTGTCAGGTCTCTTCTaGGGGCAAATCCCACTAATC +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDLSGLF*GQIPLI
Trigger: GATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAA...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCCTCTCTCCTCATCTGTaGGATTCAGTTGAACATTAT +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHILSPHL*DSVEHY
Trigger: ATAATGTTCAACTGAATCTCACAGATGAGGAGAGAG...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTAAGACAATCCCATTGTaGGTTACAAGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSKTIPL*VTRHCL
Trigger: GAGGCAGTGCCTTGTAACTCACAATGGGATTGTCTT...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347613.8
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSRHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATGGCAGGAGGGTTGCTTaGGCCCAGGAGTTGGAGACC +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYGRRVA*AQELET
Trigger: GGTCTCCAACTCCTGGGCTCAAGCAACCCTCCTGCC...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504131.6
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGACCACACGGCACACAATaGGAGATTTCGTTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARPHGTQ*EISFSL
Trigger: AAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGG...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTACCTGCAGCTTTCACTaGCAAATGGGGGCGCTAAAC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSTCSFH*QMGALN
Trigger: GTTTAGCGCCCCCATTTGTCAGTGAAAGCTGCAGGT...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACCCCCACAATCCTTCCTaGGATCGCTCCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHPHNPS*DRSNGH
Trigger: ATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGG...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCAAAAGGGCAAGACCTTaGAGTTTTATAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIKRARP*SFIDGS
Trigger: TGAGCCATCTATAAAACTGCAAGGTCTTGCCCTTTT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTTCAAAGGGAAATTATTaGAGCCTGGTTGCTAGTGGC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCSKGNY*SLVASG
Trigger: GCCACTAGCAACCAGGCTGCAATAATTTCCCTTTGA...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613795.4
CDS-3UTR GCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGAGTCTAGCAATACGTTaGACACAGGCAAATACACTT +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRSLAIR*TQANTL
Trigger: AAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACT...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTTTTGGGGCTCCCTGTaGCAGGCATATCGGCCTACA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHFWGSL*QAYRPT
Trigger: TGTAGGCCGATATGCCTGGCACAGGGAGCCCCAAAA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGGCGAACTAGAACACTaGGAAAGGGGCTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPGELEH*ERGCRF
Trigger: GAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACCAACAGCACTGTTCGTaGTTGTACCACAACGCACTA +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDQQHCS*LYHNAL
Trigger: TAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTG...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTTACTCCAATGCCTGCTaGACGATCAGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAYSNAC*TIRNVI
Trigger: GATGACATTCCTGATCGTCCAGCAGGCATTGGAGTA...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTTACTCCAATGCCTGCTaGACGATCAGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSYSNAC*TIRNVI
Trigger: GATGACATTCCTGATCGTCCAGCAGGCATTGGAGTA...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGCTTCGAAGCTTCAATaGCCGAGGACTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSASKLQ*PRTFCW
Trigger: CCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTTCTTGGTTTGCCGTCTaGGCCATATGCCGGAGGATA +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSSWFAV*AICRRI
Trigger: TATCCTCCGGCATATGGCCCAGACGGCAAACCAAGA...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTCTTGGTTTGCCGTCTaGGCCATATGCCGGAGGATA +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLSWFAV*AICRRI
Trigger: TATCCTCCGGCATATGGCCCAGACGGCAAACCAAGA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTAAGAACTCCTCCAATTaGTGCACCAAAAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSKNSSN*CTKSYR
Trigger: TCTGTAGCTTTTGGTGCACCAATTGGAGGAGTTCTT...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGTGTCTTTGCAATGTTaGAGCAACAGGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARVSLQC*SNRPGA
Trigger: AGCACCTGGCCTGTTGCTCCAACATTGCAAAGACAC...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTTGGGTTCTTCCACAGTaGATGATGTCATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCWVLPQ*MMSSKG
Trigger: TCCCTTTGATGACATCATCCACTGTGGAAGAACCCA...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGATGGTACAAACTACATaGTTAATGGCACAAGAAACA +
Preference number: 4 (lower is better)
Translates to: VGATGQVLEDSAVISVEAMVQTT*LMAQET
Trigger: TGTTTCTTGTGCCATTAACCATGTAGTTTGTACCAT...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTGCCAGCTACTTGGGTaGCTGAGGCGGGAGTATCAC +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWCQLLG*LRREYH
Trigger: GTGATACTCCCGCCTCAGCCACCCAAGTAGCTGGCA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGTAATTCCACCACTTTaGGAGGCTCACGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLVIPPL*EAHAGR
Trigger: TCTGCCTGCGTGAGCCTCCCAAAGTGGTGGAATTAC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGTCTCTGAAGCAAGATaGGCAATTAAAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCVSEAR*AIKGGA
Trigger: TGCTCCTCCTTTAATTGCCCATCTTGCTTCAGAGAC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGATTTAAAAGATACCTaGCGTTTTCTACCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCDLKDT*RFLPQR
Trigger: CCTCTGCGGTAGAAAACGTCAGGTATCTTTTAAATC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR TCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACCCACCGAAGAAAGCCTaGCACAGCGAAAACTATCGC +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHPPKKA*HSENYR
Trigger: GCGATAGTTTTCGCTGTGTCAGGCTTTCTTCGGTGG...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCTTTCTTTTTGCTGTTaGTCCGTCTATGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCLSFCC*SVYAFL
Trigger: GAGAAAGGCATAGACGGATCAACAGCAAAAAGAAAG...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTCCAGGGTGGTATGAGTaGATTCTTCTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSPGWYE*ILLLHP
Trigger: TGGATGCAAAAGAAGAATTCACTCATACCACCCTGG...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTTCTGTGAGATTCAGTTaGACATTATTGAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCSVRFS*TLLKRG
Trigger: ACCCCGCTTCAATAATGTTCAACTGAATCTCACAGA...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTGCTGTCATCTCTGTTaGGGCGCAAGCCTGCACTAT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPCCHLC*GASLHY
Trigger: ATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGACATTGTTTTCGGTTTTaGGCCACACGGCACACAATG +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARHCFRF*ATRHTM
Trigger: CATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATG...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTTGTTCAAACCATCACTaGCCACTTCAAATATGGACG +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCCSNHH*PLQIWT
Trigger: CGTCCATATTTGAAGTGGTCAGTGATGGTTTGAACA...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGTGCCTTTGCCAATTGTaGATTAAGGCTGTGATTAAA +
Preference number: 4 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRCLCQL*IKAVIK
Trigger: TTTAATCACAGCCTTAATTCACAATTGGCAAAGGCA...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTAACCGATTTGTCCTTTaGAGGCTATTAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCNRFVL*RLLTQD
Trigger: GTCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTT...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAAAGAAGAAGAGATGCTaGCACCCTTGCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARKKKRC*HPCPFS
Trigger: TGAGAATGGGCAAGGGTGTCAGCATCTCTTCTTCTT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTGCGTAGGGCAGCAGTaGAGAGGGAGGACTGTTACA +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWCVGQQ*RGRTVT
Trigger: TGTAACAGTCCTCCCTCTTCACTGCTGCCCTACGCA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTATATACTCCAATGCCTaGTGGACGATCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAIYSNA*WTIRNV
Trigger: GACATTCCTGATCGTCCAGCAGGCATTGGAGTATAT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACCTGAATATACTCCAATaGCTGCTGGACGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDLNILQ*LLDDQE
Trigger: TTCCTGATCGTCCAGCAGGCATTGGAGTATATTCAG...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCTGAATATACTCCAATaGCTGCTGGACGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLLNILQ*LLDDQE
Trigger: TTCCTGATCGTCCAGCAGGCATTGGAGTATATTCAG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCCATAAATGCCTTCCCTaGCAAAGGCATCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRHKCLP*QRHLQP
Trigger: GGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATG...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTAGATGGGGTGTGCTGTaGAAAACACACCCGAGAACT +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLRWGVL*KTHPRT
Trigger: AGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCT...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGGAAGAGATGGGGTGTaGTGTGCAAAACACACCCGA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPGRDGV*CAKHTR
Trigger: TCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGGAAGAGATGGGGTGTaGTGTGCAAAACACACCCGA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHGRDGV*CAKHTR
Trigger: TCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCTGATAATGTGTCTTTaGAATGTTGGAGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCLIMCL*NVGATG
Trigger: GCCTGTTGCTCCAACATTGCAAAGACACATTATCAG...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCTTTTACGAAGCTATCTaGAAAGAAACCGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: EDSAVISVEAQACTIRHIFYEAI*KETDLS
Trigger: GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAA...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGGGAGTAAAGTAGGATaGCTTTCAACCCACCACACC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSGSKVG*LSTHHT
Trigger: GGTGTGGTGGGTTGAAAGCCATCCTACTTTACTCCC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGCTTCGAAGCTTCAATaGCCGAGGACTTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPASKLQ*PRTFCW
Trigger: CCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTCTTGGTTTGCCGTCTaGGCCATATGCCGGAGGATA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPSWFAV*AICRRI
Trigger: TATCCTCCGGCATATGGCCCAGACGGCAAACCAAGA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCTTGGTTTGCCGTCTaGGCCATATGCCGGAGGATA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHSWFAV*AICRRI
Trigger: TATCCTCCGGCATATGGCCCAGACGGCAAACCAAGA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCGATGAGCCTTTGTTGTaGTGCATGTGTACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLDEPLL*CMCTVP
Trigger: TGGAACAGTACACATGCACCACAACAAAGGCTCATC...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTCCTCTGCTTGACCTATaGTTAATTCTGCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAPLLDL*LILPMF
Trigger: AAACATGGGCAGAATTAATCATAGGTCAAGCAGAGG...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCCTCTGCTTGACCTATaGTTAATTCTGCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLPLLDL*LILPMF
Trigger: AAACATGGGCAGAATTAATCATAGGTCAAGCAGAGG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCCAGGACCCTCTGCTTaGCCTATGATTAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPPGPSA*PMINSA
Trigger: GGCAGAATTAATCATAGGTCAAGCAGAGGGTCCTGG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGGGGATGAACAAGCCTaGTGGAACCTTGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHGDEQA*WNLDAK
Trigger: TTTGGCATCAAGGTTCCATCAGGCTTGTTCATCCCC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTTTGTCAGGTCTCTTCTaGGGGCAAATCCCACTAATC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSLSGLF*GQIPLI
Trigger: GATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAA...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTTGTCAGGTCTCTTCTaGGGGCAAATCCCACTAATC +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLLSGLF*GQIPLI
Trigger: GATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATAGGAGGCGCCCATTGTaGGTTACAAGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYRRRPL*VTRHCL
Trigger: GAGGCAGTGCCTTGTAACTCACAATGGGCGCCTCCT...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGGCACATCCTCAGCTaGATGCATCCAGTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWRHILS*MHPVQN
Trigger: GTTCTGCACTGGATGCATTCAGCTGAGGATGTGCCT...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCAGTACATCTCAATATaGGAAAGGACTGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSQYISI*ERTASK
Trigger: TTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTG...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCTTCAGTGTCAGCCATaGGATATCTTGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCLQCQP*DILRKE
Trigger: TTCTTTTCTCAAGATATCTCATGGCTGACACTGAAG...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCATAAATGCCTTCCCTaGCAAAGGCATCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPHKCLP*QRHLQP
Trigger: GGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTAGATGGGGTGTGCTGTaGAAAACACACCCGAGAACT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPRWGVL*KTHPRT
Trigger: AGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCT...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGGCTCATGTCAAGAATaGTTCGAAGCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSGSCQE*FEASMA
Trigger: GGCCATTGAAGCTTCGAAGCATTCTTGACATGAGCC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTGTTGAGGCGCAAGCCTaGACTATCAGGCACATCCTC +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSVEAQA*TIRHIL
Trigger: GAGGATGTGCCTGATAGTGCAGGCTTGCGCCTCAAC...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACCTGATAATGTGTCTTTaGAATGTTGGAGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDLIMCL*NVGATG
Trigger: GCCTGTTGCTCCAACATTGCAAAGACACATTATCAG...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGAGCCTTTGTTGTGGTaGATGTGTACTGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLEPLLW*MCTVPS
Trigger: GCTTGGAACAGTACACATGCACCACAACAAAGGCTC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATAGTGAGCCAAGACCATaGCCCACTGCACTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYSEPRP*PTALQP
Trigger: TGGCTGGAGTGCAGTGGGGCATGGTCTTGGCTCACT...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCAACAGCACTGTTCGTaGTTGTACCACAACGCACTA +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSQQHCS*LYHNAL
Trigger: TAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCNSFNL*NSRATG
Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACGAAATTATTGCAGCCTaGTTGCTAGTGGCTACAATC +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDEIIAA*LLVATI
Trigger: GATTGTAGCCACTAGCAACCAGGCTGCAATAATTTC...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAAAATTAGCTGGGCATaGTGGCGTGTGCCCGTAGTG +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWKISWA*WRVPVV
Trigger: CACTACGGGCACACGCCACCATGCCCAGCTAATTTT...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGGGGGATGAACAAGCCTaGTGGAACCTTGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWGDEQA*WNLDAK
Trigger: TTTGGCATCAAGGTTCCATCAGGCTTGTTCATCCCC...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCCAGGGTGGTATGAGTaGATTCTTCTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSPGWYE*ILLLHP
Trigger: TGGATGCAAAAGAAGAATTCACTCATACCACCCTGG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCCAGGGTGGTATGAGTaGATTCTTCTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLPGWYE*ILLLHP
Trigger: TGGATGCAAAAGAAGAATTCACTCATACCACCCTGG...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGCAGCCAGGGTGGTATaGGTGAATTCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHAARVV*VNSSFA
Trigger: TGCAAAAGAAGAATTCACTCATACCACCCTGGCTGC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCTCTCTCCTCATCTGTaGGATTCAGTTGAACATTAT +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLLSPHL*DSVEHY
Trigger: ATAATGTTCAACTGAATCTCACAGATGAGGAGAGAG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCCACACGGCACACAATaGGAGATTTCGTTCTCGCTT +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWPHGTQ*EISFSL
Trigger: AAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTATGAAGAAAACTTaGAGTCTGTCAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSAMKKT*SLSKER
Trigger: TCTCTCCTTTGACAGACTTCAAGTTTTCTTCATAGC...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAAACCGATTTGTCCTTTaGAGGCTATTAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARNRFVL*RLLTQD
Trigger: GTCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTAAGAAGAAGAGATGCTaGCACCCTTGCCCATTCTCA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPKKKRC*HPCPFS
Trigger: TGAGAATGGGCAAGGGTGTCAGCATCTCTTCTTCTT...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCCATTGCTGGTGGTATaGACATCCTGCTGTCAATCC +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWPLLVV*TSCCQS
Trigger: GGATTGACAGCAGGATGTTCATACCACCAGCAATGG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR GCA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTCCCTAGAGTCAACCTaGTTCTGCCCAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLSLEST*FCPKLK
Trigger: TTTTAATTTTGGGCAGAAGCAGGTTGACTCTAGGGA...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR GCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCCCCACAATCCTTCCTaGGATCGCTCCAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYPHNPS*DRSNGH
Trigger: ATGGCCATTGGAGCGATCGCAGGAAGGATTGTGGGG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGACCTGGCACTTTCTATTaGAATTGTCAGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARPGTFY*NCQVSS
Trigger: AGAAGAGACCTGACAATTGCAATAGAAAGTGCCAGG...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTAACACACCCGAGAACTaGCAACGATACCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSNTPEN*QRYLLV
Trigger: AACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTT...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGGCTCATGTCAAGAATaGTTCGAAGCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPGSCQE*FEASMA
Trigger: GGCCATTGAAGCTTCGAAGCATTCTTGACATGAGCC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTAAAAGGGCAAGACCTTaGAGTTTTATAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAKRARP*SFIDGS
Trigger: TGAGCCATCTATAAAACTGCAAGGTCTTGCCCTTTT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACAGTCTAGCAATACGTTaGACACAGGCAAATACACTT +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDSLAIR*TQANTL
Trigger: AAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACT...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGGGGGCGCTAAACCATTaGTGGTGGTATGAACATCCT +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWGALNH*WWYEHP
Trigger: AGGATGTTCATACCACCAGCAATGGTTTAGCGCCCC...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTTCTGCTGGAAGAGATaGGGTGTGCTGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHFCWKR*GVLCKT
Trigger: TGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGGTTTATGTGCACACTaGATCACAGAGAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLGLCAH*ITEREP
Trigger: TGGTTCTCTCTCTGTGATCCAGTGTGCACATAAACC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCGTCTCTGAAGCAAGATaGGCAATTAAAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRVSEAR*AIKGGA
Trigger: TGCTCCTCCTTTAATTGCCCATCTTGCTTCAGAGAC...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTACATTATGTAGTTCATaGTATAAGAACCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSTLCSS*YKNQDP
Trigger: AGGGTCCTGGTTCTTATATCATGAACTACATAATGT...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCTGGCCATGCTGGGGATaGACAAGCCTGATGGAACCT +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSWPCWG*TSLMEP
Trigger: AGGTTCCATCAGGCTTGTTCATCCCCAGCATGGCCA...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCCAGGGTGGTATGAGTaGATTCTTCTTTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPPGWYE*ILLLHP
Trigger: TGGATGCAAAAGAAGAATTCACTCATACCACCCTGG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAAGGAGGCGCCCATTGTaGGTTACAAGGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVERRRPL*VTRHCL
Trigger: GAGGCAGTGCCTTGTAACTCACAATGGGCGCCTCCT...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTCTGTGAGATTCAGTTaGACATTATTGAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRSVRFS*TLLKRG
Trigger: ACCCCGCTTCAATAATGTTCAACTGAATCTCACAGA...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATTGCTGTCATCTCTGTTaGGGCGCAAGCCTGCACTAT +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYCCHLC*GASLHY
Trigger: ATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCA...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTCAGTACATCTCAATATaGGAAAGGACTGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSQYISI*ERTASK
Trigger: TTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTG...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCGCAGATTGCTTGAGCTaGGGAGTTGAGACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFADCLS*GVETSL
Trigger: CAGGCTGGTCTCAACTCCTCAGCTCAAGCAATCTGC...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTAACCGATTTGTCCTTTaGAGGCTATTAACTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLNRFVL*RLLTQD
Trigger: GTCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTT...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACATATACTCCAATGCCTaGTGGACGATCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHIYSNA*WTIRNV
Trigger: GACATTCCTGATCGTCCAGCAGGCATTGGAGTATAT...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTAGATGGGGTGTGCTGTaGAAAACACACCCGAGAACT +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSRWGVL*KTHPRT
Trigger: AGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCT...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCACATCCTCAGCTGAATaGATCCAGTGCAGAACAATA +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRTSSAE*IQCRTI
Trigger: TATTGTTCTGCACTGGATGCATTCAGCTGAGGATGT...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAAAAAGGGCAAGACCTTaGAGTTTTATAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARKRARP*SFIDGS
Trigger: TGAGCCATCTATAAAACTGCAAGGTCTTGCCCTTTT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARNSFNL*NSRATG
Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGGTTTATGTGCACACTaGATCACAGAGAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPGLCAH*ITEREP
Trigger: TGGTTCTCTCTCTGTGATCCAGTGTGCACATAAACC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGGTTTATGTGCACACTaGATCACAGAGAGAGAACCA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHGLCAH*ITEREP
Trigger: TGGTTCTCTCTCTGTGATCCAGTGTGCACATAAACC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGTCTCTGAAGCAAGATaGGCAATTAAAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPVSEAR*AIKGGA
Trigger: TGCTCCTCCTTTAATTGCCCATCTTGCTTCAGAGAC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR CAA 72 bp AGATTTCGTTCTCGCTTCCTTCGAGACTTTACCTGTTaGATGAGCCTTTGTTGTGGTGCATGTGTACTGTTC +
Preference number: 4 (lower is better)
Translates to: RFRSRFLRDFTC*MSLCCGACVLF
Trigger: GAACAGTACACATGCACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCGAAGGAAGCGAGAACGAAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGATTTAAAAGATACCTaGCGTTTTCTACCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHDLKDT*RFLPQR
Trigger: CCTCTGCGGTAGAAAACGTCAGGTATCTTTTAAATC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCCTCTGCTTGACCTATaGTTAATTCTGCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPPLLDL*LILPMF
Trigger: AAACATGGGCAGAATTAATCATAGGTCAAGCAGAGG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGTGGCCATGCTGGGGATaGACAAGCCTGATGGAACCT +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQWPCWG*TSLMEP
Trigger: AGGTTCCATCAGGCTTGTTCATCCCCAGCATGGCCA...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTCTGTGAGATTCAGTTaGACATTATTGAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPSVRFS*TLLKRG
Trigger: ACCCCGCTTCAATAATGTTCAACTGAATCTCACAGA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCTCTCTCCTCATCTGTaGGATTCAGTTGAACATTAT +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSLSPHL*DSVEHY
Trigger: ATAATGTTCAACTGAATCTCACAGATGAGGAGAGAG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTCATTGTTTTCGGTTTTaGGCCACACGGCACACAATG +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSHCFRF*ATRHTM
Trigger: CATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATG...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGATGCCTTTGCCAATTGTaGATTAAGGCTGTGATTAAA +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARCLCQL*IKAVIK
Trigger: TTTAATCACAGCCTTAATTCACAATTGGCAAAGGCA...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTCCCTAGAGTCAACCTaGTTCTGCCCAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRSLEST*FCPKLK
Trigger: TTTTAATTTTGGGCAGAAGCAGGTTGACTCTAGGGA...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGCTGCCTTTGGATTCTaGATCTGTTTCAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHAAFGF*ICFKPR
Trigger: TCTAGGTTTGAAACAGATGCAGAATCCAAAGGCAGC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTTTCCTCATCACTACTTaGACTTGTTATACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAFLITT*TCYTVV
Trigger: TACAACAGTATAACAAGTGCAAGTAGTGATGAGGAA...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTAGTGCCAGGCATAACTaGCATATAGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSSARHN*HIAEYT
Trigger: AGTATATTCAGCTATATGGCAGTTATGCCTGGCACT...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCAGTGCCAGGCATAACTaGCATATAGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRSARHN*HIAEYT
Trigger: AGTATATTCAGCTATATGGCAGTTATGCCTGGCACT...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCCTGGCACTTTCTATTaGAATTGTCAGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPPGTFY*NCQVSS
Trigger: AGAAGAGACCTGACAATTGCAATAGAAAGTGCCAGG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTGGCTCATGTCAAGAATaGTTCGAAGCTTCAATGGCC +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSGSCQE*FEASMA
Trigger: GGCCATTGAAGCTTCGAAGCATTCTTGACATGAGCC...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGATCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACACGTGCTGCTTTAGTTaGTCGAGATGCTCTAATATG +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHTCCFS*SRCSNM
Trigger: CATATTAGAGCATCTCGAGCAACTAAAGCAGCACGT...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347613.8
CDS-3UTR CCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRNSFNL*NSRATG
Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTAAGAACTCCTCCAATTaGTGCACCAAAAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPKNSSN*CTKSYR
Trigger: TCTGTAGCTTTTGGTGCACCAATTGGAGGAGTTCTT...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTCGAGACATGGTACAAACTACATaGTTAATGGCACAAGAAACA +
Preference number: 4 (lower is better)
Translates to: VLSHTAHNERFRSRFLRDMVQTT*LMAQET
Trigger: TGTTTCTTGTGCCATTAACCATGTAGTTTGTACCAT...GTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCTCCATTTAGCTGTCTaGTTATCTCGCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYLHLAV*LSRSSE
Trigger: CTCTGAGCTGCGAGATAATCAGACAGCTAAATGGAG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCGGGGATGAACAAGCCTaGTGGAACCTTGATGCCAAA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFGDEQA*WNLDAK
Trigger: TTTGGCATCAAGGTTCCATCAGGCTTGTTCATCCCC...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCATTGTTTTCGGTTTTaGGCCACACGGCACACAATG +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYHCFRF*ATRHTM
Trigger: CATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCTAAAACTGAATCCATaGTCTAACTCGGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPLKLNP*SNSGVK
Trigger: CTTTACTCCCGAGTTAGAGCATGGATTCAGTTTTAG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACCTAAAACTGAATCCATaGTCTAACTCGGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHLKLNP*SNSGVK
Trigger: CTTTACTCCCGAGTTAGAGCATGGATTCAGTTTTAG...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCCTAGAGTCAACCTaGTTCTGCCCAAAATTAAAA +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHSLEST*FCPKLK
Trigger: TTTTAATTTTGGGCAGAAGCAGGTTGACTCTAGGGA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCATAAATGCCTTCCCTaGCAAAGGCATCTCCAACCC +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFHKCLP*QRHLQP
Trigger: GGGTTGGAGATGCCTTTGGCAGGGAAGGCATTTATG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCCTGGCACTTTCTATTaGAATTGTCAGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWPGTFY*NCQVSS
Trigger: AGAAGAGACCTGACAATTGCAATAGAAAGTGCCAGG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCATTTCTTCCATCCCTaGTGCAGCAAGCAAGGGAGA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFHFFHP*CSKQGR
Trigger: TCTCCCTTGCTTGCTGCAGCAGGGATGGAAGAAATG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613795.4
CDS-3UTR GCA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTTTTACGAAGCTATCTaGAAAGAAACCGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLFYEAI*KETDLS
Trigger: GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAAGAACTCCTCCAATTaGTGCACCAAAAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWKNSSN*CTKSYR
Trigger: TCTGTAGCTTTTGGTGCACCAATTGGAGGAGTTCTT...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAGTAATTCCACCACTTTaGGAGGCTCACGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEVIPPL*EAHAGR
Trigger: TCTGCCTGCGTGAGCCTCCCAAAGTGGTGGAATTAC...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCTCCATTTAGCTGTCTaGTTATCTCGCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFLHLAV*LSRSSE
Trigger: CTCTGAGCTGCGAGATAATCAGACAGCTAAATGGAG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR TCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTACATTATGTAGTTCATaGTATAAGAACCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPTLCSS*YKNQDP
Trigger: AGGGTCCTGGTTCTTATATCATGAACTACATAATGT...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCTTGTCAGGTCTCTTCTaGGGGCAAATCCCACTAATC +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSLSGLF*GQIPLI
Trigger: GATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAA...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTTGTTCAAACCATCACTaGCCACTTCAAATATGGACG +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSCSNHH*PLQIWT
Trigger: CGTCCATATTTGAAGTGGTCAGTGATGGTTTGAACA...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTCCACCAGCATTATTTaGAAACCATGTTGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPSTSII*KPCCKN
Trigger: GTTTTTGCAACATGGTTTGCAAATAATGCTGGTGGA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTCTTCTATTGCTCCTTaGTTGCAAAGTGTAGAAATG +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPSSIAP*LQSVEM
Trigger: CATTTCTACACTTTGCAAGCAAGGAGCAATAGAAGA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCAACAGCACTGTTCGTaGTTGTACCACAACGCACTA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFQQHCS*LYHNAL
Trigger: TAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCTACTCCAATGCCTGCTaGACGATCAGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFYSNAC*TIRNVI
Trigger: GATGACATTCCTGATCGTCCAGCAGGCATTGGAGTA...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATGATGAGCCTTTGTTGTaGTGCATGTGTACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYDEPLL*CMCTVP
Trigger: TGGAACAGTACACATGCACCACAACAAAGGCTCATC...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCGGCACAACAATTTCATaGTCTCCACTATTTCATTAT +
Preference number: 4 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRGTTIS*SPLFHY
Trigger: ATAATGAAATAGTGGAGACCATGAAATTGTTGTGCC...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATCTTTCTTTTTGCTGTTaGTCCGTCTATGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYLSFCC*SVYAFL
Trigger: GAGAAAGGCATAGACGGATCAACAGCAAAAAGAAAG...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGGCAGCCAGGGTGGTATaGGTGAATTCTTCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQAARVV*VNSSFA
Trigger: TGCAAAAGAAGAATTCACTCATACCACCCTGGCTGC...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCTCAGTTGAACATTATTaGAGCGGGGTCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFSVEHY*SGVLVC
Trigger: GCAAACCAAGACCCCGCTTCAATAATGTTCAACTGA...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATTGTTCAAACCATCACTaGCCACTTCAAATATGGACG +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYCSNHH*PLQIWT
Trigger: CGTCCATATTTGAAGTGGTCAGTGATGGTTTGAACA...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCATATACTCCAATGCCTaGTGGACGATCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFIYSNA*WTIRNV
Trigger: GACATTCCTGATCGTCCAGCAGGCATTGGAGTATAT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCTGAATATACTCCAATaGCTGCTGGACGATCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFLNILQ*LLDDQE
Trigger: TTCCTGATCGTCCAGCAGGCATTGGAGTATATTCAG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTAGTGCCAGGCATAACTaGCATATAGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSSARHN*HIAEYT
Trigger: AGTATATTCAGCTATATGGCAGTTATGCCTGGCACT...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCAACACACCCGAGAACTaGCAACGATACCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFNTPEN*QRYLLV
Trigger: AACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCAACACACCCGAGAACTaGCAACGATACCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSNTPEN*QRYLLV
Trigger: AACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTT...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAGAGCCTTTGTTGTGGTaGATGTGTACTGTTCCAAGC +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEEPLLW*MCTVPS
Trigger: GCTTGGAACAGTACACATGCACCACAACAAAGGCTC...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACATTGGTAAATTAATTTaGCAATTAGCCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHIGKLI*QLARHN
Trigger: GTTGTGCCTGGCTAATTGGCAAATTAATTTACCAAT...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGCAACAGCACTGTTCGTaGTTGTACCACAACGCACTA +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQQQHCS*LYHNAL
Trigger: TAGTGCGTTGTGGTACAACCACGAACAGTGCTGTTG...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATACTCCAATGCCTGCTaGACGATCAGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEYSNAC*TIRNVI
Trigger: GATGACATTCCTGATCGTCCAGCAGGCATTGGAGTA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATTCTGCTGGAAGAGATaGGGTGTGCTGTGCAAAACA +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEFCWKR*GVLCKT
Trigger: TGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTGGCACAACAATTTCATaGTCTCCACTATTTCATTAT +
Preference number: 4 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPGTTIS*SPLFHY
Trigger: ATAATGAAATAGTGGAGACCATGAAATTGTTGTGCC...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCTTTCTTTTTGCTGTTaGTCCGTCTATGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFLSFCC*SVYAFL
Trigger: GAGAAAGGCATAGACGGATCAACAGCAAAAAGAAAG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCTTTCTTTTTGCTGTTaGTCCGTCTATGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSLSFCC*SVYAFL
Trigger: GAGAAAGGCATAGACGGATCAACAGCAAAAAGAAAG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTACATTATGTAGTTCATaGTATAAGAACCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSTLCSS*YKNQDP
Trigger: AGGGTCCTGGTTCTTATATCATGAACTACATAATGT...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCTCTGTGAGATTCAGTTaGACATTATTGAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFSVRFS*TLLKRG
Trigger: ACCCCGCTTCAATAATGTTCAACTGAATCTCACAGA...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATCCAGAGGATGGCAGTaGAAGATCAGAGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVESRGWQ*KIRERF
Trigger: AAACCTTTCTCTGATCTTTCACTGCCATCCTCTGGA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCGCTGCCTTTGGATTCTaGATCTGTTTCAAACCTAGA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFAAFGF*ICFKPR
Trigger: TCTAGGTTTGAAACAGATGCAGAATCCAAAGGCAGC...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAATATACTCCAATGCCTaGTGGACGATCAGGAATGTC +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVEIYSNA*WTIRNV
Trigger: GACATTCCTGATCGTCCAGCAGGCATTGGAGTATAT...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAAAACACACCCGAGAACTaGCAACGATACCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVENTPEN*QRYLLV
Trigger: AACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTT...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGCCTCTGCTTGACCTATaGTTAATTCTGCCCATGTTT +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQPLLDL*LILPMF
Trigger: AAACATGGGCAGAATTAATCATAGGTCAAGCAGAGG...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGTCTGTGAGATTCAGTTaGACATTATTGAAGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQSVRFS*TLLKRG
Trigger: ACCCCGCTTCAATAATGTTCAACTGAATCTCACAGA...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCTCTCTCCTCATCTGTaGGATTCAGTTGAACATTAT +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSLSPHL*DSVEHY
Trigger: ATAATGTTCAACTGAATCTCACAGATGAGGAGAGAG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCTTCAGTGTCAGCCATaGGATATCTTGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSLQCQP*DILRKE
Trigger: TTCTTTTCTCAAGATATCTCATGGCTGACACTGAAG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCGCTATGAAGAAAACTTaGAGTCTGTCAAAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSAMKKT*SLSKER
Trigger: TCTCTCCTTTGACAGACTTCAAGTTTTCTTCATAGC...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCAGTGCCAGGCATAACTaGCATATAGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFSARHN*HIAEYT
Trigger: AGTATATTCAGCTATATGGCAGTTATGCCTGGCACT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGGCTGAATGCATCCAGTaGAGAACAATAGGAGTTGAT +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQAECIQ*RTIGVD
Trigger: ATCAACTCCTATTGTTCTGCACTGGATGCATTCAGC...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGACATCCTCAGCTGAATaGATCCAGTGCAGAACAATA +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQTSSAE*IQCRTI
Trigger: TATTGTTCTGCACTGGATGCATTCAGCTGAGGATGT...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGCTGATAATGTGTCTTTaGAATGTTGGAGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQLIMCL*NVGATG
Trigger: GCCTGTTGCTCCAACATTGCAAAGACACATTATCAG...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCAGTCTAGCAATACGTTaGACACAGGCAAATACACTT +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSSLAIR*TQANTL
Trigger: AAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACT...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTATTGGTAAATTAATTTaGCAATTAGCCAGGCACAAC +
Preference number: 4 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSIGKLI*QLARHN
Trigger: GTTGTGCCTGGCTAATTGGCAAATTAATTTACCAAT...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCAATAGTTTTAATCTCTaGAATTCCAGAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFNSFNL*NSRATG
Trigger: GCCTGTGGCTCTGGAATTCCAGAGATTAAAACTATT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR CAA 72 bp GCACAGCTAAGAATGTTTCCCAAAATCCCGAAAATTTaGCTCAACTTTCAATCCTCATTCTTATATGGCTTC +
Preference number: 4 (lower is better)
Translates to: AQLRMFPKIPKI*LNFQSSFLYGF
Trigger: GAAGCCATATAAGAATGAGGATTGAAAGTTGAGCAAAATTTTCGGGATTTTGGGAAACATTCTTAGCTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCACATTATGTAGTTCATaGTATAAGAACCAGGACCCT +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFTLCSS*YKNQDP
Trigger: AGGGTCCTGGTTCTTATATCATGAACTACATAATGT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCAGTACATCTCAATATaGGAAAGGACTGCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFQYISI*ERTASK
Trigger: TTTTGAAGCAGTCCTTTCTCATATTGAGATGTACTG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAACTAAAACTGAATCCATaGTCTAACTCGGGAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVELKLNP*SNSGVK
Trigger: CTTTACTCCCGAGTTAGAGCATGGATTCAGTTTTAG...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR GCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGAGTGCCAGGCATAACTaGCATATAGCTGAATATACT +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQSARHN*HIAEYT
Trigger: AGTATATTCAGCTATATGGCAGTTATGCCTGGCACT...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGAAAAGGGCAAGACCTTaGAGTTTTATAGATGGCTCA +
Preference number: 4 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQKRARP*SFIDGS
Trigger: TGAGCCATCTATAAAACTGCAAGGTCTTGCCCTTTT...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATGGCACAACAATTTCATaGTCTCCACTATTTCATTAT +
Preference number: 4 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYGTTIS*SPLFHY
Trigger: ATAATGAAATAGTGGAGACCATGAAATTGTTGTGCC...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR TCA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATGCCTTTGCCAATTGTaGATTAAGGCTGTGATTAAA +
Preference number: 4 (lower is better)
Translates to: ISQAQQFHGLHYFIILVECLCQL*IKAVIK
Trigger: TTTAATCACAGCCTTAATTCACAATTGGCAAAGGCA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCTTCCTCATCACTACTTaGACTTGTTATACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFFLITT*TCYTVV
Trigger: TACAACAGTATAACAAGTGCAAGTAGTGATGAGGAA...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR GCA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCTTCCTCATCACTACTTaGACTTGTTATACTGTTGTA +
Preference number: 4 (lower is better)
Translates to: NKLHVKFYEAICKETDLSFLITT*TCYTVV
Trigger: TACAACAGTATAACAAGTGCAAGTAGTGATGAGGAA...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR GCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCATTTGCAAACCATGTTaGAAAAACCCGGCTTTTATA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFICKPC*KNPAFI
Trigger: TATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAAT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CCA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCATGGTACAAACTACATaGTTAATGGCACAAGAAACA +
Preference number: 4 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFMVQTT*LMAQET
Trigger: TGTTTCTTGTGCCATTAACCATGTAGTTTGTACCAT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
3UTR CAA 72 bp TTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCTTaGAAGGCTATTAACTCAGGACAATTAAGTTATCCA +
Preference number: 4 (lower is better)
Translates to: FTKLSAKKPICP*KAINSGQLSYP
Trigger: TGGATAACTTAATTGTCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS CCA 90 bp CACCCTCCTTGCTCATTATTCCGGGTCACGGGCGAACTAGAACACTaGGAAAGGGGCTGCAGGTTCCGGACCGGACCGGCCCTGACCCAC +
Preference number: 5 (lower is better)
Translates to: HPPCSLFRVTGELEH*ERGCRFRTGPALTH
Trigger: GTGGGTCAGGGCCGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCCCGTGACCCGGAATAATGAGCAAGGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000512813.5
ENST00000513761.6
CDS GCA 90 bp TCATTATTCCGGGTCACGGGCGAACTAGAACACTGGGAAAGGGGCTaGAGGTTCCGGACCGGACCGGCCCTGACCCACGGAAGGGGAAGA +
Preference number: 5 (lower is better)
Translates to: SLFRVTGELEHWERG*RFRTGPALTHGRGR
Trigger: TCTTCCCCTTCCGTGGGTCAGGGCCGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCCCGTGACCCGGAATAATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000512813.5
ENST00000513761.6
CDS-3UTR CAA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCTGCTGTCATCTCTGTaGAGGCGCAAGCCTGCACTA +
Preference number: 5 (lower is better)
Translates to: VGATGQVLEDSAVISVEALLSSL*RRKPAL
Trigger: TAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAG...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCAGGCGGGAGTATCACTaGAGCCCAGGTGGTCAACGC +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHIRREYH*SPGGQR
Trigger: GCGTTGACCACCTGGGCTCAAGTGATACTCCCGCCT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCCCACCACACCCTCCTaGCTCATTATTCCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRPTTPS*LIIPGH
Trigger: GTGACCCGGAATAATGAGCAAGGAGGGTGTGGTGGG...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR CAA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTAGGCGGGAGTATCACTaGAGCCCAGGTGGTCAACGC +
Preference number: 5 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSRREYH*SPGGQR
Trigger: GCGTTGACCACCTGGGCTCAAGTGATACTCCCGCCT...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCCAGCACTGTTCGTGGTaGTACCACAACGCACTAAGG +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHIQHCSW*YHNALR
Trigger: CCTTAGTGCGTTGTGGTACAACCACGAACAGTGCTG...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGTCATCCACTGTCATATaGTCCTGTGTCAGGACAGCT +
Preference number: 5 (lower is better)
Translates to: VGATGQVLEDSAVISVEASSTVI*SCVRTA
Trigger: AGCTGTCCTGACACAGGACAATATGACAGTGGATGA...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCCGAGACTTTACCTGTTaGATGAGCCTTTGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: ATGQVLEDSAVISVEAQARDFTC*MSLCCG
Trigger: ACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCG...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTAGGCGGGAGTATCACTaGAGCCCAGGTGGTCAACGC +
Preference number: 5 (lower is better)
Translates to: LIMCLCNVGATGQVLEDSRREYH*SPGGQR
Trigger: GCGTTGACCACCTGGGCTCAAGTGATACTCCCGCCT...AGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCCGGTGGGACTTTTATaGTCCTCCTTCAAACACGGG +
Preference number: 5 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSPVGLL*SSFKHG
Trigger: CCCGTGTTTGAAGGAGGACAATAAAAGTCCCACCGG...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR CAA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCGAGGTTACGAAAATTTaGCCCGGTGGGACTTTTATT +
Preference number: 5 (lower is better)
Translates to: ATGQVLEDSAVISVEAQAEVTKI*PGGTFI
Trigger: AATAAAAGTCCCACCGGGCAAAATTTTCGTAACCTC...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR CAA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCTGCTGTCATCTCTGTaGAGGCGCAAGCCTGCACTA +
Preference number: 5 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCLLSSL*RRKPAL
Trigger: TAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAG...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS GCA 90 bp CGAAGCTTCAATGGCCGAGGACTTTCTGCTGGAAGAGATGGGGTGTaGTGTGCAAAACACACCCGAGAACTGCCAACGATACCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: RSFNGRGLSAGRDGV*CAKHTRELPTIPSC
Trigger: ACAAGAAGGTATCGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS CCA 90 bp AATGCTTCGAAGCTTCAATGGCCGAGGACTTTCTGCTGGAAGAGATaGGGTGTGCTGTGCAAAACACACCCGAGAACTGCCAACGATACC +
Preference number: 5 (lower is better)
Translates to: NASKLQWPRTFCWKR*GVLCKTHPRTANDT
Trigger: GGTATCGTTGGCAGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTCTTTCTTTTTGCTGTaGATCCGTCTATGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: ATGQVLEDSAVISVEAQASFFLL*IRLCLS
Trigger: AGAAAGGCATAGACGGATCAACAGCAAAAAGAAAGA...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCTCATCCACTGTCATATaGTCCTGTGTCAGGACAGCT +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHISSTVI*SCVRTA
Trigger: AGCTGTCCTGACACAGGACAATATGACAGTGGATGA...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTCTGCTGTCATCTCTGTaGAGGCGCAAGCCTGCACTA +
Preference number: 5 (lower is better)
Translates to: IMCLCNVGATGQVLEDSALLSSL*RRKPAL
Trigger: TAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAG...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS GCA 90 bp GCTCATGTCAAGAATGCTTCGAAGCTTCAATGGCCGAGGACTTTCTaGTGGAAGAGATGGGGTGTGCTGTGCAAAACACACCCGAGAACT +
Preference number: 5 (lower is better)
Translates to: AHVKNASKLQWPRTF*WKRWGVLCKTHPRT
Trigger: AGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGCATTCTTGACATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGTCTTTCTTTTTGCTGTaGATCCGTCTATGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: VGATGQVLEDSAVISVEASFFLL*IRLCLS
Trigger: AGAAAGGCATAGACGGATCAACAGCAAAAAGAAAGA...CGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTTCATCCACTGTCATATaGTCCTGTGTCAGGACAGCT +
Preference number: 5 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSSSTVI*SCVRTA
Trigger: AGCTGTCCTGACACAGGACAATATGACAGTGGATGA...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTTCCACCAGCATTATTaGCAAACCATGTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ATGQVLEDSAVISVEAQAFHQHY*QTMLQK
Trigger: TTTTTGCAACATGGTTTGCAAATAATGCTGGTGGAA...GGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTCTGTTGAGGCTGTTTGATGAGCCTTaGTTGTGGTGCATGTGTACT +
Preference number: 5 (lower is better)
Translates to: MLEQQARCSRTLLSSLLRLFDEP*LWCMCT
Trigger: AGTACACATGCACCACAACAAAGGCTCATCAAACAG...CCTCAACAGAGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCTCATTGTTTTCGGTTTaGAGCCACACGGCACACAAT +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHISLFSV*SHTAHN
Trigger: ATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTGAGATGCTGACACCCTaGCCCATTCTCATCATACCT +
Preference number: 5 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCEMLTP*PILIIP
Trigger: AGGTATGATGAGAATGGGCAAGGGTGTCAGCATCTC...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS GCA 90 bp GCCTTCCCTGCCAAAGGCATCTCCAACCCATTTACTGGTCATGACTaGAGCCATAAGGGGAACAATATATTCCAAGCCTCCAGTAAGCTC +
Preference number: 5 (lower is better)
Translates to: AFPAKGISNPFTGHD*SHKGNNIFQASSKL
Trigger: GAGCTTACTGGAGGCTTGGAATATATTGTTCCCCTTATGGCTGCAGTCATGACCAGTAAATGGGTTGGAGATGCCTTTGGCAGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACCCCACCACACCCTCCTaGCTCATTATTCCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHPTTPS*LIIPGH
Trigger: GTGACCCGGAATAATGAGCAAGGAGGGTGTGGTGGG...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCAAGCCTGATGGAACCTaGATGCCAAAAGTGAATACT +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHIKPDGT*MPKVNT
Trigger: AGTATTCACTTTTGGCATCAAGGTTCCATCAGGCTT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGGGAGACAGTCATTCTaGTCACACCACCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAGRQSF*SHHLSM
Trigger: CATGCTTAGGTGGTGTGACAAGAATGACTGTCTCCC...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGAGATGCTGACACCCTaGCCCATTCTCATCATACCT +
Preference number: 5 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAEMLTP*PILIIP
Trigger: AGGTATGATGAGAATGGGCAAGGGTGTCAGCATCTC...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS GCA 90 bp CAAGGAGGCGCCAAGGGTTCGACGTGCTGCTTTAGTTGCTCGAGATaGTCTAATATGTTCTTCTTTGTGATGATCCCCAAGACAATCCCA +
Preference number: 5 (lower is better)
Translates to: QGGAKGSTCCFSCSR*SNMFFFVMIPKTIP
Trigger: TGGGATTGTCTTGGGGATCATCACAAAGAAGAACATATTAGAGCATCTCGAGCAACTAAAGCAGCACGTCGAACCCTTGGCGCCTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347613.8
CDS-3UTR CAA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCCCACCACACCCTCCTaGCTCATTATTCCGGGTCAC +
Preference number: 5 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWPTTPS*LIIPGH
Trigger: GTGACCCGGAATAATGAGCAAGGAGGGTGTGGTGGG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CAA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCCGGTGGGACTTTTATaGTCCTCCTTCAAACACGGG +
Preference number: 5 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSPVGLL*SSFKHG
Trigger: CCCGTGTTTGAAGGAGGACAATAAAAGTCCCACCGG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CAA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAATCGGTGGCTGTTTTTaGCGCTGCCTTTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARIGGCF*RCLWIL
Trigger: CAGAATCCAAAGGCAGCGCAAAAAACAGCCACCGAT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347613.8
ENST00000513761.6
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCCGTTTGTGCTATACTTaGGAAAGAGGTAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHIRLCYT*ERGRKR
Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACAAACG...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTGTGTCTTTGCAATGTaGGAGCAACAGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLCVFAM*EQQARC
Trigger: GCACCTGGCCTGTTGCTCCAACATTGCAAAGACACA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTCATCTTTTGATGAGCCTTTGTaGTGGTGCATGTGTACTGTT +
Preference number: 5 (lower is better)
Translates to: VFAMLEQQARCSRTLLSSFDEPL*WCMCTV
Trigger: AACAGTACACATGCACCACAACAAAGGCTCATCAAA...AGATGACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GAGGACTCTGCTGTCATCTCTGTTGAGGCGCAAGCCTGCACTATCAGGCACATCAAACCGATTTGTCCTTaGAAGGCTATTAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: EDSAVISVEAQACTIRHIKPICP*KAINSG
Trigger: TCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTTT...GATGTGCCTGATAGTGCAGGCTTGCGCCTCAACAGAGATGACAGCAGAGTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCAGCACTGTTCGTGGTaGTACCACAACGCACTAAGG +
Preference number: 5 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPQHCSW*YHNALR
Trigger: CCTTAGTGCGTTGTGGTACAACCACGAACAGTGCTG...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTGGGAGACAGTCATTCTaGTCACACCACCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSGRQSF*SHHLSM
Trigger: CATGCTTAGGTGGTGTGACAAGAATGACTGTCTCCC...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TCATTGTTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCGGGAGACAGTCATTCTaGTCACACCACCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: SLFSVLSHTAHNERFRSRGRQSF*SHHLSM
Trigger: CATGCTTAGGTGGTGTGACAAGAATGACTGTCTCCC...GCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTTCCTGGCACTTTCTATaGCAATTGTCAGGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: IMCLCNVGATGQVLEDSASWHFL*QLSGLF
Trigger: GAAGAGACCTGACAATTGCAATAGAAAGTGCCAGGA...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTGTGTCTTTGCAATGTaGGAGCAACAGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHCVFAM*EQQARC
Trigger: GCACCTGGCCTGTTGCTCCAACATTGCAAAGACACA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCCTGTTTGATGAGCCTTaGTTGTGGTGCATGTGTACT +
Preference number: 5 (lower is better)
Translates to: TDNVSLQCWSNRPGARGLLFDEP*LWCMCT
Trigger: AGTACACATGCACCACAACAAAGGCTCATCAAACAG...GAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGAGATGCTGACACCCTaGCCCATTCTCATCATACCT +
Preference number: 5 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLEMLTP*PILIIP
Trigger: AGGTATGATGAGAATGGGCAAGGGTGTCAGCATCTC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTAAGCCTGATGGAACCTaGATGCCAAAAGTGAATACT +
Preference number: 5 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAKPDGT*MPKVNT
Trigger: AGTATTCACTTTTGGCATCAAGGTTCCATCAGGCTT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAAAGCCTGATGGAACCTaGATGCCAAAAGTGAATACT +
Preference number: 5 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARKPDGT*MPKVNT
Trigger: AGTATTCACTTTTGGCATCAAGGTTCCATCAGGCTT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTCATCCACTGTCATATaGTCCTGTGTCAGGACAGCT +
Preference number: 5 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPSSTVI*SCVRTA
Trigger: AGCTGTCCTGACACAGGACAATATGACAGTGGATGA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTCCTGGCACTTTCTATaGCAATTGTCAGGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLSWHFL*QLSGLF
Trigger: GAAGAGACCTGACAATTGCAATAGAAAGTGCCAGGA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp AATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTGTTATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: NVSLQCWSNRPGARGLCCYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...ACAGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp AAGGACTGCTTCAAAAGGATACACCGATTTAAAGAGGCTTTGTTACAGCTCAGTTGTGTCTTTGCAATGTaGGAGCAACAGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: KDCFKRIHRFKEALLQLSCVFAM*EQQARC
Trigger: GCACCTGGCCTGTTGCTCCAACATTGCAAAGACACA...ACTGAGCTGTAACAAAGCCTCTTTAAATCGGTGTATCCTTTTGAAGCAGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTCGAGACTTTACCTGTTaGATGAGCCTTTGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSRDFTC*MSLCCG
Trigger: ACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCG...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTTCATTGTTTTCGGTTTaGAGCCACACGGCACACAAT +
Preference number: 5 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLSLFSV*SHTAHN
Trigger: ATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAGGACTCTGCTAAACCGATTTGTCCTTaGAAGGCTATTAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: IMCLCNVGATGQVLEDSAKPICP*KAINSG
Trigger: TCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTTT...AGCAGAGTCCTCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTATAATTATTACCTTTTaGGGGCTCCCTGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPIIITF*GLPVPG
Trigger: GCCTGGCACAGGGAGCCCCAAAAAGGTAATAATTAT...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CAA 90 bp TTTTCGGTTTTGAGCCACACGGCACACAATGAGAGATTTCGTTCTCGCTTCCTTGAGGTTACGAAAATTTaGCCCGGTGGGACTTTTATT +
Preference number: 5 (lower is better)
Translates to: FSVLSHTAHNERFRSRFLEVTKI*PGGTFI
Trigger: AATAAAAGTCCCACCGGGCAAAATTTTCGTAACCTC...AAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTCAAAACCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CAA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTGGCACTTTCTATaGCAATTGTCAGGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHSWHFL*QLSGLF
Trigger: GAAGAGACCTGACAATTGCAATAGAAAGTGCCAGGA...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATTGTGTCTTTGCAATGTaGGAGCAACAGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYCVFAM*EQQARC
Trigger: GCACCTGGCCTGTTGCTCCAACATTGCAAAGACACA...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTCATTGTTTTCGGTTTaGAGCCACACGGCACACAAT +
Preference number: 5 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPSLFSV*SHTAHN
Trigger: ATTGTGTGCCGTGTGGCTCAAAACCGAAAACAATGA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGAACTTACCACCCTCTTTaGGCAGTTCTATTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARTYHPL*AVLLAN
Trigger: ATTTGCTAATAGAACTGCCAAAAGAGGGTGGTAAGT...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CAA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATATCGGTGGCTGTTTTTaGCGCTGCCTTTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYIGGCF*RCLWIL
Trigger: CAGAATCCAAAGGCAGCGCAAAAAACAGCCACCGAT...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CAA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTTCTTTCTTTTTGCTGTaGATCCGTCTATGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSSFFLL*IRLCLS
Trigger: AGAAAGGCATAGACGGATCAACAGCAAAAAGAAAGA...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACAAGCCTGATGGAACCTaGATGCCAAAAGTGAATACT +
Preference number: 5 (lower is better)
Translates to: CRTIGVDTLLSVRREIPHKPDGT*MPKVNT
Trigger: AGTATTCACTTTTGGCATCAAGGTTCCATCAGGCTT...GTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATGGGAGACAGTCATTCTaGTCACACCACCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYGRQSF*SHHLSM
Trigger: CATGCTTAGGTGGTGTGACAAGAATGACTGTCTCCC...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATAGGGACTGATAATGTGTCTTTGCAATGTTGGAGCAACAGGCCAGGTGCTCGATTCCACCAGCATTATTaGCAAACCATGTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: IGTDNVSLQCWSNRPGARFHQHY*QTMLQK
Trigger: TTTTTGCAACATGGTTTGCAAATAATGCTGGTGGAA...TCGAGCACCTGGCCTGTTGCTCCAACATTGCAAAGACACATTATCAGTCCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTTTTGATGAGCCTTTGTaGTGGTGCATGTGTACTGTT +
Preference number: 5 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPFDEPL*WCMCTV
Trigger: AACAGTACACATGCACCACAACAAAGGCTCATCAAA...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGCGAGACTTTACCTGTTaGATGAGCCTTTGTTGTGGT +
Preference number: 5 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWRDFTC*MSLCCG
Trigger: ACCACAACAAAGGCTCATCAAACAGGTAAAGTCTCG...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCATCGGTGGCTGTTTTTaGCGCTGCCTTTGGATTCTG +
Preference number: 5 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFIGGCF*RCLWIL
Trigger: CAGAATCCAAAGGCAGCGCAAAAAACAGCCACCGAT...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CAA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGCAGCACTGTTCGTGGTaGTACCACAACGCACTAAGG +
Preference number: 5 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQQHCSW*YHNALR
Trigger: CCTTAGTGCGTTGTGGTACAACCACGAACAGTGCTG...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTTATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTCACTCCTTTCCTTCTTTCCACCAGCATTATTaGCAAACCATGTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: GVDTLLSVRREIPHSFPSFHQHY*QTMLQK
Trigger: TTTTTGCAACATGGTTTGCAAATAATGCTGGTGGAA...AGAAGGAAAGGAGTGAGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp CAGTGCAGAACAATAGGAGTTGATACGCTGCTTTCTGTTAGACGGGAAATACCTAAACCGATTTGTCCTTaGAAGGCTATTAACTCAGGA +
Preference number: 5 (lower is better)
Translates to: QCRTIGVDTLLSVRREIPKPICP*KAINSG
Trigger: TCCTGAGTTAATAGCCTTCAAAGGACAAATCGGTTT...AGGTATTTCCCGTCTAACAGAAAGCAGCGTATCAACTCCTATTGTTCTGCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp GTTCATAGTCTAGCAATACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGTCTTTCTTTTTGCTGTaGATCCGTCTATGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: VHSLAIRCTQANTLKTSWSFFLL*IRLCLS
Trigger: AGAAAGGCATAGACGGATCAACAGCAAAAAGAAAGA...CCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTATTGCTAGACTATGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGGGGAGACAGTCATTCTaGTCACACCACCTAAGCATG +
Preference number: 5 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQGRQSF*SHHLSM
Trigger: CATGCTTAGGTGGTGTGACAAGAATGACTGTCTCCC...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCTCCTGGCACTTTCTATaGCAATTGTCAGGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFSWHFL*QLSGLF
Trigger: GAAGAGACCTGACAATTGCAATAGAAAGTGCCAGGA...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TACGTTGCACACAGGCAAATACACTTAAGACGAGTTGGAGATATACAGAACTATTTTGATGAGCCTTTGTaGTGGTGCATGTGTACTGTT +
Preference number: 5 (lower is better)
Translates to: YVAHRQIHLRRVGDIQNYFDEPL*WCMCTV
Trigger: AACAGTACACATGCACCACAACAAAGGCTCATCAAA...ATAGTTCTGTATATCTCCAACTCGTCTTAAGTGTATTTGCCTGTGTGCAACGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCTGTTTGATGAGCCTTaGTTGTGGTGCATGTGTACT +
Preference number: 5 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFLFDEP*LWCMCT
Trigger: AGTACACATGCACCACAACAAAGGCTCATCAAACAG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCGAGGTTACGAAAATTTaGCCCGGTGGGACTTTTATT +
Preference number: 5 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFEVTKI*PGGTFI
Trigger: AATAAAAGTCCCACCGGGCAAAATTTTCGTAACCTC...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS-3UTR CAA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAATCCTGGCACTTTCTATaGCAATTGTCAGGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ISQAQQFHGLHYFIILVESWHFL*QLSGLF
Trigger: GAAGAGACCTGACAATTGCAATAGAAAGTGCCAGGA...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCCGTTTGTGCTATACTTaGGAAAGAGGTAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFRLCYT*ERGRKR
Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACAAACG...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ATTAGCCAGGCACAACAATTTCATGGTCTCCACTATTTCATTATTTTGGTTGAACGTTTGTGCTATACTTaGGAAAGAGGTAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: ISQAQQFHGLHYFIILVERLCYT*ERGRKR
Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACAAACG...TTCAACCAAAATAATGAAATAGTGGAGACCATGAAATTGTTGTGCCTGGCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGCGTTTGTGCTATACTTaGGAAAGAGGTAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQRLCYT*ERGRKR
Trigger: TCTTTTCCTACCTCTTTCCAAAGTATAGCACAAACG...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp ACCAGCATTATTTGCAAACCATGTTGCAAAAACCCGGCTTTTATATTTCCTTTCTATTTGCAAACCATGTaGCAAAAACCCGGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: TSIICKPCCKNPAFIFPFYLQTM*QKPGFY
Trigger: ATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATA...GAAAGGAAATATAAAAGCCGGGTTTTTGCAACATGGTTTGCAAATAATGCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS-3UTR CAA 90 bp AATAAACTCCATGTGAAGTTTTACGAAGCTATCTGCAAAGAAACCGATTTGTCCCATCTTAATCAAAGGTaGTTACTTACCACCCTCTTT +
Preference number: 5 (lower is better)
Translates to: NKLHVKFYEAICKETDLSHLNQR*LLTTLF
Trigger: AAAGAGGGTGGTAAGTAACAACCTTTGATTAAGATG...GGACAAATCGGTTTCTTTGCAGATAGCTTCGTAAAACTTCACATGGAGTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513761.6
CDS-3UTR CAA 90 bp TTAATACCAGATACAGCTAATCAGAATACTTCCTTCTCTTTACTGTCAAAGCAGTTCCACCAGCATTATTaGCAAACCATGTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: LIPDTANQNTSFSLLSKQFHQHY*QTMLQK
Trigger: TTTTTGCAACATGGTTTGCAAATAATGCTGGTGGAA...CTGCTTTGACAGTAAAGAGAAGGAAGTATTCTGATTAGCTGTATCTGGTATTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS TCA 72 bp GGGAAAGGGGCTGCAGGTTCCGGACCGGACCGGCCCTaGCCCACGGAAGGGGAAGAGAAGCGGCAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: GKGAAGSGPDRP*PTEGEEKRQES
Trigger: TGACTCCTGCCGCTTCTCTTCCCCTTCCGTGGGTCAGGGCCGGTCCGGTCCGGAACCTGCAGCCCCTTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000512813.5
CDS GCA 72 bp CGGGTCACGGGCGAACTAGAACACTGGGAAAGGGGCTaGAGGTTCCGGACCGGACCGGCCCTGACCCACGGA +
Preference number: 6 (lower is better)
Translates to: RVTGELEHWERG*RFRTGPALTHG
Trigger: TCCGTGGGTCAGGGCCGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCCCGTGACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000512813.5
ENST00000513761.6
CDS CCA 72 bp TGCTCATTATTCCGGGTCACGGGCGAACTAGAACACTaGGAAAGGGGCTGCAGGTTCCGGACCGGACCGGCC +
Preference number: 6 (lower is better)
Translates to: CSLFRVTGELEH*ERGCRFRTGPA
Trigger: GGCCGGTCCGGTCCGGAACCTGCAGCCCCTTTCCCAGTGTTCTAGTTCGCCCGTGACCCGGAATAATGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000512813.5
ENST00000513761.6
CDS CCA 72 bp AAGCTTCAATGGCCGAGGACTTTCTGCTGGAAGAGATaGGGTGTGCTGTGCAAAACACACCCGAGAACTGCC +
Preference number: 6 (lower is better)
Translates to: KLQWPRTFCWKR*GVLCKTHPRTA
Trigger: GGCAGTTCTCGGGTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS TCA 72 bp CTTAGCTGGTGGGCTGCTCAAAGCCCAAAATCATGCTaGCCTCCATATCTGGAACTTGGCTTGTTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: LSWWAAQSPKSC*PPYLELGLFFP
Trigger: GGGGAAGAACAAGCCAAGTTCCAGATATGGAGGTCAGCATGATTTTGGGCTTTGAGCAGCCCACCAGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502998.1
CDS GCA 72 bp AAGAATGCTTCGAAGCTTCAATGGCCGAGGACTTTCTaGTGGAAGAGATGGGGTGTGCTGTGCAAAACACAC +
Preference number: 6 (lower is better)
Translates to: KNASKLQWPRTF*WKRWGVLCKTH
Trigger: GTGTGTTTTGCACAGCACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS CCA 72 bp AAAAGGGCTCATGTCAAGAATGCTTCGAAGCTTCAATaGCCGAGGACTTTCTGCTGGAAGAGATGGGGTGTG +
Preference number: 6 (lower is better)
Translates to: KRAHVKNASKLQ*PRTFCWKRWGV
Trigger: CACACCCCATCTCTTCCAGCAGAAAGTCCTCGGCCATTGAAGCTTCGAAGCATTCTTGACATGAGCCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS TCA 72 bp AACCTAGCTACCCTCGGAGCTCCACCGAAGAAAGCCTaGCACAGCGAAAACTATCGCGATTTAAAAGATACC +
Preference number: 6 (lower is better)
Translates to: NLATLGAPPKKA*HSENYRDLKDT
Trigger: GGTATCTTTTAAATCGCGATAGTTTTCGCTGTGTCAGGCTTTCTTCGGTGGAGCTCCGAGGGTAGCTAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS GCA 72 bp GCCAAAGGCATCTCCAACCCATTTACTGGTCATGACTaGAGCCATAAGGGGAACAATATATTCCAAGCCTCC +
Preference number: 6 (lower is better)
Translates to: AKGISNPFTGHD*SHKGNNIFQAS
Trigger: GGAGGCTTGGAATATATTGTTCCCCTTATGGCTGCAGTCATGACCAGTAAATGGGTTGGAGATGCCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS GCA 72 bp GCCAAGGGTTCGACGTGCTGCTTTAGTTGCTCGAGATaGTCTAATATGTTCTTCTTTGTGATGATCCCCAAG +
Preference number: 6 (lower is better)
Translates to: AKGSTCCFSCSR*SNMFFFVMIPK
Trigger: CTTGGGGATCATCACAAAGAAGAACATATTAGAGCATCTCGAGCAACTAAAGCAGCACGTCGAACCCTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347613.8
CDS CAA 72 bp GCAGCTCAGAGACATAGCAAAATCGGTGGCTGTTTTTaGCGCTGCCTTTGGATTCTGCATCTGTTTCAAACC +
Preference number: 6 (lower is better)
Translates to: AAQRHSKIGGCF*RCLWILHLFQT
Trigger: GGTTTGAAACAGATGCAGAATCCAAAGGCAGCGCAAAAAACAGCCACCGATTTTGCTATGTCTCTGAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000513761.6
CDS TCA 72 bp CTTCGAGGTCTCATAACGTCAGCAGCCAGGGTGGTATaGGTGAATTCTTCTTTTGCATCCAAGAAAGGGTAT +
Preference number: 6 (lower is better)
Translates to: LRGLITSAARVV*VNSSFASKKGY
Trigger: ATACCCTTTCTTGGATGCAAAAGAAGAATTCACTCATACCACCCTGGCTGCTGACGTTATGAGACCTCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS TCA 72 bp TCCGTTTCTTCTCTCTCCTCATCTGTGAGATTCAGTTaGACATTATTGAAGCGGGGTCTTGGTTTGCCGTCT +
Preference number: 6 (lower is better)
Translates to: SVSSLSSSVRFS*TLLKRGLGLPS
Trigger: AGACGGCAAACCAAGACCCCGCTTCAATAATGTTCAACTGAATCTCACAGATGAGGAGAGAGAAGAAACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000513761.6
ENST00000613795.4
CDS TCA 72 bp TCCTGGCACTTTCTATTGCAATTGTCAGGTCTCTTCTaGGGGCAAATCCCACTAATCTCTGAGATTCTTTTG +
Preference number: 6 (lower is better)
Translates to: SWHFLLQLSGLF*GQIPLISEILL
Trigger: CAAAAGAATCTCAGAGATTAGTGGGATTTGCCCTCAGAAGAGACCTGACAATTGCAATAGAAAGTGCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS TCA 72 bp GTCAGGTCTCTTCTGAGGGCAAATCCCACTAATCTCTaGGATTCTTTTGACATTATGACAGGAAATCCATTG +
Preference number: 6 (lower is better)
Translates to: VRSLLRANPTNL*DSFDIMTGNPL
Trigger: CAATGGATTTCCTGTCATAATGTCAAAAGAATCTCAGAGATTAGTGGGATTTGCCCTCAGAAGAGACCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4
CDS GCA 72 bp GTCATTATGATTTTAAATATGAGTGCCAGGCATAACTaGCATATAGCTGAATATACTCCAATGCCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: VIMILNMSARHN*HIAEYTPMPAG
Trigger: TCCAGCAGGCATTGGAGTATATTCAGCTATATGGCAGTTATGCCTGGCACTCATATTTAAAATCATAATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000515420.1
ENST00000613795.4
CDS CAA 72 bp TCATTAATCATGTTTTCTATATCATCCACTGTCATATaGTCCTGTGTCAGGACAGCTAAGGGAGGATCATTC +
Preference number: 6 (lower is better)
Translates to: SLIMFSISSTVI*SCVRTAKGGSF
Trigger: GAATGATCCTCCCTTAGCTGTCCTGACACAGGACAATATGACAGTGGATGATATAGAAAACATGATTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347613.8
ENST00000360642.7
ENST00000504131.6
ENST00000507875.5
ENST00000513761.6
ENST00000613795.4